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.pre-commit-config.yaml
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repos:
- repo: https://github.com/pre-commit/pre-commit-hooks
rev: v4.5.0
hooks:
- id: check-yaml
- id: end-of-file-fixer
- id: trailing-whitespace
- repo: https://github.com/pycqa/isort
rev: 5.12.0
hooks:
- id: isort
name: isort (python)
- repo: https://github.com/psf/black
rev: 23.9.1
hooks:
- id: black
- repo: https://github.com/pycqa/flake8
rev: 6.1.0
hooks:
- id: flake8
exclude: '^timemachine/cpp'
- repo: https://github.com/pre-commit/mirrors-mypy
rev: v1.5.1
hooks:
- id: mypy
# include dependencies that export types (i.e. have a py.typed file in the root module) so that they can be used
# by mypy in pre-commit
additional_dependencies:
- "jax==0.4.28"
- "numpy==1.24.1"
- "scipy==1.10.1"
- "matplotlib==3.7.1"
# Exclude custom_ops.py to work around clash with stub file when typechecking
exclude: '^timemachine/lib/custom_ops.py$'
- repo: https://github.com/pre-commit/mirrors-clang-format
rev: v16.0.6
hooks:
- id: clang-format
types_or: [c, c++, cuda]
files: '^timemachine/cpp/src/'
- repo: local
hooks:
- id: verify-typing-stubs
name: Verify typing stubs
# NOTE: Building generates new typing stubs, so this hook will
# fail if stub file committed to the repo is out of date.
# (pre-commit hooks fail if files are modified)
entry: make build
language: system
pass_filenames: false
files: '^timemachine/cpp/src/wrap_kernels.cpp$'
exclude: >
(?x)
\.pdb$
| \.sdf$
| \.proto$
| \.xml$
| /vendored/
| ^attic/
| ^timemachine/ff/params/
| ^timemachine/_vendored/
| ^versioneer\.py$
| ^timemachine/_version\.py$
| ^timemachine/lib/custom_ops.pyi$