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The 10x team reviewed the Xenium notebook and found it very useful! (Btw, it's ready to merge #125).
They suggested to consider two improvements.
To show an example of how to use the multimodal segmentation as part of the analysis. The information is readily available in the SpatialData object, as shown here.
The text was updated successfully, but these errors were encountered:
They suggested also to consider using a different dataset for the example since we are using a preview one. I'd suggest to wait until a 5K Xenium Onboard Analysis 3.0 is available (I'll update the notebook in SpatialData when it's available and put the link here: Update Xenium dataset spatialdata-notebooks#110).
Very nice! Yes, I'd keep this to track the usage on the 5k dataset; but also, as pointed out by 10x, it would be nice to plot/use the new multimodal segmentation.
CC @giovp @LLehner
The 10x team reviewed the Xenium notebook and found it very useful! (Btw, it's ready to merge #125).
They suggested to consider two improvements.
SpatialData
object, as shown here.The text was updated successfully, but these errors were encountered: