From f876680cd43623f2db9933f9819ca4380c34c0d0 Mon Sep 17 00:00:00 2001 From: Annick Renevey <47788523+rannick@users.noreply.github.com> Date: Mon, 18 Sep 2023 10:56:44 +0200 Subject: [PATCH] Update fusionreport to 2.1.5p4 to fix 403 error in downloading databases --- CHANGELOG.md | 1 + modules/local/fusionreport/detect/main.nf | 2 +- modules/local/fusionreport/download/main.nf | 2 +- 3 files changed, 3 insertions(+), 2 deletions(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index 0be1dba3..3d5b6e65 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -22,6 +22,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0 - Provide gene count file by default when running STAR_FOR_STARFUSION [#385](https://github.com/nf-core/rnafusion/pull/385) - Fix fusion-report issue with MACOXS directories [#386](https://github.com/nf-core/rnafusion/pull/386) - The fusion lists is updated to contain two branches, one in case no fusions are detected and one for if fusions are detected, that will be used to feed to fusioninspector, megafusion, arriba visualisation [#388](https://github.com/nf-core/rnafusion/pull/388) +- Update fusionreport to 2.1.5p4 to fix 403 error in downloading databases ### Removed diff --git a/modules/local/fusionreport/detect/main.nf b/modules/local/fusionreport/detect/main.nf index 20db8c2f..38809803 100644 --- a/modules/local/fusionreport/detect/main.nf +++ b/modules/local/fusionreport/detect/main.nf @@ -4,7 +4,7 @@ process FUSIONREPORT { // Note: 2.7X indices incompatible with AWS iGenomes. conda "bioconda::star=2.7.9a" - container "docker.io/clinicalgenomics/fusion-report:2.1.5p2.1" + container "docker.io/clinicalgenomics/fusion-report:2.1.5p4" input: diff --git a/modules/local/fusionreport/download/main.nf b/modules/local/fusionreport/download/main.nf index c54910a1..3ab1bc03 100644 --- a/modules/local/fusionreport/download/main.nf +++ b/modules/local/fusionreport/download/main.nf @@ -4,7 +4,7 @@ process FUSIONREPORT_DOWNLOAD { // Note: 2.7X indices incompatible with AWS iGenomes. conda "bioconda::star=2.7.9a" - container "docker.io/clinicalgenomics/fusion-report:2.1.5p3" + container "docker.io/clinicalgenomics/fusion-report:2.1.5p4" input: val(username)