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justfile
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# just has no idiom for setting a default value for an environment variable
# so we shell out, as we need VIRTUAL_ENV in the justfile environment
export VIRTUAL_ENV := `echo ${VIRTUAL_ENV:-.venv}`
export BIN := VIRTUAL_ENV + "/bin"
export PIP := BIN + "/python -m pip"
# list available commands
default:
@{{ just_executable() }} --list
# clean up temporary files
clean:
rm -rf .venv
# ensure valid virtualenv
virtualenv:
#!/usr/bin/env bash
# allow users to specify python version in .env
PYTHON_VERSION=${PYTHON_VERSION:-python3.8}
# create venv and upgrade pip
test -d $VIRTUAL_ENV || { $PYTHON_VERSION -m venv $VIRTUAL_ENV && $PIP install --upgrade pip; }
# ensure we have pip-tools so we can run pip-compile
test -e $BIN/pip-compile || $PIP install pip-tools
_compile src dst *args: virtualenv
#!/usr/bin/env bash
# exit if src file is older than dst file (-nt = 'newer than', but we negate with || to avoid error exit code)
test "${FORCE:-}" = "true" -o {{ src }} -nt {{ dst }} || exit 0
$BIN/pip-compile --allow-unsafe --output-file={{ dst }} {{ src }} {{ args }}
# update requirements.prod.txt if pyproject.toml has changed
requirements-prod *args:
{{ just_executable() }} _compile pyproject.toml requirements.prod.txt {{ args }}
# update requirements.dev.txt if requirements.dev.in has changed
requirements-dev *args: requirements-prod
{{ just_executable() }} _compile requirements.dev.in requirements.dev.txt {{ args }}
# ensure prod requirements installed and up to date
prodenv: virtualenv requirements-prod
#!/usr/bin/env bash
# exit if .txt file has not changed since we installed them (-nt == "newer than', but we negate with || to avoid error exit code)
test requirements.prod.txt -nt $VIRTUAL_ENV/.prod || exit 0
$PIP install -r requirements.prod.txt
touch $VIRTUAL_ENV/.prod
# upgrade dev or prod dependencies (specify package to upgrade single package, all by default)
upgrade env package="": virtualenv
#!/usr/bin/env bash
opts="--upgrade"
test -z "{{ package }}" || opts="--upgrade-package {{ package }}"
FORCE=true {{ just_executable() }} requirements-{{ env }} $opts
# && dependencies are run after the recipe has run. Needs just>=0.9.9. This is
# a killer feature over Makefiles.
#
# ensure dev requirements installed and up to date
devenv: prodenv requirements-dev && install-precommit
#!/usr/bin/env bash
# exit if .txt file has not changed since we installed them (-nt == "newer than', but we negate with || to avoid error exit code)
test requirements.dev.txt -nt $VIRTUAL_ENV/.dev || exit 0
$PIP install -r requirements.dev.txt
touch $VIRTUAL_ENV/.dev
build-fastparser-wheel: devenv
#!/usr/bin/env bash
rm -rf fastparser/dist
$BIN/python -m build --wheel fastparser
mv fastparser/dist/*.whl .
# install fast YAML parsing library
install-fastparser: devenv
$PIP install --only-binary ':all:' file:///$PWD/opensafely_fastparser-1.0-py3-none-any.whl
# ensure precommit is installed
install-precommit:
#!/usr/bin/env bash
BASE_DIR=$(git rev-parse --show-toplevel)
test -f $BASE_DIR/.git/hooks/pre-commit || $BIN/pre-commit install
# *args is variadic, 0 or more. This allows us to do `just test -k match`, for example.
# Run the tests
test *args: devenv
$BIN/coverage run --module pytest {{ args }}
$BIN/coverage report || $BIN/coverage html
package-build: virtualenv
rm -rf dist
$PIP install build
$BIN/python -m build
package-test type: package-build
#!/usr/bin/env bash
VENV="test-{{ type }}"
distribution_suffix="{{ if type == "wheel" { "whl" } else { "tar.gz" } }}"
# build a fresh venv
python -m venv $VENV
# clean up after ourselves, even if there are errors
trap 'rm -rf $VENV' EXIT
# ensure a modern pip
$VENV/bin/pip install pip --upgrade
# install the wheel distribution
$VENV/bin/pip install dist/*."$distribution_suffix"
# Minimal check that it has actually built correctly
$VENV/bin/python -c "import pipeline"
# check we haven't packaged tests with it
unzip -Z -1 dist/*.whl | grep -vq "^tests/"
ruff *args=".": devenv
$BIN/ruff format --diff --quiet .
$BIN/ruff check --output-format=full .
mypy: devenv
$BIN/mypy
# check format and linting
check: ruff mypy
# fix format and linting
fix: devenv
$BIN/ruff format .
$BIN/ruff check --fix .
# Run the dev project
run: devenv
echo "Not implemented yet"
# Cut a release of this package
release:
#!/usr/bin/env bash
set -euo pipefail
CALVER=$(date -u +"%Y.%m.%d.%H%M%S")
git checkout main
git pull
git checkout -b release-$CALVER
echo $CALVER > version
git add version
git commit --message "Release $CALVER"
gh pr create --fill