Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Validation checks for nodes and edges #10

Open
cthoyt opened this issue Feb 6, 2017 · 0 comments
Open

Validation checks for nodes and edges #10

cthoyt opened this issue Feb 6, 2017 · 0 comments

Comments

@cthoyt
Copy link
Member

cthoyt commented Feb 6, 2017

Validate if:

  1. enzyme activity is described by the IUBMB EC classification system (http://www.chem.qmul.ac.uk/iubmb/)
  2. a dbSNP RS identifier is correctly linked to a gene
  3. substrates and products in a (bio-)chemical reaction are correct
    Please write comments if you have more suggestions

This issue has been migrated from pybel/pybel#65

From Reagon:

Find the statements that don't have a disease state (normal, AD, etc) to get flagged.

This could either be done on compile time, or the line number for each statement could be included in the graph.

This has been migrated from pybel/pybel#17.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Projects
None yet
Development

No branches or pull requests

1 participant