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<!DOCTYPE html>
<html lang="en">
<head>
<meta charset="UTF-8">
<meta http-equiv="X-UA-Compatible" content="IE=edge">
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>Roman Makarov CV</title>
<link rel="stylesheet" href="css/main.css">
</head>
<body>
<div class="main">
<div class="navbar">
<span title="dark mode" class="toggle-switch">
<span class="toggle-knob"></span>
</span>
</div>
<div class="name-surname">
<div class="name" id="name">Roman</div>
<div class="surname">Makarov</div>
</div>
<div class="contacts">[email protected]</div>
<div class="contacts">Heraklion, Greece</div>
<div class="links">
<a href="https://github.com/r-makarov">github</a>
<a href="https://scholar.google.ru/citations?user=lKXJREUAAAAJ&hl=en">scholar</a>
</div>
<hr>
<div class="section">
<h1>Education</h1>
<div class="item">
<div class="date">2021-present</div>
<div class="position-title">PhD in Biology</div>
<div class="institution">SmartNets ITN<br><a href="https://www.smartnets-etn.eu">smartnets-etn.eu</a></div>
<div class="institution">University of Crete, </div>
<div class="location">Heraklion, Greece</div>
</div>
<div class="item">
<div class="date">2016-2018</div>
<div class="position-title">MSc in Biology</div>
<div class="comment">Specialization in neurobiology, Honors</div>
<div class="institution">Kazan Federal University</div>
<div class="location">Kazan, Russia</div>
</div>
<div class="item">
<div class="date">2010-2015</div>
<div class="position-title">Specialist Degree in Civil Engineering</div>
<div class="institution">Ufa State Petroleum Technological University</div>
<div class="location">Ufa, Russia</div>
</div>
</div>
<hr>
<div class="section">
<h1>Research Experience</h1>
<div class="item">
<div class="date">2021-present</div>
<div class="position-title">Researcher</div>
<div class="institution">Poirazi Lab <br><a href="https://www.dendrites.gr">dendrites.gr</a></div>
<div class="institution">Institute of Molecular Biology and Biotechnology</div>
<div class="institution">Foundation for Research and Technology-Hellas</div>
<div class="location">Heraklion, Greece</div>
</div>
<div class="item">
<div class="date">2018-2021</div>
<div class="position-title">Junior Researcher</div>
<div class="institution">IAL Developmental Neurobiology <br><a
href="https://www.ial-developmental-neurobiology.com/en/">ial-developmental-neurobiology.com</a>
</div>
<div class="institution">Institute of Fundamental Medicine and Biology</div>
<div class="institution">Kazan Federal University </div>
<div class="location">Kazan, Russia</div>
</div>
<div class="item">
<div class="date">2016-2018</div>
<div class="position-title">Research Assistant</div>
<div class="institution">IAL Developmental Neurobiology</div>
<div class="institution">Institute of Fundamental Medicine and Biology</div>
<div class="institution">Kazan Federal University</div>
<div class="location">Kazan, Russia</div>
</div>
</div>
<hr>
<div class="section">
<h1>Research Skills</h1>
<ul class="skills-tree">
<li>Computational skills
<ul>
<li>Programming Languages <span>(Python, MATLAB)</span> </li>
<li>Modeling and simulation <span>(NEURON, BRIAN2)</span> </li>
<li> Machine learning <span>(sklearn, XGBoost, Pytorch, Keras)</span></li>
<li>Data analysis <span>(neo, MNE, Klusta, SpyKING CIRCUS)</span></li>
</ul>
</li>
<li> Experimental skills
<ul>
<li>Surgery in rodents</li>
<li><i>In-vivo</i> electrophysiology</li>
<li>Histology</li>
</ul>
</li>
<li>Research management skills
<ul>
<li>Linux system administration</li>
<li>Version control</li>
<li>Knowledge management <span>(ontologies)</span></li>
</ul>
</li>
<li>Communication skills
<ul>
<li>Scientific writing and publishing</li>
<li>Scientific visualization</li>
<li>Web development </li>
<li>Languages
<ul>
<li>English <span>(advanced, TOEFL iBT 100/120)</span></li>
<li>Russian <span>(native)</span></li>
<li>Greek <span>(elementary)</span></li>
</ul>
</li>
</ul>
</li>
</ul>
</div>
<hr>
<div class="section">
<h1>Publications</h1>
<div class="publication-type">Peer-reviewed journals</div>
<ol>
<li>
<div class="item">
<div class="date">2024</div>
<div class="authors">
Michalis Pagkalos, <b>Roman Makarov</b>, Panayiota Poirazi
</div>
<div class="title">
Leveraging dendritic properties to advance machine learning and neuro-inspired computing
</div>
<div class="journal">Current Opinion in Neurobiology <b>85</b>, 102853</div>
<a
href="https://doi.org/10.1016/j.conb.2024.102853">https://doi.org/10.1016/j.conb.2024.102853</a>
</div>
</li>
<li>
<div class="item">
<div class="date">2023</div>
<div class="authors">
<b>Roman Makarov</b>, Michalis Pagkalos, Panayiota Poirazi
</div>
<div class="title">
Dendrites and efficiency: Optimizing performance and resource utilization
</div>
<div class="journal">Current Opinion in Neurobiology <b>83</b>, 102812</div>
<a
href="https://doi.org/10.1016/j.conb.2023.102812">https://doi.org/10.1016/j.conb.2023.102812</a>
</div>
</li>
<li>
<div class="item">
<div class="date">2021</div>
<div class="authors">
<b>Roman Makarov</b>, Mikhail Sintsov, Guzel Valeeva, Pavel Starikov, Dmitry Negrov, Roustem
Khazipov
</div>
<div class="title">
Bone conducted responses in the neonatal rat auditory cortex
</div>
<div class="journal">Scientific Reports <b>11</b>, 16777</div>
<a
href="https://doi.org/10.1038/s41598-021-96188-9">https://doi.org/10.1038/s41598-021-96188-9</a>
</div>
</li>
<li>
<div class="item">
<div class="date">2019</div>
<div class="authors">Guzel Valeeva, Sona Janackova, Azat Nasretdinov, Veronika Rychkova,
<b>Roman
Makarov</b>,
Gregory L Holmes, Roustem Khazipov, Pierre-Pascal Lenck-Santini
</div>
<div class="title">Emergence of Coordinated Activity in the Developing Entorhinal–Hippocampal
Network
</div>
<div class="journal">Cerebral Cortex <b>29</b>, Issue 2</div>
<a href="https://doi.org/10.1093/cercor/bhy309">https://doi.org/10.1093/cercor/bhy309</a>
</div>
</li>
</ol>
<div class="publication-type">Conference proceedings</div>
<ol>
<li>
<div class="item">
<div class="date">2024</div>
<div class="authors">
<b>Roman Makarov</b>, Spyridon Chavlis, Panayiota Poirazi
</div>
<div class="title">DendroTweaks: An interactive approach for unraveling dendritic dynamics
</div>
<div class="journal">
Science Communications World Wide
</div>
<a href="https://doi.org/10.57736/abba-7149">https://doi.org/10.57736/abba-7149</a>
</div>
</li>
<li>
<div class="item">
<div class="date">2021</div>
<div class="authors">
Azat Nasretdinov, <b>Roman Makarov</b>, Alina Vazetdinova, Fliza Valiullina-Rakhmatullina,
Alexandr Evstifeev, Roustem Khazipov
</div>
<div class="title">Sequence to sequence reconstruction of whole-cell signals from the
cell-attached current-clamp recordings
</div>
<div class="journal">
European Journal of Clinical Investigation, <b>51</b>, pp. 99-99
</div>
<a href=" https://doi.org/10.1111/eci.13567">https://doi.org/10.1111/eci.13567</a>
</div>
</li>
<li>
<div class="item">
<div class="date">2019</div>
<div class="authors">Gulshat Burkhanova, <b>Roman Makarov</b>, Mikhail Sintsov, Guzel Valeeva,
Roustem
Khazipov
</div>
<div class="title">Unsupervised learning of activity patterns in the neonatal rat auditory
cortex
</div>
<div class="journal">European Journal of Clinical Investigation. Special Issue: Abstracts of the
53rd
Annual Scientific Meeting of the European Society for Clinical Investigation, Coimbra,
Portugal
<b>29</b>, Issue 2
</div>
<a href="https://doi.org/10.1111/eci.13109">https://doi.org/10.1111/eci.13109</a>
</div>
</li>
</ol>
</div>
<hr>
<div class="section">
<h1>Conferences</h1>
<ol>
<li>
<div class="item">
<div class="date">2024</div>
<div class="event">FENS Forum <span>(poster)</span></div>
<div class="location"> Vienna, Austria</div>
</div>
</li>
<li>
<div class="item">
<div class="date">2024</div>
<div class="event">EMBO Workshop "Principles of dendritic function and computation"<span>(poster)</span></div>
<div class="location"> Chania, Greece</div>
</div>
</li>
<li>
<div class="item">
<div class="date">2023</div>
<div class="event">30th Meeting of the Hellenic Society for Neuroscience, HSfN <span>(poster)</span></div>
<div class="location"> Athens, Greece</div>
</div>
</li>
<li>
<div class="item">
<div class="date">2023</div>
<div class="event">Free and Open Source Software Communities Meeting, FOSSCOMM <span>(booth)</span></div>
<div class="location"> Heraklion, Greece</div>
</div>
<li>
<div class="item">
<div class="date">2021</div>
<div class="event">Neuromatch 3.0 <span>(traditional talk)</span></div>
<div class="location"> Virtual conference</div>
</div>
</li>
<li>
<div class="item">
<div class="date">2019</div>
<div class="event">Bernstein Conference <span>(poster)</span></div>
<div class="location">Berlin, Germany</div>
</div>
</li>
<li>
<div class="item">
<div class="date">2019</div>
<div class="event">53rd Annual Scientific Meeting of the European Society for Clinical
Investigation <span>(poster)</span>
</div>
<div class="location">Coimbra, Portugal</div>
</div>
</li>
<li>
<div class="item">
<div class="date">2018</div>
<div class="event">The International Conference “CCCP 2018 - Cortical Codes: Control &
Perception”<span>(poster)</span>
</div>
<div class="location">Moscow, Russia</div>
</div>
</li>
<li>
<div class="item">
<div class="date">2018</div>
<div class="event">The 4th International Conference “Brain-Computer Interface: Science and
Practice”
<span>(poster)</span>
</div>
<div class="location">Samara, Russia</div>
</div>
</li>
<li>
<div class="item">
<div class="date">2018</div>
<div class="event">The 14th International Conference “Adaptation of Developing Organism”
<span>(poster)</span>
</div>
<div class="location">Kazan, Russia</div>
</div>
</li>
<li>
<div class="item">
<div class="date">2017</div>
<div class="event">The 10th Conference of Young Biology Scientists “SymBioSE Russia”
<span>(poster)</span>
</div>
<div class="location">Kazan, Russia</div>
</div>
</li>
</ol>
</div>
<hr>
<div class="section">
<h1>Awards</h1>
<ul>
<li>
<div class="item">
<div class="date">2023</div>
<div class="event">Travel grant for the 30th Meeting of the Hellenic Society for Neuroscience</div>
</div>
</li>
<li>
<div class="item">
<div class="date">2021-2024</div>
<div class="event">PhD scholarship, Marie Skłodowska-Curie Actions, Horizon 2020 programme of
the European Union </div>
</div>
</li>
<div class="end">August, 2024</div>
</ul>
</div>
</div>
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