Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

ModuleNotFoundError: No module named 'cytoself.datamanager' #26

Open
dedy1179 opened this issue Jul 11, 2023 · 1 comment
Open

ModuleNotFoundError: No module named 'cytoself.datamanager' #26

dedy1179 opened this issue Jul 11, 2023 · 1 comment

Comments

@dedy1179
Copy link

Dear Author of cytoself,

I got an Error when I run preparing Data on cytoself such as Attach file I send with this email. Could you please give suggestions for problem solving.
Thank you for your attention.

Best regards,
Dedy
Cytoself
@li-li-github
Copy link
Collaborator

Hi, it looks like your python interpreter couldn't find cytoself module. Please check if the working path and other environment settings in your IDE are correct. You can also try to run your notebook using normal Jupyter notebook with the correct working path.

@sheryllin111 sheryllin111 mentioned this issue Sep 28, 2023
Closed
jessica-ewald pushed a commit to jessica-ewald/cytoself_varchamp that referenced this issue Jan 17, 2025
@li-li-github
Fix cross reference in the tests (royerlab#26)
b2fe20e 
* Initial commit with errors

* fixed the circular import issues

* added conftest.py;

* refactored fixtures

* refactored test_vanilla_trainer.py

* refactored the rest of trainers

* fixed depencecy install in github actions

* added data dimension check in analysis/base.py;
refactored analysis

* fixed path in pytest-codecov-conda.yml

* converted relative path to absolute path

* replaced unittest by pytest in test_basetrainer.py

* improved test coverage a bit

* renamed a parameter

* some name refactoring
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
2 participants
@li-li-github @dedy1179