render_tools.yml

name: Render Galaxy Tools

on:
  workflow_dispatch: {}
  push:
    branches: [main]
    paths-ignore:
      - 'tool_collections/**'
      - 'tools/**'
      - 'README.md'
  pull_request:
    branches: [main]
    paths-ignore:
      - 'tool_collections/**'
      - 'tools/**'
      - 'README.md'

jobs:
  render:
    runs-on: ubuntu-latest
    steps:
      - name: checkout source
        uses: actions/checkout@v4

      - uses: conda-incubator/setup-miniconda@v3
        with:
          auto-activate-base: true
          activate-environment: ""

      - name: render tools
        shell: bash -l {0}
        run: |
          conda install pyyaml
          make render

      - name: create tools PR
        uses: peter-evans/create-pull-request@v7
        if: ${{ github.ref == 'refs/heads/main' }}
        with:
          add-paths: tools
          branch: create-pull-request/patch-tools
          token: ${{ secrets.Q2D2_TOKEN }}
          commit-message: Update Galaxy Tools
          committer: q2d2 <q2d2.noreply@gmail.com>
          author: q2d2 <q2d2.noreply@gmail.com>
          title: Automated re-render of Galaxy Tools
          body: Results of `make render` on `main`

      - name: create collections PR
        uses: peter-evans/create-pull-request@v7
        if: ${{ github.ref == 'refs/heads/main' }}
        with:
          add-paths: tool_collections
          branch: create-pull-request/patch-collections
          token: ${{ secrets.Q2D2_TOKEN }}
          commit-message: Update Galaxy Tool Collections
          committer: q2d2 <q2d2.noreply@gmail.com>
          author: q2d2 <q2d2.noreply@gmail.com>
          title: Automated re-render of Galaxy Tool Collections (wait to merge)
          body: |
            Results of `make render` on `main`.
            DO NOT MERGE until all tools in the sibling PR have successfully deployed.