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.nf-core.yml
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bump_version: null
lint:
files_exist:
- .github/ISSUE_TEMPLATE/bug_report.yml
- .github/ISSUE_TEMPLATE/feature_request.yml
- .github/PULL_REQUEST_TEMPLATE.md
- .github/CONTRIBUTING.md
- .github/.dockstore.yml
- conf/igenomes.config
- conf/igenomes_ignored.config
- conf/igenomes.config
- assets/email_template.html
- assets/sendmail_template.txt
- assets/email_template.txt
- .github/ISSUE_TEMPLATE/bug_report.yml
- .github/ISSUE_TEMPLATE/feature_request.yml
- .github/PULL_REQUEST_TEMPLATE.md
- .github/CONTRIBUTING.md
- .github/.dockstore.yml
- conf/igenomes.config
- conf/igenomes_ignored.config
- assets/email_template.html
- assets/sendmail_template.txt
- assets/email_template.txt
- CODE_OF_CONDUCT.md
- assets/nf-core-longreadmag_logo_light.png
- docs/images/nf-core-longreadmag_logo_light.png
- docs/images/nf-core-longreadmag_logo_dark.png
- .github/ISSUE_TEMPLATE/config.yml
- .github/workflows/awstest.yml
- .github/workflows/awsfulltest.yml
files_unchanged:
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- .github/ISSUE_TEMPLATE/config.yml
- .github/ISSUE_TEMPLATE/feature_request.yml
- .github/PULL_REQUEST_TEMPLATE.md
- .github/workflows/branch.yml
- .github/workflows/linting_comment.yml
- .github/workflows/linting.yml
- .github/CONTRIBUTING.md
- .github/.dockstore.yml
- .github/CONTRIBUTING.md
- .prettierignore
- .prettierignore
- .prettierignore
- .github/ISSUE_TEMPLATE/bug_report.yml
- .github/ISSUE_TEMPLATE/config.yml
- .github/ISSUE_TEMPLATE/feature_request.yml
- .github/PULL_REQUEST_TEMPLATE.md
- .github/workflows/branch.yml
- .github/workflows/linting_comment.yml
- .github/workflows/linting.yml
- .github/CONTRIBUTING.md
- .github/.dockstore.yml
- .github/CONTRIBUTING.md
- .prettierignore
- .prettierignore
- .prettierignore
- CODE_OF_CONDUCT.md
- assets/nf-core-longreadmag_logo_light.png
- docs/images/nf-core-longreadmag_logo_light.png
- docs/images/nf-core-longreadmag_logo_dark.png
- .github/ISSUE_TEMPLATE/bug_report.yml
included_configs: false
multiqc_config:
- report_comment
nextflow_config:
- process.cpus
- process.memory
- process.time
- custom_config
- params.custom_config_version
- params.custom_config_base
- manifest.name
- manifest.homePage
- validation.help.beforeText
- validation.help.afterText
- validation.summary.beforeText
- validation.summary.afterText
readme:
- nextflow_badge
- nextflow_badge
- nextflow_badge
nf_core_version: 3.0.2
org_path: null
repository_type: pipeline
template:
author: Jim Downie, Will Eagles, Noah Gettle
description: Construct MAGs from long reads.
force: false
is_nfcore: false
name: longreadmag
org: sanger-tol
outdir: .
skip_features:
- igenomes
- github_badges
- codespaces
- fastqc
- email
- adaptivecard
- slackreport
- seqera_platform
version: 1.0.0dev
update: null