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Useful Links
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Below is a hand-picked and categorised list of resources that we used when learning to code and still refer back to frequently.

Introduction to R

Introduction to R, vectors, data frames and matrices http://tryr.codeschool.com
A collection of R code ranging from basics, data visualisation and stats http://sthda.com
A comprehensive online guide to using R http://www.cookbook-r.com/
A metablog of R tutorials http://www.r-bloggers.com
Videos from an online course on R (intro to R, data formatting, data visualisation) http://blog.revolutionanalytics.com/2012/12/coursera-videos.html
How to cite R and R packages in your assignment http://www.blopig.com/blog/2013/07/citing-r-packages-in-your-thesispaperassignments/

Graphics and Data Visualisation

Base Graphics in R: A Detailed Idiot’s Guide susanejohnston.wordpress.com/2013/08/30/base-graphics-in-r-a-detailed-idiots-guide/
Sample chapters from Hadley Wickham’s ggplot2 book ggplot2-book.org/
R colour values http://www.stat.columbia.edu/~tzheng/files/Rcolor.pdf
Graphics guide, mostly ggplot2. ase.tufts.edu/bugs/guide/assets/R%20Graphics%20Cookbook.pdf
Shiny tutorials shiny.rstudio.com

R Markdown, Version Control & Reproducible Research

An Introduction to Reproducible Research in R and RStudio susanejohnston.wordpress.com/2015/05/12/an-introduction-to-reproducible-research-in-r-and-r-studio/
Download LaTeX, find useful tutorials and guides www.latex-project.org
Github tutorial repository help.github.com/articles/good-resources-for-learning-git-and-github/
Markdown cheatsheet github.com/adam-p/markdown-here/wiki/Markdown-Here-Cheatsheet
R notebooks introduction video www.rstudio.com/resources/webinars/introducing-notebooks-with-r-markdown/
Concise guide to LaTeX programming https://tobi.oetiker.ch/lshort/lshort.pdf
British Ecological Society Guide to Data Management in Ecology and Evolution britishecologicalsociety.org/wp-content/uploads/Publ_Data-Management-Booklet.pdf
Materials for the version control and reproducible code workshops at the British Ecological Society 2016 Annual Meeting github.com/BES2016Workshop

Statistical Analysis

Standard textbook for biological statistics using R rcompanion.org/documents/RCompanionBioStatistics.pdf
Hadley Wickham's R for Data Science book r4ds.had.co.nz/

Data Manipulation

Seeing Theory: a stunning visual guide to statistics students.brown.edu/seeing-theory/index.html
The dplyr package and pipes seananderson.ca/2014/09/13/dplyr-intro.html
Data wrangling cheatsheet, dplyr and tidyr www.rstudio.com/wp-content/uploads/2015/02/data-wrangling-cheatsheet.pdf
Cheatsheets for ggplot, dplyr, Shiny, etc. www.rstudio.com/resources/cheatsheets/

Shiny

The official Shiny tutorial from RStudio http://shiny.rstudio.com/tutorial/

Fun Stuff

Submissions of arty data visualisation and goofs twitter.com/accidental__art
Funny illustration of how we all feel when coding lisacharlotterost.github.io/2016/09/29/learn-how-to-code/
A guide for aspiring video game programmers - recommended by one of our young users! ithare.com/programming-guide-for-video-gamers/
Learning to Code and Design Video Games - another really great recommendation! swagbucks.com/shop/student-stem-guide

Troubleshooting

Ask Questions. stackoverflow.com

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