From ea74110aac9d63001ce0d682f4ddbb034188a4fc Mon Sep 17 00:00:00 2001
From: Victor Lin <13424970+victorlin@users.noreply.github.com>
Date: Thu, 22 Aug 2024 13:41:30 -0700
Subject: [PATCH] =?UTF-8?q?=F0=9F=9A=A7=20Install=20Snakemake=208.1.1?=
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---
 Dockerfile | 7 ++++---
 1 file changed, 4 insertions(+), 3 deletions(-)

diff --git a/Dockerfile b/Dockerfile
index 44394aa..ed1aa5c 100644
--- a/Dockerfile
+++ b/Dockerfile
@@ -258,9 +258,10 @@ RUN python3 -m venv /usr/local/libexec/awscli \
  && ln -sv /usr/local/libexec/awscli/bin/aws /usr/local/bin/aws
 
 # Install Snakemake and related optional dependencies.
-# Pinned to 7.32.3 for stability (2023-09-09)
-# Pulp>=2.8.0 breaks snakemake <=8.1.1, see https://github.com/snakemake/snakemake/issues/2607
-RUN pip3 install snakemake[reports]==7.32.3 "pulp<2.8"
+# FIXME: Pin a later version? I chose 8.1.1 to remove the pulp pin.
+# Consider skimming the changelog.
+# https://snakemake.readthedocs.io/en/stable/project_info/history.html
+RUN pip3 install snakemake[reports]==8.1.1
 # Google Cloud Storage package is required for Snakemake to fetch remote files
 # from Google Storage URIs.
 RUN pip3 install google-cloud-storage==2.7.0