diff --git a/conf/modules.config b/conf/modules.config index 692f4c10..2e96607d 100644 --- a/conf/modules.config +++ b/conf/modules.config @@ -102,7 +102,7 @@ process { withName: FUSIONINSPECTOR { ext.when = { !params.skip_vis } ext.args = { params.fusioninspector_limitSjdbInsertNsj != 1000000 ? "--STAR_xtra_params \"--limitSjdbInsertNsj ${params.fusioninspector_limitSjdbInsertNsj}\"" : '' } - ext.args2 = '--extreme_sensitivity' + ext.args2 = '--extreme_sensitivity --annotate --examine_coding_effect --predict_cosmic_like' } withName: FUSIONREPORT {