1.7.1 Release for Linux

• Added user notification (in log window) if estimated values fall on a range or initial value boundary
• Added WhatsThis help for log window
• Fixed Stop Button not stopping an estimation in Windows

1.7.0 Release for Windows

N.B. The table summarymodelfit was changed. Please drop and recreate it or import the 3 tables in the sample_data directory.

• Added HPC import feature
• Added optimize table functionality under Utilities main menu item
• Added Save/Load Layout feature
• Added Rescale X-Axis button in Output Controls to “nicely” scale the x-axis when so desired
• Added size of tables and ability to sort to View->Table Names
• Added menu item to view last Single run or HPC run or Multi-run (and accompanying toolbar S/M button)
• Added check to not allow user to re-run from Model Review if selected an HPC run and not to throw error if they try
• Added number of estimated parameters by species to Run Summary
• Added: Generate Model Summary feature if user selects in HPC run
• Added: Require all p values be > 0.
• Fixed Output Controls Species box not being checked by default
• Fixed application still thinking it’s a multi-run after importing HPC data
• Fixed ensemble data being correctly deleted when writing to outputbiomassensemble table
• Fixed switching to Retrospective Analysis not showing correct plot sometimes
• Fixed bug with extracting parameters in incorrect order
• Fixed Historical checkbox remaining checked when leaving the Forecast GUI
• Fixed when loading a new model:
  -- predation doesn’t load
  -- user not prompted to load a model
  -- output plot should be cleared
• Fixed MSSPM so it can run diagnostics after importing HPC data
• Fixed: Calculate K(i), i.e., number of estimated parameters per species and confirm model AIC values agree with Howard’s
• Fixed: Estimated values don’t change when changing from single to multi-run view
• Fixed: Model Fit summary isn’t updated when switching from single to multi
• Fixed: Crash on switching projects and loading a model
• Fixed: After import model or copy model the model name in title bar isn’t updated
• Fixed: When saving models, srun vs mrun info is not saved
• Modified Model AIC to be sum(AIC) for all species and not an average
• Modified summary statistics by removing year = 0 from all summary statistic calculations
• Modified all databases; either import them all or drop table summarymodelfit and click Utilities->Create Tables
• Modified: Saved new versions of the 3 databases to sample_data directory: SimTest, SimNOBA, and GeorgesBank
• Confirmed: Make sure Generate Model Summary works for more than one HPC run
• Confirmed: Skipping first year for all fits (i.e., SS, MxLk, …)

1.7.0 Release for Linux

N.B. The table summarymodelfit was changed. Please drop and recreate it or import the 3 tables in the sample_data directory.

• Added HPC import feature
• Added optimize table functionality under Utilities main menu item
• Added Save/Load Layout feature
• Added Rescale X-Axis button in Output Controls to “nicely” scale the x-axis when so desired
• Added size of tables and ability to sort to View->Table Names
• Added menu item to view last Single run or HPC run or Multi-run (and accompanying toolbar S/M button)
• Added check to not allow user to re-run from Model Review if selected an HPC run and not to throw error if they try
• Added number of estimated parameters by species to Run Summary
• Added: Generate Model Summary feature if user selects in HPC run
• Added: Require all p values be > 0.
• Fixed Output Controls Species box not being checked by default
• Fixed application still thinking it’s a multi-run after importing HPC data
• Fixed ensemble data being correctly deleted when writing to outputbiomassensemble table
• Fixed switching to Retrospective Analysis not showing correct plot sometimes
• Fixed bug with extracting parameters in incorrect order
• Fixed Historical checkbox remaining checked when leaving the Forecast GUI
• Fixed when loading a new model:
  -- predation doesn’t load
  -- user not prompted to load a model
  -- output plot should be cleared
• Fixed MSSPM so it can run diagnostics after importing HPC data
• Fixed: Calculate K(i), i.e., number of estimated parameters per species and confirm model AIC values agree with Howard’s
• Fixed: Estimated values don’t change when changing from single to multi-run view
• Fixed: Model Fit summary isn’t updated when switching from single to multi
• Fixed: Crash on switching projects and loading a model
• Fixed: After import model or copy model the model name in title bar isn’t updated
• Fixed: When saving models, srun vs mrun info is not saved
• Modified Model AIC to be sum(AIC) for all species and not an average
• Modified summary statistics by removing year = 0 from all summary statistic calculations
• Modified all databases; either import them all or drop table summarymodelfit and click Utilities->Create Tables
• Modified: Saved new versions of the 3 databases to sample_data directory: SimTest, SimNOBA, and GeorgesBank
• Confirmed: Make sure Generate Model Summary works for more than one HPC run
• Confirmed: Skipping first year for all fits (i.e., SS, MxLk, …)

1.6.4 Release for Windows

• Added functionality to toggle species name as main chart title (useful for panel plots)
• Modified Remora panel plot functionality for publishing font attributes
• Fixed bug with Catch uncertainty not be working in REMORA

1.6.4 Release for Linux

• Added functionality to toggle species name as main chart title (useful for panel plots)
• Modified Remora panel plot functionality for publishing font attributes
• Fixed bug with Catch uncertainty not be working in REMORA

1.6.3 Release for Windows

• Fixed Exploitation bug with group=System
• Fixed formatting bug with Multi-Scenario plots

1.6.3 Release for Linux

• Fixed Exploitation bug with group=System
• Fixed formatting bug with Multi-Scenario plots

1.6.2 Release for Windows

• Added functionality for user to set chart resolution mode for publication
• Added publication chart settings in output control panel
  -- Allow title, legend, and grid lines to be optional
  -- Allow user to select font and font size for axis labels and numeric axes scale
  -- Allow user to adjust axis line thickness
• Modified ^3 notation with superscript notation for y labels
• Modified B MSY, MSY, and F MSY graphs for publication
• Modified Diagnostics, Forecasts, and REMORA functionality for chart publication readiness.
• Fixed bug in Project tab when doing an import after setting the project directory resulting in the previous directory being restored to the widget

1.6.2 Release for Linux

• Added functionality for user to set chart resolution mode for publication
• Added publication chart settings in output control panel
  -- Allow title, legend, and grid lines to be optional
  -- Allow user to select font and font size for axis labels and numeric axes scale
  -- Allow user to adjust axis line thickness
• Modified ^3 notation with superscript notation for y labels
• Modified B MSY, MSY, and F MSY graphs for publication
• Modified Diagnostics, Forecasts, and REMORA functionality for chart publication readiness.
• Fixed bug in Project tab when import after setting directory, the previous directory is restored in widget

1.6.1 Release for Windows

• Fixed bug with Competition matrix not behaving exactly the same as Predation matrix
• Fixed bug with blanks sometimes written to fit to catch table
• Fixed bug with nmfDatabase::loadMatrix loading in column major order instead of row major when creating simulated biomass
• Fixed bug with paste sometimes omitting the last copied row (happened when pasting from a non-downloaded google spreadsheet)