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Agree on which Busco lineage to use for which species #100

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muffato opened this issue Dec 8, 2023 · 0 comments
Open

Agree on which Busco lineage to use for which species #100

muffato opened this issue Dec 8, 2023 · 0 comments
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@muffato
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muffato commented Dec 8, 2023

Description of feature

We use Busco to assess the completeness & fragmentation of an assembly. The main parameter is a lineage name, that needs to be phylogenetically relevant to the species being tested. Our implementations are inconsistent:

We need to agree on one rule and use it throughout all pipelines.

@muffato muffato added the enhancement Improvement of the existing features label Dec 8, 2023
muffato added a commit that referenced this issue Feb 25, 2024
We will fix that properly in #100
muffato added a commit that referenced this issue Feb 26, 2024
We will fix that properly in #100
@muffato muffato removed the enhancement Improvement of the existing features label Jun 1, 2024
@muffato muffato added the question Further information is requested label Jun 17, 2024
@muffato muffato moved this from Todo to Triage in Genome After Party Jun 17, 2024
@muffato muffato moved this from Triage to Todo in Genome After Party Jun 17, 2024
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