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Consider storing objects to minimise re-running detection step when changing parameters #290

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quantumjot opened this issue Mar 22, 2023 · 0 comments
Open

Consider storing objects to minimise re-running detection step when changing parameters #290

quantumjot opened this issue Mar 22, 2023 · 0 comments
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medium priority napari-plugin

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@quantumjot
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The current _run_tracker function always calls segmentation_to_objects even if we are only changing some config parameters:

https://github.com/lowe-lab-ucl/napari-btrack/blob/c294d1ca5c0c894599e464f9183464a2bcd8e4ff/napari_btrack/main.py#L144-L156

we could consider storing these detections, unless the chosen segmentation layer changes, in which case we can rerun the detection step.
@paddyroddy paddyroddy transferred this issue from lowe-lab-ucl/napari-btrack Mar 22, 2023
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@quantumjot @paddyroddy