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GitHub Actions run of pytest has problems #240

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mbopfNIH opened this issue Jun 9, 2023 · 2 comments
Open

GitHub Actions run of pytest has problems #240

mbopfNIH opened this issue Jun 9, 2023 · 2 comments
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@mbopfNIH
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mbopfNIH commented Jun 9, 2023 •
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  • Errors are reported, but the Action still succeeds
  • The --log-cli-level=INFO is not being output to the log
  • Add in bioformats2raw library
  • Don't run test target if there are no code changes
@mbopfNIH
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It appears that the pytest debug output is now being displayed.
Need to add install of bioformats2raw to the build.

@mbopfNIH mbopfNIH self-assigned this Jun 30, 2023
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Added the bioformats2raw install in main.yml which also requires java to run.

Still need to mark the build as failed when the tests fail, but will wait for Prefect2 as that should make failure detection much easier.

@philipmac philipmac mentioned this issue Nov 28, 2023
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