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Log.final.out
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Log.final.out
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Started job on | Apr 28 03:05:29
Started mapping on | Apr 28 04:55:32
Finished on | Apr 28 06:44:22
Mapping speed, Million of reads per hour | 0.55
Number of input reads | 1000000
Average input read length | 300
UNIQUE READS:
Uniquely mapped reads number | 34446
Uniquely mapped reads % | 3.44%
Average mapped length | 291.74
Number of splices: Total | 33971
Number of splices: Annotated (sjdb) | 33469
Number of splices: GT/AG | 32825
Number of splices: GC/AG | 186
Number of splices: AT/AC | 3
Number of splices: Non-canonical | 957
Mismatch rate per base, % | 0.98%
Deletion rate per base | 0.04%
Deletion average length | 2.68
Insertion rate per base | 0.04%
Insertion average length | 2.29
MULTI-MAPPING READS:
Number of reads mapped to multiple loci | 1256
% of reads mapped to multiple loci | 0.13%
Number of reads mapped to too many loci | 7
% of reads mapped to too many loci | 0.00%
UNMAPPED READS:
% of reads unmapped: too many mismatches | 0.00%
% of reads unmapped: too short | 93.72%
% of reads unmapped: other | 2.71%
CHIMERIC READS:
Number of chimeric reads | 0
% of chimeric reads | 0.00%