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MAPlotEditor.m
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MAPlotEditor.m
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function varargout = MAPlotEditor(varargin)
% MAPLOTEDITOR M-file for MAPlotEditor.fig
% MAPLOTEDITOR, by itself, creates a new MAPLOTEDITOR or raises the existing
% singleton*.
%
% H = MAPLOTEDITOR returns the handle to a new MAPLOTEDITOR or the handle to
% the existing singleton*.
%
% MAPLOTEDITOR('CALLBACK',hObject,eventData,handles,...) calls the local
% function named CALLBACK in MAPLOTEDITOR.M with the given input arguments.
%
% MAPLOTEDITOR('Property','Value',...) creates a new MAPLOTEDITOR or raises the
% existing singleton*. Starting from the left, property value pairs are
% applied to the GUI before MAPlotEditor_OpeningFunction gets called. An
% unrecognized property name or invalid value makes property application
% stop. All inputs are passed to MAPlotEditor_OpeningFcn via varargin.
%
% *See GUI Options on GUIDE's Tools menu. Choose "GUI allows only one
% instance to run (singleton)".
%
% See also: GUIDE, GUIDATA, GUIHANDLES
% Edit the above text to modify the response to help MAPlotEditor
% Last Modified by GUIDE v2.5 28-Jun-2007 16:22:58
% Begin initialization code - DO NOT EDIT
gui_Singleton = 1;
gui_State = struct('gui_Name', mfilename, ...
'gui_Singleton', gui_Singleton, ...
'gui_OpeningFcn', @MAPlotEditor_OpeningFcn, ...
'gui_OutputFcn', @MAPlotEditor_OutputFcn, ...
'gui_LayoutFcn', [] , ...
'gui_Callback', []);
if nargin && ischar(varargin{1})
gui_State.gui_Callback = str2func(varargin{1});
end
if nargout
[varargout{1:nargout}] = gui_mainfcn(gui_State, varargin{:});
else
gui_mainfcn(gui_State, varargin{:});
end
% End initialization code - DO NOT EDIT
% --- Executes just before MAPlotEditor is made visible.
function MAPlotEditor_OpeningFcn(hObject, eventdata, handles, varargin)
% Set Window size and Position
screensize=get(0,'screensize');
winsize=get(handles.MAPlotEditor,'Position');
winwidth=winsize(3);
winheight=winsize(4);
screenwidth=screensize(3);
screenheight=screensize(4);
winpos=[0.5*(screenwidth-winwidth),0.5*(screenheight-winheight),winwidth,winheight];
set(handles.MAPlotEditor,'Position',winpos);
% Get input arguments
handles.arrays=varargin{1}; % Arrays for the listbox
handles.subPfmd=varargin{2}; % Has subgrid normalization been performed?
set(handles.beforeAfterNormCheck,'Value',1)
set(handles.arrayList,'String',handles.arrays,...
'Max',length(handles.arrays),...
'Value',1)
if ~handles.subPfmd
set(handles.displaySubCheck,'Enable','off')
end
handles.len=length(get(handles.arrayList,'Value'));
% Choose default outputs (1st aproach, will also depend from the input)
handles.whichones=handles.arrays(1); % No arrays returned by default
handles.before=get(handles.beforeNormCheck,'Value'); % Do not display
handles.after=get(handles.afterNormCheck,'Value'); % Do not display
handles.beforeafter=get(handles.beforeAfterNormCheck,'Value'); % Do not display
handles.beforeTitles=''; % Auto titles
handles.afterTitles=''; % Auto titles
handles.beforeafterTitles=''; % Auto titles
handles.disCurve=false; % Do not display
handles.disFCLine=false; % Do not display
handles.FCLine=2; % Default FC
handles.disSub=false; % Do not display subgrid plots
handles.cancel=false; % Cancel not pressed
% Update handles structure
guidata(hObject, handles);
% UIWAIT makes MAPlotEditor wait for user response (see UIRESUME)
uiwait(handles.MAPlotEditor);
% --- Outputs from this function are returned to the command line.
function varargout = MAPlotEditor_OutputFcn(hObject, eventdata, handles)
if (get(handles.cancelButton,'Value')==0)
delete(handles.MAPlotEditor);
elseif (get(handles.okButton,'Value')==0)
delete(handles.MAPlotEditor);
end
varargout{1}=handles.whichones;
varargout{2}=handles.before;
varargout{3}=handles.after;
varargout{4}=handles.beforeafter;
varargout{5}=handles.beforeTitles;
varargout{6}=handles.afterTitles;
varargout{7}=handles.beforeafterTitles;
varargout{8}=handles.disCurve;
varargout{9}=handles.disFCLine;
varargout{10}=handles.FCLine;
varargout{11}=handles.disSub;
varargout{12}=handles.cancel;
% --- Executes on selection change in arrayList.
function arrayList_Callback(hObject, eventdata, handles)
contents=get(hObject,'String');
val=get(hObject,'Value');
handles.whichones=contents(val);
handles.len=length(val);
set(handles.beforeNormTitlesEdit,'Max',handles.len)
set(handles.afterNormTitlesEdit,'Max',handles.len)
set(handles.befAftNormTitlesEdit,'Max',handles.len)
guidata(hObject,handles);
% --- Executes during object creation, after setting all properties.
function arrayList_CreateFcn(hObject, eventdata, handles)
if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor'))
set(hObject,'BackgroundColor','white');
end
% --- Executes on button press in beforeNormCheck.
function beforeNormCheck_Callback(hObject, eventdata, handles)
if get(hObject,'Value')==1
handles.before=true;
set(handles.beforeNormTitlesEdit,'Enable','on')
else
handles.before=false;
set(handles.beforeNormTitlesEdit,'Enable','off')
end
guidata(hObject,handles);
% --- Executes on button press in afterNormCheck.
function afterNormCheck_Callback(hObject, eventdata, handles)
if get(hObject,'Value')==1
handles.after=true;
set(handles.afterNormTitlesEdit,'Enable','on')
else
handles.after=false;
set(handles.afterNormTitlesEdit,'Enable','off')
end
guidata(hObject,handles);
% --- Executes on button press in beforeAfterNormCheck.
function beforeAfterNormCheck_Callback(hObject, eventdata, handles)
if get(hObject,'Value')==1
handles.beforeafter=true;
set(handles.befAftNormTitlesEdit,'Enable','on')
else
handles.beforeafter=false;
set(handles.befAftNormTitlesEdit,'Enable','off')
end
guidata(hObject,handles);
function beforeNormTitlesEdit_Callback(hObject, eventdata, handles)
tit=cellstr(get(hObject,'String'));
if length(tit)~=handles.len
uiwait(errordlg({'Please provide a number of titles equal to the number of arrays',...
['you selected (',num2str(handles.len),') or else leave the field completely'],...
'empty for automated title generation.'},'Bad Input'));
set(hObject,'String','')
handles.beforeTitles='';
else
handles.beforeTitles=tit;
end
guidata(hObject,handles);
% --- Executes during object creation, after setting all properties.
function beforeNormTitlesEdit_CreateFcn(hObject, eventdata, handles)
if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor'))
set(hObject,'BackgroundColor','white');
end
function afterNormTitlesEdit_Callback(hObject, eventdata, handles)
tit=cellstr(get(hObject,'String'));
if length(tit)~=handles.len
uiwait(errordlg({'Please provide a number of titles equal to the number of arrays',...
['you selected (',num2str(handles.len),') or else leave the field completely'],...
'empty for automated title generation.'},'Bad Input'));
set(hObject,'String','')
handles.afterTitles='';
else
handles.afterTitles=tit;
end
guidata(hObject,handles);
% --- Executes during object creation, after setting all properties.
function afterNormTitlesEdit_CreateFcn(hObject, eventdata, handles)
if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor'))
set(hObject,'BackgroundColor','white');
end
function befAftNormTitlesEdit_Callback(hObject, eventdata, handles)
tit=cellstr(get(hObject,'String'));
if length(tit)~=handles.len
uiwait(errordlg({'Please provide a number of titles equal to the number of arrays',...
['you selected (',num2str(handles.len),') or else leave the field completely'],...
'empty for automated title generation.'},'Bad Input'));
set(hObject,'String','')
handles.beforeafterTitles='';
else
handles.beforeafterTitles=tit;
end
guidata(hObject,handles);
% --- Executes during object creation, after setting all properties.
function befAftNormTitlesEdit_CreateFcn(hObject, eventdata, handles)
if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor'))
set(hObject,'BackgroundColor','white');
end
% --- Executes on button press in displaySubCheck.
function displaySubCheck_Callback(hObject, eventdata, handles)
if get(hObject,'Value')==1
handles.disSub=true;
set(handles.beforeAfterNormCheck,'Enable','off')
set(handles.befAftNormTitlesEdit,'Enable','off')
handles.beforeafter=false;
else
handles.disSub=false;
set(handles.beforeAfterNormCheck,'Enable','on')
set(handles.befAftNormTitlesEdit,'Enable','on')
handles.beforeafter=true;
end
guidata(hObject,handles);
% --- Executes on button press in displayCurveCheck.
function displayCurveCheck_Callback(hObject, eventdata, handles)
if get(hObject,'Value')==1
handles.disCurve=true;
else
handles.disCurve=false;
end
guidata(hObject,handles);
% --- Executes on button press in displayFoldCheck.
function displayFoldCheck_Callback(hObject, eventdata, handles)
if get(hObject,'Value')==1
handles.disFCLine=true;
set(handles.fcStatic,'Enable','on')
set(handles.fcEdit,'Enable','on')
else
handles.disFCLine=false;
set(handles.fcStatic,'Enable','off')
set(handles.fcEdit,'Enable','off')
end
guidata(hObject,handles);
function fcEdit_Callback(hObject, eventdata, handles)
fc=str2double(get(hObject,'String'));
if isnan(fc) || fc<=0
uiwait(errordlg('The fold change line must be a positive value.',...
'Bad Input'));
set(hObject,'String','2');
handles.FCLine=str2double(get(hObject,'String'));
else
handles.FCLine=fc;
end
guidata(hObject,handles);
% --- Executes during object creation, after setting all properties.
function fcEdit_CreateFcn(hObject, eventdata, handles)
if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor'))
set(hObject,'BackgroundColor','white');
end
% --- Executes on button press in okButton.
function okButton_Callback(hObject, eventdata, handles)
uiresume(handles.MAPlotEditor);
% --- Executes on button press in cancelButton.
function cancelButton_Callback(hObject, eventdata, handles)
% Return defaults
handles.whichones='';
handles.before=get(handles.beforeNormCheck,'Value');
handles.after=get(handles.afterNormCheck,'Value');
handles.beforeafter=get(handles.beforeAfterNormCheck,'Value');
handles.beforeTitles='';
handles.afterTitles='';
handles.beforeafterTitles='';
handles.disCurve=false;
handles.disFCLine=false;
handles.FCLine=2;
handles.disSub=false;
handles.cancel=false; % Cancel pressed
guidata(hObject,handles);
uiresume(handles.MAPlotEditor);