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SSCHA tutorial 2023: Tutorial 2: ADVANCED FREE ENERGY MINIMIZATION #372

Answered by mesonepigreco
anyi-mxh asked this question in Q&A
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Hi,
The difference in results is likely due to the limited number of configurations being used—only 10 in this case (the same as we are using). This small sample size introduces significant stochastic error. While the seed should help ensure consistency, differences can still arise if you're using a different Python version or a different version of the NumPy library.

For a proper calculation, we would typically need between 500 and 1000 configurations to achieve a converged result.

Regarding the temperature, you are absolutely correct—the two temperatures must match. That discrepancy is indeed a mistake.

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@anyi-mxh
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