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Releases: scverse/scvi-tools

scvi-tools 0.8.1

24 Dec 01:51
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See the release notes for changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 4 days typically)

Please report any issues on GitHub.

scvi-tools 0.8.0

17 Dec 20:07
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See the release notes for all the new functionality, and breaking changes.

This release is available via PyPi:

pip install scvi-tools

Conda availability will follow (< 4 days typically)

Please report any issues on GitHub.

scvi-tools 0.8.0-beta.0

12 Nov 23:45
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See the release notes for all the new functionality.

This release is available via PyPi:

pip install scvi-tools

Please report any issues on GitHub.

scvi-tools 0.7.1

20 Oct 18:51
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This small update provides access to our new Discourse forum from the docs website.

This release is available via PyPi:

pip install scvi-tools

Conda release will follow (additional 1-3 days)

Please report any issues on GitHub.

scvi-tools 0.7.0

14 Oct 17:36
2f07ef4
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scvi is now scvi-tools. This is a major upgrade and will break all previous code.

See the docs for all the new functionality.

This is the first official release of scvi-tools.

This release is available via PyPi:

pip install scvi-tools

Conda release will follow (additional 1-3 days)

Please report any issues on GitHub.

scvi-tools 0.7.0-beta.0

28 Sep 22:57
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Pre-release

scvi is now scvi-tools. This is a major upgrade and will break all previous code.

See the docs for all the new functionality.

This is the first beta release of scvi-tools.

This release is available via PyPi:

pip install scvi-tools

Conda release will take additional time.

Please report any issues on GitHub.

scvi-tools 0.7.0-alpha.6

25 Sep 23:47
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scvi is now scvi-tools. This is a major upgrade and will break all previous code.

See the docs for all the new functionality.

In this alpha release, we fixed various bugs in our DE functionality with sparse matrices, the memory configuration of anndata objects, automated the number of epochs for many models based on dataset size, fixed how we store categoricals so that anndatas set up with scvi-tools can be saved, fixed scvi.__version__, and other bug fixes.

This release is available via PyPi:

pip install scvi-tools

We are currently figuring out issues with our conda build.

Please report any issues on GitHub.

scvi-tools 0.7.0-alpha.5

22 Sep 20:53
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Pre-release

scvi is now scvi-tools. This is a major upgrade and will break all previous code.

See the docs for all the new functionality.

In this alpha release, we fixed various bugs in our DE functionality, restored proper defaults, reduced an extra pass on the train set per epoch when using early stopping, and fixed bugs with ScviConfig.

This release is available via PyPi:

pip install scvi-tools

We are currently figuring out issues with our conda build.

Please report any issues on GitHub.

scvi-tools 0.7.0-alpha.4

18 Sep 00:45
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scvi is now scvi-tools. This is a major upgrade and will break all previous code.

See the docs for all the new functionality.

In this release, we moved scvi.dataset to scvi.data and scvi.models to scvi.model.

This release is available via PyPi:

pip install scvi-tools

Please report any issues on GitHub.

scvi-tools 0.7.0-alpha.3

17 Sep 04:51
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Pre-release

scvi is now scvi-tools. This is a major upgrade and will break all previous code.

See the docs for all the new functionality.

This release is available via PyPi:

pip install scvi-tools

Please report any issues on GitHub.