diff --git a/ngs_FASTQC.sh b/ngs_FASTQC.sh index 2338e04..83c2e85 100755 --- a/ngs_FASTQC.sh +++ b/ngs_FASTQC.sh @@ -123,6 +123,7 @@ ngsCmd_FASTQC() { # THE FOLLOWING CLEANUP IS ONLY RELEVANT TO FASTQC VERSION 0.11.1 AND LATER prnCmd "mv $SAMPLE/$ngsLocal_FASTQC_OUT_DIR/unaligned_2.fq_fastqc.html $SAMPLE/$ngsLocal_FASTQC_OUT_DIR/$SAMPLE.read_2.$ngsLocal_FASTQC_OUT_DIR.html" mv $SAMPLE/$ngsLocal_FASTQC_OUT_DIR/unaligned_2.fq_fastqc.html $SAMPLE/$ngsLocal_FASTQC_OUT_DIR/$SAMPLE.read_2.$ngsLocal_FASTQC_OUT_DIR.html + fi fi prnCmd "# FINISHED: FASTQC"