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Do we need to interact with these at all? I dont see why they exist. Main thing to do is figure out if they add any functionality that is actually completely out of spec rather than renaming stuff in the in-memory object for some reason. There is a ton of special casing to handle coercion and whatnot in pynwb that we may or may not need to implement as well, but thats a separate question from "do we need to do anything about the maps"
The text was updated successfully, but these errors were encountered:
There is this mysterious attribute electrodes that is in the pynwb NWBFile class mentioned in the various getter/setter methods: https://github.com/NeurodataWithoutBorders/pynwb/blob/379213673cdb4064d5565326622d0dc1ca31d50c/src/pynwb/file.py#L725
But the schema has no such attribute: https://github.com/NeurodataWithoutBorders/nwb-schema/blob/dev/core/nwb.file.yaml
There's NWBFile.extracellular_ephys.electrodes but not just a plain electrodes
Its an ElectrodeTable which also does not exist in the schema: https://github.com/search?q=repo%3ANeurodataWithoutBorders%2Fnwb-schema+ElectrodeTable&type=code
It turns out there is an out of spec mapping between the electrodes attribute and the ecephys.electrodes attribute: https://github.com/NeurodataWithoutBorders/pynwb/blob/379213673cdb4064d5565326622d0dc1ca31d50c/src/pynwb/io/file.py#L74-L77
Thats implemented here:
https://github.com/hdmf-dev/hdmf/blob/a98e5e98cbfb6e824fb57eb5e7eac1dc6cd4532b/src/hdmf/build/objectmapper.py#L92
Do we need to interact with these at all? I dont see why they exist. Main thing to do is figure out if they add any functionality that is actually completely out of spec rather than renaming stuff in the in-memory object for some reason. There is a ton of special casing to handle coercion and whatnot in pynwb that we may or may not need to implement as well, but thats a separate question from "do we need to do anything about the maps"
The text was updated successfully, but these errors were encountered: