diff --git a/.github/workflows/python-script.yml b/.github/workflows/python-script.yml index 38c2950..a35d071 100644 --- a/.github/workflows/python-script.yml +++ b/.github/workflows/python-script.yml @@ -9,6 +9,8 @@ on: jobs: run-scripts: runs-on: ubuntu-latest + permissions: + contents: write steps: - name: Check out repository diff --git a/data/cleaned_napari_plugins.csv b/data/cleaned_napari_plugins.csv index 68c327b..1ae8eeb 100644 --- a/data/cleaned_napari_plugins.csv +++ b/data/cleaned_napari_plugins.csv @@ -1,4 +1,4 @@ -,name,version,display_name,summary,author,license,home_page,id,package_types,description,home,public,owner_company,owner_location,owner_login,owner_name,owner_url,owner_description,owner_created_at,owner_user_type,full_name,url,html_url,versions,latest_version,platforms_noarch,conda_platforms,revision,dev_url,builds,releases_0_version,releases_0_full_name,watchers,upvoted,created_at,modified_at,files_0_distribution_type,files_0_basename,files_0_attrs_build_number,files_0_attrs_license,files_0_attrs_has_prefix,files_0_attrs_noarch,files_0_attrs_depends,files_0_attrs_subdir,files_0_attrs_timestamp,files_0_attrs_target-triplet,files_0_attrs_build,files_0_upload_time,files_0_md5,files_0_sha256,files_0_size,files_0_full_name,files_0_download_url,files_0_type,files_0_version,files_0_owner,files_0_labels,visibility,icon,schema_version,contributions_commands_0_id,contributions_commands_0_title,contributions_commands_0_python_name,contributions_readers_0_command,contributions_readers_0_filename_patterns,contributions_readers_0_accepts_directories,package_metadata_metadata_version,package_metadata_name,package_metadata_version,package_metadata_platform,package_metadata_summary,package_metadata_description,package_metadata_description_content_type,package_metadata_home_page,package_metadata_author,package_metadata_author_email,package_metadata_license,package_metadata_classifier,package_metadata_requires_dist,package_metadata_requires_python,package_metadata_project_url,package_metadata_provides_extra,npe1_shim,releases_1_version,releases_1_full_name,releases_2_version,releases_2_full_name,releases_3_version,releases_3_full_name,files_1_distribution_type,files_1_basename,files_1_attrs_build_number,files_1_attrs_license,files_1_attrs_has_prefix,files_1_attrs_noarch,files_1_attrs_depends,files_1_attrs_build,files_1_attrs_timestamp,files_1_attrs_target-triplet,files_1_attrs_subdir,files_1_upload_time,files_1_md5,files_1_sha256,files_1_size,files_1_full_name,files_1_download_url,files_1_type,files_1_version,files_1_owner,files_1_labels,files_2_distribution_type,files_2_basename,files_2_attrs_build_number,files_2_attrs_license,files_2_attrs_has_prefix,files_2_attrs_noarch,files_2_attrs_depends,files_2_attrs_subdir,files_2_attrs_timestamp,files_2_attrs_target-triplet,files_2_attrs_build,files_2_upload_time,files_2_md5,files_2_sha256,files_2_size,files_2_full_name,files_2_download_url,files_2_type,files_2_version,files_2_owner,files_2_labels,files_3_distribution_type,files_3_basename,files_3_attrs_target-triplet,files_3_attrs_has_prefix,files_3_attrs_subdir,files_3_attrs_build,files_3_attrs_build_number,files_3_attrs_depends,files_3_attrs_license,files_3_attrs_noarch,files_3_attrs_timestamp,files_3_upload_time,files_3_md5,files_3_sha256,files_3_size,files_3_full_name,files_3_download_url,files_3_type,files_3_version,files_3_owner,files_3_labels,categories,contributions_commands_1_id,contributions_commands_1_title,contributions_commands_1_python_name,contributions_commands_2_id,contributions_commands_2_title,contributions_commands_2_python_name,contributions_commands_3_id,contributions_commands_3_title,contributions_commands_3_python_name,contributions_widgets_0_command,contributions_widgets_0_display_name,contributions_widgets_0_autogenerate,contributions_widgets_1_command,contributions_widgets_1_display_name,contributions_widgets_1_autogenerate,contributions_widgets_2_command,contributions_widgets_2_display_name,contributions_widgets_2_autogenerate,contributions_widgets_3_command,contributions_widgets_3_display_name,contributions_widgets_3_autogenerate,contributions_commands_4_id,contributions_commands_4_title,contributions_commands_4_python_name,contributions_writers_0_command,contributions_writers_0_layer_types,contributions_writers_0_display_name,contributions_writers_1_command,contributions_writers_1_layer_types,contributions_writers_1_filename_extensions,contributions_writers_1_display_name,contributions_sample_data_0_command,contributions_sample_data_0_key,contributions_sample_data_0_display_name,releases_4_version,releases_4_full_name,releases_5_version,releases_5_full_name,releases_6_version,releases_6_full_name,files_4_distribution_type,files_4_basename,files_4_attrs_build_number,files_4_attrs_license,files_4_attrs_has_prefix,files_4_attrs_noarch,files_4_attrs_depends,files_4_attrs_subdir,files_4_attrs_timestamp,files_4_attrs_target-triplet,files_4_attrs_build,files_4_upload_time,files_4_md5,files_4_sha256,files_4_size,files_4_full_name,files_4_download_url,files_4_type,files_4_version,files_4_owner,files_4_labels,files_5_distribution_type,files_5_basename,files_5_attrs_build_number,files_5_attrs_license,files_5_attrs_has_prefix,files_5_attrs_noarch,files_5_attrs_depends,files_5_attrs_subdir,files_5_attrs_timestamp,files_5_attrs_target-triplet,files_5_attrs_build,files_5_upload_time,files_5_md5,files_5_sha256,files_5_size,files_5_full_name,files_5_download_url,files_5_type,files_5_version,files_5_owner,files_5_labels,files_6_distribution_type,files_6_basename,files_6_attrs_target-triplet,files_6_attrs_has_prefix,files_6_attrs_subdir,files_6_attrs_build,files_6_attrs_build_number,files_6_attrs_depends,files_6_attrs_license,files_6_attrs_noarch,files_6_attrs_timestamp,files_6_upload_time,files_6_md5,files_6_sha256,files_6_size,files_6_full_name,files_6_download_url,files_6_type,files_6_version,files_6_owner,files_6_labels,contributions_sample_data_1_command,contributions_sample_data_1_key,contributions_sample_data_1_display_name,contributions_commands_5_id,contributions_commands_5_title,contributions_commands_5_python_name,releases_7_version,releases_7_full_name,releases_8_version,releases_8_full_name,files_7_distribution_type,files_7_basename,files_7_attrs_build_number,files_7_attrs_license,files_7_attrs_has_prefix,files_7_attrs_noarch,files_7_attrs_depends,files_7_attrs_subdir,files_7_attrs_timestamp,files_7_attrs_target-triplet,files_7_attrs_build,files_7_upload_time,files_7_md5,files_7_sha256,files_7_size,files_7_full_name,files_7_download_url,files_7_type,files_7_version,files_7_owner,files_7_labels,files_8_distribution_type,files_8_basename,files_8_attrs_target-triplet,files_8_attrs_has_prefix,files_8_attrs_subdir,files_8_attrs_build,files_8_attrs_build_number,files_8_attrs_depends,files_8_attrs_license,files_8_attrs_noarch,files_8_attrs_timestamp,files_8_upload_time,files_8_md5,files_8_sha256,files_8_size,files_8_full_name,files_8_download_url,files_8_type,files_8_version,files_8_owner,files_8_labels,contributions_commands_6_id,contributions_commands_6_title,contributions_commands_6_python_name,contributions_commands_7_id,contributions_commands_7_title,contributions_commands_7_python_name,contributions_commands_8_id,contributions_commands_8_title,contributions_commands_8_python_name,contributions_commands_9_id,contributions_commands_9_title,contributions_commands_9_python_name,contributions_commands_10_id,contributions_commands_10_title,contributions_commands_10_python_name,contributions_commands_11_id,contributions_commands_11_title,contributions_commands_11_python_name,contributions_writers_0_filename_extensions,contributions_widgets_4_command,contributions_widgets_4_display_name,contributions_widgets_4_autogenerate,contributions_widgets_5_command,contributions_widgets_5_display_name,contributions_widgets_5_autogenerate,contributions_widgets_6_command,contributions_widgets_6_display_name,contributions_widgets_6_autogenerate,contributions_widgets_7_command,contributions_widgets_7_display_name,contributions_widgets_7_autogenerate,files_9_distribution_type,files_9_basename,files_9_attrs_target-triplet,files_9_attrs_has_prefix,files_9_attrs_subdir,files_9_attrs_build,files_9_attrs_build_number,files_9_attrs_depends,files_9_attrs_license,files_9_attrs_noarch,files_9_attrs_timestamp,files_9_upload_time,files_9_md5,files_9_sha256,files_9_size,files_9_full_name,files_9_download_url,files_9_type,files_9_version,files_9_owner,files_9_labels,releases_9_version,releases_9_full_name,files_10_distribution_type,files_10_basename,files_10_attrs_target-triplet,files_10_attrs_has_prefix,files_10_attrs_subdir,files_10_attrs_build,files_10_attrs_build_number,files_10_attrs_depends,files_10_attrs_license,files_10_attrs_timestamp,files_10_upload_time,files_10_md5,files_10_sha256,files_10_size,files_10_full_name,files_10_download_url,files_10_type,files_10_version,files_10_owner,files_10_labels,files_11_distribution_type,files_11_basename,files_11_attrs_target-triplet,files_11_attrs_has_prefix,files_11_attrs_subdir,files_11_attrs_build,files_11_attrs_build_number,files_11_attrs_depends,files_11_attrs_license,files_11_attrs_timestamp,files_11_upload_time,files_11_md5,files_11_sha256,files_11_size,files_11_full_name,files_11_download_url,files_11_type,files_11_version,files_11_owner,files_11_labels,files_12_distribution_type,files_12_basename,files_12_attrs_target-triplet,files_12_attrs_has_prefix,files_12_attrs_subdir,files_12_attrs_build,files_12_attrs_build_number,files_12_attrs_depends,files_12_attrs_license,files_12_attrs_timestamp,files_12_upload_time,files_12_md5,files_12_sha256,files_12_size,files_12_full_name,files_12_download_url,files_12_type,files_12_version,files_12_owner,files_12_labels,contributions_sample_data_2_command,contributions_sample_data_2_key,contributions_sample_data_2_display_name +,name,version,display_name,summary,author,license,home_page,id,package_types,description,home,public,owner_company,owner_location,owner_login,owner_name,owner_url,owner_description,owner_created_at,owner_user_type,full_name,url,html_url,versions,latest_version,platforms_noarch,conda_platforms,revision,dev_url,builds,releases_0_version,releases_0_full_name,watchers,upvoted,created_at,modified_at,files_0_distribution_type,files_0_basename,files_0_attrs_build_number,files_0_attrs_license,files_0_attrs_has_prefix,files_0_attrs_noarch,files_0_attrs_depends,files_0_attrs_subdir,files_0_attrs_timestamp,files_0_attrs_target-triplet,files_0_attrs_build,files_0_upload_time,files_0_md5,files_0_sha256,files_0_size,files_0_full_name,files_0_download_url,files_0_type,files_0_version,files_0_owner,files_0_labels,visibility,icon,schema_version,contributions_commands_0_id,contributions_commands_0_title,contributions_commands_0_python_name,contributions_readers_0_command,contributions_readers_0_filename_patterns,contributions_readers_0_accepts_directories,package_metadata_metadata_version,package_metadata_name,package_metadata_version,package_metadata_platform,package_metadata_summary,package_metadata_description,package_metadata_description_content_type,package_metadata_home_page,package_metadata_author,package_metadata_author_email,package_metadata_license,package_metadata_classifier,package_metadata_requires_dist,package_metadata_requires_python,package_metadata_project_url,package_metadata_provides_extra,npe1_shim,releases_1_version,releases_1_full_name,releases_2_version,releases_2_full_name,releases_3_version,releases_3_full_name,files_1_distribution_type,files_1_basename,files_1_attrs_build_number,files_1_attrs_license,files_1_attrs_has_prefix,files_1_attrs_noarch,files_1_attrs_depends,files_1_attrs_build,files_1_attrs_timestamp,files_1_attrs_target-triplet,files_1_attrs_subdir,files_1_upload_time,files_1_md5,files_1_sha256,files_1_size,files_1_full_name,files_1_download_url,files_1_type,files_1_version,files_1_owner,files_1_labels,files_2_distribution_type,files_2_basename,files_2_attrs_build_number,files_2_attrs_license,files_2_attrs_has_prefix,files_2_attrs_noarch,files_2_attrs_depends,files_2_attrs_subdir,files_2_attrs_timestamp,files_2_attrs_target-triplet,files_2_attrs_build,files_2_upload_time,files_2_md5,files_2_sha256,files_2_size,files_2_full_name,files_2_download_url,files_2_type,files_2_version,files_2_owner,files_2_labels,files_3_distribution_type,files_3_basename,files_3_attrs_target-triplet,files_3_attrs_has_prefix,files_3_attrs_subdir,files_3_attrs_build,files_3_attrs_build_number,files_3_attrs_depends,files_3_attrs_license,files_3_attrs_noarch,files_3_attrs_timestamp,files_3_upload_time,files_3_md5,files_3_sha256,files_3_size,files_3_full_name,files_3_download_url,files_3_type,files_3_version,files_3_owner,files_3_labels,categories,contributions_commands_1_id,contributions_commands_1_title,contributions_commands_1_python_name,contributions_commands_2_id,contributions_commands_2_title,contributions_commands_2_python_name,contributions_commands_3_id,contributions_commands_3_title,contributions_commands_3_python_name,contributions_widgets_0_command,contributions_widgets_0_display_name,contributions_widgets_0_autogenerate,contributions_widgets_1_command,contributions_widgets_1_display_name,contributions_widgets_1_autogenerate,contributions_widgets_2_command,contributions_widgets_2_display_name,contributions_widgets_2_autogenerate,contributions_widgets_3_command,contributions_widgets_3_display_name,contributions_widgets_3_autogenerate,contributions_commands_4_id,contributions_commands_4_title,contributions_commands_4_python_name,contributions_writers_0_command,contributions_writers_0_layer_types,contributions_writers_0_display_name,contributions_writers_1_command,contributions_writers_1_layer_types,contributions_writers_1_filename_extensions,contributions_writers_1_display_name,contributions_sample_data_0_command,contributions_sample_data_0_key,contributions_sample_data_0_display_name,releases_4_version,releases_4_full_name,releases_5_version,releases_5_full_name,releases_6_version,releases_6_full_name,files_4_distribution_type,files_4_basename,files_4_attrs_build_number,files_4_attrs_license,files_4_attrs_has_prefix,files_4_attrs_noarch,files_4_attrs_depends,files_4_attrs_subdir,files_4_attrs_timestamp,files_4_attrs_target-triplet,files_4_attrs_build,files_4_upload_time,files_4_md5,files_4_sha256,files_4_size,files_4_full_name,files_4_download_url,files_4_type,files_4_version,files_4_owner,files_4_labels,files_5_distribution_type,files_5_basename,files_5_attrs_build_number,files_5_attrs_license,files_5_attrs_has_prefix,files_5_attrs_noarch,files_5_attrs_depends,files_5_attrs_subdir,files_5_attrs_timestamp,files_5_attrs_target-triplet,files_5_attrs_build,files_5_upload_time,files_5_md5,files_5_sha256,files_5_size,files_5_full_name,files_5_download_url,files_5_type,files_5_version,files_5_owner,files_5_labels,files_6_distribution_type,files_6_basename,files_6_attrs_target-triplet,files_6_attrs_has_prefix,files_6_attrs_subdir,files_6_attrs_build,files_6_attrs_build_number,files_6_attrs_depends,files_6_attrs_license,files_6_attrs_noarch,files_6_attrs_timestamp,files_6_upload_time,files_6_md5,files_6_sha256,files_6_size,files_6_full_name,files_6_download_url,files_6_type,files_6_version,files_6_owner,files_6_labels,contributions_sample_data_1_command,contributions_sample_data_1_key,contributions_sample_data_1_display_name,contributions_commands_5_id,contributions_commands_5_title,contributions_commands_5_python_name,releases_7_version,releases_7_full_name,releases_8_version,releases_8_full_name,files_7_distribution_type,files_7_basename,files_7_attrs_build_number,files_7_attrs_license,files_7_attrs_has_prefix,files_7_attrs_noarch,files_7_attrs_depends,files_7_attrs_subdir,files_7_attrs_timestamp,files_7_attrs_target-triplet,files_7_attrs_build,files_7_upload_time,files_7_md5,files_7_sha256,files_7_size,files_7_full_name,files_7_download_url,files_7_type,files_7_version,files_7_owner,files_7_labels,files_8_distribution_type,files_8_basename,files_8_attrs_target-triplet,files_8_attrs_has_prefix,files_8_attrs_subdir,files_8_attrs_build,files_8_attrs_build_number,files_8_attrs_depends,files_8_attrs_license,files_8_attrs_noarch,files_8_attrs_timestamp,files_8_upload_time,files_8_md5,files_8_sha256,files_8_size,files_8_full_name,files_8_download_url,files_8_type,files_8_version,files_8_owner,files_8_labels,contributions_commands_6_id,contributions_commands_6_title,contributions_commands_6_python_name,contributions_commands_7_id,contributions_commands_7_title,contributions_commands_7_python_name,contributions_commands_8_id,contributions_commands_8_title,contributions_commands_8_python_name,contributions_commands_9_id,contributions_commands_9_title,contributions_commands_9_python_name,contributions_commands_10_id,contributions_commands_10_title,contributions_commands_10_python_name,contributions_writers_0_filename_extensions,contributions_widgets_4_command,contributions_widgets_4_display_name,contributions_widgets_4_autogenerate,contributions_widgets_5_command,contributions_widgets_5_display_name,contributions_widgets_5_autogenerate,contributions_widgets_6_command,contributions_widgets_6_display_name,contributions_widgets_6_autogenerate,contributions_widgets_7_command,contributions_widgets_7_display_name,contributions_widgets_7_autogenerate,files_9_distribution_type,files_9_basename,files_9_attrs_target-triplet,files_9_attrs_has_prefix,files_9_attrs_subdir,files_9_attrs_build,files_9_attrs_build_number,files_9_attrs_depends,files_9_attrs_license,files_9_attrs_noarch,files_9_attrs_timestamp,files_9_upload_time,files_9_md5,files_9_sha256,files_9_size,files_9_full_name,files_9_download_url,files_9_type,files_9_version,files_9_owner,files_9_labels,files_10_distribution_type,files_10_basename,files_10_attrs_target-triplet,files_10_attrs_has_prefix,files_10_attrs_subdir,files_10_attrs_build,files_10_attrs_build_number,files_10_attrs_depends,files_10_attrs_license,files_10_attrs_noarch,files_10_attrs_timestamp,files_10_upload_time,files_10_md5,files_10_sha256,files_10_size,files_10_full_name,files_10_download_url,files_10_type,files_10_version,files_10_owner,files_10_labels,releases_9_version,releases_9_full_name,files_11_distribution_type,files_11_basename,files_11_attrs_target-triplet,files_11_attrs_has_prefix,files_11_attrs_subdir,files_11_attrs_build,files_11_attrs_build_number,files_11_attrs_depends,files_11_attrs_license,files_11_attrs_timestamp,files_11_upload_time,files_11_md5,files_11_sha256,files_11_size,files_11_full_name,files_11_download_url,files_11_type,files_11_version,files_11_owner,files_11_labels,releases_10_version,releases_10_full_name,files_12_distribution_type,files_12_basename,files_12_attrs_target-triplet,files_12_attrs_has_prefix,files_12_attrs_subdir,files_12_attrs_build,files_12_attrs_build_number,files_12_attrs_depends,files_12_attrs_license,files_12_attrs_timestamp,files_12_upload_time,files_12_md5,files_12_sha256,files_12_size,files_12_full_name,files_12_download_url,files_12_type,files_12_version,files_12_owner,files_12_labels,files_13_distribution_type,files_13_basename,files_13_attrs_target-triplet,files_13_attrs_has_prefix,files_13_attrs_subdir,files_13_attrs_build,files_13_attrs_build_number,files_13_attrs_depends,files_13_attrs_license,files_13_upload_time,files_13_md5,files_13_sha256,files_13_size,files_13_full_name,files_13_download_url,files_13_type,files_13_version,files_13_owner,files_13_labels,contributions_sample_data_2_command,contributions_sample_data_2_key,contributions_sample_data_2_display_name 0,acquifer-napari,0.0.2,acquifer-napari,"Loader plugin for napari, to load Acquifer Imaging Machine datasets in napari, using dask for efficient lazy data-loading.",Laurent Thomas,GPL-3.0-only,,64cbc3f13ea6b131d6fd70ed,['conda'],,https://github.com/acquifer/acquifer-napari,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/acquifer-napari,http://api.anaconda.org/packages/conda-forge/acquifer-napari,http://anaconda.org/conda-forge/acquifer-napari,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/acquifer-napari/0.0.1,1.0,0.0,2023-08-03 15:12:41.971000+00:00,2023-08-03 15:12:50.243000+00:00,conda,noarch/acquifer-napari-0.0.1-pyhd8ed1ab_0.conda,0.0,GPL-3.0-or-later,False,python,"['acquifer', 'napari', 'python >=3.7']",noarch,1691075442130.0,None-any-None,pyhd8ed1ab_0,2023-08-03 15:12:44.279000+00:00,b34c79ac819764693715c0efb0518425,adffc1a96ecf6af545feb32e8e15dc2137771e809c0ff1d573d69e59a309af66,23238.0,conda-forge/acquifer-napari/0.0.1/noarch/acquifer-napari-0.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/acquifer-napari/0.0.1/noarch/acquifer-napari-0.0.1-pyhd8ed1ab_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,acquifer-napari.get_reader,Get Reader,acquifer_napari_plugin._reader:napari_get_reader,acquifer-napari.get_reader,['*'],True,2.1,acquifer-napari,0.0.2,,"Loader plugin for napari, to load Acquifer Imaging Machine datasets in napari, using dask for efficient lazy data-loading.","# acquifer-napari The acquifer-napari plugin allows loading IM04 dataset directory, as multi-dimensional images in napari. @@ -39,7 +39,7 @@ See https://napari.org/stable/plugins/first_plugin.html#add-a-napari-yaml-manife ## Issues If you encounter any problems, please [file an issue](https://github.com/Luxendo/acquifer-napari/issues) along with a detailed description. -",text/markdown,,Laurent Thomas,,GPL-3.0-only,"['Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']","['acquifer', 'napari', 'numpy', 'sortedcontainers', 'dask-image', 'xarray']",>=3.7,"['HomePage, https://acquifer.de', 'Twitter, https://twitter.com/myacquifer', 'Bug Tracker, https://github.com/Luxendo/acquifer-napari/issues', 'Documentation, https://github.com/Luxendo/acquifer-napari#README.md', 'Source Code, https://github.com/Luxendo/acquifer-napari']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +",text/markdown,,Laurent Thomas,,GPL-3.0-only,"['Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']","['acquifer', 'napari', 'numpy', 'sortedcontainers', 'dask-image', 'xarray']",>=3.7,"['HomePage, https://acquifer.de', 'Twitter, https://twitter.com/myacquifer', 'Bug Tracker, https://github.com/Luxendo/acquifer-napari/issues', 'Documentation, https://github.com/Luxendo/acquifer-napari#README.md', 'Source Code, https://github.com/Luxendo/acquifer-napari']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 1,affinder,0.4.0,affinder,Quickly find the affine matrix mapping one image to another using manual correspondence points annotation,Juan Nunez-Iglesias,BSD-3,https://github.com/jni/affinder,61f3aa0e6526fc1f99354023,['conda'],,https://github.com/jni/affinder,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/affinder,http://api.anaconda.org/packages/conda-forge/affinder,http://anaconda.org/conda-forge/affinder,"['0.2.2', '0.2.3', '0.3.2', '0.4.0']",0.4.0,0.4.0,['noarch'],11.0,,"['pyh9208f05_0', 'pyhd8ed1ab_0']",0.2.2,conda-forge/affinder/0.2.2,1.0,0.0,2022-01-28 08:32:11.591000+00:00,2024-06-28 00:57:51.681000+00:00,conda,noarch/affinder-0.2.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui >=0.3.3', 'napari >=0.4.12', 'napari-plugin-engine >=0.1.9', 'numpy', 'python >=3.7', 'scikit-image', 'toolz']",noarch,1643358540132.0,None-any-None,pyhd8ed1ab_0,2022-01-28 08:32:12.232000+00:00,85802246156ff02a6c2aa830ce814e61,None,11303.0,conda-forge/affinder/0.2.2/noarch/affinder-0.2.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/affinder/0.2.2/noarch/affinder-0.2.2-pyhd8ed1ab_0.tar.bz2,conda,0.2.2,conda-forge,['main'],public,,0.2.1,affinder.start_affinder,Start affinder...,affinder:start_affinder,,,,2.1,affinder,0.4.0,,Quickly find the affine matrix mapping one image to another using manual correspondence points annotation,"# Description This GUI plugin allows you to quickly find the affine matrix mapping @@ -139,8 +139,8 @@ issue on the [GitHub repository](https://github.com/jni/affinder). Many plugins may be used in the course of published (or publishable) research, as well as during conference talks and other public facing events. If you'd like to be cited in a particular format, or have a DOI you'd like used, you should provide that information here. -",text/markdown,https://github.com/jni/affinder,Juan Nunez-Iglesias,juan.nunez-iglesias@monash.edu,BSD-3,"['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari >=0.4.17', 'npe2 >=0.1.2', 'numpy', 'scikit-image >=0.19.2', 'magicgui >=0.3.7', 'toolz', ""furo ; extra == 'docs'"", ""myst-parser ; extra == 'docs'"", ""coverage ; extra == 'testing'"", ""pydantic <2 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""scikit-image[data] ; extra == 'testing'"", ""napari[pyqt5] !=0.4.18 ; extra == 'testing'"", ""pygments !=2.16 ; extra == 'testing'"", ""zarr ; extra == 'testing'""]",>=3.9,,"['docs', 'testing']",False,0.2.3,conda-forge/affinder/0.2.3,0.3.2,conda-forge/affinder/0.3.2,0.4.0,conda-forge/affinder/0.4.0,conda,noarch/affinder-0.2.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui >=0.3.7', 'napari >=0.4.15', 'numpy', 'python >=3.7', 'scikit-image >=0.19.2', 'toolz']",pyhd8ed1ab_0,1649943014884.0,None-any-None,noarch,2022-04-14 13:32:31.419000+00:00,1a74767855960f85239c10a445f7b655,None,13483.0,conda-forge/affinder/0.2.3/noarch/affinder-0.2.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/affinder/0.2.3/noarch/affinder-0.2.3-pyhd8ed1ab_0.tar.bz2,conda,0.2.3,conda-forge,['main'],conda,noarch/affinder-0.3.2-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui >=0.3.7', 'napari >=0.4.17', 'npe2 >=0.1.2', 'numpy', 'python >=3.9', 'scikit-image >=0.19.2', 'toolz']",noarch,1691492837340.0,None-any-None,pyhd8ed1ab_0,2023-08-08 11:09:24.676000+00:00,068da29da9e4541a98f7f41b2a2e4d9c,8644a184bc87d35d5a7338ee00c18479c0de554b4416a69191bdc96ff6b0e923,16141.0,conda-forge/affinder/0.3.2/noarch/affinder-0.3.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/affinder/0.3.2/noarch/affinder-0.3.2-pyhd8ed1ab_0.conda,conda,0.3.2,conda-forge,['main'],conda,noarch/affinder-0.4.0-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['magicgui >=0.3.7', 'napari >=0.4.17', 'npe2 >=0.1.2', 'numpy', 'python >=3.9', 'scikit-image >=0.19.2', 'toolz']",BSD-3-Clause,python,1719536150125.0,2024-06-28 00:57:49.882000+00:00,0e33fd0fdf0b8e01f534786200a5be8b,320f882edbb7cfb69321f310edb0b078b0ebb0c5ec83f8da5d61afaaa0eabd6d,19196.0,conda-forge/affinder/0.4.0/noarch/affinder-0.4.0-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/affinder/0.4.0/noarch/affinder-0.4.0-pyh9208f05_0.conda,conda,0.4.0,conda-forge,['main'],['Transformations'],affinder.copy_affine,Copy affine...,affinder:copy_affine,affinder.apply_affine,Apply affine...,affinder:apply_affine,affinder.load_affine,Load affine...,affinder:load_affine,affinder.start_affinder,Start affinder,False,affinder.copy_affine,Copy affine,False,affinder.apply_affine,Apply affine,False,affinder.load_affine,Load affine,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -2,allencell-segmenter-ml,0.1.16rc1,allencell-segmenter-ml,A plugin to leverage ML segmentation in napari,,"Allen Institute Software License – This software license is the 2-clause BSD license plus clause a third clause that +",text/markdown,https://github.com/jni/affinder,Juan Nunez-Iglesias,juan.nunez-iglesias@monash.edu,BSD-3,"['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari >=0.4.17', 'npe2 >=0.1.2', 'numpy', 'scikit-image >=0.19.2', 'magicgui >=0.3.7', 'toolz', ""furo ; extra == 'docs'"", ""myst-parser ; extra == 'docs'"", ""coverage ; extra == 'testing'"", ""pydantic <2 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""scikit-image[data] ; extra == 'testing'"", ""napari[pyqt5] !=0.4.18 ; extra == 'testing'"", ""pygments !=2.16 ; extra == 'testing'"", ""zarr ; extra == 'testing'""]",>=3.9,,"['docs', 'testing']",False,0.2.3,conda-forge/affinder/0.2.3,0.3.2,conda-forge/affinder/0.3.2,0.4.0,conda-forge/affinder/0.4.0,conda,noarch/affinder-0.2.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui >=0.3.7', 'napari >=0.4.15', 'numpy', 'python >=3.7', 'scikit-image >=0.19.2', 'toolz']",pyhd8ed1ab_0,1649943014884.0,None-any-None,noarch,2022-04-14 13:32:31.419000+00:00,1a74767855960f85239c10a445f7b655,None,13483.0,conda-forge/affinder/0.2.3/noarch/affinder-0.2.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/affinder/0.2.3/noarch/affinder-0.2.3-pyhd8ed1ab_0.tar.bz2,conda,0.2.3,conda-forge,['main'],conda,noarch/affinder-0.3.2-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui >=0.3.7', 'napari >=0.4.17', 'npe2 >=0.1.2', 'numpy', 'python >=3.9', 'scikit-image >=0.19.2', 'toolz']",noarch,1691492837340.0,None-any-None,pyhd8ed1ab_0,2023-08-08 11:09:24.676000+00:00,068da29da9e4541a98f7f41b2a2e4d9c,8644a184bc87d35d5a7338ee00c18479c0de554b4416a69191bdc96ff6b0e923,16141.0,conda-forge/affinder/0.3.2/noarch/affinder-0.3.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/affinder/0.3.2/noarch/affinder-0.3.2-pyhd8ed1ab_0.conda,conda,0.3.2,conda-forge,['main'],conda,noarch/affinder-0.4.0-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['magicgui >=0.3.7', 'napari >=0.4.17', 'npe2 >=0.1.2', 'numpy', 'python >=3.9', 'scikit-image >=0.19.2', 'toolz']",BSD-3-Clause,python,1719536150125.0,2024-06-28 00:57:49.882000+00:00,0e33fd0fdf0b8e01f534786200a5be8b,320f882edbb7cfb69321f310edb0b078b0ebb0c5ec83f8da5d61afaaa0eabd6d,19196.0,conda-forge/affinder/0.4.0/noarch/affinder-0.4.0-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/affinder/0.4.0/noarch/affinder-0.4.0-pyh9208f05_0.conda,conda,0.4.0,conda-forge,['main'],['Transformations'],affinder.copy_affine,Copy affine...,affinder:copy_affine,affinder.apply_affine,Apply affine...,affinder:apply_affine,affinder.load_affine,Load affine...,affinder:load_affine,affinder.start_affinder,Start affinder,False,affinder.copy_affine,Copy affine,False,affinder.apply_affine,Apply affine,False,affinder.load_affine,Load affine,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +2,allencell-segmenter-ml,0.1.17,allencell-segmenter-ml,A plugin to leverage ML segmentation in napari,,"Allen Institute Software License – This software license is the 2-clause BSD license plus clause a third clause that prohibits redistribution for commercial purposes without further permission. Copyright © 2024. Allen Institute. All rights reserved. @@ -168,11 +168,16 @@ INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIM GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. -",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,allencell-segmenter-ml.make_qwidget,Allen Cell Segmenter - ML,allencell_ml_segmenter.main.main_widget:MainWidget,,,,2.1,allencell-segmenter-ml,0.1.16rc1,,A plugin to leverage ML segmentation in napari,"# Allencell-segmenter-ml +",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,allencell-segmenter-ml.make_qwidget,Allen Cell Segmenter - ML,allencell_ml_segmenter.main.main_widget:MainWidget,,,,2.1,allencell-segmenter-ml,0.1.17,,A plugin to leverage ML segmentation in napari,"# Allencell-segmenter-ml [![Test and lint](https://github.com/AllenCell/allencell-segmenter-ml/actions/workflows/test_lint.yaml/badge.svg?branch=main&event=push)](https://github.com/AllenCell/allencell-segmenter-ml/actions/workflows/test_lint.yaml) - +## This version is a release candidate currently undergoing testing and development. +Our team is actively working on this plugin and will have an *official release* with additional features very soon. + +Please keep an eye on this page for updates. + +In the meantime, [please report any bugs here.](https://github.com/AllenCell/allencell-segmenter-ml/issues/new/choose) ## What is Allen Cell Segmenter ML @@ -181,11 +186,11 @@ A deep learning-based segmentation Napari plugin to curate datasets, train your ## 📰 News - - **[2024.09.24]** :tada: Initial release of the plugin and Megaseg models! + - **[2024.09.24]** 🎉 Initial dev release of the plugin and Megaseg models! -## :hammer_and_wrench: Installation +## 🛠️ Installation ### System Requirements @@ -269,7 +274,7 @@ To install the latest version of the plugin: pip install allencell-segmenter-ml ``` -### :rotating_light: Post-Installation :rotating_light: +### 🚨 Post-Installation 🚨 > :memo: __NOTE:__ This section is specifically for users with at least one NVIDIA GPU installed on their machine. Not sure if you have an NVIDIA GPU? You can check by running `nvidia-smi` as shown [below](#step-1-checking-cuda-version). If you __do not__ have an NVIDIA GPU system, you can skip this section. @@ -415,7 +420,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ [PyTorch]: https://pytorch.org/get-started/locally/ -",text/markdown,,,"Brian Kim , Chris Hughes , Daniel Saelid ","Allen Institute Software License – This software license is the 2-clause BSD license plus clause a third clause that +",text/markdown,,,,"Allen Institute Software License – This software license is the 2-clause BSD license plus clause a third clause that prohibits redistribution for commercial purposes without further permission. Copyright © 2024. Allen Institute. All rights reserved. @@ -443,7 +448,7 @@ INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIM GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. -","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Science/Research', 'License :: Other/Proprietary License', 'License :: Free for non-commercial use', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['napari >=0.4.18', 'npe2 >=0.6.2', 'numpy', 'hydra-core ==1.3.2', 'bioio', 'tifffile >=2023.4.12', 'watchdog', 'cyto-dl ==0.1.8', 'scikit-image !=0.23.0', ""black >=24.2.0 ; extra == 'dev'"", ""coverage >=7.2.2 ; extra == 'dev'"", ""flake8 >=6.0.0 ; extra == 'dev'"", ""pytest <8.0.0,>=7.2.2 ; extra == 'dev'"", ""pytest-qt >=3.3.0 ; extra == 'dev'"", ""pytest-cov >=2.6.1 ; extra == 'dev'"", ""pyqt5 >=5.15.9 ; extra == 'dev'"", ""bumpver >=2023.1129 ; extra == 'dev'"", ""build >=1.0.3 ; extra == 'dev'"", ""twine >=5.0.0 ; extra == 'dev'"", ""responses ; extra == 'dev'"", ""pytest <8.0.0 ; extra == 'test_lint'"", ""pytest-cov ; extra == 'test_lint'"", ""pytest-qt ; extra == 'test_lint'"", ""qtpy ; extra == 'test_lint'"", ""pyqt5 ; extra == 'test_lint'"", ""black >=24.2.0 ; extra == 'test_lint'"", ""responses ; extra == 'test_lint'"", 'pytest-xvfb ; (sys_platform == ""linux"") and extra == \'test_lint\'']","<3.11,>=3.10","['Homepage, https://github.com/AllenCell/allencell-ml-segmenter', 'Bug Tracker, https://github.com/AllenCell/allencell-ml-segmenter/issues', 'Documentation, https://github.com/AllenCell/allencell-ml-segmenter#README.md', 'User Support, https://github.com/AllenCell/allencell-ml-segmenter/issues']","['dev', 'test_lint']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,allencell-segmenter-ml.make_qwidget,Allen Cell Segmenter - ML,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Science/Research', 'License :: Other/Proprietary License', 'License :: Free for non-commercial use', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['napari >=0.4.18', 'npe2 >=0.6.2', 'numpy', 'hydra-core ==1.3.2', 'bioio', 'tifffile >=2023.4.12', 'watchdog', 'cyto-dl ==0.1.8', 'scikit-image !=0.23.0', ""black >=24.2.0 ; extra == 'dev'"", ""coverage >=7.2.2 ; extra == 'dev'"", ""flake8 >=6.0.0 ; extra == 'dev'"", ""pytest <8.0.0,>=7.2.2 ; extra == 'dev'"", ""pytest-qt >=3.3.0 ; extra == 'dev'"", ""pytest-cov >=2.6.1 ; extra == 'dev'"", ""pyqt5 >=5.15.9 ; extra == 'dev'"", ""bumpver >=2023.1129 ; extra == 'dev'"", ""build >=1.0.3 ; extra == 'dev'"", ""twine >=5.0.0 ; extra == 'dev'"", ""responses ; extra == 'dev'"", ""pytest <8.0.0 ; extra == 'test_lint'"", ""pytest-cov ; extra == 'test_lint'"", ""pytest-qt ; extra == 'test_lint'"", ""qtpy ; extra == 'test_lint'"", ""pyqt5 ; extra == 'test_lint'"", ""black >=24.2.0 ; extra == 'test_lint'"", ""responses ; extra == 'test_lint'"", 'pytest-xvfb ; (sys_platform == ""linux"") and extra == \'test_lint\'']","<3.11,>=3.9","['Homepage, https://github.com/AllenCell/allencell-ml-segmenter', 'Bug Tracker, https://github.com/AllenCell/allencell-ml-segmenter/issues', 'Documentation, https://github.com/AllenCell/allencell-ml-segmenter#README.md', 'User Support, https://github.com/AllenCell/allencell-ml-segmenter/issues']","['dev', 'test_lint']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,allencell-segmenter-ml.make_qwidget,Allen Cell Segmenter - ML,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 3,AlveolEye,0.1.2,AlveolEye,Reads lung slides with AI-driven and classical methods,Joseph Hirsh,MIT,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,AlveolEye.get_reader,Open data with AlveolEye,alveoleye._reader:napari_get_reader,AlveolEye.get_reader,"['.jpeg', '.jpg', '.png', '.tif', '.tiff']",False,2.1,AlveolEye,0.1.2,,Reads lung slides with AI-driven and classical methods," +## What Is Brainways? + + +Brainways is an AI-based tool for automated registration, quantification and generation of brain-wide activity networks based on fluorescence in coronal slices. + +![Brainways UI](docs/assets/brainways-ui.gif) + + +## Why Brainways? + + +Coronal slice registration, cell quantification and whole-brain contrast analysis between experimental conditions should be made easily accessible from a single software, without requiring programming experience. +Customization should be made easy by having a highly flexible pythonic backend. + +## Getting Started + +To install and run brainways, run the following in your python environment: + +```bash +pip install brainways +brainways ui +``` + +Follow our [getting started guide](https://brainways.readthedocs.io/en/latest/getting_started/) for more details. + +## How it works + +Brainways allows users to register, quantify and provide statistical contrast analysis by following several simple steps: + +1. Rigid registration of coronal slices to a 3D atlas. +1. Non-rigid registration of coronal slices to a 3D atlas, to account for individual difference and imperfections in acquisition procedure. +1. Cell detection (using [StarDist](https://github.com/stardist/stardist)). +1. Quantification of cell counts per brain region. +1. Statistical analysis: + * ANOVA contrast analysis. + * PLS (Partial Least Square) analysis. + * Network graph creation. + + + +## Architecture + +Brainways is implemented as three modules. `brainways.ui` contains the GUI implementation as a [napari](https://napari.org/stable/) plugin. `brainways.ui` is using `brainways` as its backend. All of the functionality is implemented in the brainways package. This separation was done to guarantee that brainways is a GUI-agnostic software, and can be fully accessed and manipulated through python code to allow custom complex usage scenarios. The code that was used to train, evaluate and run the automatic registration model resides in `brainways-reg-model`. + +## Development Status + +Brainways is being actively developed by Ben Kantor of Bartal lab, Tel Aviv University, Israel. Our releases can be found [here](https://github.com/bkntr/brainways/releases). + +## Citation + +If you use brainways, please cite [Kantor and Bartal (2023)](https://doi.org/10.1101/2023.05.25.542252): + + @article{kantor2023brainways, + title={Brainways: An Open-Source AI-based Software For Registration and Analysis of Fluorescent Markers on Coronal Brain Slices}, + author={Kantor, Ben and Ben-Ami Bartal, Inbal}, + journal={bioRxiv}, + pages={2023--05}, + year={2023}, + publisher={Cold Spring Harbor Laboratory} + } + +## License + +Distributed under the terms of the [GNU GPL v3.0] license, +""brainways"" is free and open source software + +## Issues + +If you encounter any problems, please [file an issue] along with a detailed description. + +[napari]: https://github.com/napari/napari +[Cookiecutter]: https://github.com/audreyr/cookiecutter +[@napari]: https://github.com/napari +[MIT]: http://opensource.org/licenses/MIT +[BSD-3]: http://opensource.org/licenses/BSD-3-Clause +[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt +[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt +[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0 +[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt +[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin + +[file an issue]: https://github.com/bkntr/brainways/issues + +[napari]: https://github.com/napari/napari +[tox]: https://tox.readthedocs.io/en/latest/ +[pip]: https://pypi.org/project/pip/ +[PyPI]: https://pypi.org/ +",text/markdown,https://github.com/bkntr/brainways,Ben Kantor,benkantor@mail.tau.ac.il,GPL-3.0,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Programming Language :: Python :: Implementation :: CPython', 'Topic :: Scientific/Engineering :: Image Processing']","['aicsimageio[base-imageio]==4.14.0', 'aicspylibczi', 'brainglobe-atlasapi', 'click', 'dacite', 'datasets', 'fsspec', 'huggingface-hub', 'importlib-resources', 'itk-elastix', 'kornia', 'napari[all]>=0.5.0', 'natsort', 'networkx', 'numpy<2.0.0', 'opencv-contrib-python-headless', 'opencv-python-headless', 'openpyxl', 'pandas', 'paquo', 'pingouin', 'qtpy', 'scikit-image', 'scikit-learn', 'scikit-posthocs', 'stardist', 'statsmodels', 'tensorflow', 'toml', 'torch', 'torchvision', 'lightning', 'tqdm', 'scyjava', 'pre-commit; extra == ""dev""', 'py; extra == ""testing""', 'pyqt5; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-mock; extra == ""testing""', 'pytest-qt<4.1.0; extra == ""testing""', 'tox; extra == ""testing""']",>=3.9,"['Bug Tracker, https://github.com/bkntr/brainways/issues', 'Documentation, https://github.com/bkntr/brainways#README.md', 'Source Code, https://github.com/bkntr/brainways', 'User Support, https://github.com/bkntr/brainways/issues']","['dev', 'testing']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,brainways.load_sample_project_annotated,Load Brainways sample annotated project,brainways.ui._sample_project:load_sample_project_annotated,brainways.make_qwidget,Make Brainways widget,brainways.ui.brainways_ui:BrainwaysUI,brainways.read_bwp,"Read "".bwp"" files",brainways.ui.napari_reader:get_reader,brainways.make_qwidget,Brainways,False,,,,,,,,,,,,,,,,,,,,brainways.load_sample_project,sample_project,Sample project,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,brainways.load_sample_project_annotated,sample_project_annotated,Annotated sample project,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +19,btrack,0.6.5,btrack,A framework for Bayesian multi-object tracking,,"MIT License Copyright (c) 2017 Alan R. Lowe (quantumjot) @@ -1915,8 +2072,8 @@ AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE. -","['Framework :: napari', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: C++', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Topic :: Scientific/Engineering :: Image Recognition', 'Topic :: Scientific/Engineering :: Visualization']","['cvxopt >=1.3.1', 'h5py >=2.10.0', 'numpy >=1.17.3', 'pandas >=2.0.3', 'pooch >=1.0.0', 'pydantic <2', 'scikit-image >=0.16.2', 'scipy >=1.3.1', 'tqdm >=4.65.0', ""black ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""ruff ; extra == 'dev'"", ""numpydoc ; extra == 'docs'"", ""pytz ; extra == 'docs'"", ""sphinx ; extra == 'docs'"", ""sphinx-automodapi ; extra == 'docs'"", ""sphinx-panels ; extra == 'docs'"", ""sphinx-rtd-theme ; extra == 'docs'"", ""magicgui >=0.5.0 ; extra == 'napari'"", ""napari-plugin-engine >=0.1.4 ; extra == 'napari'"", ""napari >=0.4.16 ; extra == 'napari'"", ""qtpy ; extra == 'napari'""]",>=3.9,"['bugtracker, https://github.com/quantumjot/btrack/issues', 'documentation, https://btrack.readthedocs.io', 'homepage, https://github.com/quantumjot/btrack', 'usersupport, https://github.com/quantumjot/btrack/discussions']","['dev', 'docs', 'napari']",False,0.4.4,conda-forge/btrack/0.4.4,0.4.5,conda-forge/btrack/0.4.5,0.4.6,conda-forge/btrack/0.4.6,conda,linux-64/btrack-0.4.2-py39hf939315_0.tar.bz2,0.0,MIT,True,,"['cvxopt >=1.2.0', 'h5py >=2.10.0', 'libgcc-ng >=10.3.0', 'libstdcxx-ng >=10.3.0', 'matplotlib-base >=3.1.1', 'numpy >=1.17.3', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'scikit-image >=0.16.2', 'scipy >=1.3.1']",py39hf939315_0,1648811168612.0,x86_64-any-linux,linux-64,2022-04-01 11:07:09.189000+00:00,5e01418e0c06b34deed7be2031838c11,None,239478.0,conda-forge/btrack/0.4.2/linux-64/btrack-0.4.2-py39hf939315_0.tar.bz2,//api.anaconda.org/download/conda-forge/btrack/0.4.2/linux-64/btrack-0.4.2-py39hf939315_0.tar.bz2,conda,0.4.2,conda-forge,['main'],conda,linux-64/btrack-0.4.2-py37h7cecad7_0.tar.bz2,0.0,MIT,True,,"['cvxopt >=1.2.0', 'h5py >=2.10.0', 'libgcc-ng >=10.3.0', 'libstdcxx-ng >=10.3.0', 'matplotlib-base >=3.1.1', 'numpy >=1.17.3', 'python >=3.7,<3.8.0a0', 'python_abi 3.7.* *_cp37m', 'scikit-image >=0.16.2', 'scipy >=1.3.1']",linux-64,1648811174796.0,x86_64-any-linux,py37h7cecad7_0,2022-04-01 11:07:09.515000+00:00,22e61b252c3821abaf05df94d06768a0,None,239003.0,conda-forge/btrack/0.4.2/linux-64/btrack-0.4.2-py37h7cecad7_0.tar.bz2,//api.anaconda.org/download/conda-forge/btrack/0.4.2/linux-64/btrack-0.4.2-py37h7cecad7_0.tar.bz2,conda,0.4.2,conda-forge,['main'],conda,osx-64/btrack-0.4.2-py38h8b7791e_0.tar.bz2,x86_64-any-darwin,True,osx-64,py38h8b7791e_0,0.0,"['cvxopt >=1.2.0', 'h5py >=2.10.0', 'libcxx >=12.0.1', 'matplotlib-base >=3.1.1', 'numpy >=1.17.3', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'scikit-image >=0.16.2', 'scipy >=1.3.1']",MIT,,1648811469139.0,2022-04-01 11:12:50.253000+00:00,b3106bcf8c93801a4467e83cadf5c83c,None,209298.0,conda-forge/btrack/0.4.2/osx-64/btrack-0.4.2-py38h8b7791e_0.tar.bz2,//api.anaconda.org/download/conda-forge/btrack/0.4.2/osx-64/btrack-0.4.2-py38h8b7791e_0.tar.bz2,conda,0.4.2,conda-forge,['main'],,btrack.write_hdf,Export Tracks to HDF,btrack.napari.writer:export_to_hdf,btrack.track,Create Track,btrack.napari.main:create_btrack_widget,,,,btrack.track,Track,False,,,,,,,,,,,,,btrack.write_hdf,['tracks'],,,,,,,,,,,,,,,conda,osx-64/btrack-0.4.2-py37h18621fa_0.tar.bz2,0.0,MIT,True,,"['cvxopt >=1.2.0', 'h5py >=2.10.0', 'libcxx >=12.0.1', 'matplotlib-base >=3.1.1', 'numpy >=1.17.3', 'python >=3.7,<3.8.0a0', 'python_abi 3.7.* *_cp37m', 'scikit-image >=0.16.2', 'scipy >=1.3.1']",osx-64,1648811509485.0,x86_64-any-darwin,py37h18621fa_0,2022-04-01 11:13:30.614000+00:00,6477571bf41fb37bbfe278330f7251e1,None,208960.0,conda-forge/btrack/0.4.2/osx-64/btrack-0.4.2-py37h18621fa_0.tar.bz2,//api.anaconda.org/download/conda-forge/btrack/0.4.2/osx-64/btrack-0.4.2-py37h18621fa_0.tar.bz2,conda,0.4.2,conda-forge,['main'],conda,osx-64/btrack-0.4.2-py39h7248d28_0.tar.bz2,0.0,MIT,True,,"['cvxopt >=1.2.0', 'h5py >=2.10.0', 'libcxx >=12.0.1', 'matplotlib-base >=3.1.1', 'numpy >=1.17.3', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'scikit-image >=0.16.2', 'scipy >=1.3.1']",osx-64,1648811567465.0,x86_64-any-darwin,py39h7248d28_0,2022-04-01 11:14:34.565000+00:00,02d1ed589607435e4939b8b4089bfa40,None,209204.0,conda-forge/btrack/0.4.2/osx-64/btrack-0.4.2-py39h7248d28_0.tar.bz2,//api.anaconda.org/download/conda-forge/btrack/0.4.2/osx-64/btrack-0.4.2-py39h7248d28_0.tar.bz2,conda,0.4.2,conda-forge,['main'],conda,linux-64/btrack-0.4.4-py39hf939315_0.tar.bz2,x86_64-any-linux,True,linux-64,py39hf939315_0,0.0,"['cvxopt >=1.2.0', 'h5py >=2.10.0', 'libgcc-ng >=12', 'libstdcxx-ng >=12', 'matplotlib-base >=3.1.1', 'numpy >=1.17.3', 'pooch >=1.0.0', 'pydantic >=1.9.0', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'scikit-image >=0.16.2', 'scipy >=1.3.1']",MIT,,1655168966170.0,2022-06-14 01:10:24.300000+00:00,396e9e0bcf4a705bb4b8216e07cfd3c7,None,257875.0,conda-forge/btrack/0.4.4/linux-64/btrack-0.4.4-py39hf939315_0.tar.bz2,//api.anaconda.org/download/conda-forge/btrack/0.4.4/linux-64/btrack-0.4.4-py39hf939315_0.tar.bz2,conda,0.4.4,conda-forge,['main'],,,,,,,,,,,conda,linux-64/btrack-0.4.4-py37h7cecad7_0.tar.bz2,0.0,MIT,True,,"['cvxopt >=1.2.0', 'h5py >=2.10.0', 'libgcc-ng >=12', 'libstdcxx-ng >=12', 'matplotlib-base >=3.1.1', 'numpy >=1.17.3', 'pooch >=1.0.0', 'pydantic >=1.9.0', 'python >=3.7,<3.8.0a0', 'python_abi 3.7.* *_cp37m', 'scikit-image >=0.16.2', 'scipy >=1.3.1']",linux-64,1655169004455.0,x86_64-any-linux,py37h7cecad7_0,2022-06-14 01:11:20.770000+00:00,d34067b4e84efffba19f252f52b757ef,None,257490.0,conda-forge/btrack/0.4.4/linux-64/btrack-0.4.4-py37h7cecad7_0.tar.bz2,//api.anaconda.org/download/conda-forge/btrack/0.4.4/linux-64/btrack-0.4.4-py37h7cecad7_0.tar.bz2,conda,0.4.4,conda-forge,['main'],conda,linux-64/btrack-0.4.4-py38h43d8883_0.tar.bz2,x86_64-any-linux,True,linux-64,py38h43d8883_0,0.0,"['cvxopt >=1.2.0', 'h5py >=2.10.0', 'libgcc-ng >=12', 'libstdcxx-ng >=12', 'matplotlib-base >=3.1.1', 'numpy >=1.17.3', 'pooch >=1.0.0', 'pydantic >=1.9.0', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'scikit-image >=0.16.2', 'scipy >=1.3.1']",MIT,,1655169025761.0,2022-06-14 01:11:37.696000+00:00,d7f3d643cdfc96901e4de31202dc4e5d,None,257881.0,conda-forge/btrack/0.4.4/linux-64/btrack-0.4.4-py38h43d8883_0.tar.bz2,//api.anaconda.org/download/conda-forge/btrack/0.4.4/linux-64/btrack-0.4.4-py38h43d8883_0.tar.bz2,conda,0.4.4,conda-forge,['main'],,,,,,,,,,,,,,,,,,,"['.h5', '.hdf', '.hdf5']",,,,,,,,,,,,,conda,osx-64/btrack-0.4.4-py39h7c694c3_0.tar.bz2,x86_64-any-darwin,True,osx-64,py39h7c694c3_0,0.0,"['cvxopt >=1.2.0', 'h5py >=2.10.0', 'libcxx >=13.0.1', 'matplotlib-base >=3.1.1', 'numpy >=1.17.3', 'pooch >=1.0.0', 'pydantic >=1.9.0', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'scikit-image >=0.16.2', 'scipy >=1.3.1']",MIT,,1655169115326.0,2022-06-14 01:13:38.593000+00:00,c608fcc9edf79aeb6af69f537d50a3ca,None,227516.0,conda-forge/btrack/0.4.4/osx-64/btrack-0.4.4-py39h7c694c3_0.tar.bz2,//api.anaconda.org/download/conda-forge/btrack/0.4.4/osx-64/btrack-0.4.4-py39h7c694c3_0.tar.bz2,conda,0.4.4,conda-forge,['main'],,,conda,osx-64/btrack-0.4.4-py38hf58141a_0.tar.bz2,x86_64-any-darwin,True,osx-64,py38hf58141a_0,0.0,"['cvxopt >=1.2.0', 'h5py >=2.10.0', 'libcxx >=13.0.1', 'matplotlib-base >=3.1.1', 'numpy >=1.17.3', 'pooch >=1.0.0', 'pydantic >=1.9.0', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'scikit-image >=0.16.2', 'scipy >=1.3.1']",MIT,1655169110625.0,2022-06-14 01:13:53.923000+00:00,a2a62c20bf75cf6cf1aaec2c47414273,None,227600.0,conda-forge/btrack/0.4.4/osx-64/btrack-0.4.4-py38hf58141a_0.tar.bz2,//api.anaconda.org/download/conda-forge/btrack/0.4.4/osx-64/btrack-0.4.4-py38hf58141a_0.tar.bz2,conda,0.4.4,conda-forge,['main'],conda,osx-64/btrack-0.4.4-py37h229a17a_0.tar.bz2,x86_64-any-darwin,True,osx-64,py37h229a17a_0,0.0,"['cvxopt >=1.2.0', 'h5py >=2.10.0', 'libcxx >=13.0.1', 'matplotlib-base >=3.1.1', 'numpy >=1.17.3', 'pooch >=1.0.0', 'pydantic >=1.9.0', 'python >=3.7,<3.8.0a0', 'python_abi 3.7.* *_cp37m', 'scikit-image >=0.16.2', 'scipy >=1.3.1']",MIT,1655169146139.0,2022-06-14 01:14:13.531000+00:00,23f7cfda64c353cf76b3e65b455f35b2,None,227261.0,conda-forge/btrack/0.4.4/osx-64/btrack-0.4.4-py37h229a17a_0.tar.bz2,//api.anaconda.org/download/conda-forge/btrack/0.4.4/osx-64/btrack-0.4.4-py37h229a17a_0.tar.bz2,conda,0.4.4,conda-forge,['main'],conda,linux-64/btrack-0.4.5-py39hf939315_0.tar.bz2,x86_64-any-linux,True,linux-64,py39hf939315_0,0.0,"['cvxopt >=1.2.0', 'h5py >=2.10.0', 'libgcc-ng >=12', 'libstdcxx-ng >=12', 'napari >=0.4.16', 'napari-plugin-engine', 'numpy >=1.17.3', 'pooch >=1.0.0', 'pydantic >=1.9.0', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'scikit-image >=0.16.2']",MIT,1657118684542.0,2022-07-06 14:46:45.738000+00:00,4b34dfc66793dc88cf573774c1ce818c,None,263365.0,conda-forge/btrack/0.4.5/linux-64/btrack-0.4.5-py39hf939315_0.tar.bz2,//api.anaconda.org/download/conda-forge/btrack/0.4.5/linux-64/btrack-0.4.5-py39hf939315_0.tar.bz2,conda,0.4.5,conda-forge,['main'],,, -18,cell-AAP,0.0.7,cell-AAP,,Anish Virdi,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.1.0,cell-AAP.run,Create GUI,cell_AAP.napari.main:create_cellAAP_widget,,,,2.1,cell-AAP,0.0.7,,,"# cellular-Automated Annotation Pipeline +","['Framework :: napari', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: C++', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Topic :: Scientific/Engineering :: Image Recognition', 'Topic :: Scientific/Engineering :: Visualization']","['cvxopt >=1.3.1', 'h5py >=2.10.0', 'numpy >=1.17.3', 'pandas >=2.0.3', 'pooch >=1.0.0', 'pydantic <2', 'scikit-image >=0.16.2', 'scipy >=1.3.1', 'tqdm >=4.65.0', ""black ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""ruff ; extra == 'dev'"", ""numpydoc ; extra == 'docs'"", ""pytz ; extra == 'docs'"", ""sphinx ; extra == 'docs'"", ""sphinx-automodapi ; extra == 'docs'"", ""sphinx-panels ; extra == 'docs'"", ""sphinx-rtd-theme ; extra == 'docs'"", ""magicgui >=0.5.0 ; extra == 'napari'"", ""napari-plugin-engine >=0.1.4 ; extra == 'napari'"", ""napari >=0.4.16 ; extra == 'napari'"", ""qtpy ; extra == 'napari'""]",>=3.9,"['bugtracker, https://github.com/quantumjot/btrack/issues', 'documentation, https://btrack.readthedocs.io', 'homepage, https://github.com/quantumjot/btrack', 'usersupport, https://github.com/quantumjot/btrack/discussions']","['dev', 'docs', 'napari']",False,0.4.4,conda-forge/btrack/0.4.4,0.4.5,conda-forge/btrack/0.4.5,0.4.6,conda-forge/btrack/0.4.6,conda,linux-64/btrack-0.4.2-py39hf939315_0.tar.bz2,0.0,MIT,True,,"['cvxopt >=1.2.0', 'h5py >=2.10.0', 'libgcc-ng >=10.3.0', 'libstdcxx-ng >=10.3.0', 'matplotlib-base >=3.1.1', 'numpy >=1.17.3', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'scikit-image >=0.16.2', 'scipy >=1.3.1']",py39hf939315_0,1648811168612.0,x86_64-any-linux,linux-64,2022-04-01 11:07:09.189000+00:00,5e01418e0c06b34deed7be2031838c11,None,239478.0,conda-forge/btrack/0.4.2/linux-64/btrack-0.4.2-py39hf939315_0.tar.bz2,//api.anaconda.org/download/conda-forge/btrack/0.4.2/linux-64/btrack-0.4.2-py39hf939315_0.tar.bz2,conda,0.4.2,conda-forge,['main'],conda,linux-64/btrack-0.4.2-py37h7cecad7_0.tar.bz2,0.0,MIT,True,,"['cvxopt >=1.2.0', 'h5py >=2.10.0', 'libgcc-ng >=10.3.0', 'libstdcxx-ng >=10.3.0', 'matplotlib-base >=3.1.1', 'numpy >=1.17.3', 'python >=3.7,<3.8.0a0', 'python_abi 3.7.* *_cp37m', 'scikit-image >=0.16.2', 'scipy >=1.3.1']",linux-64,1648811174796.0,x86_64-any-linux,py37h7cecad7_0,2022-04-01 11:07:09.515000+00:00,22e61b252c3821abaf05df94d06768a0,None,239003.0,conda-forge/btrack/0.4.2/linux-64/btrack-0.4.2-py37h7cecad7_0.tar.bz2,//api.anaconda.org/download/conda-forge/btrack/0.4.2/linux-64/btrack-0.4.2-py37h7cecad7_0.tar.bz2,conda,0.4.2,conda-forge,['main'],conda,osx-64/btrack-0.4.2-py38h8b7791e_0.tar.bz2,x86_64-any-darwin,True,osx-64,py38h8b7791e_0,0.0,"['cvxopt >=1.2.0', 'h5py >=2.10.0', 'libcxx >=12.0.1', 'matplotlib-base >=3.1.1', 'numpy >=1.17.3', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'scikit-image >=0.16.2', 'scipy >=1.3.1']",MIT,,1648811469139.0,2022-04-01 11:12:50.253000+00:00,b3106bcf8c93801a4467e83cadf5c83c,None,209298.0,conda-forge/btrack/0.4.2/osx-64/btrack-0.4.2-py38h8b7791e_0.tar.bz2,//api.anaconda.org/download/conda-forge/btrack/0.4.2/osx-64/btrack-0.4.2-py38h8b7791e_0.tar.bz2,conda,0.4.2,conda-forge,['main'],,btrack.write_hdf,Export Tracks to HDF,btrack.napari.writer:export_to_hdf,btrack.track,Create Track,btrack.napari.main:create_btrack_widget,,,,btrack.track,Track,False,,,,,,,,,,,,,btrack.write_hdf,['tracks'],,,,,,,,,,,,,,,conda,osx-64/btrack-0.4.2-py37h18621fa_0.tar.bz2,0.0,MIT,True,,"['cvxopt >=1.2.0', 'h5py >=2.10.0', 'libcxx >=12.0.1', 'matplotlib-base >=3.1.1', 'numpy >=1.17.3', 'python >=3.7,<3.8.0a0', 'python_abi 3.7.* *_cp37m', 'scikit-image >=0.16.2', 'scipy >=1.3.1']",osx-64,1648811509485.0,x86_64-any-darwin,py37h18621fa_0,2022-04-01 11:13:30.614000+00:00,6477571bf41fb37bbfe278330f7251e1,None,208960.0,conda-forge/btrack/0.4.2/osx-64/btrack-0.4.2-py37h18621fa_0.tar.bz2,//api.anaconda.org/download/conda-forge/btrack/0.4.2/osx-64/btrack-0.4.2-py37h18621fa_0.tar.bz2,conda,0.4.2,conda-forge,['main'],conda,osx-64/btrack-0.4.2-py39h7248d28_0.tar.bz2,0.0,MIT,True,,"['cvxopt >=1.2.0', 'h5py >=2.10.0', 'libcxx >=12.0.1', 'matplotlib-base >=3.1.1', 'numpy >=1.17.3', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'scikit-image >=0.16.2', 'scipy >=1.3.1']",osx-64,1648811567465.0,x86_64-any-darwin,py39h7248d28_0,2022-04-01 11:14:34.565000+00:00,02d1ed589607435e4939b8b4089bfa40,None,209204.0,conda-forge/btrack/0.4.2/osx-64/btrack-0.4.2-py39h7248d28_0.tar.bz2,//api.anaconda.org/download/conda-forge/btrack/0.4.2/osx-64/btrack-0.4.2-py39h7248d28_0.tar.bz2,conda,0.4.2,conda-forge,['main'],conda,linux-64/btrack-0.4.4-py39hf939315_0.tar.bz2,x86_64-any-linux,True,linux-64,py39hf939315_0,0.0,"['cvxopt >=1.2.0', 'h5py >=2.10.0', 'libgcc-ng >=12', 'libstdcxx-ng >=12', 'matplotlib-base >=3.1.1', 'numpy >=1.17.3', 'pooch >=1.0.0', 'pydantic >=1.9.0', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'scikit-image >=0.16.2', 'scipy >=1.3.1']",MIT,,1655168966170.0,2022-06-14 01:10:24.300000+00:00,396e9e0bcf4a705bb4b8216e07cfd3c7,None,257875.0,conda-forge/btrack/0.4.4/linux-64/btrack-0.4.4-py39hf939315_0.tar.bz2,//api.anaconda.org/download/conda-forge/btrack/0.4.4/linux-64/btrack-0.4.4-py39hf939315_0.tar.bz2,conda,0.4.4,conda-forge,['main'],,,,,,,,,,,conda,linux-64/btrack-0.4.4-py37h7cecad7_0.tar.bz2,0.0,MIT,True,,"['cvxopt >=1.2.0', 'h5py >=2.10.0', 'libgcc-ng >=12', 'libstdcxx-ng >=12', 'matplotlib-base >=3.1.1', 'numpy >=1.17.3', 'pooch >=1.0.0', 'pydantic >=1.9.0', 'python >=3.7,<3.8.0a0', 'python_abi 3.7.* *_cp37m', 'scikit-image >=0.16.2', 'scipy >=1.3.1']",linux-64,1655169004455.0,x86_64-any-linux,py37h7cecad7_0,2022-06-14 01:11:20.770000+00:00,d34067b4e84efffba19f252f52b757ef,None,257490.0,conda-forge/btrack/0.4.4/linux-64/btrack-0.4.4-py37h7cecad7_0.tar.bz2,//api.anaconda.org/download/conda-forge/btrack/0.4.4/linux-64/btrack-0.4.4-py37h7cecad7_0.tar.bz2,conda,0.4.4,conda-forge,['main'],conda,linux-64/btrack-0.4.4-py38h43d8883_0.tar.bz2,x86_64-any-linux,True,linux-64,py38h43d8883_0,0.0,"['cvxopt >=1.2.0', 'h5py >=2.10.0', 'libgcc-ng >=12', 'libstdcxx-ng >=12', 'matplotlib-base >=3.1.1', 'numpy >=1.17.3', 'pooch >=1.0.0', 'pydantic >=1.9.0', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'scikit-image >=0.16.2', 'scipy >=1.3.1']",MIT,,1655169025761.0,2022-06-14 01:11:37.696000+00:00,d7f3d643cdfc96901e4de31202dc4e5d,None,257881.0,conda-forge/btrack/0.4.4/linux-64/btrack-0.4.4-py38h43d8883_0.tar.bz2,//api.anaconda.org/download/conda-forge/btrack/0.4.4/linux-64/btrack-0.4.4-py38h43d8883_0.tar.bz2,conda,0.4.4,conda-forge,['main'],,,,,,,,,,,,,,,,"['.h5', '.hdf', '.hdf5']",,,,,,,,,,,,,conda,osx-64/btrack-0.4.4-py39h7c694c3_0.tar.bz2,x86_64-any-darwin,True,osx-64,py39h7c694c3_0,0.0,"['cvxopt >=1.2.0', 'h5py >=2.10.0', 'libcxx >=13.0.1', 'matplotlib-base >=3.1.1', 'numpy >=1.17.3', 'pooch >=1.0.0', 'pydantic >=1.9.0', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'scikit-image >=0.16.2', 'scipy >=1.3.1']",MIT,,1655169115326.0,2022-06-14 01:13:38.593000+00:00,c608fcc9edf79aeb6af69f537d50a3ca,None,227516.0,conda-forge/btrack/0.4.4/osx-64/btrack-0.4.4-py39h7c694c3_0.tar.bz2,//api.anaconda.org/download/conda-forge/btrack/0.4.4/osx-64/btrack-0.4.4-py39h7c694c3_0.tar.bz2,conda,0.4.4,conda-forge,['main'],conda,osx-64/btrack-0.4.4-py38hf58141a_0.tar.bz2,x86_64-any-darwin,True,osx-64,py38hf58141a_0,0.0,"['cvxopt >=1.2.0', 'h5py >=2.10.0', 'libcxx >=13.0.1', 'matplotlib-base >=3.1.1', 'numpy >=1.17.3', 'pooch >=1.0.0', 'pydantic >=1.9.0', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'scikit-image >=0.16.2', 'scipy >=1.3.1']",MIT,,1655169110625.0,2022-06-14 01:13:53.923000+00:00,a2a62c20bf75cf6cf1aaec2c47414273,None,227600.0,conda-forge/btrack/0.4.4/osx-64/btrack-0.4.4-py38hf58141a_0.tar.bz2,//api.anaconda.org/download/conda-forge/btrack/0.4.4/osx-64/btrack-0.4.4-py38hf58141a_0.tar.bz2,conda,0.4.4,conda-forge,['main'],,,conda,osx-64/btrack-0.4.4-py37h229a17a_0.tar.bz2,x86_64-any-darwin,True,osx-64,py37h229a17a_0,0.0,"['cvxopt >=1.2.0', 'h5py >=2.10.0', 'libcxx >=13.0.1', 'matplotlib-base >=3.1.1', 'numpy >=1.17.3', 'pooch >=1.0.0', 'pydantic >=1.9.0', 'python >=3.7,<3.8.0a0', 'python_abi 3.7.* *_cp37m', 'scikit-image >=0.16.2', 'scipy >=1.3.1']",MIT,1655169146139.0,2022-06-14 01:14:13.531000+00:00,23f7cfda64c353cf76b3e65b455f35b2,None,227261.0,conda-forge/btrack/0.4.4/osx-64/btrack-0.4.4-py37h229a17a_0.tar.bz2,//api.anaconda.org/download/conda-forge/btrack/0.4.4/osx-64/btrack-0.4.4-py37h229a17a_0.tar.bz2,conda,0.4.4,conda-forge,['main'],,,conda,linux-64/btrack-0.4.5-py39hf939315_0.tar.bz2,x86_64-any-linux,True,linux-64,py39hf939315_0,0.0,"['cvxopt >=1.2.0', 'h5py >=2.10.0', 'libgcc-ng >=12', 'libstdcxx-ng >=12', 'napari >=0.4.16', 'napari-plugin-engine', 'numpy >=1.17.3', 'pooch >=1.0.0', 'pydantic >=1.9.0', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'scikit-image >=0.16.2']",MIT,1657118684542.0,2022-07-06 14:46:45.738000+00:00,4b34dfc66793dc88cf573774c1ce818c,None,263365.0,conda-forge/btrack/0.4.5/linux-64/btrack-0.4.5-py39hf939315_0.tar.bz2,//api.anaconda.org/download/conda-forge/btrack/0.4.5/linux-64/btrack-0.4.5-py39hf939315_0.tar.bz2,conda,0.4.5,conda-forge,['main'],conda,linux-64/btrack-0.4.5-py38h43d8883_0.tar.bz2,x86_64-any-linux,True,linux-64,py38h43d8883_0,0.0,"['cvxopt >=1.2.0', 'h5py >=2.10.0', 'libgcc-ng >=12', 'libstdcxx-ng >=12', 'napari >=0.4.16', 'napari-plugin-engine', 'numpy >=1.17.3', 'pooch >=1.0.0', 'pydantic >=1.9.0', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'scikit-image >=0.16.2']",MIT,2022-07-06 14:46:57.897000+00:00,b1e5722c4358aa2b49c67698f4aa5fe6,None,263435.0,conda-forge/btrack/0.4.5/linux-64/btrack-0.4.5-py38h43d8883_0.tar.bz2,//api.anaconda.org/download/conda-forge/btrack/0.4.5/linux-64/btrack-0.4.5-py38h43d8883_0.tar.bz2,conda,0.4.5,conda-forge,['main'],,, +20,cell-AAP,0.0.8,cell-AAP,,Anish Virdi,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.1.0,cell-AAP.run,Inference GUI,cell_AAP.napari.main:create_cellAAP_widget,,,,2.1,cell-AAP,0.0.8,,,"# cellular-Automated Annotation Pipeline Utilities for the semi-automated generation of instance segmentation annotations to be used for neural network training. Utilities are built ontop of [UMAP](https://github.com/lmcinnes/umap), [HDBSCAN](https://arxiv.org/abs/1911.02282) and a finetuned encoder version of FAIR's [Segment Anything Model](https://github.com/facebookresearch/segment-anything/tree/main?tab=readme-ov-file) developed by Computational Cell Analytics for the project [micro-sam](https://github.com/computational-cell-analytics/micro-sam/tree/master/micro_sam/sam_annotator). In addition to providing utilies for annotation building, we train a network, FAIR's [detectron2](https://github.com/facebookresearch/detectron2) to 1. Demonstrate the efficacy of our utilities. 2. Be used for microscopy annotation of supported cell lines @@ -2002,13 +2159,13 @@ Note: Interclass double predictions are often early prophase cells that the netw -",text/markdown,,Anish Virdi,,,"['Framework :: napari', 'Programming Language :: Python :: 3']","['napari[all] >=0.4.19', 'numpy >=1.26.4', 'opencv-python >=4.9.0', 'tifffile >=2024.2.12', 'torch >=2.3.0', 'torchvision >=0.18.0', 'scikit-image >=0.22.0', 'qtpy >=2.4.1', 'pillow >=10.3.0', 'scipy >=1.3.0', 'timm >=1.0.7']",>=3.8,,,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,cell-AAP.run,cell-AAP,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -19,cellcanvas,0.0.1,cellcanvas,A tool for painting in cellular architecture,Kyle Harrington,MIT,https://github.com/cellcanvas/cellcanvas,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,,,,,,,2.1,cellcanvas,0.0.1,,A tool for painting in cellular architecture,"# cellcanvas +",text/markdown,,Anish Virdi,,,"['Framework :: napari', 'Programming Language :: Python :: 3']","['napari[all]>=0.4.19', 'numpy==1.26.4', 'opencv-python>=4.9.0', 'tifffile>=2024.2.12', 'torch>=2.3.1', 'torchvision>=0.18.1', 'scikit-image>=0.22.0', 'qtpy>=2.4.1', 'pillow>=10.3.0', 'scipy>=1.3.0', 'timm>=1.0.7', 'pandas>=2.2.2', 'superqt>=0.6.3', 'btrack>=0.6.5', 'seaborn>=0.13.2', 'openpyxl>=3.1.4', 'joblib>=1.0', 'scikit-learn>=0.22', 'cython<3,>=0.27']","<3.13,>=3.11",,,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,cell-AAP.batch,Batch Inference GUI,cell_AAP.napari.main:create_batch_widget,,,,,,,cell-AAP.run,Inference GUI,False,cell-AAP.batch,Batch Inference GUI,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +21,cellcanvas,0.0.1,cellcanvas,A tool for painting in cellular architecture,Kyle Harrington,MIT,https://github.com/cellcanvas/cellcanvas,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,,,,,,,2.1,cellcanvas,0.0.1,,A tool for painting in cellular architecture,"# cellcanvas A tool to support painting in cellular architecture ![cellcanvas_screenshot](cover.png) -",text/markdown,https://github.com/cellcanvas/cellcanvas,Kyle Harrington,czii@kyleharrington.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy <2.0.0', 'magicgui >=0.8.1', 'mrcfile', 'qtpy >=2.4.1', 'scikit-image >=0.22.0', 'toolz >=0.12.0', 'scikit-learn >=1.3.2', 'pyclesperanto-prototype', 'pymeshfix', 'psygnal >=0.9.5', 'superqt >=0.6.1', 'surforama', 'starfile', 'zarr >=2.16.1', 'xgboost >=2', 'matplotlib >=3.8.2', ""tox ; extra == 'dev'"", ""pytest ; extra == 'dev'"", ""pytest-cov ; extra == 'dev'"", ""pytest-qt ; extra == 'dev'"", ""napari ; extra == 'dev'"", ""pyqt5 ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/cellcanvas/cellcanvas/issues', 'Documentation, https://github.com/cellcanvas/cellcanvas#README.md', 'Source Code, https://github.com/cellcanvas/cellcanvas', 'User Support, https://github.com/cellcanvas/cellcanvas/issues']","['dev', 'testing']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation']",,,,,,,,,,cellcanvas.make_qwidget,Example QWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -20,cellfinder,1.3.2,cellfinder,Automated 3D cell detection in large microscopy images,,BSD-3-Clause,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.1.0,cellfinder.napari.detect_widget,Create Cell detection,cellfinder.napari.detect:detect_widget,,,,2.1,cellfinder,1.3.2,,Automated 3D cell detection in large microscopy images,"[![Python Version](https://img.shields.io/pypi/pyversions/cellfinder.svg)](https://pypi.org/project/cellfinder) +",text/markdown,https://github.com/cellcanvas/cellcanvas,Kyle Harrington,czii@kyleharrington.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy <2.0.0', 'magicgui >=0.8.1', 'mrcfile', 'qtpy >=2.4.1', 'scikit-image >=0.22.0', 'toolz >=0.12.0', 'scikit-learn >=1.3.2', 'pyclesperanto-prototype', 'pymeshfix', 'psygnal >=0.9.5', 'superqt >=0.6.1', 'surforama', 'starfile', 'zarr >=2.16.1', 'xgboost >=2', 'matplotlib >=3.8.2', ""tox ; extra == 'dev'"", ""pytest ; extra == 'dev'"", ""pytest-cov ; extra == 'dev'"", ""pytest-qt ; extra == 'dev'"", ""napari ; extra == 'dev'"", ""pyqt5 ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/cellcanvas/cellcanvas/issues', 'Documentation, https://github.com/cellcanvas/cellcanvas#README.md', 'Source Code, https://github.com/cellcanvas/cellcanvas', 'User Support, https://github.com/cellcanvas/cellcanvas/issues']","['dev', 'testing']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation']",,,,,,,,,,cellcanvas.make_qwidget,Example QWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +22,cellfinder,1.3.3,cellfinder,Automated 3D cell detection in large microscopy images,,BSD-3-Clause,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.1.0,cellfinder.napari.detect_widget,Create Cell detection,cellfinder.napari.detect:detect_widget,,,,2.1,cellfinder,1.3.3,,Automated 3D cell detection in large microscopy images,"[![Python Version](https://img.shields.io/pypi/pyversions/cellfinder.svg)](https://pypi.org/project/cellfinder) [![PyPI](https://img.shields.io/pypi/v/cellfinder.svg)](https://pypi.org/project/cellfinder) [![Downloads](https://pepy.tech/badge/cellfinder)](https://pepy.tech/project/cellfinder) [![Wheel](https://img.shields.io/pypi/wheel/cellfinder.svg)](https://pypi.org/project/cellfinder) @@ -2065,8 +2222,186 @@ If you find this package useful, and use it in your research, please cite the fo **If you use this, or any other tools in the brainglobe suite, please [let us know](https://brainglobe.info/contact.html), and we'd be happy to promote your paper/talk etc.** -",text/markdown,,,"""Adam Tyson, Christian Niedworok, Charly Rousseau"" ",BSD-3-Clause,"['Development Status :: 4 - Beta', 'Framework :: napari', 'Intended Audience :: Developers', 'Intended Audience :: Science/Research', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Recognition']","['brainglobe-utils>=0.5.0', 'brainglobe-napari-io>=0.3.4', 'dask[array]', 'fancylog>=0.0.7', 'natsort', 'numba', 'numpy<2', 'scikit-image', 'scikit-learn', 'keras>=3.0.0', 'torch>=2.1.0', 'tifffile', 'tqdm', 'black; extra == ""dev""', 'pre-commit; extra == ""dev""', 'pyinstrument; extra == ""dev""', 'pytest-cov; extra == ""dev""', 'pytest-mock; extra == ""dev""', 'pytest-qt; extra == ""dev""', 'pytest-timeout; extra == ""dev""', 'pytest; extra == ""dev""', 'tox; extra == ""dev""', 'brainglobe-napari-io; extra == ""napari""', 'magicgui; extra == ""napari""', 'napari-ndtiffs; extra == ""napari""', 'napari-plugin-engine>=0.1.4; extra == ""napari""', 'napari[pyqt5]; extra == ""napari""', 'pooch>=1; extra == ""napari""', 'qtpy; extra == ""napari""']",>=3.10,"['Homepage, https://brainglobe.info/documentation/cellfinder/index.html', 'Source Code, https://github.com/brainglobe/cellfinder', 'Bug Tracker, https://github.com/brainglobe/cellfinder/issues', 'Documentation, https://brainglobe.info/documentation/cellfinder/index.html', 'User Support, https://forum.image.sc/tag/brainglobe']","['dev', 'napari']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,cellfinder.napari.training_widget,Create Train network,cellfinder.napari.train:training_widget,cellfinder.napari.CurationWidget,Create Curation,cellfinder.napari.curation:CurationWidget,cellfinder.napari.SampleData,Sample data,cellfinder.napari.sample_data:load_sample,cellfinder.napari.detect_widget,Cell detection,False,cellfinder.napari.training_widget,Train network,False,cellfinder.napari.CurationWidget,Curation,False,,,,,,,,,,,,,,cellfinder.napari.SampleData,sample,Sample data,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -21,cellpose-napari,0.2.0,cellpose-napari,a generalist algorithm for anatomical segmentation,Carsen Stringer,BSD-3,https://github.com/Mouseland/cellpose-napari,620a3096414b5ba20e173296,['conda'],,https://github.com/Mouseland/cellpose-napari,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/cellpose-napari,http://api.anaconda.org/packages/conda-forge/cellpose-napari,http://anaconda.org/conda-forge/cellpose-napari,"['0.1.4', '0.1.5', '0.2.0']",0.2.0,0.2.0,['noarch'],9.0,,['pyhd8ed1ab_0'],0.1.4,conda-forge/cellpose-napari/0.1.4,1.0,0.0,2022-02-14 10:36:04.400000+00:00,2024-09-05 11:27:38.930000+00:00,conda,noarch/cellpose-napari-0.1.4-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['cellpose >0.6.3', 'imagecodecs', 'napari', 'napari-plugin-engine >=0.1.4', 'python >=3.6']",noarch,1644834700267.0,None-any-None,pyhd8ed1ab_0,2022-02-14 10:36:04.855000+00:00,10188b526544942ce15915713544f503,None,14365.0,conda-forge/cellpose-napari/0.1.4/noarch/cellpose-napari-0.1.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/cellpose-napari/0.1.4/noarch/cellpose-napari-0.1.4-pyhd8ed1ab_0.tar.bz2,conda,0.1.4,conda-forge,['main'],public,,0.1.0,cellpose-napari.widget_wrapper,Create cellpose,cellpose_napari._dock_widget:widget_wrapper,,,,2.1,cellpose-napari,0.2.0,,a generalist algorithm for anatomical segmentation,"# cellpose-napari +",text/markdown,,,"""Adam Tyson, Christian Niedworok, Charly Rousseau"" ",BSD-3-Clause,"['Development Status :: 4 - Beta', 'Framework :: napari', 'Intended Audience :: Developers', 'Intended Audience :: Science/Research', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Recognition']","['brainglobe-utils>=0.5.0', 'brainglobe-napari-io>=0.3.4', 'dask[array]', 'fancylog>=0.0.7', 'natsort', 'numba', 'numpy', 'scikit-image', 'scikit-learn', 'keras==3.5.0', 'torch>=2.1.0', 'tifffile', 'tqdm', 'black; extra == ""dev""', 'pre-commit; extra == ""dev""', 'pyinstrument; extra == ""dev""', 'pytest-cov; extra == ""dev""', 'pytest-mock; extra == ""dev""', 'pytest-qt; extra == ""dev""', 'pytest-timeout; extra == ""dev""', 'pytest; extra == ""dev""', 'tox; extra == ""dev""', 'brainglobe-napari-io; extra == ""napari""', 'magicgui; extra == ""napari""', 'napari-ndtiffs; extra == ""napari""', 'napari-plugin-engine>=0.1.4; extra == ""napari""', 'napari[pyqt5]; extra == ""napari""', 'pooch>=1; extra == ""napari""', 'qtpy; extra == ""napari""']",>=3.10,"['Homepage, https://brainglobe.info/documentation/cellfinder/index.html', 'Source Code, https://github.com/brainglobe/cellfinder', 'Bug Tracker, https://github.com/brainglobe/cellfinder/issues', 'Documentation, https://brainglobe.info/documentation/cellfinder/index.html', 'User Support, https://forum.image.sc/tag/brainglobe']","['dev', 'napari']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,cellfinder.napari.training_widget,Create Train network,cellfinder.napari.train:training_widget,cellfinder.napari.CurationWidget,Create Curation,cellfinder.napari.curation:CurationWidget,cellfinder.napari.SampleData,Sample data,cellfinder.napari.sample_data:load_sample,cellfinder.napari.detect_widget,Cell detection,False,cellfinder.napari.training_widget,Train network,False,cellfinder.napari.CurationWidget,Curation,False,,,,,,,,,,,,,,cellfinder.napari.SampleData,sample,Sample data,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +23,cellpose-counter,0.1.3,CellPose Counter,Cell/nuclei counter using cellpose models,Nicolas Buitrago," +Copyright (c) 2024, Szablowski Lab +All rights reserved. + +Redistribution and use in source and binary forms, with or without +modification, are permitted provided that the following conditions are met: + +* Redistributions of source code must retain the above copyright notice, this + list of conditions and the following disclaimer. + +* Redistributions in binary form must reproduce the above copyright notice, + this list of conditions and the following disclaimer in the documentation + and/or other materials provided with the distribution. + +* Neither the name of copyright holder nor the names of its + contributors may be used to endorse or promote products derived from + this software without specific prior written permission. + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ""AS IS"" +AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE +IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE +DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE +FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL +DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR +SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER +CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, +OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE +OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. +",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,cellpose-counter.make_counter_widget,Make Counter widget,cellpose_counter:Counter,,,,2.1,cellpose-counter,0.1.3,,Cell/nuclei counter using cellpose models,"# cellpose-counter + +[![License BSD-3](https://img.shields.io/pypi/l/cellpose-counter.svg?color=green)](https://github.com/szablowskilab/cellpose-counter/raw/main/LICENSE) +[![PyPI](https://img.shields.io/pypi/v/cellpose-counter.svg?color=green)](https://pypi.org/project/cellpose-counter) +[![Python Version](https://img.shields.io/pypi/pyversions/cellpose-counter.svg?color=green)](https://python.org) +[![tests](https://github.com/szablowskilab/cellpose-counter/workflows/tests/badge.svg)](https://github.com/szablowskilab/cellpose-counter/actions) +[![codecov](https://codecov.io/gh/szablowskilab/cellpose-counter/branch/main/graph/badge.svg)](https://codecov.io/gh/szablowskilab/cellpose-counter) +[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/cellpose-counter)](https://napari-hub.org/plugins/cellpose-counter) + +A Napari plugin for cell/nuclei counting from a region or interest using +cellpose models. + +---------------------------------- + +## Installation + +Option 1: Install in Napari directly under the plugins tab and select +cellpose-counter. + +Option 2: via [pip](https://pip.pypa.io/en/stable/) (or pip alternatives like +[uv](https://docs.astral.sh/uv/)): + +Below is a minimally working example of setting up a new virtual environment and +installing the counter module with uv on Unix based systems. + +```bash +uv venv # create virtual environment in .venv +source .venv/bin/activate + +uv pip install ""napari[all]"" cellpose-counter +``` + +## GPU Acceleration + +To enable GPU acceleration, you will need a CUDA capable GPU along with the +[CUDA toolkit](https://developer.nvidia.com/cuda-toolkit) and [cudNN library](https://developer.nvidia.com/cudnn). + +For instructions on installing cuda toolkit and cudNN, see: + +1. [cuda toolkit installation for Linux](https://docs.nvidia.com/cuda/cuda-installation-guide-linux/index.html#fedora) +1. [cudNN installation for Linux](https://docs.nvidia.com/deeplearning/cudnn/latest/installation/linux.html) + +Once these are installed, update the pytorch package by first uninstalling torch +(if already instsalled). + +```bash +uv pip uninstall torch +``` + +Then install a torch version that is compatible with your CUDA version. For example, + +```bash +uv pip install torch --index-url https://download.pytorch.org/whl/cu118 +``` + +After installation, you can verify in an interactive python console with: + +```python3 +import torch +torch.cuda.is_available() +``` + +## Usage + +To open Napari with the cellpose counter loaded, run `napari -w cellpose-counter`. + +A dock widget will be open on the right side of the Napari interface. There +you can view options for restoring images (using the cellpose denoise module), +and counting cells/nuclei in a region of interest (ROI). + +A few important notes: + +1. Images in TIFF or CZI file formats may be used. +1. Images must be grayscale or single channel. RGB images may be loaded, but +should be split. You can do this by right clicking on the image and select +`split rgb` or `split stack`. +1. ROIs can be drawn using the shape layer tools. Only a single ROI can be drawn +per shape layer (otherwise only the first draw ROI will be used). +1. ROIs should be square or rectangular. You can draw ROIs as polygons or other +shapes, but a bounding box will be made from these shapes anyway. +1. For long running processes such as image restoration or counting, it may seem +like Napari is not doing anything. Notifications are shown in the viewer to +display import information and a small activity indicator can be seen in the +bottom right hand corner. If this indicator is spinning, then work is being done +even if it doesn't look like it. + +## Updating + +1. via Napari plugin manager. Select cellpose-counter plugin and update button. + +1. via pip (or uv, ..., etc.) + +```bash +uv pip install cellpose-counter --upgrade +``` + +## Contributing + +All contributions are welcome. Please submit an issue for feedback or bugs. + +## Citations + +This plugin is built on top of the Cellpose segmentation and denoising models. +If you use this plugin, please cite the following paper: + +```bitex +@article{stringer2021cellpose, +title={Cellpose: a generalist algorithm for cellular segmentation}, +author={Stringer, Carsen and Wang, Tim and Michaelos, Michalis and Pachitariu, Marius}, +journal={Nature Methods}, +volume={18}, +number={1}, +pages={100--106}, +year={2021}, +publisher={Nature Publishing Group} +} +``` + +## License + +[BSD-3](./LICENSE) +",text/markdown,,Nicolas Buitrago,nsb5@rice.edu," +Copyright (c) 2024, Szablowski Lab +All rights reserved. + +Redistribution and use in source and binary forms, with or without +modification, are permitted provided that the following conditions are met: + +* Redistributions of source code must retain the above copyright notice, this + list of conditions and the following disclaimer. + +* Redistributions in binary form must reproduce the above copyright notice, + this list of conditions and the following disclaimer in the documentation + and/or other materials provided with the distribution. + +* Neither the name of copyright holder nor the names of its + contributors may be used to endorse or promote products derived from + this software without specific prior written permission. + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ""AS IS"" +AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE +IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE +DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE +FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL +DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR +SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER +CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, +OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE +OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. +","['Development Status :: 3 - Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', 'napari[all]>=0.5.4', 'cellpose>=3.1.0', 'accelerate>=1.1.1', 'napari-czifile2>=0.2.7', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.10,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation']",,,,,,,,,,cellpose-counter.make_counter_widget,Counter,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +24,cellpose-napari,0.2.0,cellpose-napari,a generalist algorithm for anatomical segmentation,Carsen Stringer,BSD-3,https://github.com/Mouseland/cellpose-napari,620a3096414b5ba20e173296,['conda'],,https://github.com/Mouseland/cellpose-napari,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/cellpose-napari,http://api.anaconda.org/packages/conda-forge/cellpose-napari,http://anaconda.org/conda-forge/cellpose-napari,"['0.1.4', '0.1.5', '0.2.0']",0.2.0,0.2.0,['noarch'],9.0,,['pyhd8ed1ab_0'],0.1.4,conda-forge/cellpose-napari/0.1.4,1.0,0.0,2022-02-14 10:36:04.400000+00:00,2024-09-05 11:27:38.930000+00:00,conda,noarch/cellpose-napari-0.1.4-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['cellpose >0.6.3', 'imagecodecs', 'napari', 'napari-plugin-engine >=0.1.4', 'python >=3.6']",noarch,1644834700267.0,None-any-None,pyhd8ed1ab_0,2022-02-14 10:36:04.855000+00:00,10188b526544942ce15915713544f503,None,14365.0,conda-forge/cellpose-napari/0.1.4/noarch/cellpose-napari-0.1.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/cellpose-napari/0.1.4/noarch/cellpose-napari-0.1.4-pyhd8ed1ab_0.tar.bz2,conda,0.1.4,conda-forge,['main'],public,,0.1.0,cellpose-napari.widget_wrapper,Create cellpose,cellpose_napari._dock_widget:widget_wrapper,,,,2.1,cellpose-napari,0.2.0,,a generalist algorithm for anatomical segmentation,"# cellpose-napari [![Documentation Status](https://readthedocs.org/projects/cellpose-napari/badge/?version=latest)](https://cellpose-napari.readthedocs.io/en/latest/?badge=latest) [![tests](https://github.com/mouseland/cellpose-napari/workflows/tests/badge.svg)](https://github.com/mouseland/cellpose-napari/actions) @@ -2205,8 +2540,201 @@ cellpose relies on the following excellent packages (which are automatically ins [@napari]: https://github.com/napari [BSD-3]: http://opensource.org/licenses/BSD-3-Clause [cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin -",text/markdown,https://github.com/Mouseland/cellpose-napari,Carsen Stringer,stringerc@janelia.hhmi.org,BSD-3,"['Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License', 'Framework :: napari']","['napari', 'napari-plugin-engine>=0.1.4', 'cellpose>0.6.3', 'imagecodecs', 'sphinx>=3.0; extra == ""docs""', 'sphinxcontrib-apidoc; extra == ""docs""', 'sphinx-rtd-theme; extra == ""docs""', 'sphinx-prompt; extra == ""docs""', 'sphinx-autodoc-typehints; extra == ""docs""', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.7,,"['docs', 'testing']",False,0.1.5,conda-forge/cellpose-napari/0.1.5,0.2.0,conda-forge/cellpose-napari/0.2.0,,,conda,noarch/cellpose-napari-0.1.5-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['cellpose >0.6.3', 'imagecodecs', 'napari', 'napari-plugin-engine >=0.1.4', 'python >=3.6']",pyhd8ed1ab_0,1654699306505.0,None-any-None,noarch,2022-06-08 14:45:59.175000+00:00,e4f601d8f089a541cb91e735b3c84c4e,None,14703.0,conda-forge/cellpose-napari/0.1.5/noarch/cellpose-napari-0.1.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/cellpose-napari/0.1.5/noarch/cellpose-napari-0.1.5-pyhd8ed1ab_0.tar.bz2,conda,0.1.5,conda-forge,['main'],conda,noarch/cellpose-napari-0.2.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['cellpose >0.6.3', 'imagecodecs', 'napari', 'napari-plugin-engine >=0.1.4', 'python >=3.6']",noarch,1725535510496.0,None-any-None,pyhd8ed1ab_0,2024-09-05 11:27:32.294000+00:00,3819bf592ba396b3d9b60eb481232c93,1649a6e19ebfcdb26267dcde555f8a560f177fa4bd1974939da48517c61489c0,16755.0,conda-forge/cellpose-napari/0.2.0/noarch/cellpose-napari-0.2.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/cellpose-napari/0.2.0/noarch/cellpose-napari-0.2.0-pyhd8ed1ab_0.conda,conda,0.2.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,cellpose-napari.data.rgb_3D,Generate RGB 3D sample,cellpose_napari._sample_data:rgb_3D.tif,cellpose-napari.data.rgb_2D,Generate RGB 2D sample,cellpose_napari._sample_data:rgb_2D.png,,,,cellpose-napari.widget_wrapper,cellpose,False,,,,,,,,,,,,,,,,,,,,cellpose-napari.data.rgb_3D,rgb_3D,Cells (3D+2Ch),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,cellpose-napari.data.rgb_2D,rgb_2D,Cells 2D,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -22,cryaleconcho,0.0.7,cryaleconcho,Napari plugin of algorithms for Panoptic Segmentation of organelles in EM,Ryan Conrad,BSD-3-Clause,https://github.com/volume-em/empanada-napari,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.1.0,cryaleconcho.test_widget,Create 2D Inference (Parameter Testing),empanada_napari._slice_inference:test_widget,,,,2.1,cryaleconcho,0.0.7,,Napari plugin of algorithms for Panoptic Segmentation of organelles in EM,"# empanada-napari +",text/markdown,https://github.com/Mouseland/cellpose-napari,Carsen Stringer,stringerc@janelia.hhmi.org,BSD-3,"['Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License', 'Framework :: napari']","['napari', 'napari-plugin-engine>=0.1.4', 'cellpose>0.6.3', 'imagecodecs', 'sphinx>=3.0; extra == ""docs""', 'sphinxcontrib-apidoc; extra == ""docs""', 'sphinx-rtd-theme; extra == ""docs""', 'sphinx-prompt; extra == ""docs""', 'sphinx-autodoc-typehints; extra == ""docs""', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.7,,"['docs', 'testing']",False,0.1.5,conda-forge/cellpose-napari/0.1.5,0.2.0,conda-forge/cellpose-napari/0.2.0,,,conda,noarch/cellpose-napari-0.1.5-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['cellpose >0.6.3', 'imagecodecs', 'napari', 'napari-plugin-engine >=0.1.4', 'python >=3.6']",pyhd8ed1ab_0,1654699306505.0,None-any-None,noarch,2022-06-08 14:45:59.175000+00:00,e4f601d8f089a541cb91e735b3c84c4e,None,14703.0,conda-forge/cellpose-napari/0.1.5/noarch/cellpose-napari-0.1.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/cellpose-napari/0.1.5/noarch/cellpose-napari-0.1.5-pyhd8ed1ab_0.tar.bz2,conda,0.1.5,conda-forge,['main'],conda,noarch/cellpose-napari-0.2.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['cellpose >0.6.3', 'imagecodecs', 'napari', 'napari-plugin-engine >=0.1.4', 'python >=3.6']",noarch,1725535510496.0,None-any-None,pyhd8ed1ab_0,2024-09-05 11:27:32.294000+00:00,3819bf592ba396b3d9b60eb481232c93,1649a6e19ebfcdb26267dcde555f8a560f177fa4bd1974939da48517c61489c0,16755.0,conda-forge/cellpose-napari/0.2.0/noarch/cellpose-napari-0.2.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/cellpose-napari/0.2.0/noarch/cellpose-napari-0.2.0-pyhd8ed1ab_0.conda,conda,0.2.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,cellpose-napari.data.rgb_3D,Generate RGB 3D sample,cellpose_napari._sample_data:rgb_3D.tif,cellpose-napari.data.rgb_2D,Generate RGB 2D sample,cellpose_napari._sample_data:rgb_2D.png,,,,cellpose-napari.widget_wrapper,cellpose,False,,,,,,,,,,,,,,,,,,,,cellpose-napari.data.rgb_3D,rgb_3D,Cells (3D+2Ch),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,cellpose-napari.data.rgb_2D,rgb_2D,Cells 2D,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +25,cochlea-synapseg,0.0.1,Cochlea SynapSeg,"A plugin to segment cochlear ribbon synapses automatically, as well as edit and adjust",Cayla Miller," +Copyright (c) 2024, Cayla Miller +All rights reserved. + +Redistribution and use in source and binary forms, with or without +modification, are permitted provided that the following conditions are met: + +* Redistributions of source code must retain the above copyright notice, this + list of conditions and the following disclaimer. + +* Redistributions in binary form must reproduce the above copyright notice, + this list of conditions and the following disclaimer in the documentation + and/or other materials provided with the distribution. + +* Neither the name of copyright holder nor the names of its + contributors may be used to endorse or promote products derived from + this software without specific prior written permission. + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ""AS IS"" +AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE +IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE +DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE +FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL +DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR +SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER +CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, +OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE +OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. +",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,cochlea-synapseg.get_reader,Open data with Cochlea SynapSeg,napari_cochlea_synapse_seg._reader:napari_get_reader,cochlea-synapseg.get_reader,"['*.zarr', '*.xml', '*.csv', '*.xls', '*.XLS']",True,2.1,cochlea-synapseg,0.0.1,,"A plugin to segment cochlear ribbon synapses automatically, as well as edit and adjust","# cochlea-synapseg + +[![License BSD-3](https://img.shields.io/pypi/l/cochlea-synapseg.svg?color=green)](https://github.com/ucsdmanorlab/cochlea-synapseg/raw/main/LICENSE) +[![PyPI](https://img.shields.io/pypi/v/cochlea-synapseg.svg?color=green)](https://pypi.org/project/cochlea-synapseg) +[![Python Version](https://img.shields.io/pypi/pyversions/cochlea-synapseg.svg?color=green)](https://python.org) +[![tests](https://github.com/ucsdmanorlab/cochlea-synapseg/workflows/tests/badge.svg)](https://github.com/ucsdmanorlab/cochlea-synapseg/actions) +[![codecov](https://codecov.io/gh/ucsdmanorlab/cochlea-synapseg/branch/main/graph/badge.svg)](https://codecov.io/gh/ucsdmanorlab/cochlea-synapseg) +[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/cochlea-synapseg)](https://napari-hub.org/plugins/cochlea-synapseg) + +A plugin to segment cochlear ribbon synapses. + +More is in the works, but for now it includes tools to more quickly generate ground truth ribbon segmentation (Plugins > SynapSeg - Ground Truth Widget). + +---------------------------------- + +This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template. + + + +## Installation + +You can install `cochlea-synapseg` (receommended: in a new conda environment with up-to-date napari) via [pip]: + + python -m pip install cochlea-synapseg + +## Usage + +After successfull installation, you can find the plugin next time you launch napari (Plugins > SynapSeg - Ground Truth Widget). + +The ground truth widget is divided into multiple sections, for ""quick use"", be sure to check the settings denoted with asterisks: + +### Image Tools + +![image_tools](https://github.com/user-attachments/assets/323984ad-2cd3-4816-8ee5-e8b3f5063bc0) + +\***1. Image Layer Selection** - use the dropdown to select the name of your image layer (here, the layer that contains the ribbon stain) + +(First load a 3D image using one of napari's native readers, or using the Cochlea-Synapseg .zarr reader (reads a .zarr with '3d/raw' and '3d/labeled').) + +\***2. Refresh Image Layer Selection** - update the list of available image layers in #1 + +**3. Pixel size information** - (in microns), used for some point readers to successfully convert real units to pixel coordinates. Can be left as 1 if this functionality is not needed. + +**4. Split channels** - splits multiple channels into separate image layers (useful for FIJI-saved .tif images) + +### Points Tools & Points to Labels + +![points_tools](https://github.com/user-attachments/assets/6b271d5c-51c1-4ca4-b3c0-683dddd69dc8) + +**5. Points Layer Selection and Refresh** - use the dropdown to select an existing points layer, use the refresh button to update the list (or skip to #8 if not loading in existing points) + +**6. Real -> Pixel Units** - if you've loaded some points were saved in real units, make sure the pixel size information above in #3 is correct, then click ""real -> pixel units"" + +**7. Channel Adjustment** - some points (like ImageJ/FIJI rois or CellCounter points), show up in the wrong z plane because their ""slice"" coordinates are a combination of both slice and channel info. If this happens, set the number of channels (in the original image, where the ROIs were created!), and then click ""chan -> z convert"". Z coordinates of the points layer will be divided by the number of channels specified. + +\***8. New Points Layer** - if starting annotation from scratch, click to create a new points layer. #5 should automatically select this new layer. + +\***9. Rotate to XY and \*10. Auto-adjust Z** - these convenient functions allow you to quickly annotate points in Napari's 3D view. Simply click ""Rotate to XY before adding new points. These points will now have the correct XY position but will have missing Z information. (Rotate out of XY to confirm.) Click ""Auto-adjust z"" and the z will automatically adjust to the brightest point. + +**11. Manually Edit Z** - useful for overlapping points, can be used to manually edit the z position of ONLY selected points. Use the +/- arrow keys for single z steps type in a number to move a larger amount. + +**12. Snap too Max** - will automatically adjust all points to their local max (search radius defined in pixels in Advanced Settings -> snap to max rad). Useful for adjusting quickly dropped points, but proceed with caution if you have close-together points. + +\***13. Points to Labels** - the key functionality of the module, creates a label layer by performing a local segmentation on all points. + +**14. Advanced Settings** - adjust settings for the points to labels function to optimize local segmentation and watershed separation of points. + +### Labels Tools + +![labels_tools](https://github.com/user-attachments/assets/6ef20ff6-61e2-4337-a177-8f957a67fb39) + +**15. Lables Layer Selection and Refresh** - use the dropdown to select an existing labels layer, use the refresh button to update the list + +**16. Make Labels Editable** - zarrs and other file formats tend to load in as dask arrays, which don't allow editing. Checking this box will make the labels layer editable by converting to a numpy array (will load the layer into memory, so be careful if dealing with large images!). This will allow you to edit the labels layer with tools like the paintbrush and eraser. Automatically enables if merging or removing labels is requested (see #17 and #19) + +\***17. Remove a Label** - use the labels layer eyedropper tool to identify the ID of an unwanted label, then type in the box and click ""Remove label"" + +**18. Max Label Display** - shows the current maximum label ID. If you're painting labels by hand and need a new label ID, increment above this number. Use the refresh button to the right to get an up-to-date number if you've made changes to your label layer. + +\***19. Merge labels** - if you have an existing labels layer, and then create new labels (e.g. from the points to labels function), select the layer you'd like to merge into your existing labels layer (i.e. box 15 and 19a should be different from one another!), and then click ""merge labels"". This function will automatically ensure overlapping label IDs are not used. + +**20. Labels to Points** - if wanted, you can take all your existing labels and convert them to a points layer based on their centroids. This may be helpful for quickly generating better labels using the points tools above. + +### Save to Zarr + +![save_zarr](https://github.com/user-attachments/assets/1d824f49-012f-4fac-8fa1-64d7d319cd34) + +Functionality to save to .zarr format. Saves image as '3d/raw' and labels as '3d/labeled'. Used for later auto-segmentation of ribbons (not live in this plugin yet, but coming soon!). + +\***21. File Path** - the directory in which to save the zarr; use the folder icon to search for an existing directory + +\***22. File Name** - the zarr name to save to; use the magnifying glass icon to select an existing .zarr + +**23. From Source** - set the file path and name to where the image layer was loaded from. (Caution: if you loaded a zarr, this will result in the zarr being overwritten!) + +\***24. Save 3D Only (recommended)** - saves the image and labels layers (selected in #1 and #15) in the specified .zarr, as 3d/raw and 3d/labeled, respectively. A reader is included with this plugin for this format as well. + +**25. Save 2D and 3D** - (not recommended) to be used in the future if 2D models are to be run on the data, saves both the 3D stacks as in 24, and then individual 2D slices for each z in 2d/raw/[z] and 2d/labeled/[z] + + + +## Contributing + +Contributions are very welcome. Tests can be run with [tox], please ensure +the coverage at least stays the same before you submit a pull request. + +## License + +Distributed under the terms of the [BSD-3] license, +""cochlea-synapseg"" is free and open source software + +## Issues + +If you encounter any problems, please [file an issue] along with a detailed description. + +[napari]: https://github.com/napari/napari +[Cookiecutter]: https://github.com/audreyr/cookiecutter +[@napari]: https://github.com/napari +[MIT]: http://opensource.org/licenses/MIT +[BSD-3]: http://opensource.org/licenses/BSD-3-Clause +[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt +[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt +[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0 +[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt +[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin + +[napari]: https://github.com/napari/napari +[tox]: https://tox.readthedocs.io/en/latest/ +[pip]: https://pypi.org/project/pip/ +[PyPI]: https://pypi.org/ +",text/markdown,,Cayla Miller,cayla@ucsd.edu," +Copyright (c) 2024, Cayla Miller +All rights reserved. + +Redistribution and use in source and binary forms, with or without +modification, are permitted provided that the following conditions are met: + +* Redistributions of source code must retain the above copyright notice, this + list of conditions and the following disclaimer. + +* Redistributions in binary form must reproduce the above copyright notice, + this list of conditions and the following disclaimer in the documentation + and/or other materials provided with the distribution. + +* Neither the name of copyright holder nor the names of its + contributors may be used to endorse or promote products derived from + this software without specific prior written permission. + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ""AS IS"" +AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE +IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE +DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE +FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL +DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR +SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER +CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, +OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE +OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'qtpy', 'scikit-image', 'scipy', 'zarr', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.9,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",cochlea-synapseg.write_multiple,Save multi-layer data with Cochlea SynapSeg,napari_cochlea_synapse_seg._writer:write_multiple,cochlea-synapseg.write_single_image,Save image data with Cochlea SynapSeg,napari_cochlea_synapse_seg._writer:write_single_image,cochlea-synapseg.make_sample_data,Load sample data from Cochlea SynapSeg,napari_cochlea_synapse_seg._sample_data:make_sample_data,cochlea-synapseg.make_gtwidget,SynapSeg - Ground Truth Widget,False,,,,,,,,,,cochlea-synapseg.make_gtwidget,Make GTWidget,napari_cochlea_synapse_seg:GTWidget,cochlea-synapseg.write_multiple,"['image*', 'labels*']",,cochlea-synapseg.write_single_image,['image'],['.npy'],,cochlea-synapseg.make_sample_data,unique_id.1,Cochlea SynapSeg,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +26,cryaleconcho,0.0.7,cryaleconcho,Napari plugin of algorithms for Panoptic Segmentation of organelles in EM,Ryan Conrad,BSD-3-Clause,https://github.com/volume-em/empanada-napari,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.1.0,cryaleconcho.test_widget,Create 2D Inference (Parameter Testing),empanada_napari._slice_inference:test_widget,,,,2.1,cryaleconcho,0.0.7,,Napari plugin of algorithms for Panoptic Segmentation of organelles in EM,"# empanada-napari **The preprint describing this work is now available [on bioRxiv](https://www.biorxiv.org/content/10.1101/2022.03.17.484806v1).** @@ -2295,13 +2823,13 @@ If you use results generated by this plugin in a publication, please cite: journal = {bioRxiv} } ``` -",text/markdown,https://github.com/volume-em/empanada-napari,Ryan Conrad,conradrw@nih.gov,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari >=0.4.16', 'numpy ==1.22', 'napari-plugin-engine >=0.1.4', 'scikit-image >=0.19', 'empanada-dl >=0.1.7', 'imagecodecs', 'openpyxl']",>=3.7,"['Bug Tracker, https://github.com/volume-em/empanada-napari/issues', 'Documentation, https://github.com/volume-em/empanada-napari#README.md', 'Source Code, https://github.com/volume-em/empanada-napari', 'User Support, https://github.com/volume-em/empanada-napari/issues']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,cryaleconcho.volume_inference_widget,Create 3D Inference,empanada_napari._volume_inference:volume_inference_widget,cryaleconcho.export_batch_segs,Export Segmentations,empanada_napari._export_batch_segs:export_batch_segs,cryaleconcho.label_counter_widget,Count Labels,empanada_napari._label_counter_widget:label_counter_widget,cryaleconcho.test_widget,2D Inference (Parameter Testing),False,cryaleconcho.volume_inference_widget,3D Inference,False,cryaleconcho.export_batch_segs,Export Segmentations,False,cryaleconcho.label_counter_widget,Count Labels,False,cryaleconcho.merge_labels,Create Merge Labels,empanada_napari._merge_split_widget:merge_labels,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,cryaleconcho.delete_labels,Create Delete Labels,empanada_napari._merge_split_widget:delete_labels,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,cryaleconcho.morph_labels,Create Morph Labels,empanada_napari._merge_split_widget:morph_labels,cryaleconcho.split_labels,Create Split Labels,empanada_napari._merge_split_widget:split_labels,cryaleconcho.filter_small_labels,Filter labels,empanada_napari._filter_small_labels:filter_small_labels,cryaleconcho.jump_to_label,Jump to label,empanada_napari._merge_split_widget:jump_to_label,cryaleconcho.find_next_available_label,Find next available label,empanada_napari._merge_split_widget:find_next_available_label,cryaleconcho.pick_patches,Pick finetune/training patches,empanada_napari._pick_patches:pick_patches,,cryaleconcho.merge_labels,Merge Labels,False,cryaleconcho.delete_labels,Delete Labels,False,cryaleconcho.morph_labels,Morph Labels,False,cryaleconcho.split_labels,Split Labels,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -23,cryocanvas,0.0.1,cryocanvas,A plugin for interactive segmentation of CryoET data using ML embeddings,Kyle Harrington,MIT,https://github.com/kephale/cryocanvas,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,,,,,,,2.1,cryocanvas,0.0.1,,A plugin for interactive segmentation of CryoET data using ML embeddings,"# cryocanvas +",text/markdown,https://github.com/volume-em/empanada-napari,Ryan Conrad,conradrw@nih.gov,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari >=0.4.16', 'numpy ==1.22', 'napari-plugin-engine >=0.1.4', 'scikit-image >=0.19', 'empanada-dl >=0.1.7', 'imagecodecs', 'openpyxl']",>=3.7,"['Bug Tracker, https://github.com/volume-em/empanada-napari/issues', 'Documentation, https://github.com/volume-em/empanada-napari#README.md', 'Source Code, https://github.com/volume-em/empanada-napari', 'User Support, https://github.com/volume-em/empanada-napari/issues']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,cryaleconcho.volume_inference_widget,Create 3D Inference,empanada_napari._volume_inference:volume_inference_widget,cryaleconcho.export_batch_segs,Export Segmentations,empanada_napari._export_batch_segs:export_batch_segs,cryaleconcho.label_counter_widget,Count Labels,empanada_napari._label_counter_widget:label_counter_widget,cryaleconcho.test_widget,2D Inference (Parameter Testing),False,cryaleconcho.volume_inference_widget,3D Inference,False,cryaleconcho.export_batch_segs,Export Segmentations,False,cryaleconcho.label_counter_widget,Count Labels,False,cryaleconcho.merge_labels,Create Merge Labels,empanada_napari._merge_split_widget:merge_labels,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,cryaleconcho.delete_labels,Create Delete Labels,empanada_napari._merge_split_widget:delete_labels,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,cryaleconcho.morph_labels,Create Morph Labels,empanada_napari._merge_split_widget:morph_labels,cryaleconcho.split_labels,Create Split Labels,empanada_napari._merge_split_widget:split_labels,cryaleconcho.filter_small_labels,Filter labels,empanada_napari._filter_small_labels:filter_small_labels,cryaleconcho.jump_to_label,Jump to label,empanada_napari._merge_split_widget:jump_to_label,cryaleconcho.find_next_available_label,Find next available label,empanada_napari._merge_split_widget:find_next_available_label,,cryaleconcho.merge_labels,Merge Labels,False,cryaleconcho.delete_labels,Delete Labels,False,cryaleconcho.morph_labels,Morph Labels,False,cryaleconcho.split_labels,Split Labels,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +27,cryocanvas,0.0.1,cryocanvas,A plugin for interactive segmentation of CryoET data using ML embeddings,Kyle Harrington,MIT,https://github.com/kephale/cryocanvas,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,,,,,,,2.1,cryocanvas,0.0.1,,A plugin for interactive segmentation of CryoET data using ML embeddings,"# cryocanvas A tool to support interactive machine learning for cryoET data ![cryocanvas screenshot](cover.png) -",text/markdown,https://github.com/kephale/cryocanvas,Kyle Harrington,czii@kyleharrington.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', 'toolz', 'scikit-learn', 'psygnal', 'superqt', 'zarr', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/kephale/cryocanvas/issues', 'Documentation, https://github.com/kephale/cryocanvas#README.md', 'Source Code, https://github.com/kephale/cryocanvas', 'User Support, https://github.com/kephale/cryocanvas/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation']",,,,,,,,,,cryocanvas.make_qwidget,Example QWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -24,cut-detector,1.2.1,Cut Detector,Automatic Cut Detector,Thomas Bonte,BSD-3-Clause,https://github.com/15bonte/cut-detector,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,cut-detector.whole_process,Single Video,cut_detector._widget:whole_process,,,,2.1,cut-detector,1.2.1,,Automatic Cut Detector,"# Cut Detector +",text/markdown,https://github.com/kephale/cryocanvas,Kyle Harrington,czii@kyleharrington.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', 'toolz', 'scikit-learn', 'psygnal', 'superqt', 'zarr', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/kephale/cryocanvas/issues', 'Documentation, https://github.com/kephale/cryocanvas#README.md', 'Source Code, https://github.com/kephale/cryocanvas', 'User Support, https://github.com/kephale/cryocanvas/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation']",,,,,,,,,,cryocanvas.make_qwidget,Example QWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +28,cut-detector,1.4.0,Cut Detector,Automatic Cut Detector,Thomas Bonte,BSD-3-Clause,https://github.com/15bonte/cut-detector,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,cut-detector.whole_process,Single Video,cut_detector._widget:whole_process,,,,2.1,cut-detector,1.4.0,,Automatic Cut Detector,"# Cut Detector [![License BSD-3](https://img.shields.io/pypi/l/cut-detector.svg?color=green)](https://github.com/15bonte/cut-detector/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/cut-detector.svg?color=green)](https://pypi.org/project/cut-detector) @@ -2312,7 +2840,7 @@ A tool to support interactive machine learning for cryoET data Automatic micro-tubule cut detector. -https://github.com/user-attachments/assets/89d63336-729c-43c1-8fa3-43a4ec4cfc87 +https://github.com/user-attachments/assets/356efbf6-d78a-44a0-ad94-de3de83f01ed --- @@ -2396,7 +2924,7 @@ Each detected cell division is labeled with one of the following categories: - MORE_THAN_TWO_DAUGHTER_TRACKS: Tripolar division. This category encompasses both actual tripolar divisions and wrong identifications of daughter cells (mainly caused by segmentation issues). - NEAR_BORDER: Division close to the border of the image, hence ignored as it is likely to be difficult to detect micro-tubule cuts. A division is classified as NEAR_BORDER as soon as the distance between 1 detected mid-body and the border of the image is less than 20px. - NO_CUT_DETECTED: Division whose mid-body was detected, but with all micro-tubule bridges classified as ""No cut"". Likely to be at the end of the video, cells dying before the end of division, or cells going out of frame. -- TOO_SHORT_CUT: First micro-tubule cut detected before 50 minutes. Ignored as this is very unlikely, so it is probably caused by a wrong division detection. +- TOO_SHORT_CUT: First micro-tubule cut detected before or at 50 minutes. Ignored as this is very unlikely, so it is probably caused by a wrong division detection. ## Contributing @@ -2431,8 +2959,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [Fiji]: https://imagej.net/software/fiji/ [NVIDIA]: https://www.nvidia.com/Download/index.aspx?lang=en-us [conda]: https://docs.conda.io/en/latest/ -",text/markdown,https://github.com/15bonte/cut-detector,Thomas Bonte,thomas.bonte@mines-paristech.fr,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['cellpose==3.0.9', 'pyimagej', 'cnn-framework==0.0.16', 'magicgui', 'pydantic==1.10.12', 'xmltodict', 'shapely', 'aicsimageio==4.14.0', 'fsspec==2023.6.0', 'charset-normalizer==3.3.0', 'napari[all]', 'laptrack==0.16.2', 'scikit-learn==1.5.0', 'numba>=0.59.1', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.9,"['Bug Tracker, https://github.com/15bonte/cut-detector/issues', 'Documentation, https://github.com/15bonte/cut-detector#README.md', 'Source Code, https://github.com/15bonte/cut-detector', 'User Support, https://github.com/15bonte/cut-detector/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,cut-detector.whole_process_folder,Folder,cut_detector._widget:whole_process_folder,,,,,,,cut-detector.whole_process,Single Video,False,cut-detector.whole_process_folder,Folder,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -25,cylindra,1.0.0b5,cylindra,"Spectral analysis, simulation and subtomogram averaging of heterogenic cylindrical structures",Hanjin Liu,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,cylindra.main_widget,Open main widget,cylindra.core:start_as_plugin,,,,2.3,cylindra,1.0.0b5,,"Spectral analysis, simulation and subtomogram averaging of heterogenic cylindrical structures","[![BSD 3-Clause License](https://img.shields.io/pypi/l/cylindra.svg?color=green)](https://github.com/hanjinliu/cylindra/blob/main/LICENSE) +",text/markdown,https://github.com/15bonte/cut-detector,Thomas Bonte,thomas.bonte@mines-paristech.fr,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['cellpose==3.0.9', 'pyimagej', 'cnn-framework==0.0.16', 'magicgui', 'pydantic==1.10.12', 'xmltodict', 'shapely', 'aicsimageio==4.14.0', 'fsspec==2023.6.0', 'charset-normalizer==3.3.0', 'napari[all]', 'laptrack==0.16.2', 'scikit-learn==1.5.0', 'numba>=0.59.1', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.9,"['Bug Tracker, https://github.com/15bonte/cut-detector/issues', 'Documentation, https://github.com/15bonte/cut-detector#README.md', 'Source Code, https://github.com/15bonte/cut-detector', 'User Support, https://github.com/15bonte/cut-detector/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,cut-detector.whole_process_folder,Folder,cut_detector._widget:whole_process_folder,,,,,,,cut-detector.whole_process,Single Video,False,cut-detector.whole_process_folder,Folder,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +29,cylindra,1.0.0b5,cylindra,"Spectral analysis, simulation and subtomogram averaging of heterogenic cylindrical structures",Hanjin Liu,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,cylindra.main_widget,Open main widget,cylindra.core:start_as_plugin,,,,2.3,cylindra,1.0.0b5,,"Spectral analysis, simulation and subtomogram averaging of heterogenic cylindrical structures","[![BSD 3-Clause License](https://img.shields.io/pypi/l/cylindra.svg?color=green)](https://github.com/hanjinliu/cylindra/blob/main/LICENSE) [![Python package index download statistics](https://img.shields.io/pypi/dm/cylindra.svg)](https://pypistats.org/packages/cylindra) [![PyPI version](https://badge.fury.io/py/cylindra.svg)](https://badge.fury.io/py/cylindra) [![codecov](https://codecov.io/gh/hanjinliu/cylindra/graph/badge.svg?token=X1F259JYT5)](https://codecov.io/gh/hanjinliu/cylindra) @@ -2533,8 +3061,8 @@ Hanjin Liu, Hiroshi Yamaguchi, Masahide Kikkawa, Tomohiro Shima bioRxiv 2024.04.30.591984; doi: https://doi.org/10.1101/2024.04.30.591984 ``` -",text/markdown; charset=UTF-8; variant=GFM,,Hanjin Liu,liuha@med.kobe-u.ac.jp,,"['Programming Language :: Rust', 'Programming Language :: Python :: Implementation :: CPython', 'Programming Language :: Python :: Implementation :: PyPy', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Framework :: napari']","['impy-array >=2.4.2', 'acryo >=0.4.13', 'macro-kit >=0.4.6', 'magicgui >=0.8.1', 'magic-class >=0.7.11', 'psygnal >=0.9.1', 'superqt[iconify] >=0.6.1', 'pydantic >=1.10.0', 'pydantic-compat', 'pyqtgraph >=0.12.4', 'pyarrow >=11.0.0', 'numpy >=1.23.0', 'scipy >=1.11.3', 'pandas >=1.5.0', 'polars >=1.1.0', 'scikit-image >=0.21.0', 'napari >=0.5.1', 'qtpy >=2.3.1', 'qt-command-palette >=0.0.7', 'matplotlib >=3.8.1', 'rich >=13.6.0', 'dask >=2023.12.1', ""pytest ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""scikit-learn >=1.2.2 ; extra == 'testing'"", ""mrcfile >=1.3.0 ; extra == 'testing'"", ""tifffile >=2023.2.28 ; extra == 'testing'"", ""starfile ; extra == 'testing'"", ""imodmodel ; extra == 'testing'"", ""cookiecutter ; extra == 'testing'"", ""maturin >=1.5.0, <2.0.0 ; extra == 'testing'"", ""pyqt5 ; extra == 'all'"", ""scikit-learn >=1.2.2 ; extra == 'all'"", ""mrcfile >=1.3.0 ; extra == 'all'"", ""tifffile >=2023.2.28 ; extra == 'all'"", ""starfile ; extra == 'all'"", ""imodmodel ; extra == 'all'"", ""cookiecutter ; extra == 'all'"", ""pyqt5 ; extra == 'docs'"", ""mkdocs >=1.5.3 ; extra == 'docs'"", ""mkdocs-autorefs >=0.5.0 ; extra == 'docs'"", ""mkdocs-gen-files >=0.5.0 ; extra == 'docs'"", ""mkdocs-material >=9.5.2 ; extra == 'docs'"", ""mkdocs-material-extensions >=1.3.1 ; extra == 'docs'"", ""mkdocstrings >=0.24.0 ; extra == 'docs'"", ""mkdocstrings-python >=1.7.5 ; extra == 'docs'"", ""maturin >=1.5.0, <2.0.0 ; extra == 'docs'""]",>=3.10,,"['testing', 'all', 'docs']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,cylindra.main_widget,cylindra,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -26,darth-d,0.4.0,darth-d,A simple to use image generator based on OpenAIs DALL-E,Robert Haase,BSD-3-Clause,https://github.com/haesleinhuepf/darth-d/,656e2c6ecd54e7506f4113ad,['conda'],,https://pypi.org/project/darth-d,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/darth-d,http://api.anaconda.org/packages/conda-forge/darth-d,http://anaconda.org/conda-forge/darth-d,"['0.1.0', '0.4.0']",0.4.0,0.4.0,['noarch'],5.0,https://github.com/haesleinhuepf/darth-d,['pyhd8ed1ab_0'],0.1.0,conda-forge/darth-d/0.1.0,1.0,0.0,2023-12-04 19:45:47.303000+00:00,2023-12-08 23:32:31.082000+00:00,conda,noarch/darth-d-0.1.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['numpy', 'openai', 'pillow', 'python >=3.8', 'stackview >=0.7.1']",noarch,1701719039336.0,None-any-None,pyhd8ed1ab_0,2023-12-04 19:45:47.761000+00:00,2ca187ed69d602bdc46cb1ca776f87ab,e8d7986aaaaebccca5c667e5b46a18a07ecbc79580d80ba8f1284c6c3599f64e,13181.0,conda-forge/darth-d/0.1.0/noarch/darth-d-0.1.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/darth-d/0.1.0/noarch/darth-d-0.1.0-pyhd8ed1ab_0.conda,conda,0.1.0,conda-forge,['main'],public,,0.2.1,darth-d.napari_experimental_provide_function,create_gui,darth_d._napari_plugin:napari_experimental_provide_function,,,,2.1,darth-d,0.4.0,,A simple to use image generator based on OpenAIs DALL-E,"# Darth-D +",text/markdown; charset=UTF-8; variant=GFM,,Hanjin Liu,liuha@med.kobe-u.ac.jp,,"['Programming Language :: Rust', 'Programming Language :: Python :: Implementation :: CPython', 'Programming Language :: Python :: Implementation :: PyPy', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Framework :: napari']","['impy-array >=2.4.2', 'acryo >=0.4.13', 'macro-kit >=0.4.6', 'magicgui >=0.8.1', 'magic-class >=0.7.11', 'psygnal >=0.9.1', 'superqt[iconify] >=0.6.1', 'pydantic >=1.10.0', 'pydantic-compat', 'pyqtgraph >=0.12.4', 'pyarrow >=11.0.0', 'numpy >=1.23.0', 'scipy >=1.11.3', 'pandas >=1.5.0', 'polars >=1.1.0', 'scikit-image >=0.21.0', 'napari >=0.5.1', 'qtpy >=2.3.1', 'qt-command-palette >=0.0.7', 'matplotlib >=3.8.1', 'rich >=13.6.0', 'dask >=2023.12.1', ""pytest ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""scikit-learn >=1.2.2 ; extra == 'testing'"", ""mrcfile >=1.3.0 ; extra == 'testing'"", ""tifffile >=2023.2.28 ; extra == 'testing'"", ""starfile ; extra == 'testing'"", ""imodmodel ; extra == 'testing'"", ""cookiecutter ; extra == 'testing'"", ""maturin >=1.5.0, <2.0.0 ; extra == 'testing'"", ""pyqt5 ; extra == 'all'"", ""scikit-learn >=1.2.2 ; extra == 'all'"", ""mrcfile >=1.3.0 ; extra == 'all'"", ""tifffile >=2023.2.28 ; extra == 'all'"", ""starfile ; extra == 'all'"", ""imodmodel ; extra == 'all'"", ""cookiecutter ; extra == 'all'"", ""pyqt5 ; extra == 'docs'"", ""mkdocs >=1.5.3 ; extra == 'docs'"", ""mkdocs-autorefs >=0.5.0 ; extra == 'docs'"", ""mkdocs-gen-files >=0.5.0 ; extra == 'docs'"", ""mkdocs-material >=9.5.2 ; extra == 'docs'"", ""mkdocs-material-extensions >=1.3.1 ; extra == 'docs'"", ""mkdocstrings >=0.24.0 ; extra == 'docs'"", ""mkdocstrings-python >=1.7.5 ; extra == 'docs'"", ""maturin >=1.5.0, <2.0.0 ; extra == 'docs'""]",>=3.10,,"['testing', 'all', 'docs']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,cylindra.main_widget,cylindra,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +30,darth-d,0.4.0,darth-d,A simple to use image generator based on OpenAIs DALL-E,Robert Haase,BSD-3-Clause,https://github.com/haesleinhuepf/darth-d/,656e2c6ecd54e7506f4113ad,['conda'],,https://pypi.org/project/darth-d,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/darth-d,http://api.anaconda.org/packages/conda-forge/darth-d,http://anaconda.org/conda-forge/darth-d,"['0.1.0', '0.4.0']",0.4.0,0.4.0,['noarch'],5.0,https://github.com/haesleinhuepf/darth-d,['pyhd8ed1ab_0'],0.1.0,conda-forge/darth-d/0.1.0,1.0,0.0,2023-12-04 19:45:47.303000+00:00,2023-12-08 23:32:31.082000+00:00,conda,noarch/darth-d-0.1.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['numpy', 'openai', 'pillow', 'python >=3.8', 'stackview >=0.7.1']",noarch,1701719039336.0,None-any-None,pyhd8ed1ab_0,2023-12-04 19:45:47.761000+00:00,2ca187ed69d602bdc46cb1ca776f87ab,e8d7986aaaaebccca5c667e5b46a18a07ecbc79580d80ba8f1284c6c3599f64e,13181.0,conda-forge/darth-d/0.1.0/noarch/darth-d-0.1.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/darth-d/0.1.0/noarch/darth-d-0.1.0-pyhd8ed1ab_0.conda,conda,0.1.0,conda-forge,['main'],public,,0.2.1,darth-d.napari_experimental_provide_function,create_gui,darth_d._napari_plugin:napari_experimental_provide_function,,,,2.1,darth-d,0.4.0,,A simple to use image generator based on OpenAIs DALL-E,"# Darth-D [![License](https://img.shields.io/pypi/l/darth-d.svg?color=green)](https://github.com/haesleinhuepf/darth-d/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/darth-d.svg?color=green)](https://pypi.org/project/darth-d) [![Python Version](https://img.shields.io/pypi/pyversions/darth-d.svg?color=green)](https://python.org) @@ -2620,8 +3148,8 @@ Distributed under the terms of the [BSD-3] license, [BSD-3]: http://opensource.org/licenses/BSD-3-Clause -",text/markdown,https://github.com/haesleinhuepf/darth-d/,Robert Haase,robert.haase@uni-leipzig.de,BSD-3-Clause,"['Framework :: napari', 'License :: OSI Approved :: BSD License', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent']","['openai >=1.2.0', 'Pillow', 'numpy', 'stackview >=0.7.1']",>=3.8,"['Bug Tracker, https://github.com/haesleinhuepf/darth-d/issues', 'Documentation, https://github.com/haesleinhuepf/darth-d/', 'Source Code, https://github.com/haesleinhuepf/darth-d', 'User Support, https://forum.image.sc/']",,True,0.4.0,conda-forge/darth-d/0.4.0,,,,,conda,noarch/darth-d-0.4.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine', 'napari-tools-menu', 'numpy', 'openai >=1.2.0', 'pillow', 'python >=3.7', 'scikit-image', 'stackview >=0.7.1']",pyhd8ed1ab_0,1702078224326.0,None-any-None,noarch,2023-12-08 23:32:29.645000+00:00,25bb6e7231d0348e982b98694de23283,9675bb48c5272811a93ea20311b56e792b0a41166e714681639743b27c988bed,13664.0,conda-forge/darth-d/0.4.0/noarch/darth-d-0.4.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/darth-d/0.4.0/noarch/darth-d-0.4.0-pyhd8ed1ab_0.conda,conda,0.4.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,darth-d.napari_experimental_provide_function,vary_gui,darth_d._napari_plugin:napari_experimental_provide_function,darth-d.napari_experimental_provide_function,replace_gui,darth_d._napari_plugin:napari_experimental_provide_function,,,,darth-d.napari_experimental_provide_function,create_gui,True,darth-d.napari_experimental_provide_function,vary_gui,True,darth-d.napari_experimental_provide_function,replace_gui,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -27,depalma-napari-omero,0.1.4,De Palma lab,Napari interface for the De Palma lab.,,"BSD 3-Clause License +",text/markdown,https://github.com/haesleinhuepf/darth-d/,Robert Haase,robert.haase@uni-leipzig.de,BSD-3-Clause,"['Framework :: napari', 'License :: OSI Approved :: BSD License', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent']","['openai >=1.2.0', 'Pillow', 'numpy', 'stackview >=0.7.1']",>=3.8,"['Bug Tracker, https://github.com/haesleinhuepf/darth-d/issues', 'Documentation, https://github.com/haesleinhuepf/darth-d/', 'Source Code, https://github.com/haesleinhuepf/darth-d', 'User Support, https://forum.image.sc/']",,True,0.4.0,conda-forge/darth-d/0.4.0,,,,,conda,noarch/darth-d-0.4.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine', 'napari-tools-menu', 'numpy', 'openai >=1.2.0', 'pillow', 'python >=3.7', 'scikit-image', 'stackview >=0.7.1']",pyhd8ed1ab_0,1702078224326.0,None-any-None,noarch,2023-12-08 23:32:29.645000+00:00,25bb6e7231d0348e982b98694de23283,9675bb48c5272811a93ea20311b56e792b0a41166e714681639743b27c988bed,13664.0,conda-forge/darth-d/0.4.0/noarch/darth-d-0.4.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/darth-d/0.4.0/noarch/darth-d-0.4.0-pyhd8ed1ab_0.conda,conda,0.4.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,darth-d.napari_experimental_provide_function,vary_gui,darth_d._napari_plugin:napari_experimental_provide_function,darth-d.napari_experimental_provide_function,replace_gui,darth_d._napari_plugin:napari_experimental_provide_function,,,,darth-d.napari_experimental_provide_function,create_gui,True,darth-d.napari_experimental_provide_function,vary_gui,True,darth-d.napari_experimental_provide_function,replace_gui,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +31,depalma-napari-omero,0.1.4,De Palma lab,Napari interface for the De Palma lab.,,"BSD 3-Clause License Copyright (c) 2024, EPFL All rights reserved. @@ -2736,8 +3264,8 @@ DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE -OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'License :: OSI Approved :: BSD License', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Topic :: Scientific/Engineering :: Image Processing']","['napari[all] >=0.4.16', 'qtpy', 'magicgui', 'napari-label-focus >=0.0.9', 'napari-remove-objects', 'mousetumornet', 'ezomero ==1.1.1', 'numpy', 'pandas', 'trackpy', 'imagecodecs[all]', 'tifffile', 'pooch']","<3.10,>=3.9","['homepage, https://github.com/EPFL-Center-for-Imaging/depalma-napari-omero', 'repository, https://github.com/EPFL-Center-for-Imaging/depalma-napari-omero']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,depalma-napari-omero.start,OMERO interface,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -28,devbio-napari,0.10.1,devbio-napari,A bundle of napari plugins useful for 3D+t image processing and analysis for studying developmental biology.,Robert Haase,BSD-3,https://github.com/haesleinhuepf/devbio-napari,624da3ff5b16eaa913203c93,['conda'],,https://github.com/haesleinhuepf/devbio-napari,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/devbio-napari,http://api.anaconda.org/packages/conda-forge/devbio-napari,http://anaconda.org/conda-forge/devbio-napari,"['0.1.5', '0.4.0', '0.5.0', '0.5.2', '0.5.3', '0.5.4', '0.5.5', '0.5.6', '0.5.7', '0.5.8', '0.5.9', '0.5.10', '0.6.0', '0.7.0', '0.7.1', '0.8.0', '0.8.1', '0.10.0', '0.10.1']",0.10.1,0.10.1,['noarch'],21.0,,"['linux_h41d4057_0', 'linux_h41d4057_1', 'osx_hd1c38e8_0', 'osx_hd1c38e8_1', 'pyhd8ed1ab_0', 'pyhd8ed1ab_1', 'win_h08f2357_0', 'win_h08f2357_1']",0.1.5,conda-forge/devbio-napari/0.1.5,1.0,0.0,2022-04-06 14:30:20.409000+00:00,2023-06-11 13:38:16.889000+00:00,conda,noarch/devbio-napari-0.1.5-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-3d-ortho-viewer', 'napari-accelerated-pixel-and-object-classification', 'napari-aicsimageio', 'napari-animation', 'napari-brightness-contrast', 'napari-clusters-plotter', 'napari-crop', 'napari-curtain', 'napari-folder-browser', 'napari-itk-io', 'napari-ome-zarr', 'napari-plot-profile', 'napari-plugin-engine >=0.1.4', 'napari-plugin-search', 'napari-pyclesperanto-assistant', 'napari-segment-blobs-and-things-with-membranes', 'napari-simpleitk-image-processing', 'napari-skimage-regionprops', 'napari-tabu', 'napari-workflow-optimizer', 'numpy >=1.21.4', 'platymatch', 'python >=3.7', 'redlionfish']",noarch,1649255158390.0,None-any-None,pyhd8ed1ab_0,2022-04-06 14:30:21.079000+00:00,349273c7b2dded57b62504da0451a924,None,9137.0,conda-forge/devbio-napari/0.1.5/noarch/devbio-napari-0.1.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/devbio-napari/0.1.5/noarch/devbio-napari-0.1.5-pyhd8ed1ab_0.tar.bz2,conda,0.1.5,conda-forge,['main'],public,,0.2.1,,,,,,,2.1,devbio-napari,0.10.1,,A bundle of napari plugins useful for 3D+t image processing and analysis for studying developmental biology.,"# devbio-napari +OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'License :: OSI Approved :: BSD License', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Topic :: Scientific/Engineering :: Image Processing']","['napari[all] >=0.4.16', 'qtpy', 'magicgui', 'napari-label-focus >=0.0.9', 'napari-remove-objects', 'mousetumornet', 'ezomero ==1.1.1', 'numpy', 'pandas', 'trackpy', 'imagecodecs[all]', 'tifffile', 'pooch']","<3.10,>=3.9","['homepage, https://github.com/EPFL-Center-for-Imaging/depalma-napari-omero', 'repository, https://github.com/EPFL-Center-for-Imaging/depalma-napari-omero']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,depalma-napari-omero.start,OMERO interface,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +32,devbio-napari,0.11.0,devbio-napari,A bundle of napari plugins useful for 3D+t image processing and analysis for studying developmental biology.,Robert Haase,BSD-3,https://github.com/haesleinhuepf/devbio-napari,624da3ff5b16eaa913203c93,['conda'],,https://github.com/haesleinhuepf/devbio-napari,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/devbio-napari,http://api.anaconda.org/packages/conda-forge/devbio-napari,http://anaconda.org/conda-forge/devbio-napari,"['0.1.5', '0.4.0', '0.5.0', '0.5.2', '0.5.3', '0.5.4', '0.5.5', '0.5.6', '0.5.7', '0.5.8', '0.5.9', '0.5.10', '0.6.0', '0.7.0', '0.7.1', '0.8.0', '0.8.1', '0.10.0', '0.10.1']",0.10.1,0.10.1,['noarch'],49.0,,"['linux_h0d859eb_1', 'linux_h41d4057_0', 'linux_h41d4057_1', 'osx_h31c8845_1', 'osx_hd1c38e8_0', 'osx_hd1c38e8_1', 'pyhd8ed1ab_0', 'pyhd8ed1ab_1', 'win_h08f2357_0', 'win_h08f2357_1', 'win_h5737063_1']",0.1.5,conda-forge/devbio-napari/0.1.5,1.0,0.0,2022-04-06 14:30:20.409000+00:00,2024-10-29 11:12:16.517000+00:00,conda,noarch/devbio-napari-0.1.5-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-3d-ortho-viewer', 'napari-accelerated-pixel-and-object-classification', 'napari-aicsimageio', 'napari-animation', 'napari-brightness-contrast', 'napari-clusters-plotter', 'napari-crop', 'napari-curtain', 'napari-folder-browser', 'napari-itk-io', 'napari-ome-zarr', 'napari-plot-profile', 'napari-plugin-engine >=0.1.4', 'napari-plugin-search', 'napari-pyclesperanto-assistant', 'napari-segment-blobs-and-things-with-membranes', 'napari-simpleitk-image-processing', 'napari-skimage-regionprops', 'napari-tabu', 'napari-workflow-optimizer', 'numpy >=1.21.4', 'platymatch', 'python >=3.7', 'redlionfish']",noarch,1649255158390.0,None-any-None,pyhd8ed1ab_0,2022-04-06 14:30:21.079000+00:00,349273c7b2dded57b62504da0451a924,None,9137.0,conda-forge/devbio-napari/0.1.5/noarch/devbio-napari-0.1.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/devbio-napari/0.1.5/noarch/devbio-napari-0.1.5-pyhd8ed1ab_0.tar.bz2,conda,0.1.5,conda-forge,['main'],public,,0.2.1,,,,,,,2.1,devbio-napari,0.11.0,,A bundle of napari plugins useful for 3D+t image processing and analysis for studying developmental biology.,"# devbio-napari [![License](https://img.shields.io/pypi/l/devbio-napari.svg?color=green)](https://github.com/haesleinhuepf/devbio-napari/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/devbio-napari.svg?color=green)](https://pypi.org/project/devbio-napari) @@ -2810,6 +3338,8 @@ A bundle of napari plugins useful for 3D+t image processing and analysis for stu * Quantification * [skimage-regionprops](https://www.napari-hub.org/plugins/napari-skimage-regionprops) * Quantification +* [stl-exporter](https://www.napari-hub.org/plugins/napari-stl-exporter) + * File input/output * [tabu](https://www.napari-hub.org/plugins/napari-tabu) * Interaction * [the-segmentation-game](https://www.napari-hub.org/plugins/the-segmentation-game) @@ -2826,16 +3356,10 @@ A bundle of napari plugins useful for 3D+t image processing and analysis for stu ## Installation You can install `devbio-napari` via conda/mamba. If you have never used conda before, please [read this guide first](https://biapol.github.io/blog/mara_lampert/getting_started_with_mambaforge_and_python/readme.html). -Start by installing mamba in your base environment: +Start by creating an environment using mamba. ``` -conda install mamba -c conda-forge -``` - -Afterwards, create an environment using mamba. - -``` -mamba create --name devbio-napari-env python=3.9 devbio-napari -c conda-forge -c pytorch +mamba create --name devbio-napari-env napari=0.4.19 python=3.9 devbio-napari pyqt -c conda-forge -c pytorch ``` Afterwards, activate the environment like this: @@ -2925,8 +3449,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/haesleinhuepf/devbio-napari,Robert Haase,robert.haase@tu-dresden.de,BSD-3,"['Development Status :: 3 - Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'npe2 (<0.7.0)', 'numpy (>=1.21.4)', 'napari-pyclesperanto-assistant', 'napari-skimage-regionprops', 'napari-animation', 'PlatyMatch', 'napari-plot-profile', 'napari-accelerated-pixel-and-object-classification', 'napari-brightness-contrast', 'napari-plugin-search', 'napari-segment-blobs-and-things-with-membranes', 'napari-simpleitk-image-processing', 'napari-folder-browser', 'napari-crop', 'napari-clusters-plotter (>=0.7.1)', 'napari-tabu', 'napari-workflow-optimizer', 'napari-workflow-inspector', 'napari-curtain', 'napari-layer-details-display', 'napari', 'vispy', 'napari-mouse-controls', 'the-segmentation-game', 'napari-blob-detection', 'jupyterlab', 'napari-czifile2', 'napari-roi', 'pydantic (!=1.10.0)', 'napari-pystackreg', 'imageio (!=2.22.1)', 'redlionfish', 'jupyter-server (<2.0.0)', 'seaborn']",>=3.8,"['Bug Tracker, https://github.com/haesleinhuepf/devbio-napari/issues', 'Documentation, https://github.com/haesleinhuepf/devbio-napari#README.md', 'Source Code, https://github.com/haesleinhuepf/devbio-napari', 'User Support, https://github.com/haesleinhuepf/devbio-napari/issues']",,True,0.4.0,conda-forge/devbio-napari/0.4.0,0.5.0,conda-forge/devbio-napari/0.5.0,0.5.2,conda-forge/devbio-napari/0.5.2,conda,noarch/devbio-napari-0.4.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,True,python,"['napari-3d-ortho-viewer', 'napari-accelerated-pixel-and-object-classification', 'napari-aicsimageio', 'napari-animation', 'napari-brightness-contrast', 'napari-clusters-plotter', 'napari-crop', 'napari-curtain', 'napari-folder-browser', 'napari-itk-io', 'napari-ome-zarr', 'napari-plot-profile', 'napari-plugin-engine >=0.1.4', 'napari-plugin-search', 'napari-pyclesperanto-assistant', 'napari-segment-blobs-and-things-with-membranes', 'napari-simpleitk-image-processing', 'napari-skimage-regionprops', 'napari-tabu', 'napari-tools-menu', 'napari-workflow-optimizer', 'numpy >=1.21.4', 'platymatch', 'python >=3.7', 'redlionfish']",pyhd8ed1ab_0,1649781008806.0,None-any-None,noarch,2022-04-12 16:34:51.753000+00:00,e88da1b7691533750efdbe0fb1f6bc9d,None,10522.0,conda-forge/devbio-napari/0.4.0/noarch/devbio-napari-0.4.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/devbio-napari/0.4.0/noarch/devbio-napari-0.4.0-pyhd8ed1ab_0.tar.bz2,conda,0.4.0,conda-forge,['main'],conda,noarch/devbio-napari-0.5.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,True,python,"['napari-3d-ortho-viewer', 'napari-accelerated-pixel-and-object-classification', 'napari-aicsimageio', 'napari-animation', 'napari-brightness-contrast', 'napari-clusters-plotter', 'napari-crop', 'napari-curtain', 'napari-folder-browser', 'napari-itk-io', 'napari-ome-zarr', 'napari-plot-profile', 'napari-plugin-engine >=0.1.4', 'napari-plugin-search', 'napari-pyclesperanto-assistant', 'napari-segment-blobs-and-things-with-membranes', 'napari-simpleitk-image-processing', 'napari-skimage-regionprops', 'napari-tabu', 'napari-tools-menu', 'napari-workflow-optimizer', 'numpy >=1.21.4', 'platymatch', 'python >=3.7', 'redlionfish']",noarch,1650583416020.0,None-any-None,pyhd8ed1ab_0,2022-04-21 23:27:52.946000+00:00,cc716d0f5b4fe5bd9d452f457fc647d8,None,10935.0,conda-forge/devbio-napari/0.5.0/noarch/devbio-napari-0.5.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/devbio-napari/0.5.0/noarch/devbio-napari-0.5.0-pyhd8ed1ab_0.tar.bz2,conda,0.5.0,conda-forge,['main'],conda,noarch/devbio-napari-0.5.0-pyhd8ed1ab_1.tar.bz2,None-any-None,True,noarch,pyhd8ed1ab_1,1.0,"['napari-3d-ortho-viewer', 'napari-accelerated-pixel-and-object-classification', 'napari-animation', 'napari-brightness-contrast', 'napari-clusters-plotter', 'napari-crop', 'napari-curtain', 'napari-folder-browser', 'napari-layer-details-display', 'napari-plot-profile', 'napari-plugin-engine >=0.1.4', 'napari-plugin-search', 'napari-pyclesperanto-assistant', 'napari-segment-blobs-and-things-with-membranes', 'napari-simpleitk-image-processing', 'napari-skimage-regionprops', 'napari-tabu', 'napari-tools-menu', 'napari-workflow-optimizer', 'numpy >=1.21.4', 'platymatch', 'python >=3.7', 'redlionfish']",BSD-3-Clause,python,1650628892426.0,2022-04-22 12:05:59.144000+00:00,ce9e515e441e6bc1666b5d8834e2d984,None,10914.0,conda-forge/devbio-napari/0.5.0/noarch/devbio-napari-0.5.0-pyhd8ed1ab_1.tar.bz2,//api.anaconda.org/download/conda-forge/devbio-napari/0.5.0/noarch/devbio-napari-0.5.0-pyhd8ed1ab_1.tar.bz2,conda,0.5.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,0.5.3,conda-forge/devbio-napari/0.5.3,0.5.4,conda-forge/devbio-napari/0.5.4,0.5.5,conda-forge/devbio-napari/0.5.5,conda,noarch/devbio-napari-0.5.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,True,python,"['napari-3d-ortho-viewer', 'napari-accelerated-pixel-and-object-classification', 'napari-animation', 'napari-brightness-contrast', 'napari-clusters-plotter', 'napari-crop', 'napari-curtain', 'napari-folder-browser', 'napari-layer-details-display', 'napari-plot-profile', 'napari-plugin-engine >=0.1.4', 'napari-plugin-search', 'napari-pyclesperanto-assistant', 'napari-segment-blobs-and-things-with-membranes', 'napari-simpleitk-image-processing', 'napari-skimage-regionprops', 'napari-tabu', 'napari-tools-menu', 'napari-workflow-optimizer', 'numpy >=1.21.4', 'platymatch', 'python >=3.7', 'redlionfish']",noarch,1650648440322.0,None-any-None,pyhd8ed1ab_0,2022-04-22 17:31:19.156000+00:00,f8e11249545be457d31bb638cae31eba,None,10883.0,conda-forge/devbio-napari/0.5.2/noarch/devbio-napari-0.5.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/devbio-napari/0.5.2/noarch/devbio-napari-0.5.2-pyhd8ed1ab_0.tar.bz2,conda,0.5.2,conda-forge,['main'],conda,noarch/devbio-napari-0.5.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,True,python,"['napari-3d-ortho-viewer', 'napari-accelerated-pixel-and-object-classification', 'napari-animation', 'napari-brightness-contrast', 'napari-clusters-plotter', 'napari-crop', 'napari-curtain', 'napari-folder-browser', 'napari-layer-details-display', 'napari-plot-profile', 'napari-plugin-engine >=0.1.4', 'napari-plugin-search', 'napari-pyclesperanto-assistant', 'napari-segment-blobs-and-things-with-membranes', 'napari-simpleitk-image-processing', 'napari-skimage-regionprops', 'napari-tabu', 'napari-tools-menu', 'napari-workflow-optimizer', 'numpy >=1.21.4', 'platymatch', 'python >=3.7', 'redlionfish', 'vispy <=0.9.6']",noarch,1650812906880.0,None-any-None,pyhd8ed1ab_0,2022-04-24 15:12:45.383000+00:00,52fd20e8ca676a39d4ac55a7c148490a,None,10912.0,conda-forge/devbio-napari/0.5.3/noarch/devbio-napari-0.5.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/devbio-napari/0.5.3/noarch/devbio-napari-0.5.3-pyhd8ed1ab_0.tar.bz2,conda,0.5.3,conda-forge,['main'],conda,noarch/devbio-napari-0.5.4-pyhd8ed1ab_0.tar.bz2,None-any-None,True,noarch,pyhd8ed1ab_0,0.0,"['napari-3d-ortho-viewer', 'napari-accelerated-pixel-and-object-classification', 'napari-animation', 'napari-brightness-contrast', 'napari-clusters-plotter', 'napari-crop', 'napari-curtain', 'napari-folder-browser', 'napari-layer-details-display', 'napari-plot-profile', 'napari-plugin-engine >=0.1.4', 'napari-plugin-search', 'napari-pyclesperanto-assistant', 'napari-segment-blobs-and-things-with-membranes', 'napari-simpleitk-image-processing', 'napari-skimage-regionprops', 'napari-tabu', 'napari-tools-menu', 'napari-workflow-inspector', 'napari-workflow-optimizer', 'numpy >=1.21.4', 'platymatch', 'python >=3.7', 'redlionfish', 'vispy <=0.9.6']",BSD-3-Clause,python,1652510625979.0,2022-05-14 06:47:04.544000+00:00,d58e13f05c7afcd7422584592157532f,None,10937.0,conda-forge/devbio-napari/0.5.4/noarch/devbio-napari-0.5.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/devbio-napari/0.5.4/noarch/devbio-napari-0.5.4-pyhd8ed1ab_0.tar.bz2,conda,0.5.4,conda-forge,['main'],,,,,,,0.5.6,conda-forge/devbio-napari/0.5.6,0.5.7,conda-forge/devbio-napari/0.5.7,conda,noarch/devbio-napari-0.5.5-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,True,python,"['napari-3d-ortho-viewer', 'napari-accelerated-pixel-and-object-classification', 'napari-animation', 'napari-brightness-contrast', 'napari-clusters-plotter', 'napari-crop', 'napari-curtain', 'napari-folder-browser', 'napari-layer-details-display', 'napari-plot-profile', 'napari-plugin-engine >=0.1.4', 'napari-plugin-search', 'napari-pyclesperanto-assistant', 'napari-segment-blobs-and-things-with-membranes', 'napari-simpleitk-image-processing', 'napari-skimage-regionprops', 'napari-tabu', 'napari-tools-menu', 'napari-workflow-inspector', 'napari-workflow-optimizer', 'numpy >=1.21.4', 'platymatch', 'python >=3.7', 'redlionfish', 'vispy <=0.9.6']",noarch,1654378221407.0,None-any-None,pyhd8ed1ab_0,2022-06-04 21:35:00.538000+00:00,194ba2a97a5876167b22555b4be828e5,None,11137.0,conda-forge/devbio-napari/0.5.5/noarch/devbio-napari-0.5.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/devbio-napari/0.5.5/noarch/devbio-napari-0.5.5-pyhd8ed1ab_0.tar.bz2,conda,0.5.5,conda-forge,['main'],conda,noarch/devbio-napari-0.5.6-pyhd8ed1ab_0.tar.bz2,None-any-None,True,noarch,pyhd8ed1ab_0,0.0,"['napari <=0.4.15', 'napari-3d-ortho-viewer', 'napari-accelerated-pixel-and-object-classification', 'napari-animation', 'napari-blob-detection', 'napari-brightness-contrast', 'napari-clusters-plotter', 'napari-crop', 'napari-curtain', 'napari-folder-browser', 'napari-layer-details-display', 'napari-mouse-controls', 'napari-plot-profile', 'napari-plugin-engine >=0.1.4', 'napari-plugin-search', 'napari-pyclesperanto-assistant', 'napari-segment-blobs-and-things-with-membranes', 'napari-simpleitk-image-processing', 'napari-skimage-regionprops', 'napari-tabu', 'napari-time-slicer', 'napari-tools-menu', 'napari-workflow-inspector', 'napari-workflow-optimizer', 'napari-workflows', 'numpy >=1.21.4', 'platymatch', 'python >=3.7', 'redlionfish', 'the-segmentation-game', 'vispy <=0.9.6']",BSD-3-Clause,python,1655421087319.0,2022-06-16 23:14:56.026000+00:00,48ac1fdf9789a3a1354725f673a065e9,None,11642.0,conda-forge/devbio-napari/0.5.6/noarch/devbio-napari-0.5.6-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/devbio-napari/0.5.6/noarch/devbio-napari-0.5.6-pyhd8ed1ab_0.tar.bz2,conda,0.5.6,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,conda,noarch/devbio-napari-0.5.7-pyhd8ed1ab_0.tar.bz2,None-any-None,True,noarch,pyhd8ed1ab_0,0.0,"['cellpose-napari', 'jupyterlab', 'napari <=0.4.15', 'napari-3d-ortho-viewer', 'napari-accelerated-pixel-and-object-classification', 'napari-animation', 'napari-blob-detection', 'napari-brightness-contrast', 'napari-clusters-plotter', 'napari-crop', 'napari-curtain', 'napari-folder-browser', 'napari-layer-details-display', 'napari-mouse-controls', 'napari-plot-profile', 'napari-plugin-engine >=0.1.4', 'napari-plugin-search', 'napari-pyclesperanto-assistant', 'napari-segment-blobs-and-things-with-membranes', 'napari-simpleitk-image-processing', 'napari-skimage-regionprops', 'napari-tabu', 'napari-time-slicer', 'napari-tools-menu', 'napari-workflow-inspector', 'napari-workflow-optimizer', 'napari-workflows', 'numpy >=1.21.4', 'platymatch', 'python >=3.7', 'redlionfish', 'the-segmentation-game', 'vispy <=0.9.6']",BSD-3-Clause,python,1655555738447.0,2022-06-18 12:40:39.440000+00:00,d163acef93807f8fbabab8162395c570,None,11648.0,conda-forge/devbio-napari/0.5.7/noarch/devbio-napari-0.5.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/devbio-napari/0.5.7/noarch/devbio-napari-0.5.7-pyhd8ed1ab_0.tar.bz2,conda,0.5.7,conda-forge,['main'],0.5.8,conda-forge/devbio-napari/0.5.8,conda,noarch/devbio-napari-0.5.8-pyhd8ed1ab_0.tar.bz2,None-any-None,True,noarch,pyhd8ed1ab_0,0.0,"['cellpose-napari', 'jupyterlab', 'napari <=0.4.15', 'napari-3d-ortho-viewer', 'napari-accelerated-pixel-and-object-classification', 'napari-animation', 'napari-blob-detection', 'napari-brightness-contrast', 'napari-clusters-plotter', 'napari-crop', 'napari-curtain', 'napari-folder-browser', 'napari-layer-details-display', 'napari-mouse-controls', 'napari-plot-profile', 'napari-plugin-engine >=0.1.4', 'napari-plugin-search', 'napari-pyclesperanto-assistant', 'napari-segment-blobs-and-things-with-membranes', 'napari-simpleitk-image-processing', 'napari-skimage-regionprops', 'napari-tabu', 'napari-time-slicer', 'napari-tools-menu', 'napari-workflow-inspector', 'napari-workflow-optimizer', 'napari-workflows', 'numpy >=1.21.4', 'platymatch', 'python >=3.7', 'redlionfish', 'the-segmentation-game', 'vispy <=0.9.6']",BSD-3-Clause,1656288869629.0,2022-06-27 00:18:43.842000+00:00,bbda2ff8cc91d7fd0b2ee818bd7eefc7,None,11859.0,conda-forge/devbio-napari/0.5.8/noarch/devbio-napari-0.5.8-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/devbio-napari/0.5.8/noarch/devbio-napari-0.5.8-pyhd8ed1ab_0.tar.bz2,conda,0.5.8,conda-forge,['main'],conda,noarch/devbio-napari-0.5.9-pyhd8ed1ab_0.tar.bz2,None-any-None,True,noarch,pyhd8ed1ab_0,0.0,"['cellpose-napari', 'jupyterlab', 'napari <=0.4.15', 'napari-3d-ortho-viewer', 'napari-accelerated-pixel-and-object-classification', 'napari-animation', 'napari-blob-detection', 'napari-brightness-contrast', 'napari-clusters-plotter', 'napari-crop', 'napari-curtain', 'napari-folder-browser', 'napari-layer-details-display', 'napari-mouse-controls', 'napari-plot-profile', 'napari-plugin-engine >=0.1.4', 'napari-plugin-search', 'napari-pyclesperanto-assistant', 'napari-segment-blobs-and-things-with-membranes', 'napari-simpleitk-image-processing', 'napari-skimage-regionprops', 'napari-tabu', 'napari-time-slicer', 'napari-tools-menu', 'napari-workflow-inspector', 'napari-workflow-optimizer', 'napari-workflows', 'numpy >=1.21.4', 'platymatch', 'python >=3.7', 'redlionfish', 'the-segmentation-game', 'vispy <=0.9.6']",BSD-3-Clause,1657479430440.0,2022-07-10 19:01:01.966000+00:00,ce9d2a6e3fc3e5b9918a5220fd5dad90,None,11887.0,conda-forge/devbio-napari/0.5.9/noarch/devbio-napari-0.5.9-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/devbio-napari/0.5.9/noarch/devbio-napari-0.5.9-pyhd8ed1ab_0.tar.bz2,conda,0.5.9,conda-forge,['main'],conda,noarch/devbio-napari-0.5.9-pyhd8ed1ab_1.tar.bz2,None-any-None,True,noarch,pyhd8ed1ab_1,1.0,"['cellpose-napari', 'jupyterlab', 'napari <=0.4.15', 'napari-3d-ortho-viewer', 'napari-accelerated-pixel-and-object-classification', 'napari-animation', 'napari-blob-detection', 'napari-brightness-contrast', 'napari-clusters-plotter', 'napari-crop', 'napari-curtain', 'napari-czifile2', 'napari-folder-browser', 'napari-layer-details-display', 'napari-mouse-controls', 'napari-plot-profile', 'napari-plugin-engine >=0.1.4', 'napari-plugin-search', 'napari-pyclesperanto-assistant', 'napari-segment-blobs-and-things-with-membranes', 'napari-simpleitk-image-processing', 'napari-skimage-regionprops', 'napari-tabu', 'napari-time-slicer', 'napari-tools-menu', 'napari-workflow-inspector', 'napari-workflow-optimizer', 'napari-workflows', 'numpy >=1.21.4', 'platymatch', 'python >=3.7', 'redlionfish', 'the-segmentation-game', 'vispy <=0.9.6']",BSD-3-Clause,1658251939113.0,2022-07-19 17:36:37.314000+00:00,b1de6fa045300351658884c80a1d6f8d,None,11896.0,conda-forge/devbio-napari/0.5.9/noarch/devbio-napari-0.5.9-pyhd8ed1ab_1.tar.bz2,//api.anaconda.org/download/conda-forge/devbio-napari/0.5.9/noarch/devbio-napari-0.5.9-pyhd8ed1ab_1.tar.bz2,conda,0.5.9,conda-forge,['main'],,, -29,disease-classifier,0.0.1,Disease classifier,A disease classifier based on iPAC images.,Chenqi Zhang,BSD-3-Clause,https://github.com/zcqwh/disease-classifier,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,disease-classifier.make_qwidget,iPAC disease classifier,disease_classifier._widget:Disease_classifier,,,,2.1,disease-classifier,0.0.1,,A disease classifier based on iPAC images.,"# disease-classifier +",text/markdown,https://github.com/haesleinhuepf/devbio-napari,Robert Haase,robert.haase@uni-leipzig.de,BSD-3,"['Development Status :: 3 - Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine>=0.1.4', 'npe2', 'numpy>=1.21.4', 'napari-assistant>=0.4.9', 'napari-pyclesperanto-assistant>=0.23.0', 'napari-skimage-regionprops', 'napari-animation', 'PlatyMatch', 'napari-plot-profile', 'napari-accelerated-pixel-and-object-classification', 'napari-brightness-contrast', 'napari-plugin-search', 'napari-segment-blobs-and-things-with-membranes', 'napari-simpleitk-image-processing', 'napari-stl-exporter', 'napari-folder-browser', 'napari-crop', 'napari-clusters-plotter>=0.7.1', 'napari-tabu', 'napari-workflow-optimizer', 'napari-workflow-inspector', 'napari-curtain', 'napari-layer-details-display', 'napari', 'vispy', 'napari-mouse-controls', 'the-segmentation-game', 'napari-blob-detection', 'jupyterlab', 'napari-czifile2', 'napari-roi', 'pydantic!=1.10.0', 'napari-pystackreg', 'imageio!=2.22.1', 'redlionfish', 'jupyter-server', 'seaborn']",>=3.9,"['Bug Tracker, https://github.com/haesleinhuepf/devbio-napari/issues', 'Documentation, https://github.com/haesleinhuepf/devbio-napari#README.md', 'Source Code, https://github.com/haesleinhuepf/devbio-napari', 'User Support, https://github.com/haesleinhuepf/devbio-napari/issues']",,True,0.4.0,conda-forge/devbio-napari/0.4.0,0.5.0,conda-forge/devbio-napari/0.5.0,0.5.2,conda-forge/devbio-napari/0.5.2,conda,noarch/devbio-napari-0.4.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,True,python,"['napari-3d-ortho-viewer', 'napari-accelerated-pixel-and-object-classification', 'napari-aicsimageio', 'napari-animation', 'napari-brightness-contrast', 'napari-clusters-plotter', 'napari-crop', 'napari-curtain', 'napari-folder-browser', 'napari-itk-io', 'napari-ome-zarr', 'napari-plot-profile', 'napari-plugin-engine >=0.1.4', 'napari-plugin-search', 'napari-pyclesperanto-assistant', 'napari-segment-blobs-and-things-with-membranes', 'napari-simpleitk-image-processing', 'napari-skimage-regionprops', 'napari-tabu', 'napari-tools-menu', 'napari-workflow-optimizer', 'numpy >=1.21.4', 'platymatch', 'python >=3.7', 'redlionfish']",pyhd8ed1ab_0,1649781008806.0,None-any-None,noarch,2022-04-12 16:34:51.753000+00:00,e88da1b7691533750efdbe0fb1f6bc9d,None,10522.0,conda-forge/devbio-napari/0.4.0/noarch/devbio-napari-0.4.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/devbio-napari/0.4.0/noarch/devbio-napari-0.4.0-pyhd8ed1ab_0.tar.bz2,conda,0.4.0,conda-forge,['main'],conda,noarch/devbio-napari-0.5.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,True,python,"['napari-3d-ortho-viewer', 'napari-accelerated-pixel-and-object-classification', 'napari-aicsimageio', 'napari-animation', 'napari-brightness-contrast', 'napari-clusters-plotter', 'napari-crop', 'napari-curtain', 'napari-folder-browser', 'napari-itk-io', 'napari-ome-zarr', 'napari-plot-profile', 'napari-plugin-engine >=0.1.4', 'napari-plugin-search', 'napari-pyclesperanto-assistant', 'napari-segment-blobs-and-things-with-membranes', 'napari-simpleitk-image-processing', 'napari-skimage-regionprops', 'napari-tabu', 'napari-tools-menu', 'napari-workflow-optimizer', 'numpy >=1.21.4', 'platymatch', 'python >=3.7', 'redlionfish']",noarch,1650583416020.0,None-any-None,pyhd8ed1ab_0,2022-04-21 23:27:52.946000+00:00,cc716d0f5b4fe5bd9d452f457fc647d8,None,10935.0,conda-forge/devbio-napari/0.5.0/noarch/devbio-napari-0.5.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/devbio-napari/0.5.0/noarch/devbio-napari-0.5.0-pyhd8ed1ab_0.tar.bz2,conda,0.5.0,conda-forge,['main'],conda,noarch/devbio-napari-0.5.0-pyhd8ed1ab_1.tar.bz2,None-any-None,True,noarch,pyhd8ed1ab_1,1.0,"['napari-3d-ortho-viewer', 'napari-accelerated-pixel-and-object-classification', 'napari-animation', 'napari-brightness-contrast', 'napari-clusters-plotter', 'napari-crop', 'napari-curtain', 'napari-folder-browser', 'napari-layer-details-display', 'napari-plot-profile', 'napari-plugin-engine >=0.1.4', 'napari-plugin-search', 'napari-pyclesperanto-assistant', 'napari-segment-blobs-and-things-with-membranes', 'napari-simpleitk-image-processing', 'napari-skimage-regionprops', 'napari-tabu', 'napari-tools-menu', 'napari-workflow-optimizer', 'numpy >=1.21.4', 'platymatch', 'python >=3.7', 'redlionfish']",BSD-3-Clause,python,1650628892426.0,2022-04-22 12:05:59.144000+00:00,ce9e515e441e6bc1666b5d8834e2d984,None,10914.0,conda-forge/devbio-napari/0.5.0/noarch/devbio-napari-0.5.0-pyhd8ed1ab_1.tar.bz2,//api.anaconda.org/download/conda-forge/devbio-napari/0.5.0/noarch/devbio-napari-0.5.0-pyhd8ed1ab_1.tar.bz2,conda,0.5.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,0.5.3,conda-forge/devbio-napari/0.5.3,0.5.4,conda-forge/devbio-napari/0.5.4,0.5.5,conda-forge/devbio-napari/0.5.5,conda,noarch/devbio-napari-0.5.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,True,python,"['napari-3d-ortho-viewer', 'napari-accelerated-pixel-and-object-classification', 'napari-animation', 'napari-brightness-contrast', 'napari-clusters-plotter', 'napari-crop', 'napari-curtain', 'napari-folder-browser', 'napari-layer-details-display', 'napari-plot-profile', 'napari-plugin-engine >=0.1.4', 'napari-plugin-search', 'napari-pyclesperanto-assistant', 'napari-segment-blobs-and-things-with-membranes', 'napari-simpleitk-image-processing', 'napari-skimage-regionprops', 'napari-tabu', 'napari-tools-menu', 'napari-workflow-optimizer', 'numpy >=1.21.4', 'platymatch', 'python >=3.7', 'redlionfish']",noarch,1650648440322.0,None-any-None,pyhd8ed1ab_0,2022-04-22 17:31:19.156000+00:00,f8e11249545be457d31bb638cae31eba,None,10883.0,conda-forge/devbio-napari/0.5.2/noarch/devbio-napari-0.5.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/devbio-napari/0.5.2/noarch/devbio-napari-0.5.2-pyhd8ed1ab_0.tar.bz2,conda,0.5.2,conda-forge,['main'],conda,noarch/devbio-napari-0.5.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,True,python,"['napari-3d-ortho-viewer', 'napari-accelerated-pixel-and-object-classification', 'napari-animation', 'napari-brightness-contrast', 'napari-clusters-plotter', 'napari-crop', 'napari-curtain', 'napari-folder-browser', 'napari-layer-details-display', 'napari-plot-profile', 'napari-plugin-engine >=0.1.4', 'napari-plugin-search', 'napari-pyclesperanto-assistant', 'napari-segment-blobs-and-things-with-membranes', 'napari-simpleitk-image-processing', 'napari-skimage-regionprops', 'napari-tabu', 'napari-tools-menu', 'napari-workflow-optimizer', 'numpy >=1.21.4', 'platymatch', 'python >=3.7', 'redlionfish', 'vispy <=0.9.6']",noarch,1650812906880.0,None-any-None,pyhd8ed1ab_0,2022-04-24 15:12:45.383000+00:00,52fd20e8ca676a39d4ac55a7c148490a,None,10912.0,conda-forge/devbio-napari/0.5.3/noarch/devbio-napari-0.5.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/devbio-napari/0.5.3/noarch/devbio-napari-0.5.3-pyhd8ed1ab_0.tar.bz2,conda,0.5.3,conda-forge,['main'],conda,noarch/devbio-napari-0.5.4-pyhd8ed1ab_0.tar.bz2,None-any-None,True,noarch,pyhd8ed1ab_0,0.0,"['napari-3d-ortho-viewer', 'napari-accelerated-pixel-and-object-classification', 'napari-animation', 'napari-brightness-contrast', 'napari-clusters-plotter', 'napari-crop', 'napari-curtain', 'napari-folder-browser', 'napari-layer-details-display', 'napari-plot-profile', 'napari-plugin-engine >=0.1.4', 'napari-plugin-search', 'napari-pyclesperanto-assistant', 'napari-segment-blobs-and-things-with-membranes', 'napari-simpleitk-image-processing', 'napari-skimage-regionprops', 'napari-tabu', 'napari-tools-menu', 'napari-workflow-inspector', 'napari-workflow-optimizer', 'numpy >=1.21.4', 'platymatch', 'python >=3.7', 'redlionfish', 'vispy <=0.9.6']",BSD-3-Clause,python,1652510625979.0,2022-05-14 06:47:04.544000+00:00,d58e13f05c7afcd7422584592157532f,None,10937.0,conda-forge/devbio-napari/0.5.4/noarch/devbio-napari-0.5.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/devbio-napari/0.5.4/noarch/devbio-napari-0.5.4-pyhd8ed1ab_0.tar.bz2,conda,0.5.4,conda-forge,['main'],,,,,,,0.5.6,conda-forge/devbio-napari/0.5.6,0.5.7,conda-forge/devbio-napari/0.5.7,conda,noarch/devbio-napari-0.5.5-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,True,python,"['napari-3d-ortho-viewer', 'napari-accelerated-pixel-and-object-classification', 'napari-animation', 'napari-brightness-contrast', 'napari-clusters-plotter', 'napari-crop', 'napari-curtain', 'napari-folder-browser', 'napari-layer-details-display', 'napari-plot-profile', 'napari-plugin-engine >=0.1.4', 'napari-plugin-search', 'napari-pyclesperanto-assistant', 'napari-segment-blobs-and-things-with-membranes', 'napari-simpleitk-image-processing', 'napari-skimage-regionprops', 'napari-tabu', 'napari-tools-menu', 'napari-workflow-inspector', 'napari-workflow-optimizer', 'numpy >=1.21.4', 'platymatch', 'python >=3.7', 'redlionfish', 'vispy <=0.9.6']",noarch,1654378221407.0,None-any-None,pyhd8ed1ab_0,2022-06-04 21:35:00.538000+00:00,194ba2a97a5876167b22555b4be828e5,None,11137.0,conda-forge/devbio-napari/0.5.5/noarch/devbio-napari-0.5.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/devbio-napari/0.5.5/noarch/devbio-napari-0.5.5-pyhd8ed1ab_0.tar.bz2,conda,0.5.5,conda-forge,['main'],conda,noarch/devbio-napari-0.5.6-pyhd8ed1ab_0.tar.bz2,None-any-None,True,noarch,pyhd8ed1ab_0,0.0,"['napari <=0.4.15', 'napari-3d-ortho-viewer', 'napari-accelerated-pixel-and-object-classification', 'napari-animation', 'napari-blob-detection', 'napari-brightness-contrast', 'napari-clusters-plotter', 'napari-crop', 'napari-curtain', 'napari-folder-browser', 'napari-layer-details-display', 'napari-mouse-controls', 'napari-plot-profile', 'napari-plugin-engine >=0.1.4', 'napari-plugin-search', 'napari-pyclesperanto-assistant', 'napari-segment-blobs-and-things-with-membranes', 'napari-simpleitk-image-processing', 'napari-skimage-regionprops', 'napari-tabu', 'napari-time-slicer', 'napari-tools-menu', 'napari-workflow-inspector', 'napari-workflow-optimizer', 'napari-workflows', 'numpy >=1.21.4', 'platymatch', 'python >=3.7', 'redlionfish', 'the-segmentation-game', 'vispy <=0.9.6']",BSD-3-Clause,python,1655421087319.0,2022-06-16 23:14:56.026000+00:00,48ac1fdf9789a3a1354725f673a065e9,None,11642.0,conda-forge/devbio-napari/0.5.6/noarch/devbio-napari-0.5.6-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/devbio-napari/0.5.6/noarch/devbio-napari-0.5.6-pyhd8ed1ab_0.tar.bz2,conda,0.5.6,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,conda,noarch/devbio-napari-0.5.7-pyhd8ed1ab_0.tar.bz2,None-any-None,True,noarch,pyhd8ed1ab_0,0.0,"['cellpose-napari', 'jupyterlab', 'napari <=0.4.15', 'napari-3d-ortho-viewer', 'napari-accelerated-pixel-and-object-classification', 'napari-animation', 'napari-blob-detection', 'napari-brightness-contrast', 'napari-clusters-plotter', 'napari-crop', 'napari-curtain', 'napari-folder-browser', 'napari-layer-details-display', 'napari-mouse-controls', 'napari-plot-profile', 'napari-plugin-engine >=0.1.4', 'napari-plugin-search', 'napari-pyclesperanto-assistant', 'napari-segment-blobs-and-things-with-membranes', 'napari-simpleitk-image-processing', 'napari-skimage-regionprops', 'napari-tabu', 'napari-time-slicer', 'napari-tools-menu', 'napari-workflow-inspector', 'napari-workflow-optimizer', 'napari-workflows', 'numpy >=1.21.4', 'platymatch', 'python >=3.7', 'redlionfish', 'the-segmentation-game', 'vispy <=0.9.6']",BSD-3-Clause,python,1655555738447.0,2022-06-18 12:40:39.440000+00:00,d163acef93807f8fbabab8162395c570,None,11648.0,conda-forge/devbio-napari/0.5.7/noarch/devbio-napari-0.5.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/devbio-napari/0.5.7/noarch/devbio-napari-0.5.7-pyhd8ed1ab_0.tar.bz2,conda,0.5.7,conda-forge,['main'],conda,noarch/devbio-napari-0.5.8-pyhd8ed1ab_0.tar.bz2,None-any-None,True,noarch,pyhd8ed1ab_0,0.0,"['cellpose-napari', 'jupyterlab', 'napari <=0.4.15', 'napari-3d-ortho-viewer', 'napari-accelerated-pixel-and-object-classification', 'napari-animation', 'napari-blob-detection', 'napari-brightness-contrast', 'napari-clusters-plotter', 'napari-crop', 'napari-curtain', 'napari-folder-browser', 'napari-layer-details-display', 'napari-mouse-controls', 'napari-plot-profile', 'napari-plugin-engine >=0.1.4', 'napari-plugin-search', 'napari-pyclesperanto-assistant', 'napari-segment-blobs-and-things-with-membranes', 'napari-simpleitk-image-processing', 'napari-skimage-regionprops', 'napari-tabu', 'napari-time-slicer', 'napari-tools-menu', 'napari-workflow-inspector', 'napari-workflow-optimizer', 'napari-workflows', 'numpy >=1.21.4', 'platymatch', 'python >=3.7', 'redlionfish', 'the-segmentation-game', 'vispy <=0.9.6']",BSD-3-Clause,python,1656288869629.0,2022-06-27 00:18:43.842000+00:00,bbda2ff8cc91d7fd0b2ee818bd7eefc7,None,11859.0,conda-forge/devbio-napari/0.5.8/noarch/devbio-napari-0.5.8-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/devbio-napari/0.5.8/noarch/devbio-napari-0.5.8-pyhd8ed1ab_0.tar.bz2,conda,0.5.8,conda-forge,['main'],0.5.8,conda-forge/devbio-napari/0.5.8,conda,noarch/devbio-napari-0.5.9-pyhd8ed1ab_0.tar.bz2,None-any-None,True,noarch,pyhd8ed1ab_0,0.0,"['cellpose-napari', 'jupyterlab', 'napari <=0.4.15', 'napari-3d-ortho-viewer', 'napari-accelerated-pixel-and-object-classification', 'napari-animation', 'napari-blob-detection', 'napari-brightness-contrast', 'napari-clusters-plotter', 'napari-crop', 'napari-curtain', 'napari-folder-browser', 'napari-layer-details-display', 'napari-mouse-controls', 'napari-plot-profile', 'napari-plugin-engine >=0.1.4', 'napari-plugin-search', 'napari-pyclesperanto-assistant', 'napari-segment-blobs-and-things-with-membranes', 'napari-simpleitk-image-processing', 'napari-skimage-regionprops', 'napari-tabu', 'napari-time-slicer', 'napari-tools-menu', 'napari-workflow-inspector', 'napari-workflow-optimizer', 'napari-workflows', 'numpy >=1.21.4', 'platymatch', 'python >=3.7', 'redlionfish', 'the-segmentation-game', 'vispy <=0.9.6']",BSD-3-Clause,1657479430440.0,2022-07-10 19:01:01.966000+00:00,ce9d2a6e3fc3e5b9918a5220fd5dad90,None,11887.0,conda-forge/devbio-napari/0.5.9/noarch/devbio-napari-0.5.9-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/devbio-napari/0.5.9/noarch/devbio-napari-0.5.9-pyhd8ed1ab_0.tar.bz2,conda,0.5.9,conda-forge,['main'],0.5.9,conda-forge/devbio-napari/0.5.9,conda,noarch/devbio-napari-0.5.9-pyhd8ed1ab_1.tar.bz2,None-any-None,True,noarch,pyhd8ed1ab_1,1.0,"['cellpose-napari', 'jupyterlab', 'napari <=0.4.15', 'napari-3d-ortho-viewer', 'napari-accelerated-pixel-and-object-classification', 'napari-animation', 'napari-blob-detection', 'napari-brightness-contrast', 'napari-clusters-plotter', 'napari-crop', 'napari-curtain', 'napari-czifile2', 'napari-folder-browser', 'napari-layer-details-display', 'napari-mouse-controls', 'napari-plot-profile', 'napari-plugin-engine >=0.1.4', 'napari-plugin-search', 'napari-pyclesperanto-assistant', 'napari-segment-blobs-and-things-with-membranes', 'napari-simpleitk-image-processing', 'napari-skimage-regionprops', 'napari-tabu', 'napari-time-slicer', 'napari-tools-menu', 'napari-workflow-inspector', 'napari-workflow-optimizer', 'napari-workflows', 'numpy >=1.21.4', 'platymatch', 'python >=3.7', 'redlionfish', 'the-segmentation-game', 'vispy <=0.9.6']",BSD-3-Clause,1658251939113.0,2022-07-19 17:36:37.314000+00:00,b1de6fa045300351658884c80a1d6f8d,None,11896.0,conda-forge/devbio-napari/0.5.9/noarch/devbio-napari-0.5.9-pyhd8ed1ab_1.tar.bz2,//api.anaconda.org/download/conda-forge/devbio-napari/0.5.9/noarch/devbio-napari-0.5.9-pyhd8ed1ab_1.tar.bz2,conda,0.5.9,conda-forge,['main'],conda,noarch/devbio-napari-0.5.10-pyhd8ed1ab_0.tar.bz2,None-any-None,True,noarch,pyhd8ed1ab_0,0.0,"['cellpose-napari', 'jupyterlab', 'napari <=0.4.15', 'napari-3d-ortho-viewer', 'napari-accelerated-pixel-and-object-classification', 'napari-animation', 'napari-blob-detection', 'napari-brightness-contrast', 'napari-clusters-plotter', 'napari-crop', 'napari-curtain', 'napari-czifile2', 'napari-folder-browser', 'napari-layer-details-display', 'napari-mouse-controls', 'napari-plot-profile', 'napari-plugin-engine >=0.1.4', 'napari-plugin-search', 'napari-pyclesperanto-assistant', 'napari-segment-blobs-and-things-with-membranes', 'napari-simpleitk-image-processing', 'napari-skimage-regionprops', 'napari-tabu', 'napari-time-slicer', 'napari-tools-menu', 'napari-workflow-inspector', 'napari-workflow-optimizer', 'napari-workflows', 'numpy >=1.21.4', 'platymatch', 'python >=3.7', 'redlionfish', 'the-segmentation-game', 'vispy <=0.9.6']",BSD-3-Clause,2022-08-20 15:25:02.143000+00:00,0a159dc4cccbbcab95016a103437c86c,None,12032.0,conda-forge/devbio-napari/0.5.10/noarch/devbio-napari-0.5.10-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/devbio-napari/0.5.10/noarch/devbio-napari-0.5.10-pyhd8ed1ab_0.tar.bz2,conda,0.5.10,conda-forge,['main'],,, +33,disease-classifier,0.0.1,Disease classifier,A disease classifier based on iPAC images.,Chenqi Zhang,BSD-3-Clause,https://github.com/zcqwh/disease-classifier,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,disease-classifier.make_qwidget,iPAC disease classifier,disease_classifier._widget:Disease_classifier,,,,2.1,disease-classifier,0.0.1,,A disease classifier based on iPAC images.,"# disease-classifier [![License](https://img.shields.io/pypi/l/disease-classifier.svg?color=green)](https://github.com/zcqwh/disease-classifier/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/disease-classifier.svg?color=green)](https://pypi.org/project/disease-classifier) @@ -3020,8 +3544,8 @@ https://napari.org/plugins/stable/index.html [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/zcqwh/disease-classifier,Chenqi Zhang,cqzhang@g.ecc.u-tokyo.ac.jp,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['numpy', 'magicgui', 'qtpy', 'matplotlib', 'h5py (>=3.6.0)', 'napari (>=0.4.15)', 'numpy (>=1.22.4)', 'opencv-contrib-python-headless (>=4.5.5.64)', 'pytranskit (>=0.2.3)', 'statsmodels (>=0.13.2)', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/zcqwh/disease-classifier/issues', 'Documentation, https://github.com/zcqwh/disease-classifier#README.md', 'Source Code, https://github.com/zcqwh/disease-classifier', 'User Support, https://github.com/zcqwh/disease-classifier/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,disease-classifier.make_qwidget,iPAC disease classifier,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -30,domb-napari,0.3.0,domb-napari,napari plugin for analyzing fluorescence-labeled proteins redistribution,Borys Olifirov,MIT,,657381709fbae51bc8e3de3f,['conda'],,https://pypi.org/project/domb-napari,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/domb-napari,http://api.anaconda.org/packages/conda-forge/domb-napari,http://anaconda.org/conda-forge/domb-napari,"['2023.11.10', '0.2.0']",2023.11.10,2023.11.10,['noarch'],6.0,https://github.com/wisstock/domb-napari,['pyh9208f05_0'],2023.11.10,conda-forge/domb-napari/2023.11.10,1.0,0.0,2023-12-08 20:49:49.735000+00:00,2024-07-11 11:15:09.821000+00:00,conda,noarch/domb-napari-2023.11.10-pyh9208f05_0.conda,0.0,MIT,False,python,"['domb', 'napari', 'python >=3.9']",noarch,1702068378850.0,None-any-None,pyh9208f05_0,2023-12-08 20:49:50.217000+00:00,1741260d62a9ff9bb4580b87ffcb2319,17324007b8663a2cbf38e5660a3c3fda0b278cdd52076baf69d9bb73a0b14604,14443.0,conda-forge/domb-napari/2023.11.10/noarch/domb-napari-2023.11.10-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/domb-napari/2023.11.10/noarch/domb-napari-2023.11.10-pyh9208f05_0.conda,conda,2023.11.10,conda-forge,"['main', 'broken']",public,,0.2.1,domb-napari.split_channels_widget,Multichannel stack preprocessing,domb_napari._widget:split_channels,,,,2.1,domb-napari,0.3.0,,napari plugin for analyzing fluorescence-labeled proteins redistribution,"domb-napari +",text/markdown,https://github.com/zcqwh/disease-classifier,Chenqi Zhang,cqzhang@g.ecc.u-tokyo.ac.jp,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['numpy', 'magicgui', 'qtpy', 'matplotlib', 'h5py (>=3.6.0)', 'napari (>=0.4.15)', 'numpy (>=1.22.4)', 'opencv-contrib-python-headless (>=4.5.5.64)', 'pytranskit (>=0.2.3)', 'statsmodels (>=0.13.2)', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/zcqwh/disease-classifier/issues', 'Documentation, https://github.com/zcqwh/disease-classifier#README.md', 'Source Code, https://github.com/zcqwh/disease-classifier', 'User Support, https://github.com/zcqwh/disease-classifier/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,disease-classifier.make_qwidget,iPAC disease classifier,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +34,domb-napari,0.3.0,domb-napari,napari plugin for analyzing fluorescence-labeled proteins redistribution,Borys Olifirov,MIT,,657381709fbae51bc8e3de3f,['conda'],,https://pypi.org/project/domb-napari,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/domb-napari,http://api.anaconda.org/packages/conda-forge/domb-napari,http://anaconda.org/conda-forge/domb-napari,"['2023.11.10', '0.2.0']",2023.11.10,2023.11.10,['noarch'],6.0,https://github.com/wisstock/domb-napari,['pyh9208f05_0'],2023.11.10,conda-forge/domb-napari/2023.11.10,1.0,0.0,2023-12-08 20:49:49.735000+00:00,2024-07-11 11:15:09.821000+00:00,conda,noarch/domb-napari-2023.11.10-pyh9208f05_0.conda,0.0,MIT,False,python,"['domb', 'napari', 'python >=3.9']",noarch,1702068378850.0,None-any-None,pyh9208f05_0,2023-12-08 20:49:50.217000+00:00,1741260d62a9ff9bb4580b87ffcb2319,17324007b8663a2cbf38e5660a3c3fda0b278cdd52076baf69d9bb73a0b14604,14443.0,conda-forge/domb-napari/2023.11.10/noarch/domb-napari-2023.11.10-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/domb-napari/2023.11.10/noarch/domb-napari-2023.11.10-pyh9208f05_0.conda,conda,2023.11.10,conda-forge,"['main', 'broken']",public,,0.2.1,domb-napari.split_channels_widget,Multichannel stack preprocessing,domb_napari._widget:split_channels,,,,2.1,domb-napari,0.3.0,,napari plugin for analyzing fluorescence-labeled proteins redistribution,"domb-napari =========== [![Stand With Ukraine](https://raw.githubusercontent.com/vshymanskyy/StandWithUkraine/main/banner-direct-single.svg)](https://stand-with-ukraine.pp.ua) @@ -3248,8 +3772,8 @@ The `stat method` allows for the estimation of intensity and associated errors t Absolute intensity | ![](https://raw.githubusercontent.com/wisstock/domb-napari/master/images/stat_lab_abs.png) :-------------------------:|:-------------------------: __ΔF/F0__|![](https://raw.githubusercontent.com/wisstock/domb-napari/master/images/stat_lab_df.png) -",text/markdown,,Borys Olifirov,omnia.fatum@gmail.com,MIT,"['Framework :: napari', 'Development Status :: 3 - Alpha', 'License :: OSI Approved :: MIT License', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Operating System :: OS Independent', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Image Recognition', 'Topic :: Utilities']","['napari', 'domb', 'dipy']",>=3.8,"['Documentation, https://domb.bio/', 'Source Code, https://github.com/wisstock/domb-napari', 'Bug Tracker, https://github.com/wisstock/domb-napari/issues', 'User Support, https://github.com/wisstock/domb-napari/issues']",,False,0.2.0,conda-forge/domb-napari/0.2.0,,,,,conda,noarch/domb-napari-0.2.0-pyh9208f05_0.conda,0.0,MIT,False,python,"['dipy', 'domb', 'matplotlib-base', 'napari', 'numpy', 'plotly', 'python >=3.8', 'scikit-image', 'scipy', 'vispy']",pyh9208f05_0,1720696343879.0,None-any-None,noarch,2024-07-11 11:15:08.271000+00:00,75000981ffe6538a4255884232ba9327,defcdf9f337aa295a5ac5241cf8f420d27de435ce8d7854ad32d81b1c25d0f74,18501.0,conda-forge/domb-napari/0.2.0/noarch/domb-napari-0.2.0-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/domb-napari/0.2.0/noarch/domb-napari-0.2.0-pyh9208f05_0.conda,conda,0.2.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,domb-napari.dw_registration_widget,Dual-view stack registration,domb_napari._widget:dw_registration,domb-napari.split_sep_widget,SEP image preprocessing,domb_napari._widget:split_sep,domb-napari.e_app_widget,E-FRET estimation,domb_napari._widget:e_app_calc,domb-napari.dw_registration_widget,Dual-view stack registration,False,domb-napari.split_channels_widget,Multichannel stack preprocessing,False,domb-napari.der_series_widget,Red-green series,False,domb-napari.e_app_widget,E-FRET estimation,False,domb-napari.der_series_widget,Red-green series,domb_napari._widget:der_series,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,domb-napari.up_mask_calc_widget,Up masking,domb_napari._widget:up_mask_calc,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,domb-napari.mask_calc_widget,Intensity masking,domb_napari._widget:mask_calc,domb-napari.labels_profiles_set_widget,ROIs profiles,domb_napari._widget:labels_profile_line,domb-napari.labels_multi_profile_widget,Multiple img stat profiles,domb_napari._widget:labels_multi_profile_stat,domb-napari.multi_labels_profile_widget,Multiple labels stat profiles,domb_napari._widget:multi_labels_profile_stat,domb-napari.dot_mask_widget,Dot-patterns masking,domb_napari._widget:dot_mask_calc,,,,,domb-napari.split_sep_widget,SEP preprocessing,False,domb-napari.dot_mask_widget,Dot-patterns masking,False,domb-napari.up_mask_calc_widget,Up masking,False,domb-napari.mask_calc_widget,Intensity masking,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -31,elastix-napari,0.2.1,elastix-napari,A toolbox for rigid and nonrigid registration of images.,Viktor van der Valk,Apache Software License 2.0,https://github.com/SuperElastix/elastix-napari,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.0,elastix-napari.elastix_registration,Create elastix_registration,elastix_napari.elastix_registration:elastix_registration,,,,2.1,elastix-napari,0.2.1,,A toolbox for rigid and nonrigid registration of images.,"# elastix-napari +",text/markdown,,Borys Olifirov,omnia.fatum@gmail.com,MIT,"['Framework :: napari', 'Development Status :: 3 - Alpha', 'License :: OSI Approved :: MIT License', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Operating System :: OS Independent', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Image Recognition', 'Topic :: Utilities']","['napari', 'domb', 'dipy']",>=3.8,"['Documentation, https://domb.bio/', 'Source Code, https://github.com/wisstock/domb-napari', 'Bug Tracker, https://github.com/wisstock/domb-napari/issues', 'User Support, https://github.com/wisstock/domb-napari/issues']",,False,0.2.0,conda-forge/domb-napari/0.2.0,,,,,conda,noarch/domb-napari-0.2.0-pyh9208f05_0.conda,0.0,MIT,False,python,"['dipy', 'domb', 'matplotlib-base', 'napari', 'numpy', 'plotly', 'python >=3.8', 'scikit-image', 'scipy', 'vispy']",pyh9208f05_0,1720696343879.0,None-any-None,noarch,2024-07-11 11:15:08.271000+00:00,75000981ffe6538a4255884232ba9327,defcdf9f337aa295a5ac5241cf8f420d27de435ce8d7854ad32d81b1c25d0f74,18501.0,conda-forge/domb-napari/0.2.0/noarch/domb-napari-0.2.0-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/domb-napari/0.2.0/noarch/domb-napari-0.2.0-pyh9208f05_0.conda,conda,0.2.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,domb-napari.dw_registration_widget,Dual-view stack registration,domb_napari._widget:dw_registration,domb-napari.split_sep_widget,SEP image preprocessing,domb_napari._widget:split_sep,domb-napari.e_app_widget,E-FRET estimation,domb_napari._widget:e_app_calc,domb-napari.dw_registration_widget,Dual-view stack registration,False,domb-napari.split_channels_widget,Multichannel stack preprocessing,False,domb-napari.der_series_widget,Red-green series,False,domb-napari.e_app_widget,E-FRET estimation,False,domb-napari.der_series_widget,Red-green series,domb_napari._widget:der_series,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,domb-napari.up_mask_calc_widget,Up masking,domb_napari._widget:up_mask_calc,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,domb-napari.mask_calc_widget,Intensity masking,domb_napari._widget:mask_calc,domb-napari.labels_profiles_set_widget,ROIs profiles,domb_napari._widget:labels_profile_line,domb-napari.labels_multi_profile_widget,Multiple img stat profiles,domb_napari._widget:labels_multi_profile_stat,domb-napari.multi_labels_profile_widget,Multiple labels stat profiles,domb_napari._widget:multi_labels_profile_stat,domb-napari.dot_mask_widget,Dot-patterns masking,domb_napari._widget:dot_mask_calc,,domb-napari.split_sep_widget,SEP preprocessing,False,domb-napari.dot_mask_widget,Dot-patterns masking,False,domb-napari.up_mask_calc_widget,Up masking,False,domb-napari.mask_calc_widget,Intensity masking,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +35,elastix-napari,0.2.1,elastix-napari,A toolbox for rigid and nonrigid registration of images.,Viktor van der Valk,Apache Software License 2.0,https://github.com/SuperElastix/elastix-napari,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.0,elastix-napari.elastix_registration,Create elastix_registration,elastix_napari.elastix_registration:elastix_registration,,,,2.1,elastix-napari,0.2.1,,A toolbox for rigid and nonrigid registration of images.,"# elastix-napari [![License](https://img.shields.io/pypi/l/elastix-napari.svg?color=green)](https://github.com/SuperElastix/elastix-napari/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/elastix-napari.svg?color=green)](https://pypi.org/project/elastix-napari) @@ -3301,8 +3825,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [elastix Model Zoo]: https://elastix.lumc.nl/modelzoo/ [Jupyter notebooks]: https://mybinder.org/v2/gh/InsightSoftwareConsortium/ITKElastix/master?urlpath=lab/tree/examples%2FITK_Example01_SimpleRegistration.ipynb [youtube]: https://www.youtube.com/watch?v=GzbP-qUR034 -",text/markdown,https://github.com/SuperElastix/elastix-napari,Viktor van der Valk,v.o.van_der_valk@lumc.nl,Apache Software License 2.0,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: Apache Software License']","['itk-elastix (>=0.11.1)', 'numpy (>=1.19.0)', 'napari[all] (>=0.4.6)', 'napari-plugin-engine (>=0.1.4)', 'magicgui (>=0.4.0)', 'itk-napari-conversion (>=0.3.1)', 'napari-itk-io (>=0.1.0)']",>=3.8,"['Project Site, https://elastix.lumc.nl/', 'Bug Tracker, https://github.com/SuperElastix/elastix-napari/issues', 'Source Code, https://github.com/SuperElastix/elastix-napari', 'User Support, https://groups.google.com/g/elastix-imageregistration']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,elastix-napari.create_transformix_widget,Create transformix widget,elastix_napari.transformix_widget:create_transformix_widget,,,,,,,elastix-napari.elastix_registration,elastix_registration,False,elastix-napari.create_transformix_widget,transformix,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -32,empanada-napari,1.1.1,empanada-napari,Napari plugin of algorithms for Panoptic Segmentation of organelles in EM,"Madeline Barry, Abhishek Bhardwaj, Ryan Conrad",BSD-3-Clause,https://github.com/volume-em/empanada-napari,643da85e61e1ea32f8c4d330,['conda'],,https://github.com/volume-em/empanada-napari,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/empanada-napari,http://api.anaconda.org/packages/conda-forge/empanada-napari,http://anaconda.org/conda-forge/empanada-napari,"['0.2.0', '0.2.3']",0.2.3,0.2.3,['noarch'],4.0,,['pyhd8ed1ab_0'],0.2.0,conda-forge/empanada-napari/0.2.0,1.0,0.0,2023-04-17 20:13:15.087000+00:00,2023-06-18 17:28:02.315000+00:00,conda,noarch/empanada-napari-0.2.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['empanada-dl >=0.1.4', 'imagecodecs', 'napari >=0.4.13', 'napari-plugin-engine >=0.1.4', 'python >=3.7', 'scikit-image >=0.18']",noarch,1681762201941.0,None-any-None,pyhd8ed1ab_0,2023-04-17 20:13:15.555000+00:00,b75015b5f0e2fe10a245347890dc507c,5447e6608b8467496174821a0d8b5f8970dbe6452175deba88bc9bf612727e2c,57716.0,conda-forge/empanada-napari/0.2.0/noarch/empanada-napari-0.2.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/empanada-napari/0.2.0/noarch/empanada-napari-0.2.0-pyhd8ed1ab_0.conda,conda,0.2.0,conda-forge,['main'],public,,0.1.0,empanada-napari.test_widget,Create 2D Inference (Parameter Testing),empanada_napari._slice_inference:test_widget,,,,2.1,empanada-napari,1.1.1,,Napari plugin of algorithms for Panoptic Segmentation of organelles in EM,"# empanada-napari +",text/markdown,https://github.com/SuperElastix/elastix-napari,Viktor van der Valk,v.o.van_der_valk@lumc.nl,Apache Software License 2.0,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: Apache Software License']","['itk-elastix (>=0.11.1)', 'numpy (>=1.19.0)', 'napari[all] (>=0.4.6)', 'napari-plugin-engine (>=0.1.4)', 'magicgui (>=0.4.0)', 'itk-napari-conversion (>=0.3.1)', 'napari-itk-io (>=0.1.0)']",>=3.8,"['Project Site, https://elastix.lumc.nl/', 'Bug Tracker, https://github.com/SuperElastix/elastix-napari/issues', 'Source Code, https://github.com/SuperElastix/elastix-napari', 'User Support, https://groups.google.com/g/elastix-imageregistration']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,elastix-napari.create_transformix_widget,Create transformix widget,elastix_napari.transformix_widget:create_transformix_widget,,,,,,,elastix-napari.elastix_registration,elastix_registration,False,elastix-napari.create_transformix_widget,transformix,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +36,empanada-napari,1.1.1,empanada-napari,Napari plugin of algorithms for Panoptic Segmentation of organelles in EM,"Madeline Barry, Abhishek Bhardwaj, Ryan Conrad",BSD-3-Clause,https://github.com/volume-em/empanada-napari,643da85e61e1ea32f8c4d330,['conda'],,https://github.com/volume-em/empanada-napari,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/empanada-napari,http://api.anaconda.org/packages/conda-forge/empanada-napari,http://anaconda.org/conda-forge/empanada-napari,"['0.2.0', '0.2.3']",0.2.3,0.2.3,['noarch'],4.0,,['pyhd8ed1ab_0'],0.2.0,conda-forge/empanada-napari/0.2.0,1.0,0.0,2023-04-17 20:13:15.087000+00:00,2023-06-18 17:28:02.315000+00:00,conda,noarch/empanada-napari-0.2.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['empanada-dl >=0.1.4', 'imagecodecs', 'napari >=0.4.13', 'napari-plugin-engine >=0.1.4', 'python >=3.7', 'scikit-image >=0.18']",noarch,1681762201941.0,None-any-None,pyhd8ed1ab_0,2023-04-17 20:13:15.555000+00:00,b75015b5f0e2fe10a245347890dc507c,5447e6608b8467496174821a0d8b5f8970dbe6452175deba88bc9bf612727e2c,57716.0,conda-forge/empanada-napari/0.2.0/noarch/empanada-napari-0.2.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/empanada-napari/0.2.0/noarch/empanada-napari-0.2.0-pyhd8ed1ab_0.conda,conda,0.2.0,conda-forge,['main'],public,,0.1.0,empanada-napari.test_widget,Create 2D Inference (Parameter Testing),empanada_napari._slice_inference:test_widget,,,,2.1,empanada-napari,1.1.1,,Napari plugin of algorithms for Panoptic Segmentation of organelles in EM,"# empanada-napari > [!IMPORTANT] > **New Version Announcement!** @@ -3432,8 +3956,49 @@ If you use results generated by this plugin in a publication, please cite: url = {https://doi.org/10.1016/j.cels.2022.12.006} } ``` -",text/markdown,https://github.com/volume-em/empanada-napari,"Madeline Barry, Abhishek Bhardwaj, Ryan Conrad",abhishek.bhardwaj@nih.gov,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['opencv-python ==4.9.0.80', 'opencv-python-headless ==4.9.0.80', 'napari ==0.4.18', 'numpy ==1.22', 'napari-plugin-engine >=0.1.4', 'scikit-image >=0.19', 'empanada-dl >=0.1.7', 'numba ==0.59.0', 'imagecodecs', 'openpyxl', 'imagehash', 'mlflow', 'simpleitk', 'tqdm']",>=3.7,"['Bug Tracker, https://github.com/volume-em/empanada-napari/issues', 'Documentation, https://github.com/volume-em/empanada-napari#README.md', 'Source Code, https://github.com/volume-em/empanada-napari', 'User Support, https://github.com/volume-em/empanada-napari/issues']",,False,0.2.3,conda-forge/empanada-napari/0.2.3,,,,,conda,noarch/empanada-napari-0.2.3-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['empanada-dl >=0.1.7', 'imagecodecs', 'napari >=0.4.16', 'napari-plugin-engine >=0.1.4', 'numpy <1.23.0a0', 'python >=3.7', 'scikit-image >=0.19']",pyhd8ed1ab_0,1682326580607.0,None-any-None,noarch,2023-04-24 08:59:18.556000+00:00,30bfbb85a8151f446d4f3089f36af936,c17654a1f13494dde0c1629742bfcaa1a2eb3dd3c98682742516bda56c96a4e0,62548.0,conda-forge/empanada-napari/0.2.3/noarch/empanada-napari-0.2.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/empanada-napari/0.2.3/noarch/empanada-napari-0.2.3-pyhd8ed1ab_0.conda,conda,0.2.3,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,empanada-napari.volume_inference_widget,Create 3D Inference,empanada_napari._volume_inference:volume_inference_widget,empanada-napari.export_batch_segs,Export Segmentations,empanada_napari._export_batch_segs:export_batch_segs,empanada-napari.label_counter_widget,Count Labels,empanada_napari._label_counter_widget:label_counter_widget,empanada-napari.test_widget,2D Inference (Parameter Testing),False,empanada-napari.volume_inference_widget,3D Inference,False,empanada-napari.export_batch_segs,Export Segmentations,False,empanada-napari.label_counter_widget,Count Labels,False,empanada-napari.merge_labels,Create Merge Labels,empanada_napari._merge_split_widget:merge_labels,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,empanada-napari.delete_labels,Create Delete Labels,empanada_napari._merge_split_widget:delete_labels,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,empanada-napari.morph_labels,Create Morph Labels,empanada_napari._merge_split_widget:morph_labels,empanada-napari.split_labels,Create Split Labels,empanada_napari._merge_split_widget:split_labels,empanada-napari.filter_small_labels,Filter Labels,empanada_napari._filter_small_labels:filter_small_labels,empanada-napari.jump_to_label,Jump to label,empanada_napari._merge_split_widget:jump_to_label,empanada-napari.find_next_available_label,Find next available label,empanada_napari._merge_split_widget:find_next_available_label,empanada-napari.pick_patches,Pick finetune/training patches,empanada_napari._pick_patches:pick_patches,,empanada-napari.merge_labels,Merge Labels,False,empanada-napari.delete_labels,Delete Labels,False,empanada-napari.morph_labels,Morph Labels,False,empanada-napari.split_labels,Split Labels,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -33,epitools,0.0.12,EpiTools,Quantifying 2D cell shape and epithelial tissue dynamics,Yanlan Mao,"BSD 3-Clause Licence +",text/markdown,https://github.com/volume-em/empanada-napari,"Madeline Barry, Abhishek Bhardwaj, Ryan Conrad",abhishek.bhardwaj@nih.gov,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['opencv-python ==4.9.0.80', 'opencv-python-headless ==4.9.0.80', 'napari ==0.4.18', 'numpy ==1.22', 'napari-plugin-engine >=0.1.4', 'scikit-image >=0.19', 'empanada-dl >=0.1.7', 'numba ==0.59.0', 'imagecodecs', 'openpyxl', 'imagehash', 'mlflow', 'simpleitk', 'tqdm']",>=3.7,"['Bug Tracker, https://github.com/volume-em/empanada-napari/issues', 'Documentation, https://github.com/volume-em/empanada-napari#README.md', 'Source Code, https://github.com/volume-em/empanada-napari', 'User Support, https://github.com/volume-em/empanada-napari/issues']",,False,0.2.3,conda-forge/empanada-napari/0.2.3,,,,,conda,noarch/empanada-napari-0.2.3-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['empanada-dl >=0.1.7', 'imagecodecs', 'napari >=0.4.16', 'napari-plugin-engine >=0.1.4', 'numpy <1.23.0a0', 'python >=3.7', 'scikit-image >=0.19']",pyhd8ed1ab_0,1682326580607.0,None-any-None,noarch,2023-04-24 08:59:18.556000+00:00,30bfbb85a8151f446d4f3089f36af936,c17654a1f13494dde0c1629742bfcaa1a2eb3dd3c98682742516bda56c96a4e0,62548.0,conda-forge/empanada-napari/0.2.3/noarch/empanada-napari-0.2.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/empanada-napari/0.2.3/noarch/empanada-napari-0.2.3-pyhd8ed1ab_0.conda,conda,0.2.3,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,empanada-napari.volume_inference_widget,Create 3D Inference,empanada_napari._volume_inference:volume_inference_widget,empanada-napari.export_batch_segs,Export Segmentations,empanada_napari._export_batch_segs:export_batch_segs,empanada-napari.label_counter_widget,Count Labels,empanada_napari._label_counter_widget:label_counter_widget,empanada-napari.test_widget,2D Inference (Parameter Testing),False,empanada-napari.volume_inference_widget,3D Inference,False,empanada-napari.export_batch_segs,Export Segmentations,False,empanada-napari.label_counter_widget,Count Labels,False,empanada-napari.merge_labels,Create Merge Labels,empanada_napari._merge_split_widget:merge_labels,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,empanada-napari.delete_labels,Create Delete Labels,empanada_napari._merge_split_widget:delete_labels,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,empanada-napari.morph_labels,Create Morph Labels,empanada_napari._merge_split_widget:morph_labels,empanada-napari.split_labels,Create Split Labels,empanada_napari._merge_split_widget:split_labels,empanada-napari.filter_small_labels,Filter Labels,empanada_napari._filter_small_labels:filter_small_labels,empanada-napari.jump_to_label,Jump to label,empanada_napari._merge_split_widget:jump_to_label,empanada-napari.find_next_available_label,Find next available label,empanada_napari._merge_split_widget:find_next_available_label,,empanada-napari.merge_labels,Merge Labels,False,empanada-napari.delete_labels,Delete Labels,False,empanada-napari.morph_labels,Morph Labels,False,empanada-napari.split_labels,Split Labels,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +37,epicure,0.1.3,EpiCure,Napari plugin to manually correct epithelia segmentation in movies,Gaëlle Letort,BSD-3-Clause,https://gitlab.pasteur.fr/gletort/epicure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,epicure.start,Start,epicure.start_epicuring:start_epicure,,,,2.1,epicure,0.1.3,,Napari plugin to manually correct epithelia segmentation in movies,"# EpiCure + +[![License BSD-3](https://img.shields.io/pypi/l/epicure.svg?color=green)](https://gitlab.pasteur.fr/gletort/epicure/raw/main/LICENSE) +[![PyPI](https://img.shields.io/pypi/v/epicure.svg?color=green)](https://pypi.org/project/epicure) +[![Python Version](https://img.shields.io/pypi/pyversions/epicure.svg?color=green)](https://python.org) +[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/epicure)](https://napari-hub.org/plugins/epicure) + +Napari plugin to manually correct epithelia segmentation in movies + + > **Documentation in the [wiki](https://gitlab.pasteur.fr/gletort/epicure/-/wikis/EpiCure)** + +## Installation + +### Install plugin +To install EpiCure on a fresh python virtual environment, type inside the environement: +``` +pip install epicure +``` + +Then launch `Napari`, and the plugin should be visible in the `Plugins` list. + +If you already have an environment with `Napari` installed, you can also install it directly in `Napari>Plugins>Install/Uninstall plugins` + +### Install code +To have the code to be able to modify it, clone this repository. You can use `pip install -e .` so that everytime you update the code, the plugin will be updated. + +## Usage + +Refer to the [wiki](https://gitlab.pasteur.fr/gletort/epicure/-/wikis/EpiCure) for documentation of the different steps possible in the pipeline. + + + +This [napari] plugin was initialized with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template. + +[napari]: https://github.com/napari/napari +[Cookiecutter]: https://github.com/audreyr/cookiecutter +[file an issue]: https://github.com/gletort/epicure/issues +[tox]: https://tox.readthedocs.io/en/latest/ +[pip]: https://pypi.org/project/pip/ +[PyPI]: https://pypi.org/ +",text/markdown,https://gitlab.pasteur.fr/gletort/epicure,Gaëlle Letort,,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['napari<=0.4.19', 'numpy', 'magicgui', 'qtpy', 'scikit-image', 'opencv-python-headless', 'roifile', 'xlsxwriter', 'laptrack', 'matplotlib', 'imagecodecs', 'edt', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.8,"['Bug Tracker, https://gitlab.pasteur.fr/gletort/epicure/issues', 'Documentation, https://gitlab.pasteur.fr/gletort/epicure#README.md', 'Source Code, https://gitlab.pasteur.fr/gletort/epicure', 'User Support, https://gitlab.pasteur.fr/gletort/epicure/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation']",epicure.concatenate,Concatenate,epicure.concatenate_movie:concatenate_movies,epicure.doc,Documentation,epicure.Utils:show_documentation,,,,epicure.start,Start EpiCure,False,epicure.concatenate,Concatenate EpiCured movies,False,epicure.doc,Open EpiCure documentation,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +38,epitools,0.0.12,EpiTools,Quantifying 2D cell shape and epithelial tissue dynamics,Yanlan Mao,"BSD 3-Clause Licence Copyright (c) 2022-2023, EpiTools Developers All rights reserved. @@ -3539,12 +4104,103 @@ Redistribution and use in source and binary forms, with or without modification, Neither the name of the copyright holder nor the names of its contributors may be used to endorse or promote products derived from this software without specific prior written permission. THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ""AS IS"" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. -","['Framework :: napari', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Medical Science Apps.', 'Topic :: Scientific/Engineering :: Bio-Informatics']","['PartSeg', 'magicgui', 'matplotlib', 'napari', 'networkx', 'numpy', 'pandas', 'scikit-image >=0.20', 'scipy', ""black ; extra == 'dev'"", ""mypy ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""pyqt5 ; extra == 'dev'"", ""ruff ; extra == 'dev'"", ""tox ; extra == 'dev'"", ""myst-parser ; extra == 'docs'"", ""pydata-sphinx-theme ; extra == 'docs'"", ""pytz ; extra == 'docs'"", ""sphinx-autobuild ; extra == 'docs'"", ""sphinx <5 ; extra == 'docs'"", ""sphinx-autodoc-typehints ; extra == 'docs'"", ""sphinxcontrib-video ; extra == 'docs'"", ""types-pytz ; extra == 'docs'"", ""btrack[napari] >=0.6.1 ; extra == 'wf'"", ""napari-segment-blobs-and-things-with-membranes ; extra == 'wf'""]",>=3.9,"['Code, https://github.com/epitools/epitools', 'Download, https://pypi.org/project/epitools', 'Homepage, https://github.com/epitools/epitools', 'Issues, https://github.com/epitools/epitools/issues']","['dev', 'docs', 'wf']",False,0.0.12,conda-forge/epitools/0.0.12,,,,,conda,noarch/epitools-0.0.12-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib-base', 'napari', 'networkx', 'numpy', 'pandas', 'partseg', 'python >=3.9', 'scikit-image >=0.20', 'scipy']",pyh9208f05_0,1694126196259.0,None-any-None,noarch,2023-09-07 22:38:57.314000+00:00,ce670de24eb7dbf7d1bfab3d46cc0ab5,950938ab96b32225eb7ea41b620820c1081576f16d0cb07171b56a9de3f42996,333862.0,conda-forge/epitools/0.0.12/noarch/epitools-0.0.12-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/epitools/0.0.12/noarch/epitools-0.0.12-pyh9208f05_0.conda,conda,0.0.12,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,epitools.write_single_image,Save an image layer with EpiTools,epitools._writer:write_single_image,epitools.write_single_labels,Save a labels layer with EpiTools,epitools._writer:write_single_labels,epitools.load_sample_data,Load sample data from EpiTools,epitools._sample_data:load_sample_data,epitools.projection_widget,Projection (selective plane),False,epitools.projection_2ch_widget,Projection (2 channel with reference channel),False,epitools.segmentation_widget,Segmentation (local minima seeded watershed),False,epitools.cell_statistics_widget,Cell statistics,False,epitools.projection_widget,Epitools Projection Widget,epitools.main:create_projection_widget,epitools.write_single_image,['image'],,epitools.write_single_labels,['labels'],"['.tif', '.tiff']",,epitools.load_sample_data,test_image,EpiTools,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,epitools.projection_2ch_widget,Epitools Projection Widget 2 Channels,epitools.main:create_projection_2ch_widget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,epitools.segmentation_widget,Epitools Segmentation Widget,epitools.main:create_segmentation_widget,epitools.cell_statistics_widget,Epitools cell statistics widget,epitools.main:create_cell_statistics_widget,,,,,,,,,,,,,"['.tif', '.tiff']",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -34,faser,0.3.0,faser,Faser is a tool for vectorial psf simulation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,faser.napari.helper_widget,OpenHelper Widget,faser.napari.widgets.helper_widget:HelperWidget,,,,2.3,faser,0.3.0,,Faser is a tool for vectorial psf simulation,"# faser +","['Framework :: napari', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Medical Science Apps.', 'Topic :: Scientific/Engineering :: Bio-Informatics']","['PartSeg', 'magicgui', 'matplotlib', 'napari', 'networkx', 'numpy', 'pandas', 'scikit-image >=0.20', 'scipy', ""black ; extra == 'dev'"", ""mypy ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""pyqt5 ; extra == 'dev'"", ""ruff ; extra == 'dev'"", ""tox ; extra == 'dev'"", ""myst-parser ; extra == 'docs'"", ""pydata-sphinx-theme ; extra == 'docs'"", ""pytz ; extra == 'docs'"", ""sphinx-autobuild ; extra == 'docs'"", ""sphinx <5 ; extra == 'docs'"", ""sphinx-autodoc-typehints ; extra == 'docs'"", ""sphinxcontrib-video ; extra == 'docs'"", ""types-pytz ; extra == 'docs'"", ""btrack[napari] >=0.6.1 ; extra == 'wf'"", ""napari-segment-blobs-and-things-with-membranes ; extra == 'wf'""]",>=3.9,"['Code, https://github.com/epitools/epitools', 'Download, https://pypi.org/project/epitools', 'Homepage, https://github.com/epitools/epitools', 'Issues, https://github.com/epitools/epitools/issues']","['dev', 'docs', 'wf']",False,0.0.12,conda-forge/epitools/0.0.12,,,,,conda,noarch/epitools-0.0.12-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib-base', 'napari', 'networkx', 'numpy', 'pandas', 'partseg', 'python >=3.9', 'scikit-image >=0.20', 'scipy']",pyh9208f05_0,1694126196259.0,None-any-None,noarch,2023-09-07 22:38:57.314000+00:00,ce670de24eb7dbf7d1bfab3d46cc0ab5,950938ab96b32225eb7ea41b620820c1081576f16d0cb07171b56a9de3f42996,333862.0,conda-forge/epitools/0.0.12/noarch/epitools-0.0.12-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/epitools/0.0.12/noarch/epitools-0.0.12-pyh9208f05_0.conda,conda,0.0.12,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,epitools.write_single_image,Save an image layer with EpiTools,epitools._writer:write_single_image,epitools.write_single_labels,Save a labels layer with EpiTools,epitools._writer:write_single_labels,epitools.load_sample_data,Load sample data from EpiTools,epitools._sample_data:load_sample_data,epitools.projection_widget,Projection (selective plane),False,epitools.projection_2ch_widget,Projection (2 channel with reference channel),False,epitools.segmentation_widget,Segmentation (local minima seeded watershed),False,epitools.cell_statistics_widget,Cell statistics,False,epitools.projection_widget,Epitools Projection Widget,epitools.main:create_projection_widget,epitools.write_single_image,['image'],,epitools.write_single_labels,['labels'],"['.tif', '.tiff']",,epitools.load_sample_data,test_image,EpiTools,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,epitools.projection_2ch_widget,Epitools Projection Widget 2 Channels,epitools.main:create_projection_2ch_widget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,epitools.segmentation_widget,Epitools Segmentation Widget,epitools.main:create_segmentation_widget,epitools.cell_statistics_widget,Epitools cell statistics widget,epitools.main:create_cell_statistics_widget,,,,,,,,,,"['.tif', '.tiff']",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +39,faser,0.3.0,faser,Faser is a tool for vectorial psf simulation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,faser.napari.helper_widget,OpenHelper Widget,faser.napari.widgets.helper_widget:HelperWidget,,,,2.3,faser,0.3.0,,Faser is a tool for vectorial psf simulation,"# faser Describe your project here. -",text/markdown,,,Johannes Roos ,,['Framework :: napari'],"['matplotlib>=3.9.2', 'numpy<2', 'pydantic>2', 'python-slugify>=8.0.4', ""rich-click>=1.8.3; extra == 'cli'"", ""pyqt5>=5.15.11; extra == 'full'"", ""rich-click>=1.8.3; extra == 'full'"", ""numba>=0.60.0; extra == 'numba'""]","<=3.13,>3.9",,"['cli', 'full', 'numba']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,faser.napari.main_widget,Open Main Widget,faser.napari.widgets.main_widget:MainWidget,,,,,,,faser.napari.helper_widget,Faser (Helper),False,faser.napari.main_widget,Faser (Generator),False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -35,fish-scan,1.0.9,Fish Scan,Plugin to enhance fish detection and analysis for underwater research,Arianna Ravera," +",text/markdown,,,Johannes Roos ,,['Framework :: napari'],"['matplotlib>=3.9.2', 'numpy<2', 'pydantic>2', 'python-slugify>=8.0.4', ""rich-click>=1.8.3; extra == 'cli'"", ""pyqt5>=5.15.11; extra == 'full'"", ""rich-click>=1.8.3; extra == 'full'"", ""numba>=0.60.0; extra == 'numba'""]","<=3.13,>3.9",,"['cli', 'full', 'numba']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,faser.napari.main_widget,Open Main Widget,faser.napari.widgets.main_widget:MainWidget,,,,,,,faser.napari.helper_widget,Faser (Helper),False,faser.napari.main_widget,Faser (Generator),False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +40,featureforest,0.0.6,Feature Forest,A napari plugin for segmentation using vision transformer features,,BSD-3-Clause,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,featureforest.make_feature_extractor_widget,Make feature extractor widget,featureforest:FeatureExtractorWidget,,,,2.3,featureforest,0.0.6,,A napari plugin for segmentation using vision transformer features,"# Feature Forest + +[![License BSD-3](https://img.shields.io/pypi/l/featureforest.svg?color=green)](https://github.com/juglab/featureforest/blob/main/LICENSE) +[![PyPI](https://img.shields.io/pypi/v/featureforest.svg?color=green)](https://pypi.org/project/featureforest) +[![Python Version](https://img.shields.io/pypi/pyversions/featureforest.svg?color=green)](https://python.org) +[![tests](https://github.com/juglab/featureforest/workflows/tests/badge.svg)](https://github.com/juglab/featureforest/actions) +[![codecov](https://codecov.io/gh/juglab/featureforest/branch/main/graph/badge.svg)](https://codecov.io/gh/juglab/featureforest) +[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/featureforest)](https://napari-hub.org/plugins/featureforest) + +**A napari plugin for making image annotation using feature space of vision transformers and random forest classifier.** +We developed a *napari* plugin to train a *Random Forest* model using extracted features of vision foundation models and just a few scribble labels provided by the user as input. This approach can do the segmentation of desired objects almost as well as manual segmentations but in a much shorter time with less manual effort. + +---------------------------------- + +## Documentation +The plugin documentation is [here](docs/index.md). + +## Installation +To install this plugin you need to use [conda] or [mamba] to create a environment and install the requirements. Use the commands below to create the environment and install the plugin: +```bash +# for GPU +conda env create -f ./env_gpu.yml +``` +```bash +# if you don't have a GPU +conda env create -f ./env_cpu.yml +``` + +#### Note: You need to install `sam-2` which can be install easily using conda. To install `sam-2` using `pip` please refer to the official [sam-2](https://github.com/facebookresearch/sam2) repository. + +### Requirements +- `python >= 3.10` +- `numpy==1.24.4` +- `opencv-python` +- `scikit-learn` +- `scikit-image` +- `matplotlib` +- `pyqt` +- `magicgui` +- `qtpy` +- `napari` +- `h5py` +- `pytorch=2.3.1` +- `torchvision=0.18.1` +- `timm=1.0.9` +- `pynrrd` +- `segment-anything` +- `sam-2` + +If you want to install the plugin manually using GPU, please follow the pytorch installation instruction [here](https://pytorch.org/get-started/locally/). +For detailed napari installation see [here](https://napari.org/stable/tutorials/fundamentals/installation). + +### Installing The Plugin +If you use the provided conda environment yaml files, the plugin will be installed automatically. But in case you already have the environment setup, +you can just install the plugin. First clone the repository: +```bash +git clone https://github.com/juglab/featureforest +``` +Then run the following commands: +```bash +cd ./featureforest +pip install . +``` + + +## License + +Distributed under the terms of the [BSD-3] license, +""featureforest"" is free and open source software + +## Issues + +If you encounter any problems, please [file an issue] along with a detailed description. + +[napari]: https://github.com/napari/napari +[Cookiecutter]: https://github.com/audreyr/cookiecutter +[@napari]: https://github.com/napari +[MIT]: http://opensource.org/licenses/MIT +[BSD-3]: http://opensource.org/licenses/BSD-3-Clause +[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt +[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt +[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0 +[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt +[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin + +[napari]: https://github.com/napari/napari +[tox]: https://tox.readthedocs.io/en/latest/ +[pip]: https://pypi.org/project/pip/ +[PyPI]: https://pypi.org/ +[conda]: https://conda.io/projects/conda/en/latest/index.html +[mamba]: https://mamba.readthedocs.io/en/latest/installation/mamba-installation.html",text/markdown,,,"Mehdi Seifi , Vera Galinova ",BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Framework :: napari', 'License :: OSI Approved :: BSD License', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['h5py', 'iopath>=0.1.10', 'magicgui', 'matplotlib', 'napari', 'numpy==1.24.4', 'opencv-python', 'pooch', 'pynrrd', 'pyqt5', 'qtpy', 'scikit-image', 'scikit-learn', 'segment-anything-py', 'timm==1.0.9', 'torch==2.3.1', 'torchvision==0.18.1', ""pre-commit; extra == 'dev'"", ""pytest; extra == 'dev'"", ""pytest-cov; extra == 'dev'"", ""sybil; extra == 'dev'"", ""tox; extra == 'dev'"", ""tox-gh-actions; extra == 'dev'""]",>=3.10,"['homepage, https://featureforest.github.io/', 'repository, https://github.com/juglab/featureforest']",['dev'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation']",featureforest.make_segmentation_widget,Make segmentation widget,featureforest:SegmentationWidget,,,,,,,featureforest.make_feature_extractor_widget,Feature Extractor,False,featureforest.make_segmentation_widget,Segmentation Widget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +41,fish-scan,1.1.0,Fish Scan,Plugin to enhance fish detection and analysis for underwater research,Arianna Ravera," Copyright (c) 2024, Arianna Ravera All rights reserved. @@ -3572,7 +4228,7 @@ SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. -",https://github.com/ariannaravera/fish-scan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,fish-scan.get_reader,Open data with Fish Scan,fish_scan._reader:napari_get_reader,fish-scan.get_reader,['*.npy'],False,2.1,fish-scan,1.0.9,,Plugin to enhance fish detection and analysis for underwater research,"# fish-scan +",https://github.com/ariannaravera/fish-scan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,fish-scan.get_reader,Open data with Fish Scan,fish_scan._reader:napari_get_reader,fish-scan.get_reader,['*.npy'],False,2.1,fish-scan,1.1.0,,Plugin to enhance fish detection and analysis for underwater research,"# fish-scan [![License BSD-3](https://img.shields.io/pypi/l/fish-scan.svg?color=green)](https://github.com/ariannaravera/fish-scan/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/fish-scan.svg?color=green)](https://pypi.org/project/fish-scan) @@ -3720,8 +4376,8 @@ SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. -","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', 'opencv-python', 'matplotlib', 'scikit-learn', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.9,"['Bug Tracker, https://github.com/ariannaravera/fish-scan/issues', 'Documentation, https://github.com/ariannaravera/fish-scan#README.md', 'Source Code, https://github.com/ariannaravera/fish-scan', 'User Support, https://github.com/ariannaravera/fish-scan/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Image Processing', 'Segmentation', 'Measurement']",fish-scan.write_multiple,Save multi-layer data with Fish Scan,fish_scan._writer:write_multiple,fish-scan.write_single_image,Save image data with Fish Scan,fish_scan._writer:write_single_image,fish-scan.make_sample_data,Load sample data from Fish Scan,fish_scan._sample_data:make_sample_data,fish-scan.analysis,FishAnalysis,False,,,,,,,,,,fish-scan.analysis,Analyse the image,fish_scan:FishAnalysis,fish-scan.write_multiple,"['image*', 'labels*']",,fish-scan.write_single_image,['image'],['.npy'],,fish-scan.make_sample_data,unique_id.1,Fish Scan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -36,generate-dense-patches,0.0.2,Generate Dense Patches,A simple plugin to create a lot of training data from a 3D volume and mask,Aayush Bhatawadekar,BSD-3-Clause,https://github.com/volume-em/generate-dense-patches,653cc977d689d26061e4dd20,['conda'],,https://pypi.org/project/generate-dense-patches,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/generate-dense-patches,http://api.anaconda.org/packages/conda-forge/generate-dense-patches,http://anaconda.org/conda-forge/generate-dense-patches,['0.0.2'],0.0.2,0.0.2,['noarch'],3.0,https://github.com/volume-em/generate-dense-patches,['pyhd8ed1ab_0'],0.0.2,conda-forge/generate-dense-patches/0.0.2,1.0,0.0,2023-10-28 08:42:28.322000+00:00,2023-10-28 08:42:31.259000+00:00,conda,noarch/generate-dense-patches-0.0.2-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['imagecodecs', 'magicgui', 'napari >=0.4.18', 'napari-plugin-engine >=0.2.0', 'numpy 1.22', 'python >=3.8,<3.11', 'scikit-image >=0.19', 'scipy', 'tifffile', 'tqdm']",noarch,1698482442370.0,None-any-None,pyhd8ed1ab_0,2023-10-28 08:42:28.738000+00:00,93ae514703c414a12444813e2ff4d82f,f5ea54092ba61e8c831089423d7318bd0634e897d05d8544a3bc1644f2c8726e,14073.0,conda-forge/generate-dense-patches/0.0.2/noarch/generate-dense-patches-0.0.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/generate-dense-patches/0.0.2/noarch/generate-dense-patches-0.0.2-pyhd8ed1ab_0.conda,conda,0.0.2,conda-forge,['main'],public,,0.2.1,generate-dense-patches.make_patches_widget,Make patches widget,generate_dense_patches._widget:generate_2d_patches_widget,,,,2.1,generate-dense-patches,0.0.2,,A simple plugin to create a lot of training data from a 3D volume and mask,"# generate-dense-patches +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', 'opencv-python', 'matplotlib', 'scikit-learn', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.9,"['Bug Tracker, https://github.com/ariannaravera/fish-scan/issues', 'Documentation, https://github.com/ariannaravera/fish-scan#README.md', 'Source Code, https://github.com/ariannaravera/fish-scan', 'User Support, https://github.com/ariannaravera/fish-scan/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Image Processing', 'Segmentation', 'Measurement']",fish-scan.write_multiple,Save multi-layer data with Fish Scan,fish_scan._writer:write_multiple,fish-scan.write_single_image,Save image data with Fish Scan,fish_scan._writer:write_single_image,fish-scan.make_sample_data,Load sample data from Fish Scan,fish_scan._sample_data:make_sample_data,fish-scan.analysis,FishAnalysis,False,,,,,,,,,,fish-scan.analysis,Analyse the image,fish_scan:FishAnalysis,fish-scan.write_multiple,"['image*', 'labels*']",,fish-scan.write_single_image,['image'],['.npy'],,fish-scan.make_sample_data,unique_id.1,Fish Scan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +42,generate-dense-patches,0.0.2,Generate Dense Patches,A simple plugin to create a lot of training data from a 3D volume and mask,Aayush Bhatawadekar,BSD-3-Clause,https://github.com/volume-em/generate-dense-patches,653cc977d689d26061e4dd20,['conda'],,https://pypi.org/project/generate-dense-patches,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/generate-dense-patches,http://api.anaconda.org/packages/conda-forge/generate-dense-patches,http://anaconda.org/conda-forge/generate-dense-patches,['0.0.2'],0.0.2,0.0.2,['noarch'],3.0,https://github.com/volume-em/generate-dense-patches,['pyhd8ed1ab_0'],0.0.2,conda-forge/generate-dense-patches/0.0.2,1.0,0.0,2023-10-28 08:42:28.322000+00:00,2023-10-28 08:42:31.259000+00:00,conda,noarch/generate-dense-patches-0.0.2-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['imagecodecs', 'magicgui', 'napari >=0.4.18', 'napari-plugin-engine >=0.2.0', 'numpy 1.22', 'python >=3.8,<3.11', 'scikit-image >=0.19', 'scipy', 'tifffile', 'tqdm']",noarch,1698482442370.0,None-any-None,pyhd8ed1ab_0,2023-10-28 08:42:28.738000+00:00,93ae514703c414a12444813e2ff4d82f,f5ea54092ba61e8c831089423d7318bd0634e897d05d8544a3bc1644f2c8726e,14073.0,conda-forge/generate-dense-patches/0.0.2/noarch/generate-dense-patches-0.0.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/generate-dense-patches/0.0.2/noarch/generate-dense-patches-0.0.2-pyhd8ed1ab_0.conda,conda,0.0.2,conda-forge,['main'],public,,0.2.1,generate-dense-patches.make_patches_widget,Make patches widget,generate_dense_patches._widget:generate_2d_patches_widget,,,,2.1,generate-dense-patches,0.0.2,,A simple plugin to create a lot of training data from a 3D volume and mask,"# generate-dense-patches [![License BSD-3](https://img.shields.io/pypi/l/generate-dense-patches.svg?color=green)](https://github.com/volume-em/generate-dense-patches/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/generate-dense-patches.svg?color=green)](https://pypi.org/project/generate-dense-patches) @@ -3797,8 +4453,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/volume-em/generate-dense-patches,Aayush Bhatawadekar,asbhatawadekar@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['napari >=0.4.18', 'napari-plugin-engine >=0.2.0', 'numpy ==1.22', 'scikit-image >=0.19', 'magicgui', 'imagecodecs', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/volume-em/generate-dense-patches/issues', 'Documentation, https://github.com/volume-em/generate-dense-patches#README.md', 'Source Code, https://github.com/volume-em/generate-dense-patches', 'User Support, https://github.com/volume-em/generate-dense-patches/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,generate-dense-patches.make_patches_widget,Generate 2D Patches,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -37,grabber-ift,0.2.2,grabber-ift,A tool for contour-based segmentation correction (2D only).,Jordão Bragantini,MIT,UNKNOWN,61fa707d39552dcb59872133,['conda'],,https://github.com/LIDS-UNICAMP/grabber,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/grabber-ift,http://api.anaconda.org/packages/conda-forge/grabber-ift,http://anaconda.org/conda-forge/grabber-ift,['0.2.2'],0.2.2,0.2.2,['noarch'],3.0,,['pyhd8ed1ab_0'],0.2.2,conda-forge/grabber-ift/0.2.2,1.0,0.0,2022-02-02 11:52:27.851000+00:00,2023-06-18 08:40:41.085000+00:00,conda,noarch/grabber-ift-0.2.2-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'opencv >=4.4.0', 'pyift >=0.0.4', 'python >=3.7', 'scipy >=1.7.2']",noarch,1643802573246.0,None-any-None,pyhd8ed1ab_0,2022-02-02 11:52:28.116000+00:00,eb9c78207d2f73ea759cb7c13a9344f1,None,14387.0,conda-forge/grabber-ift/0.2.2/noarch/grabber-ift-0.2.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/grabber-ift/0.2.2/noarch/grabber-ift-0.2.2-pyhd8ed1ab_0.tar.bz2,conda,0.2.2,conda-forge,['main'],public,,0.2.1,grabber-ift.GrabberWidget,GrabberWidget,grabber.grabberwidget:GrabberWidget,,,,2.1,grabber-ift,0.2.2,['UNKNOWN'],A tool for contour-based segmentation correction (2D only).,"# Grabber: A Tool to Improve Convergence in Interactive Image Segmentation +",text/markdown,https://github.com/volume-em/generate-dense-patches,Aayush Bhatawadekar,asbhatawadekar@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['napari >=0.4.18', 'napari-plugin-engine >=0.2.0', 'numpy ==1.22', 'scikit-image >=0.19', 'magicgui', 'imagecodecs', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/volume-em/generate-dense-patches/issues', 'Documentation, https://github.com/volume-em/generate-dense-patches#README.md', 'Source Code, https://github.com/volume-em/generate-dense-patches', 'User Support, https://github.com/volume-em/generate-dense-patches/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,generate-dense-patches.make_patches_widget,Generate 2D Patches,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +43,grabber-ift,0.2.2,grabber-ift,A tool for contour-based segmentation correction (2D only).,Jordão Bragantini,MIT,UNKNOWN,61fa707d39552dcb59872133,['conda'],,https://github.com/LIDS-UNICAMP/grabber,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/grabber-ift,http://api.anaconda.org/packages/conda-forge/grabber-ift,http://anaconda.org/conda-forge/grabber-ift,['0.2.2'],0.2.2,0.2.2,['noarch'],3.0,,['pyhd8ed1ab_0'],0.2.2,conda-forge/grabber-ift/0.2.2,1.0,0.0,2022-02-02 11:52:27.851000+00:00,2023-06-18 08:40:41.085000+00:00,conda,noarch/grabber-ift-0.2.2-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'opencv >=4.4.0', 'pyift >=0.0.4', 'python >=3.7', 'scipy >=1.7.2']",noarch,1643802573246.0,None-any-None,pyhd8ed1ab_0,2022-02-02 11:52:28.116000+00:00,eb9c78207d2f73ea759cb7c13a9344f1,None,14387.0,conda-forge/grabber-ift/0.2.2/noarch/grabber-ift-0.2.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/grabber-ift/0.2.2/noarch/grabber-ift-0.2.2-pyhd8ed1ab_0.tar.bz2,conda,0.2.2,conda-forge,['main'],public,,0.2.1,grabber-ift.GrabberWidget,GrabberWidget,grabber.grabberwidget:GrabberWidget,,,,2.1,grabber-ift,0.2.2,['UNKNOWN'],A tool for contour-based segmentation correction (2D only).,"# Grabber: A Tool to Improve Convergence in Interactive Image Segmentation [![License](https://img.shields.io/pypi/l/grabber.svg?color=green)](https://github.com/LIDS-UNICAMP/grabber/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/grabber.svg?color=green)](https://pypi.org/project/grabber) @@ -3883,8 +4539,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,UNKNOWN,Jordão Bragantini,jordao.bragantini@gmail.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['napari-plugin-engine (>=0.1.4)', 'pyift (>=0.0.4)', 'opencv-python-headless (>=4.4.0)', 'scipy (>=1.7.2)']",>=3.7,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,grabber-ift.GrabberWidget,GrabberWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -38,guanine-crystal-analysis,0.0.2,Guanine Crystal Analysis,"A plugin for the guanine crystal segmentation, classification and characterization in the zebrafish eye",Mara Lampert,BSD-3-Clause,https://github.com/biapol/guanine-crystal-analysis,62fe0a2e2feb80bd998049dc,['conda'],,https://github.com/biapol/guanine-crystal-analysis,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/guanine-crystal-analysis,http://api.anaconda.org/packages/conda-forge/guanine-crystal-analysis,http://anaconda.org/conda-forge/guanine-crystal-analysis,"['0.0.1', '0.0.2']",0.0.1,0.0.1,['noarch'],4.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/guanine-crystal-analysis/0.0.1,1.0,0.0,2022-08-18 09:45:15.816000+00:00,2023-06-05 20:35:05.725000+00:00,conda,noarch/guanine-crystal-analysis-0.0.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['apoc-backend', 'magicgui', 'napari-simpleitk-image-processing', 'napari-skimage-regionprops', 'napari-workflows', 'numpy', 'pandas', 'pyclesperanto-prototype', 'python >=3.8', 'qtpy', 'scikit-image', 'scikit-learn']",noarch,1660815748838.0,None-any-None,pyhd8ed1ab_0,2022-08-18 09:45:16.217000+00:00,97c7b56eed7653a8119fb7910d7ec7ca,9b879cc6e5068760f945aae798b9b5876873165151eb360a1e2b91db172de900,22597.0,conda-forge/guanine-crystal-analysis/0.0.1/noarch/guanine-crystal-analysis-0.0.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/guanine-crystal-analysis/0.0.1/noarch/guanine-crystal-analysis-0.0.1-pyhd8ed1ab_0.tar.bz2,conda,0.0.1,conda-forge,['main'],public,,0.2.1,guanine-crystal-analysis.normalization,normalization,guanine_crystal_analysis._widget:normalization,,,,2.1,guanine-crystal-analysis,0.0.2,,"A plugin for the guanine crystal segmentation, classification and characterization in the zebrafish eye","# guanine-crystal-analysis +",text/markdown,UNKNOWN,Jordão Bragantini,jordao.bragantini@gmail.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['napari-plugin-engine (>=0.1.4)', 'pyift (>=0.0.4)', 'opencv-python-headless (>=4.4.0)', 'scipy (>=1.7.2)']",>=3.7,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,grabber-ift.GrabberWidget,GrabberWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +44,guanine-crystal-analysis,0.0.2,Guanine Crystal Analysis,"A plugin for the guanine crystal segmentation, classification and characterization in the zebrafish eye",Mara Lampert,BSD-3-Clause,https://github.com/biapol/guanine-crystal-analysis,62fe0a2e2feb80bd998049dc,['conda'],,https://github.com/biapol/guanine-crystal-analysis,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/guanine-crystal-analysis,http://api.anaconda.org/packages/conda-forge/guanine-crystal-analysis,http://anaconda.org/conda-forge/guanine-crystal-analysis,"['0.0.1', '0.0.2']",0.0.1,0.0.1,['noarch'],4.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/guanine-crystal-analysis/0.0.1,1.0,0.0,2022-08-18 09:45:15.816000+00:00,2023-06-05 20:35:05.725000+00:00,conda,noarch/guanine-crystal-analysis-0.0.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['apoc-backend', 'magicgui', 'napari-simpleitk-image-processing', 'napari-skimage-regionprops', 'napari-workflows', 'numpy', 'pandas', 'pyclesperanto-prototype', 'python >=3.8', 'qtpy', 'scikit-image', 'scikit-learn']",noarch,1660815748838.0,None-any-None,pyhd8ed1ab_0,2022-08-18 09:45:16.217000+00:00,97c7b56eed7653a8119fb7910d7ec7ca,9b879cc6e5068760f945aae798b9b5876873165151eb360a1e2b91db172de900,22597.0,conda-forge/guanine-crystal-analysis/0.0.1/noarch/guanine-crystal-analysis-0.0.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/guanine-crystal-analysis/0.0.1/noarch/guanine-crystal-analysis-0.0.1-pyhd8ed1ab_0.tar.bz2,conda,0.0.1,conda-forge,['main'],public,,0.2.1,guanine-crystal-analysis.normalization,normalization,guanine_crystal_analysis._widget:normalization,,,,2.1,guanine-crystal-analysis,0.0.2,,"A plugin for the guanine crystal segmentation, classification and characterization in the zebrafish eye","# guanine-crystal-analysis [![License BSD-3](https://img.shields.io/pypi/l/guanine-crystal-analysis.svg?color=green)](https://github.com/biopo/guanine-crystal-analysis/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/guanine-crystal-analysis.svg?color=green)](https://pypi.org/project/guanine-crystal-analysis) @@ -4029,8 +4685,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/biapol/guanine-crystal-analysis,Mara Lampert,mara_harriet.lampert@mailbox.tu-dresden.de,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'apoc', 'scikit-image', 'pandas', 'napari-simpleitk-image-processing', 'napari-skimage-regionprops', 'pyclesperanto-prototype', 'scikit-learn', 'napari-workflows', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/biapol/guanine-crystal-analysis/issues', 'Documentation, https://github.com/biapol/guanine-crystal-analysis#README.md', 'Source Code, https://github.com/biapol/guanine-crystal-analysis', 'User Support, https://github.com/biapol/guanine-crystal-analysis/issues']",['testing'],False,0.0.2,conda-forge/guanine-crystal-analysis/0.0.2,,,,,conda,noarch/guanine-crystal-analysis-0.0.2-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['apoc-backend', 'magicgui', 'napari-simpleitk-image-processing', 'napari-skimage-regionprops', 'napari-workflows', 'numpy', 'pandas', 'pyclesperanto-prototype', 'python >=3.8', 'qtpy', 'scikit-image', 'scikit-learn']",pyhd8ed1ab_0,1685997165931.0,None-any-None,noarch,2023-06-05 20:35:04.077000+00:00,75bcb25311355a2d46cbb2e0bbb7ec73,5ebef16445e2f06aae789961def5e5d682805c261b366cf5f7ae3fc1a11dcb63,25565.0,conda-forge/guanine-crystal-analysis/0.0.2/noarch/guanine-crystal-analysis-0.0.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/guanine-crystal-analysis/0.0.2/noarch/guanine-crystal-analysis-0.0.2-pyhd8ed1ab_0.conda,conda,0.0.2,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,guanine-crystal-analysis.segmentation,segmentation,guanine_crystal_analysis._widget:segmentation,guanine-crystal-analysis.analyze_image,analyze_image,guanine_crystal_analysis._widget:analyze_image,guanine-crystal-analysis.classify_objects,classify_objects,guanine_crystal_analysis._widget:classify_objects,guanine-crystal-analysis.normalization,Normalization,True,guanine-crystal-analysis.segmentation,Segmentation,True,guanine-crystal-analysis.analyze_image,Analyze Image,True,guanine-crystal-analysis.classify_objects,Classify Objects,True,guanine-crystal-analysis.bad_label_exclusion,bad_label_exclusion,guanine_crystal_analysis._widget:bad_label_exclusion,,,,,,,,guanine-crystal-analysis.make_sample_data,unique_id.1,Guanine Crystal Analysis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,guanine-crystal-analysis.analyze_deluxe,analyze_deluxe,guanine_crystal_analysis._widget:analyze_deluxe,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,guanine-crystal-analysis.bad_label_exclusion,Bad Label Exclusion,True,guanine-crystal-analysis.analyze_deluxe,Analyze Deluxe,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -39,hesperos,0.2.1,Hesperos application,A plugin to manually or semi-automatically segment medical data and correct previous segmentation data.,Charlotte Godard,BSD-3-Clause,https://github.com/chgodard/hesperos,62c6a1599c20b2a970313020,['conda'],,https://github.com/chgodard/hesperos,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/hesperos,http://api.anaconda.org/packages/conda-forge/hesperos,http://anaconda.org/conda-forge/hesperos,"['0.1.13', '0.1.24', '0.1.25', '0.1.29', '0.1.30', '0.1.31', '0.1.32', '0.1.33', '0.1.34', '0.1.35', '0.1.39', '0.1.42', '0.2', '0.2.1']",0.1.42,0.2.1,['noarch'],16.0,,['pyhd8ed1ab_0'],0.1.13,conda-forge/hesperos/0.1.13,1.0,0.0,2022-07-07 09:03:19.607000+00:00,2023-07-25 19:03:05.517000+00:00,conda,noarch/hesperos-0.1.13-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari <0.4.15', 'napari-plugin-engine', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scikit-learn', 'simpleitk', 'tifffile']",noarch,1657184449694.0,None-any-None,pyhd8ed1ab_0,2022-07-07 09:03:19.961000+00:00,98945e5c7c0a9d102dd3ff83f6442d09,None,33296.0,conda-forge/hesperos/0.1.13/noarch/hesperos-0.1.13-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/hesperos/0.1.13/noarch/hesperos-0.1.13-pyhd8ed1ab_0.tar.bz2,conda,0.1.13,conda-forge,['main'],public,,0.2.1,hesperos.make_manual_segmentation_widget,Make Manual Segmentation Widget,hesperos._manual_widget:ManualSegmentationWidget,,,,2.1,hesperos,0.2.1,,A plugin to manually or semi-automatically segment medical data and correct previous segmentation data.,"
+",text/markdown,https://github.com/biapol/guanine-crystal-analysis,Mara Lampert,mara_harriet.lampert@mailbox.tu-dresden.de,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'apoc', 'scikit-image', 'pandas', 'napari-simpleitk-image-processing', 'napari-skimage-regionprops', 'pyclesperanto-prototype', 'scikit-learn', 'napari-workflows', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/biapol/guanine-crystal-analysis/issues', 'Documentation, https://github.com/biapol/guanine-crystal-analysis#README.md', 'Source Code, https://github.com/biapol/guanine-crystal-analysis', 'User Support, https://github.com/biapol/guanine-crystal-analysis/issues']",['testing'],False,0.0.2,conda-forge/guanine-crystal-analysis/0.0.2,,,,,conda,noarch/guanine-crystal-analysis-0.0.2-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['apoc-backend', 'magicgui', 'napari-simpleitk-image-processing', 'napari-skimage-regionprops', 'napari-workflows', 'numpy', 'pandas', 'pyclesperanto-prototype', 'python >=3.8', 'qtpy', 'scikit-image', 'scikit-learn']",pyhd8ed1ab_0,1685997165931.0,None-any-None,noarch,2023-06-05 20:35:04.077000+00:00,75bcb25311355a2d46cbb2e0bbb7ec73,5ebef16445e2f06aae789961def5e5d682805c261b366cf5f7ae3fc1a11dcb63,25565.0,conda-forge/guanine-crystal-analysis/0.0.2/noarch/guanine-crystal-analysis-0.0.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/guanine-crystal-analysis/0.0.2/noarch/guanine-crystal-analysis-0.0.2-pyhd8ed1ab_0.conda,conda,0.0.2,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,guanine-crystal-analysis.segmentation,segmentation,guanine_crystal_analysis._widget:segmentation,guanine-crystal-analysis.analyze_image,analyze_image,guanine_crystal_analysis._widget:analyze_image,guanine-crystal-analysis.classify_objects,classify_objects,guanine_crystal_analysis._widget:classify_objects,guanine-crystal-analysis.normalization,Normalization,True,guanine-crystal-analysis.segmentation,Segmentation,True,guanine-crystal-analysis.analyze_image,Analyze Image,True,guanine-crystal-analysis.classify_objects,Classify Objects,True,guanine-crystal-analysis.bad_label_exclusion,bad_label_exclusion,guanine_crystal_analysis._widget:bad_label_exclusion,,,,,,,,guanine-crystal-analysis.make_sample_data,unique_id.1,Guanine Crystal Analysis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,guanine-crystal-analysis.analyze_deluxe,analyze_deluxe,guanine_crystal_analysis._widget:analyze_deluxe,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,guanine-crystal-analysis.bad_label_exclusion,Bad Label Exclusion,True,guanine-crystal-analysis.analyze_deluxe,Analyze Deluxe,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +45,hesperos,0.2.1,Hesperos application,A plugin to manually or semi-automatically segment medical data and correct previous segmentation data.,Charlotte Godard,BSD-3-Clause,https://github.com/chgodard/hesperos,62c6a1599c20b2a970313020,['conda'],,https://github.com/chgodard/hesperos,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/hesperos,http://api.anaconda.org/packages/conda-forge/hesperos,http://anaconda.org/conda-forge/hesperos,"['0.1.13', '0.1.24', '0.1.25', '0.1.29', '0.1.30', '0.1.31', '0.1.32', '0.1.33', '0.1.34', '0.1.35', '0.1.39', '0.1.42', '0.2', '0.2.1']",0.1.42,0.2.1,['noarch'],16.0,,['pyhd8ed1ab_0'],0.1.13,conda-forge/hesperos/0.1.13,1.0,0.0,2022-07-07 09:03:19.607000+00:00,2023-07-25 19:03:05.517000+00:00,conda,noarch/hesperos-0.1.13-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari <0.4.15', 'napari-plugin-engine', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scikit-learn', 'simpleitk', 'tifffile']",noarch,1657184449694.0,None-any-None,pyhd8ed1ab_0,2022-07-07 09:03:19.961000+00:00,98945e5c7c0a9d102dd3ff83f6442d09,None,33296.0,conda-forge/hesperos/0.1.13/noarch/hesperos-0.1.13-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/hesperos/0.1.13/noarch/hesperos-0.1.13-pyhd8ed1ab_0.tar.bz2,conda,0.1.13,conda-forge,['main'],public,,0.2.1,hesperos.make_manual_segmentation_widget,Make Manual Segmentation Widget,hesperos._manual_widget:ManualSegmentationWidget,,,,2.1,hesperos,0.2.1,,A plugin to manually or semi-automatically segment medical data and correct previous segmentation data.,"
# HESPEROS PLUGIN FOR NAPARI @@ -4305,13 +4961,13 @@ Distributed under the terms of the [BSD-3] license, **Hesperos** is a free and o [PyPI]: https://pypi.org/ [Anaconda]: https://www.anaconda.com/products/distribution#Downloads [VoxelLearning]: https://github.com/DecBayComp/VoxelLearning -",text/markdown,https://github.com/chgodard/hesperos,Charlotte Godard,charlotte.godard@pasteur.fr,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: MacOS :: MacOS X', 'Operating System :: Microsoft :: Windows', 'License :: OSI Approved :: BSD License']","['numpy', 'qtpy', 'tifffile', 'scikit-image', 'scikit-learn', 'SimpleITK', 'pandas', 'napari (<0.4.15)', 'napari-plugin-engine', 'imageio-ffmpeg', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Documentation, https://github.com/chgodard/hesperos/blob/main/README.md', 'Source Code, https://github.com/chgodard/hesperos']",['testing'],False,0.1.24,conda-forge/hesperos/0.1.24,0.1.25,conda-forge/hesperos/0.1.25,0.1.29,conda-forge/hesperos/0.1.29,conda,noarch/hesperos-0.1.24-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari <0.4.15', 'napari-plugin-engine', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scikit-learn', 'simpleitk', 'tifffile']",pyhd8ed1ab_0,1657935089230.0,None-any-None,noarch,2022-07-16 01:34:17.445000+00:00,53f6a7984253c127d46108aee417251a,None,38455.0,conda-forge/hesperos/0.1.24/noarch/hesperos-0.1.24-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/hesperos/0.1.24/noarch/hesperos-0.1.24-pyhd8ed1ab_0.tar.bz2,conda,0.1.24,conda-forge,['main'],conda,noarch/hesperos-0.1.25-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari <0.4.15', 'napari-plugin-engine', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scikit-learn', 'simpleitk', 'tifffile']",noarch,1660339451297.0,None-any-None,pyhd8ed1ab_0,2022-08-12 21:26:45.719000+00:00,761d5c64ad5b2df5ddbaa057c11a13ab,None,38575.0,conda-forge/hesperos/0.1.25/noarch/hesperos-0.1.25-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/hesperos/0.1.25/noarch/hesperos-0.1.25-pyhd8ed1ab_0.tar.bz2,conda,0.1.25,conda-forge,['main'],conda,noarch/hesperos-0.1.29-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari <0.4.15', 'napari-plugin-engine', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scikit-learn', 'simpleitk', 'tifffile']",BSD-3-Clause,python,1666560471649.0,2022-10-23 21:31:01.483000+00:00,46a4998cb6470a58e3a780a7a28609c6,None,42717.0,conda-forge/hesperos/0.1.29/noarch/hesperos-0.1.29-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/hesperos/0.1.29/noarch/hesperos-0.1.29-pyhd8ed1ab_0.tar.bz2,conda,0.1.29,conda-forge,['main'],,hesperos.make_oneshot_segmentation_widget,Make OneShot Segmentation Widget,hesperos._oneshot_widget:OneShotWidget,,,,,,,hesperos.make_manual_segmentation_widget,Manual Segmentation or Correction,False,hesperos.make_oneshot_segmentation_widget,OneShot Segmentation,False,,,,,,,,,,,,,,,,,,,,0.1.30,conda-forge/hesperos/0.1.30,0.1.31,conda-forge/hesperos/0.1.31,0.1.32,conda-forge/hesperos/0.1.32,conda,noarch/hesperos-0.1.30-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['imageio-ffmpeg', 'napari <0.4.15', 'napari-plugin-engine', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scikit-learn', 'simpleitk', 'tifffile']",noarch,1666561453971.0,None-any-None,pyhd8ed1ab_0,2022-10-23 21:47:30.212000+00:00,3b4ffbfdfc3ecb7208e6c630b971cdf4,None,42940.0,conda-forge/hesperos/0.1.30/noarch/hesperos-0.1.30-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/hesperos/0.1.30/noarch/hesperos-0.1.30-pyhd8ed1ab_0.tar.bz2,conda,0.1.30,conda-forge,['main'],conda,noarch/hesperos-0.1.31-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['imageio-ffmpeg', 'napari <0.4.15', 'napari-plugin-engine', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scikit-learn', 'simpleitk', 'tifffile']",noarch,1666660398134.0,None-any-None,pyhd8ed1ab_0,2022-10-25 01:15:53.043000+00:00,4e7b5aa695f8fc4252032cf1f85b33ba,None,42845.0,conda-forge/hesperos/0.1.31/noarch/hesperos-0.1.31-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/hesperos/0.1.31/noarch/hesperos-0.1.31-pyhd8ed1ab_0.tar.bz2,conda,0.1.31,conda-forge,['main'],conda,noarch/hesperos-0.1.32-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['imageio-ffmpeg', 'napari <0.4.15', 'napari-plugin-engine', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scikit-learn', 'simpleitk', 'tifffile']",BSD-3-Clause,python,1666661107402.0,2022-10-25 01:27:33.337000+00:00,a4ce150dba889f106736916f61d3115b,None,42816.0,conda-forge/hesperos/0.1.32/noarch/hesperos-0.1.32-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/hesperos/0.1.32/noarch/hesperos-0.1.32-pyhd8ed1ab_0.tar.bz2,conda,0.1.32,conda-forge,['main'],,,,,,,0.1.33,conda-forge/hesperos/0.1.33,0.1.34,conda-forge/hesperos/0.1.34,conda,noarch/hesperos-0.1.33-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['imageio-ffmpeg', 'napari <0.4.15', 'napari-plugin-engine', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scikit-learn', 'simpleitk', 'tifffile']",noarch,1666661637222.0,None-any-None,pyhd8ed1ab_0,2022-10-25 01:36:25.885000+00:00,a8c4dc377a7c21271a272d96074e0161,None,42802.0,conda-forge/hesperos/0.1.33/noarch/hesperos-0.1.33-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/hesperos/0.1.33/noarch/hesperos-0.1.33-pyhd8ed1ab_0.tar.bz2,conda,0.1.33,conda-forge,['main'],conda,noarch/hesperos-0.1.34-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['imageio-ffmpeg', 'napari <0.4.15', 'napari-plugin-engine', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scikit-learn', 'simpleitk', 'tifffile']",BSD-3-Clause,python,1669398981168.0,2022-11-25 17:58:49.762000+00:00,8a4d2ce0dc327604cd655e3dbcefafd0,55724ac3537232f5b02e5f6ddd4ff2e73f760cebf71bfadf8fcdaa8f3f62c747,44505.0,conda-forge/hesperos/0.1.34/noarch/hesperos-0.1.34-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/hesperos/0.1.34/noarch/hesperos-0.1.34-pyhd8ed1ab_0.conda,conda,0.1.34,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,conda,noarch/hesperos-0.1.35-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['imageio-ffmpeg', 'napari <0.4.15', 'napari-plugin-engine', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scikit-learn', 'simpleitk', 'tifffile']",BSD-3-Clause,python,1669400031471.0,2022-11-25 18:16:19.601000+00:00,f482ecf2cf1a51e1521b4ce83d6d5ff6,17ec7193557f8a3663aa55a479a531768009b3f186d25fa681a1382ac77d0b55,44651.0,conda-forge/hesperos/0.1.35/noarch/hesperos-0.1.35-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/hesperos/0.1.35/noarch/hesperos-0.1.35-pyhd8ed1ab_0.conda,conda,0.1.35,conda-forge,['main'],0.1.35,conda-forge/hesperos/0.1.35,conda,noarch/hesperos-0.1.39-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['imageio-ffmpeg', 'napari <0.4.15', 'napari-plugin-engine', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scikit-learn', 'scipy', 'simpleitk', 'tifffile']",BSD-3-Clause,1674501081591.0,2023-01-23 19:13:34.696000+00:00,75b88ed302873c2cf563a102d152391a,1afda7ae2ebb57c273dd667215cae7acd79faca94efc47577687422dd2036626,46029.0,conda-forge/hesperos/0.1.39/noarch/hesperos-0.1.39-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/hesperos/0.1.39/noarch/hesperos-0.1.39-pyhd8ed1ab_0.conda,conda,0.1.39,conda-forge,['main'],conda,noarch/hesperos-0.1.42-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['imageio-ffmpeg', 'napari <0.4.15', 'napari-plugin-engine', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scikit-learn', 'scipy', 'simpleitk', 'tifffile']",BSD-3-Clause,1682249110947.0,2023-04-23 11:27:30.540000+00:00,de840436790df733d7a46fd7626d2017,e1bd5f74730fa67701a8cc41789775a5e44d940b9687d313a6b02106d1b05166,47498.0,conda-forge/hesperos/0.1.42/noarch/hesperos-0.1.42-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/hesperos/0.1.42/noarch/hesperos-0.1.42-pyhd8ed1ab_0.conda,conda,0.1.42,conda-forge,['main'],conda,noarch/hesperos-0.2-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['imageio-ffmpeg', 'napari <0.4.15', 'napari-plugin-engine', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scikit-learn', 'scipy', 'simpleitk', 'tifffile']",BSD-3-Clause,1690310873171.0,2023-07-25 18:50:46.728000+00:00,55cf29e1e42f58cce733d128c0c73caa,09c73aacbb9d372a29121fa0ce678a691538188f3f1a299164f72cc3a2b14e91,54352.0,conda-forge/hesperos/0.2/noarch/hesperos-0.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/hesperos/0.2/noarch/hesperos-0.2-pyhd8ed1ab_0.conda,conda,0.2,conda-forge,['main'],,, -40,hipocount-napari,0.0.1,hipocount-napari,Quantitative analysis of immunofluorescence images of hippocampal slices,Borys Olifirov,MIT,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,hipocount-napari.stack_process_widget,Preprocessing,hipocount_napari._widget:stack_process,,,,2.1,hipocount-napari,0.0.1,,Quantitative analysis of immunofluorescence images of hippocampal slices,"hipocount-napari +",text/markdown,https://github.com/chgodard/hesperos,Charlotte Godard,charlotte.godard@pasteur.fr,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: MacOS :: MacOS X', 'Operating System :: Microsoft :: Windows', 'License :: OSI Approved :: BSD License']","['numpy', 'qtpy', 'tifffile', 'scikit-image', 'scikit-learn', 'SimpleITK', 'pandas', 'napari (<0.4.15)', 'napari-plugin-engine', 'imageio-ffmpeg', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Documentation, https://github.com/chgodard/hesperos/blob/main/README.md', 'Source Code, https://github.com/chgodard/hesperos']",['testing'],False,0.1.24,conda-forge/hesperos/0.1.24,0.1.25,conda-forge/hesperos/0.1.25,0.1.29,conda-forge/hesperos/0.1.29,conda,noarch/hesperos-0.1.24-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari <0.4.15', 'napari-plugin-engine', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scikit-learn', 'simpleitk', 'tifffile']",pyhd8ed1ab_0,1657935089230.0,None-any-None,noarch,2022-07-16 01:34:17.445000+00:00,53f6a7984253c127d46108aee417251a,None,38455.0,conda-forge/hesperos/0.1.24/noarch/hesperos-0.1.24-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/hesperos/0.1.24/noarch/hesperos-0.1.24-pyhd8ed1ab_0.tar.bz2,conda,0.1.24,conda-forge,['main'],conda,noarch/hesperos-0.1.25-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari <0.4.15', 'napari-plugin-engine', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scikit-learn', 'simpleitk', 'tifffile']",noarch,1660339451297.0,None-any-None,pyhd8ed1ab_0,2022-08-12 21:26:45.719000+00:00,761d5c64ad5b2df5ddbaa057c11a13ab,None,38575.0,conda-forge/hesperos/0.1.25/noarch/hesperos-0.1.25-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/hesperos/0.1.25/noarch/hesperos-0.1.25-pyhd8ed1ab_0.tar.bz2,conda,0.1.25,conda-forge,['main'],conda,noarch/hesperos-0.1.29-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari <0.4.15', 'napari-plugin-engine', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scikit-learn', 'simpleitk', 'tifffile']",BSD-3-Clause,python,1666560471649.0,2022-10-23 21:31:01.483000+00:00,46a4998cb6470a58e3a780a7a28609c6,None,42717.0,conda-forge/hesperos/0.1.29/noarch/hesperos-0.1.29-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/hesperos/0.1.29/noarch/hesperos-0.1.29-pyhd8ed1ab_0.tar.bz2,conda,0.1.29,conda-forge,['main'],,hesperos.make_oneshot_segmentation_widget,Make OneShot Segmentation Widget,hesperos._oneshot_widget:OneShotWidget,,,,,,,hesperos.make_manual_segmentation_widget,Manual Segmentation or Correction,False,hesperos.make_oneshot_segmentation_widget,OneShot Segmentation,False,,,,,,,,,,,,,,,,,,,,0.1.30,conda-forge/hesperos/0.1.30,0.1.31,conda-forge/hesperos/0.1.31,0.1.32,conda-forge/hesperos/0.1.32,conda,noarch/hesperos-0.1.30-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['imageio-ffmpeg', 'napari <0.4.15', 'napari-plugin-engine', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scikit-learn', 'simpleitk', 'tifffile']",noarch,1666561453971.0,None-any-None,pyhd8ed1ab_0,2022-10-23 21:47:30.212000+00:00,3b4ffbfdfc3ecb7208e6c630b971cdf4,None,42940.0,conda-forge/hesperos/0.1.30/noarch/hesperos-0.1.30-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/hesperos/0.1.30/noarch/hesperos-0.1.30-pyhd8ed1ab_0.tar.bz2,conda,0.1.30,conda-forge,['main'],conda,noarch/hesperos-0.1.31-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['imageio-ffmpeg', 'napari <0.4.15', 'napari-plugin-engine', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scikit-learn', 'simpleitk', 'tifffile']",noarch,1666660398134.0,None-any-None,pyhd8ed1ab_0,2022-10-25 01:15:53.043000+00:00,4e7b5aa695f8fc4252032cf1f85b33ba,None,42845.0,conda-forge/hesperos/0.1.31/noarch/hesperos-0.1.31-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/hesperos/0.1.31/noarch/hesperos-0.1.31-pyhd8ed1ab_0.tar.bz2,conda,0.1.31,conda-forge,['main'],conda,noarch/hesperos-0.1.32-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['imageio-ffmpeg', 'napari <0.4.15', 'napari-plugin-engine', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scikit-learn', 'simpleitk', 'tifffile']",BSD-3-Clause,python,1666661107402.0,2022-10-25 01:27:33.337000+00:00,a4ce150dba889f106736916f61d3115b,None,42816.0,conda-forge/hesperos/0.1.32/noarch/hesperos-0.1.32-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/hesperos/0.1.32/noarch/hesperos-0.1.32-pyhd8ed1ab_0.tar.bz2,conda,0.1.32,conda-forge,['main'],,,,,,,0.1.33,conda-forge/hesperos/0.1.33,0.1.34,conda-forge/hesperos/0.1.34,conda,noarch/hesperos-0.1.33-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['imageio-ffmpeg', 'napari <0.4.15', 'napari-plugin-engine', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scikit-learn', 'simpleitk', 'tifffile']",noarch,1666661637222.0,None-any-None,pyhd8ed1ab_0,2022-10-25 01:36:25.885000+00:00,a8c4dc377a7c21271a272d96074e0161,None,42802.0,conda-forge/hesperos/0.1.33/noarch/hesperos-0.1.33-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/hesperos/0.1.33/noarch/hesperos-0.1.33-pyhd8ed1ab_0.tar.bz2,conda,0.1.33,conda-forge,['main'],conda,noarch/hesperos-0.1.34-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['imageio-ffmpeg', 'napari <0.4.15', 'napari-plugin-engine', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scikit-learn', 'simpleitk', 'tifffile']",BSD-3-Clause,python,1669398981168.0,2022-11-25 17:58:49.762000+00:00,8a4d2ce0dc327604cd655e3dbcefafd0,55724ac3537232f5b02e5f6ddd4ff2e73f760cebf71bfadf8fcdaa8f3f62c747,44505.0,conda-forge/hesperos/0.1.34/noarch/hesperos-0.1.34-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/hesperos/0.1.34/noarch/hesperos-0.1.34-pyhd8ed1ab_0.conda,conda,0.1.34,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,conda,noarch/hesperos-0.1.35-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['imageio-ffmpeg', 'napari <0.4.15', 'napari-plugin-engine', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scikit-learn', 'simpleitk', 'tifffile']",BSD-3-Clause,python,1669400031471.0,2022-11-25 18:16:19.601000+00:00,f482ecf2cf1a51e1521b4ce83d6d5ff6,17ec7193557f8a3663aa55a479a531768009b3f186d25fa681a1382ac77d0b55,44651.0,conda-forge/hesperos/0.1.35/noarch/hesperos-0.1.35-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/hesperos/0.1.35/noarch/hesperos-0.1.35-pyhd8ed1ab_0.conda,conda,0.1.35,conda-forge,['main'],conda,noarch/hesperos-0.1.39-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['imageio-ffmpeg', 'napari <0.4.15', 'napari-plugin-engine', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scikit-learn', 'scipy', 'simpleitk', 'tifffile']",BSD-3-Clause,python,1674501081591.0,2023-01-23 19:13:34.696000+00:00,75b88ed302873c2cf563a102d152391a,1afda7ae2ebb57c273dd667215cae7acd79faca94efc47577687422dd2036626,46029.0,conda-forge/hesperos/0.1.39/noarch/hesperos-0.1.39-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/hesperos/0.1.39/noarch/hesperos-0.1.39-pyhd8ed1ab_0.conda,conda,0.1.39,conda-forge,['main'],0.1.35,conda-forge/hesperos/0.1.35,conda,noarch/hesperos-0.1.42-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['imageio-ffmpeg', 'napari <0.4.15', 'napari-plugin-engine', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scikit-learn', 'scipy', 'simpleitk', 'tifffile']",BSD-3-Clause,1682249110947.0,2023-04-23 11:27:30.540000+00:00,de840436790df733d7a46fd7626d2017,e1bd5f74730fa67701a8cc41789775a5e44d940b9687d313a6b02106d1b05166,47498.0,conda-forge/hesperos/0.1.42/noarch/hesperos-0.1.42-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/hesperos/0.1.42/noarch/hesperos-0.1.42-pyhd8ed1ab_0.conda,conda,0.1.42,conda-forge,['main'],0.1.39,conda-forge/hesperos/0.1.39,conda,noarch/hesperos-0.2-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['imageio-ffmpeg', 'napari <0.4.15', 'napari-plugin-engine', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scikit-learn', 'scipy', 'simpleitk', 'tifffile']",BSD-3-Clause,1690310873171.0,2023-07-25 18:50:46.728000+00:00,55cf29e1e42f58cce733d128c0c73caa,09c73aacbb9d372a29121fa0ce678a691538188f3f1a299164f72cc3a2b14e91,54352.0,conda-forge/hesperos/0.2/noarch/hesperos-0.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/hesperos/0.2/noarch/hesperos-0.2-pyhd8ed1ab_0.conda,conda,0.2,conda-forge,['main'],conda,noarch/hesperos-0.2.1-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['imageio-ffmpeg', 'napari <0.4.15', 'napari-plugin-engine', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scikit-learn', 'scipy', 'simpleitk', 'tifffile']",BSD-3-Clause,2023-07-25 19:03:03.075000+00:00,a1f5d9bfe0fe63db6ae58331715331fe,3d6a61033eaf77596c7434732de16d2d061f2cbfc3749095eb07998e9d44fc7b,54724.0,conda-forge/hesperos/0.2.1/noarch/hesperos-0.2.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/hesperos/0.2.1/noarch/hesperos-0.2.1-pyhd8ed1ab_0.conda,conda,0.2.1,conda-forge,['main'],,, +46,hipocount-napari,0.0.1,hipocount-napari,Quantitative analysis of immunofluorescence images of hippocampal slices,Borys Olifirov,MIT,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,hipocount-napari.stack_process_widget,Preprocessing,hipocount_napari._widget:stack_process,,,,2.1,hipocount-napari,0.0.1,,Quantitative analysis of immunofluorescence images of hippocampal slices,"hipocount-napari ================ Quantitative analysis of immunofluorescence images of hippocampal slices -",text/markdown,,Borys Olifirov,omnia.fatum@gmail.com,MIT,"['Framework :: napari', 'Development Status :: 3 - Alpha', 'License :: OSI Approved :: MIT License', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Operating System :: OS Independent', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Image Recognition', 'Topic :: Utilities']",['napari'],>=3.8,"['Documentation, https://github.com/wisstock/hipocount-napari', 'Source Code, https://github.com/wisstock/hipocount-napari', 'Bug Tracker, https://github.com/wisstock/hipocount-napari/issues', 'User Support, https://github.com/wisstock/hipocount-napari/issues']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,hipocount-napari.pyramid_masking_widget,Pyramid layer masking,hipocount_napari._widget:pyramid_masking,hipocount-napari.astrocytes_masking_widget,Astrocytes masking,hipocount_napari._widget:astrocytes_masking,hipocount-napari.otsu_dots_masking_widget,GLT dots masking,hipocount_napari._widget:otsu_dots_masking,hipocount-napari.stack_process_widget,Preprocessing,False,hipocount-napari.pyramid_masking_widget,Pyramid layer masking,False,hipocount-napari.astrocytes_masking_widget,Astrocytes masking,False,hipocount-napari.otsu_dots_masking_widget,GLT dots masking,False,hipocount-napari.pyramid_glt_count_widget,GLT conunt in pyramid layer,hipocount_napari._widget:pyramid_glt_count,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,hipocount-napari.astro_glt_count_widget,GLT conunt in astrocytes,hipocount_napari._widget:astro_glt_count,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,hipocount-napari.pyramid_glt_count_widget,GLT conut in pyramid,False,hipocount-napari.astro_glt_count_widget,GLT conut in astrocytes,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -41,iacs-ipac-reader,0.0.13,iacs-ipac-reader,A reader plugin for read iacs/ipac images and export .rtdc files.,Chenqi Zhang,BSD-3-Clause,https://github.com/zcqwh/iacs_ipac_reader,62063d0b03b93eb2b194a111,['conda'],,https://github.com/zcqwh/iacs_ipac_reader,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/iacs-ipac-reader,http://api.anaconda.org/packages/conda-forge/iacs-ipac-reader,http://anaconda.org/conda-forge/iacs-ipac-reader,"['0.0.7', '0.0.13']",0.0.13,0.0.13,['noarch'],4.0,,['pyhd8ed1ab_0'],0.0.7,conda-forge/iacs-ipac-reader/0.0.7,1.0,0.0,2022-02-11 10:40:08.585000+00:00,2023-06-18 08:40:49.808000+00:00,conda,noarch/iacs-ipac-reader-0.0.7-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['h5py >=3.5.0', 'napari >=0.4.12', 'napari-plugin-engine >=0.2.0', 'numpy >=1.21.4', 'opencv >=4.4.0.42', 'pyqt >=5.12.3', 'python >=3.7']",noarch,1644575828455.0,None-any-None,pyhd8ed1ab_0,2022-02-11 10:40:09.257000+00:00,5b70cb0181468274b935cd7c4c9babd8,None,44273.0,conda-forge/iacs-ipac-reader/0.0.7/noarch/iacs-ipac-reader-0.0.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/iacs-ipac-reader/0.0.7/noarch/iacs-ipac-reader-0.0.7-pyhd8ed1ab_0.tar.bz2,conda,0.0.7,conda-forge,['main'],public,,0.2.1,iacs-ipac-reader.iacs_ipac_reader,iacs_ipac_reader,iacs_ipac_reader._dock_widget:iacs_ipac_reader,,,,2.1,iacs-ipac-reader,0.0.13,['UNKNOWN'],A reader plugin for read iacs/ipac images and export .rtdc files.,"# iacs_ipac_reader +",text/markdown,,Borys Olifirov,omnia.fatum@gmail.com,MIT,"['Framework :: napari', 'Development Status :: 3 - Alpha', 'License :: OSI Approved :: MIT License', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Operating System :: OS Independent', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Image Recognition', 'Topic :: Utilities']",['napari'],>=3.8,"['Documentation, https://github.com/wisstock/hipocount-napari', 'Source Code, https://github.com/wisstock/hipocount-napari', 'Bug Tracker, https://github.com/wisstock/hipocount-napari/issues', 'User Support, https://github.com/wisstock/hipocount-napari/issues']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,hipocount-napari.pyramid_masking_widget,Pyramid layer masking,hipocount_napari._widget:pyramid_masking,hipocount-napari.astrocytes_masking_widget,Astrocytes masking,hipocount_napari._widget:astrocytes_masking,hipocount-napari.otsu_dots_masking_widget,GLT dots masking,hipocount_napari._widget:otsu_dots_masking,hipocount-napari.stack_process_widget,Preprocessing,False,hipocount-napari.pyramid_masking_widget,Pyramid layer masking,False,hipocount-napari.astrocytes_masking_widget,Astrocytes masking,False,hipocount-napari.otsu_dots_masking_widget,GLT dots masking,False,hipocount-napari.pyramid_glt_count_widget,GLT conunt in pyramid layer,hipocount_napari._widget:pyramid_glt_count,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,hipocount-napari.astro_glt_count_widget,GLT conunt in astrocytes,hipocount_napari._widget:astro_glt_count,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,hipocount-napari.pyramid_glt_count_widget,GLT conut in pyramid,False,hipocount-napari.astro_glt_count_widget,GLT conut in astrocytes,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +47,iacs-ipac-reader,0.0.13,iacs-ipac-reader,A reader plugin for read iacs/ipac images and export .rtdc files.,Chenqi Zhang,BSD-3-Clause,https://github.com/zcqwh/iacs_ipac_reader,62063d0b03b93eb2b194a111,['conda'],,https://github.com/zcqwh/iacs_ipac_reader,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/iacs-ipac-reader,http://api.anaconda.org/packages/conda-forge/iacs-ipac-reader,http://anaconda.org/conda-forge/iacs-ipac-reader,"['0.0.7', '0.0.13']",0.0.13,0.0.13,['noarch'],4.0,,['pyhd8ed1ab_0'],0.0.7,conda-forge/iacs-ipac-reader/0.0.7,1.0,0.0,2022-02-11 10:40:08.585000+00:00,2023-06-18 08:40:49.808000+00:00,conda,noarch/iacs-ipac-reader-0.0.7-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['h5py >=3.5.0', 'napari >=0.4.12', 'napari-plugin-engine >=0.2.0', 'numpy >=1.21.4', 'opencv >=4.4.0.42', 'pyqt >=5.12.3', 'python >=3.7']",noarch,1644575828455.0,None-any-None,pyhd8ed1ab_0,2022-02-11 10:40:09.257000+00:00,5b70cb0181468274b935cd7c4c9babd8,None,44273.0,conda-forge/iacs-ipac-reader/0.0.7/noarch/iacs-ipac-reader-0.0.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/iacs-ipac-reader/0.0.7/noarch/iacs-ipac-reader-0.0.7-pyhd8ed1ab_0.tar.bz2,conda,0.0.7,conda-forge,['main'],public,,0.2.1,iacs-ipac-reader.iacs_ipac_reader,iacs_ipac_reader,iacs_ipac_reader._dock_widget:iacs_ipac_reader,,,,2.1,iacs-ipac-reader,0.0.13,['UNKNOWN'],A reader plugin for read iacs/ipac images and export .rtdc files.,"# iacs_ipac_reader [![License](https://img.shields.io/pypi/l/iacs_ipac_reader.svg?color=green)](https://github.com/zcqwh/iacs_ipac_reader/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/iacs_ipac_reader.svg?color=green)](https://pypi.org/project/iacs_ipac_reader) @@ -4412,8 +5068,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc -",text/markdown,https://github.com/zcqwh/iacs_ipac_reader,Chenqi Zhang,cqzhang@g.ecc.u-tokyo.ac.jp,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['h5py (>=3.5.0)', 'napari (>=0.4.12)', 'napari-plugin-engine (>=0.2.0)', 'numpy (>=1.21.4)', 'opencv-contrib-python-headless (>=4.4.0.46)', 'openpyxl (>=3.0.9)', 'sklearn (>=0.0)', 'PyQt5 (==5.12.3)', 'pandas (>=1.4.0)']",>=3.7,"['Bug Tracker, https://github.com/zcqwh/iacs_ipac_reader/issues', 'Documentation, https://github.com/zcqwh/iacs_ipac_reader#README.md', 'Source Code, https://github.com/zcqwh/iacs_ipac_reader', 'User Support, https://github.com/zcqwh/iacs_ipac_reader/issues']",,True,0.0.13,conda-forge/iacs-ipac-reader/0.0.13,,,,,conda,noarch/iacs-ipac-reader-0.0.13-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['h5py >=3.5.0', 'napari >=0.4.12', 'napari-plugin-engine >=0.2.0', 'numpy >=1.21.4', 'opencv >=4.4.0.42', 'pyqt >=5.12.3', 'python >=3.7']",pyhd8ed1ab_0,1649942642521.0,None-any-None,noarch,2022-04-14 13:26:36.914000+00:00,4ba2fb6917d46771a97d70d0a4dc3b76,None,61322.0,conda-forge/iacs-ipac-reader/0.0.13/noarch/iacs-ipac-reader-0.0.13-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/iacs-ipac-reader/0.0.13/noarch/iacs-ipac-reader-0.0.13-pyhd8ed1ab_0.tar.bz2,conda,0.0.13,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,iacs-ipac-reader.iacs_ipac_reader,iacs_ipac_reader,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -42,ilastik-napari,0.2.4,ilastik plugin for napari,ilastik plugin for napari,,MIT,,643db0bb2e917f0f9b5d391b,['conda'],,https://github.com/ilastik/ilastik-napari,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/ilastik-napari,http://api.anaconda.org/packages/conda-forge/ilastik-napari,http://anaconda.org/conda-forge/ilastik-napari,"['0.2.1', '0.2.2']",0.2.1,0.2.2,['noarch'],4.0,,['pyhd8ed1ab_0'],0.2.1,conda-forge/ilastik-napari/0.2.1,1.0,0.0,2023-04-17 20:48:57.107000+00:00,2023-07-25 18:44:22.490000+00:00,conda,noarch/ilastik-napari-0.2.1-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['napari', 'numpy >=1.20', 'python >=3.8', 'qtpy', 'scikit-learn', 'sparse']",noarch,1681764399155.0,None-any-None,pyhd8ed1ab_0,2023-04-17 20:48:57.629000+00:00,704518a32f3cb9ed2c87506b96350816,1b10648184a9838149c121a2b6d980f0934d95f3d4daa44eb96b206edd409270,14884.0,conda-forge/ilastik-napari/0.2.1/noarch/ilastik-napari-0.2.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/ilastik-napari/0.2.1/noarch/ilastik-napari-0.2.1-pyhd8ed1ab_0.conda,conda,0.2.1,conda-forge,['main'],public,,0.2.1,ilastik-napari.pixel_classification,Open ilastik Pixel Classification Widget,ilastik.napari.plugin:PixelClassificationWidget,,,,2.1,ilastik-napari,0.2.4,,ilastik plugin for napari,"# ilastik-napari +",text/markdown,https://github.com/zcqwh/iacs_ipac_reader,Chenqi Zhang,cqzhang@g.ecc.u-tokyo.ac.jp,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['h5py (>=3.5.0)', 'napari (>=0.4.12)', 'napari-plugin-engine (>=0.2.0)', 'numpy (>=1.21.4)', 'opencv-contrib-python-headless (>=4.4.0.46)', 'openpyxl (>=3.0.9)', 'sklearn (>=0.0)', 'PyQt5 (==5.12.3)', 'pandas (>=1.4.0)']",>=3.7,"['Bug Tracker, https://github.com/zcqwh/iacs_ipac_reader/issues', 'Documentation, https://github.com/zcqwh/iacs_ipac_reader#README.md', 'Source Code, https://github.com/zcqwh/iacs_ipac_reader', 'User Support, https://github.com/zcqwh/iacs_ipac_reader/issues']",,True,0.0.13,conda-forge/iacs-ipac-reader/0.0.13,,,,,conda,noarch/iacs-ipac-reader-0.0.13-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['h5py >=3.5.0', 'napari >=0.4.12', 'napari-plugin-engine >=0.2.0', 'numpy >=1.21.4', 'opencv >=4.4.0.42', 'pyqt >=5.12.3', 'python >=3.7']",pyhd8ed1ab_0,1649942642521.0,None-any-None,noarch,2022-04-14 13:26:36.914000+00:00,4ba2fb6917d46771a97d70d0a4dc3b76,None,61322.0,conda-forge/iacs-ipac-reader/0.0.13/noarch/iacs-ipac-reader-0.0.13-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/iacs-ipac-reader/0.0.13/noarch/iacs-ipac-reader-0.0.13-pyhd8ed1ab_0.tar.bz2,conda,0.0.13,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,iacs-ipac-reader.iacs_ipac_reader,iacs_ipac_reader,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +48,ilastik-napari,0.2.4,ilastik plugin for napari,ilastik plugin for napari,,MIT,,643db0bb2e917f0f9b5d391b,['conda'],,https://github.com/ilastik/ilastik-napari,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/ilastik-napari,http://api.anaconda.org/packages/conda-forge/ilastik-napari,http://anaconda.org/conda-forge/ilastik-napari,"['0.2.1', '0.2.2']",0.2.1,0.2.2,['noarch'],4.0,,['pyhd8ed1ab_0'],0.2.1,conda-forge/ilastik-napari/0.2.1,1.0,0.0,2023-04-17 20:48:57.107000+00:00,2023-07-25 18:44:22.490000+00:00,conda,noarch/ilastik-napari-0.2.1-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['napari', 'numpy >=1.20', 'python >=3.8', 'qtpy', 'scikit-learn', 'sparse']",noarch,1681764399155.0,None-any-None,pyhd8ed1ab_0,2023-04-17 20:48:57.629000+00:00,704518a32f3cb9ed2c87506b96350816,1b10648184a9838149c121a2b6d980f0934d95f3d4daa44eb96b206edd409270,14884.0,conda-forge/ilastik-napari/0.2.1/noarch/ilastik-napari-0.2.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/ilastik-napari/0.2.1/noarch/ilastik-napari-0.2.1-pyhd8ed1ab_0.conda,conda,0.2.1,conda-forge,['main'],public,,0.2.1,ilastik-napari.pixel_classification,Open ilastik Pixel Classification Widget,ilastik.napari.plugin:PixelClassificationWidget,,,,2.1,ilastik-napari,0.2.4,,ilastik plugin for napari,"# ilastik-napari [Napari][napari] plugin for interactive pixel classification. Designed to be similar to the pixel classification workflow in [classic ilastik][ilastik]. @@ -4513,8 +5169,8 @@ python -m twine upload --repository testpypi dist/* [mambaforge]: https://github.com/conda-forge/miniforge#mambaforge [napari-quickstart]: https://napari.org/tutorials/fundamentals/quick_start.html [napari-pyqt]: https://napari.org/stable/plugins/best_practices.html#don-t-include-pyside2-or-pyqt5-in-your-plugin-s-dependencies -",text/markdown,,,Emil Melnikov ,MIT,"['Development Status :: 2 - Pre-Alpha', 'Environment :: Plugins', 'Intended Audience :: End Users/Desktop', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: MIT License', 'Framework :: napari', 'Operating System :: MacOS', 'Operating System :: MacOS :: MacOS X', 'Operating System :: Microsoft :: Windows', 'Operating System :: POSIX', 'Operating System :: POSIX :: Linux', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: Implementation :: CPython', 'Topic :: Scientific/Engineering', 'Topic :: Scientific/Engineering :: Image Processing']","['napari >=0.4.13', 'numpy >=1.20', 'qtpy', 'scikit-learn', 'sparse']",>=3.8,"['homepage, https://github.com/ilastik/ilastik-napari']",,False,0.2.2,conda-forge/ilastik-napari/0.2.2,,,,,conda,noarch/ilastik-napari-0.2.2-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['napari', 'numpy >=1.20', 'python >=3.8', 'qtpy', 'scikit-learn', 'sparse']",pyhd8ed1ab_0,1690310553479.0,None-any-None,noarch,2023-07-25 18:44:21.110000+00:00,2647dfd83812c17ef7f914b03f28b952,d216900e68363b1e027450eb820a0fee36e1c200f5806a5454d1a44661f2c032,14949.0,conda-forge/ilastik-napari/0.2.2/noarch/ilastik-napari-0.2.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/ilastik-napari/0.2.2/noarch/ilastik-napari-0.2.2-pyhd8ed1ab_0.conda,conda,0.2.2,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ilastik-napari.pixel_classification,ilastik Pixel Classification,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -43,Image-Composer,0.0.19,Image-Composer,A napari plugin in order to compose a background image with a foreground image,"Marc Boucsein, Robin Koch",BSD-3,https://github.com/MBPhys/Image-Composer,62050752061d72975e2e25eb,['conda'],,https://github.com/MBPhys/Image-Composer,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/image-composer,http://api.anaconda.org/packages/conda-forge/image-composer,http://anaconda.org/conda-forge/image-composer,['0.0.19'],0.0.19,0.0.19,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.19,conda-forge/image-composer/0.0.19,1.0,0.0,2022-02-10 12:38:39.821000+00:00,2023-06-18 08:40:49.031000+00:00,conda,noarch/image-composer-0.0.19-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7']",noarch,1644496556981.0,None-any-None,pyhd8ed1ab_0,2022-02-10 12:38:40.102000+00:00,62f8936b653ccb4a19963b1f67f28f58,None,8510.0,conda-forge/image-composer/0.0.19/noarch/image-composer-0.0.19-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/image-composer/0.0.19/noarch/image-composer-0.0.19-pyhd8ed1ab_0.tar.bz2,conda,0.0.19,conda-forge,['main'],public,,0.2.1,Image-Composer.Composer,Composer,Image_Composer.image_compose:Composer,,,,2.1,Image-Composer,0.0.19,['UNKNOWN'],A napari plugin in order to compose a background image with a foreground image,"# Image-Composer +",text/markdown,,,Emil Melnikov ,MIT,"['Development Status :: 2 - Pre-Alpha', 'Environment :: Plugins', 'Intended Audience :: End Users/Desktop', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: MIT License', 'Framework :: napari', 'Operating System :: MacOS', 'Operating System :: MacOS :: MacOS X', 'Operating System :: Microsoft :: Windows', 'Operating System :: POSIX', 'Operating System :: POSIX :: Linux', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: Implementation :: CPython', 'Topic :: Scientific/Engineering', 'Topic :: Scientific/Engineering :: Image Processing']","['napari >=0.4.13', 'numpy >=1.20', 'qtpy', 'scikit-learn', 'sparse']",>=3.8,"['homepage, https://github.com/ilastik/ilastik-napari']",,False,0.2.2,conda-forge/ilastik-napari/0.2.2,,,,,conda,noarch/ilastik-napari-0.2.2-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['napari', 'numpy >=1.20', 'python >=3.8', 'qtpy', 'scikit-learn', 'sparse']",pyhd8ed1ab_0,1690310553479.0,None-any-None,noarch,2023-07-25 18:44:21.110000+00:00,2647dfd83812c17ef7f914b03f28b952,d216900e68363b1e027450eb820a0fee36e1c200f5806a5454d1a44661f2c032,14949.0,conda-forge/ilastik-napari/0.2.2/noarch/ilastik-napari-0.2.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/ilastik-napari/0.2.2/noarch/ilastik-napari-0.2.2-pyhd8ed1ab_0.conda,conda,0.2.2,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ilastik-napari.pixel_classification,ilastik Pixel Classification,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +49,Image-Composer,0.0.19,Image-Composer,A napari plugin in order to compose a background image with a foreground image,"Marc Boucsein, Robin Koch",BSD-3,https://github.com/MBPhys/Image-Composer,62050752061d72975e2e25eb,['conda'],,https://github.com/MBPhys/Image-Composer,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/image-composer,http://api.anaconda.org/packages/conda-forge/image-composer,http://anaconda.org/conda-forge/image-composer,['0.0.19'],0.0.19,0.0.19,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.19,conda-forge/image-composer/0.0.19,1.0,0.0,2022-02-10 12:38:39.821000+00:00,2023-06-18 08:40:49.031000+00:00,conda,noarch/image-composer-0.0.19-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7']",noarch,1644496556981.0,None-any-None,pyhd8ed1ab_0,2022-02-10 12:38:40.102000+00:00,62f8936b653ccb4a19963b1f67f28f58,None,8510.0,conda-forge/image-composer/0.0.19/noarch/image-composer-0.0.19-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/image-composer/0.0.19/noarch/image-composer-0.0.19-pyhd8ed1ab_0.tar.bz2,conda,0.0.19,conda-forge,['main'],public,,0.2.1,Image-Composer.Composer,Composer,Image_Composer.image_compose:Composer,,,,2.1,Image-Composer,0.0.19,['UNKNOWN'],A napari plugin in order to compose a background image with a foreground image,"# Image-Composer [![License](https://img.shields.io/pypi/l/napari-medical-image-formats.svg?color=green)](https://github.com/MBPhys/Image-Composer/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/Image-Composer.svg?color=green)](https://pypi.org/project/Image-Composer) @@ -4562,8 +5218,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/MBPhys/Image-Composer,"Marc Boucsein, Robin Koch",,BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy']",>=3.7,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Image-Composer.Composer,Composer,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -44,Image-Part-Selecter,0.0.7,Image-Part-Selecter,A napari plugin in order to select parts of images,"Marc Boucsein, Robin Koch",BSD-3,https://github.com/MBPhys/Image-Part-Selecter,620630b3414b5ba20e25785a,['conda'],,https://github.com/MBPhys/Image-Part-Selecter,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/image-part-selecter,http://api.anaconda.org/packages/conda-forge/image-part-selecter,http://anaconda.org/conda-forge/image-part-selecter,['0.0.7'],0.0.7,0.0.7,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.7,conda-forge/image-part-selecter/0.0.7,1.0,0.0,2022-02-11 09:47:29.325000+00:00,2023-06-18 08:40:49.724000+00:00,conda,noarch/image-part-selecter-0.0.7-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7']",noarch,1644572705242.0,None-any-None,pyhd8ed1ab_0,2022-02-11 09:47:29.816000+00:00,131000841c887350c5b6b06efe2c0614,None,8542.0,conda-forge/image-part-selecter/0.0.7/noarch/image-part-selecter-0.0.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/image-part-selecter/0.0.7/noarch/image-part-selecter-0.0.7-pyhd8ed1ab_0.tar.bz2,conda,0.0.7,conda-forge,['main'],public,,0.2.1,Image-Part-Selecter.Selecter,Selecter,Image_Part_Selecter.image_select:Selecter,,,,2.1,Image-Part-Selecter,0.0.7,['UNKNOWN'],A napari plugin in order to select parts of images,"# Image-Part-Selecter +",text/markdown,https://github.com/MBPhys/Image-Composer,"Marc Boucsein, Robin Koch",,BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy']",>=3.7,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Image-Composer.Composer,Composer,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +50,Image-Part-Selecter,0.0.7,Image-Part-Selecter,A napari plugin in order to select parts of images,"Marc Boucsein, Robin Koch",BSD-3,https://github.com/MBPhys/Image-Part-Selecter,620630b3414b5ba20e25785a,['conda'],,https://github.com/MBPhys/Image-Part-Selecter,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/image-part-selecter,http://api.anaconda.org/packages/conda-forge/image-part-selecter,http://anaconda.org/conda-forge/image-part-selecter,['0.0.7'],0.0.7,0.0.7,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.7,conda-forge/image-part-selecter/0.0.7,1.0,0.0,2022-02-11 09:47:29.325000+00:00,2023-06-18 08:40:49.724000+00:00,conda,noarch/image-part-selecter-0.0.7-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7']",noarch,1644572705242.0,None-any-None,pyhd8ed1ab_0,2022-02-11 09:47:29.816000+00:00,131000841c887350c5b6b06efe2c0614,None,8542.0,conda-forge/image-part-selecter/0.0.7/noarch/image-part-selecter-0.0.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/image-part-selecter/0.0.7/noarch/image-part-selecter-0.0.7-pyhd8ed1ab_0.tar.bz2,conda,0.0.7,conda-forge,['main'],public,,0.2.1,Image-Part-Selecter.Selecter,Selecter,Image_Part_Selecter.image_select:Selecter,,,,2.1,Image-Part-Selecter,0.0.7,['UNKNOWN'],A napari plugin in order to select parts of images,"# Image-Part-Selecter [![License](https://img.shields.io/pypi/l/napari-medical-image-formats.svg?color=green)](https://github.com/MBPhys/Image-Part-Selecter/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/Image-Part-Selecter.svg?color=green)](https://pypi.org/project/Image-Part-Selecter) @@ -4611,8 +5267,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/MBPhys/Image-Part-Selecter,"Marc Boucsein, Robin Koch",,BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy']",>=3.7,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Image-Part-Selecter.Selecter,Selecter,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -45,imaxt-multiscale-plugin,0.3.1,IMAXT Multiscale Image Napari Plugin,A simple plugin to use with napari,Eduardo Gonzalez Solares,LGPL-3.0-only,https://gitlab.developers.cam.ac.uk/astronomy/camcead/imaxt/imaxt-multiscale-plugin,643d82f8f844c85bdd89e369,['conda'],,https://gitlab.developers.cam.ac.uk/astronomy/camcead/imaxt/imaxt-multiscale-plugin,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/imaxt-multiscale-plugin,http://api.anaconda.org/packages/conda-forge/imaxt-multiscale-plugin,http://anaconda.org/conda-forge/imaxt-multiscale-plugin,"['0.2.2', '0.2.4', '0.3.1']",0.2.2,0.3.1,['noarch'],5.0,,"['pyh9208f05_0', 'pyhd8ed1ab_0']",0.2.2,conda-forge/imaxt-multiscale-plugin/0.2.2,1.0,0.0,2023-04-17 17:33:42.335000+00:00,2023-07-25 18:11:34.019000+00:00,conda,noarch/imaxt-multiscale-plugin-0.2.2-pyhd8ed1ab_0.conda,0.0,LGPL-3.0-or-later,False,python,"['dask-core', 'imaxt-image', 'magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'xarray']",noarch,1681752692194.0,None-any-None,pyhd8ed1ab_0,2023-04-17 17:33:42.626000+00:00,9dcbceebf8a5ed72ed78ecad5bdac09d,3079362087f429302f56572f75a1dfa166cdc75f7456ad6f5f5b839c9e1050e7,16754.0,conda-forge/imaxt-multiscale-plugin/0.2.2/noarch/imaxt-multiscale-plugin-0.2.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/imaxt-multiscale-plugin/0.2.2/noarch/imaxt-multiscale-plugin-0.2.2-pyhd8ed1ab_0.conda,conda,0.2.2,conda-forge,['main'],public,,0.2.1,imaxt-multiscale-plugin.get_reader,Open data with IMAXT Multiscale Image Napari Plugin,imaxt_multiscale_plugin._reader:napari_get_reader,imaxt-multiscale-plugin.get_reader,['*'],True,2.1,imaxt-multiscale-plugin,0.3.1,,A simple plugin to use with napari,"# IMAXT multiscale napari plugin +",text/markdown,https://github.com/MBPhys/Image-Part-Selecter,"Marc Boucsein, Robin Koch",,BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy']",>=3.7,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Image-Part-Selecter.Selecter,Selecter,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +51,imaxt-multiscale-plugin,0.3.1,IMAXT Multiscale Image Napari Plugin,A simple plugin to use with napari,Eduardo Gonzalez Solares,LGPL-3.0-only,https://gitlab.developers.cam.ac.uk/astronomy/camcead/imaxt/imaxt-multiscale-plugin,643d82f8f844c85bdd89e369,['conda'],,https://gitlab.developers.cam.ac.uk/astronomy/camcead/imaxt/imaxt-multiscale-plugin,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/imaxt-multiscale-plugin,http://api.anaconda.org/packages/conda-forge/imaxt-multiscale-plugin,http://anaconda.org/conda-forge/imaxt-multiscale-plugin,"['0.2.2', '0.2.4', '0.3.1']",0.2.2,0.3.1,['noarch'],5.0,,"['pyh9208f05_0', 'pyhd8ed1ab_0']",0.2.2,conda-forge/imaxt-multiscale-plugin/0.2.2,1.0,0.0,2023-04-17 17:33:42.335000+00:00,2023-07-25 18:11:34.019000+00:00,conda,noarch/imaxt-multiscale-plugin-0.2.2-pyhd8ed1ab_0.conda,0.0,LGPL-3.0-or-later,False,python,"['dask-core', 'imaxt-image', 'magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'xarray']",noarch,1681752692194.0,None-any-None,pyhd8ed1ab_0,2023-04-17 17:33:42.626000+00:00,9dcbceebf8a5ed72ed78ecad5bdac09d,3079362087f429302f56572f75a1dfa166cdc75f7456ad6f5f5b839c9e1050e7,16754.0,conda-forge/imaxt-multiscale-plugin/0.2.2/noarch/imaxt-multiscale-plugin-0.2.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/imaxt-multiscale-plugin/0.2.2/noarch/imaxt-multiscale-plugin-0.2.2-pyhd8ed1ab_0.conda,conda,0.2.2,conda-forge,['main'],public,,0.2.1,imaxt-multiscale-plugin.get_reader,Open data with IMAXT Multiscale Image Napari Plugin,imaxt_multiscale_plugin._reader:napari_get_reader,imaxt-multiscale-plugin.get_reader,['*'],True,2.1,imaxt-multiscale-plugin,0.3.1,,A simple plugin to use with napari,"# IMAXT multiscale napari plugin [![License GNU LGPL v3.0](https://img.shields.io/pypi/l/imaxt-multiscale-plugin.svg?color=green)](https://github.com/eg266/imaxt-multiscale-plugin/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/imaxt-multiscale-plugin.svg?color=green)](https://pypi.org/project/imaxt-multiscale-plugin) @@ -4676,8 +5332,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://gitlab.developers.cam.ac.uk/astronomy/camcead/imaxt/imaxt-multiscale-plugin,Eduardo Gonzalez Solares,E.GonzalezSolares@ast.cam.ac.uk,LGPL-3.0-only,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU Lesser General Public License v3 (LGPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['numpy', 'magicgui', 'qtpy', 'xarray', 'dask', 'astropy', 'zarr', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,,['testing'],False,0.2.4,conda-forge/imaxt-multiscale-plugin/0.2.4,0.3.1,conda-forge/imaxt-multiscale-plugin/0.3.1,,,conda,noarch/imaxt-multiscale-plugin-0.2.4-pyhd8ed1ab_0.conda,0.0,LGPL-3.0-or-later,False,python,"['astropy', 'dask-core', 'imageio', 'imaxt-image', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'xarray', 'zarr']",pyhd8ed1ab_0,1690307877334.0,None-any-None,noarch,2023-07-25 18:00:10.898000+00:00,1e54c27717aa7b1f738b959c48442adb,4a1cdd2848eece5ef9646f8329eb8e105ae7f20e4dd56c4f06f61c772bb1996c,17106.0,conda-forge/imaxt-multiscale-plugin/0.2.4/noarch/imaxt-multiscale-plugin-0.2.4-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/imaxt-multiscale-plugin/0.2.4/noarch/imaxt-multiscale-plugin-0.2.4-pyhd8ed1ab_0.conda,conda,0.2.4,conda-forge,['main'],conda,noarch/imaxt-multiscale-plugin-0.3.1-pyh9208f05_0.conda,0.0,LGPL-3.0-or-later,False,python,"['astropy', 'dask-core', 'imageio', 'imaxt-image', 'napari', 'numpy', 'python >=3.8', 'qtpy', 's3fs', 'xarray', 'zarr']",noarch,1690308550689.0,None-any-None,pyh9208f05_0,2023-07-25 18:11:31.982000+00:00,2fd51e3f1898cb2429e49a37c1cf4019,e1c5d55e4fee423ed130392560127dad3d697d97d3ba6adf104409224f842a07,17660.0,conda-forge/imaxt-multiscale-plugin/0.3.1/noarch/imaxt-multiscale-plugin-0.3.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/imaxt-multiscale-plugin/0.3.1/noarch/imaxt-multiscale-plugin-0.3.1-pyh9208f05_0.conda,conda,0.3.1,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,imaxt-multiscale-plugin.write_multiple,Save multi-layer data with IMAXT Multiscale Image Napari Plugin,imaxt_multiscale_plugin._writer:write_multiple,imaxt-multiscale-plugin.write_single_image,Save image data with IMAXT Multiscale Image Napari Plugin,imaxt_multiscale_plugin._writer:write_single_image,imaxt-multiscale-plugin.write_screenshot,Save Screenshot,imaxt_multiscale_plugin._writer:write_screenshot,imaxt-multiscale-plugin.make_qwidget,Utilities Widget,False,,,,,,,,,,imaxt-multiscale-plugin.make_qwidget,Utilities Widget,imaxt_multiscale_plugin._widget:UtilsQWidget,imaxt-multiscale-plugin.write_single_image,['image'],,imaxt-multiscale-plugin.write_screenshot,"['image*', 'labels*']","['.tif', '.tiff']",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['.npy'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -46,in-silico-fate-mapping,0.1.2,In Silico Fate Mapping,TODO,Jordao Bragantini,BSD-3-Clause,https://github.com/royerlab/in-silico-fate-mapping,64c93df2b81a1580dac581e1,['conda'],,https://github.com/royerlab/in-silico-fate-mapping,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/in-silico-fate-mapping,http://api.anaconda.org/packages/conda-forge/in-silico-fate-mapping,http://anaconda.org/conda-forge/in-silico-fate-mapping,"['0.1.1', '0.1.2']",0.1.2,0.1.2,['noarch'],7.0,,['pyh9208f05_0'],0.1.1,conda-forge/in-silico-fate-mapping/0.1.1,1.0,0.0,2023-08-01 17:16:30.182000+00:00,2024-04-10 22:11:45.268000+00:00,conda,noarch/in-silico-fate-mapping-0.1.1-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['click', 'magicgui', 'napari', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-learn', 'zarr']",noarch,1690910043052.0,None-any-None,pyh9208f05_0,2023-08-01 17:16:31.250000+00:00,a479a51768da54ed2a53e86c07b9814d,c070ddd337a42feb0a896bdae030ed217d9a0151676737e5a7bddab47285c2c9,23745.0,conda-forge/in-silico-fate-mapping/0.1.1/noarch/in-silico-fate-mapping-0.1.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/in-silico-fate-mapping/0.1.1/noarch/in-silico-fate-mapping-0.1.1-pyh9208f05_0.conda,conda,0.1.1,conda-forge,['main'],public,,0.2.1,in-silico-fate-mapping.get_reader,Open .csv tracking data,in_silico_fate_mapping._reader:napari_get_reader,in-silico-fate-mapping.get_reader,['*.csv'],False,2.1,in-silico-fate-mapping,0.1.2,,TODO,"# in silico fate mapping +",text/markdown,https://gitlab.developers.cam.ac.uk/astronomy/camcead/imaxt/imaxt-multiscale-plugin,Eduardo Gonzalez Solares,E.GonzalezSolares@ast.cam.ac.uk,LGPL-3.0-only,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU Lesser General Public License v3 (LGPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['numpy', 'magicgui', 'qtpy', 'xarray', 'dask', 'astropy', 'zarr', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,,['testing'],False,0.2.4,conda-forge/imaxt-multiscale-plugin/0.2.4,0.3.1,conda-forge/imaxt-multiscale-plugin/0.3.1,,,conda,noarch/imaxt-multiscale-plugin-0.2.4-pyhd8ed1ab_0.conda,0.0,LGPL-3.0-or-later,False,python,"['astropy', 'dask-core', 'imageio', 'imaxt-image', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'xarray', 'zarr']",pyhd8ed1ab_0,1690307877334.0,None-any-None,noarch,2023-07-25 18:00:10.898000+00:00,1e54c27717aa7b1f738b959c48442adb,4a1cdd2848eece5ef9646f8329eb8e105ae7f20e4dd56c4f06f61c772bb1996c,17106.0,conda-forge/imaxt-multiscale-plugin/0.2.4/noarch/imaxt-multiscale-plugin-0.2.4-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/imaxt-multiscale-plugin/0.2.4/noarch/imaxt-multiscale-plugin-0.2.4-pyhd8ed1ab_0.conda,conda,0.2.4,conda-forge,['main'],conda,noarch/imaxt-multiscale-plugin-0.3.1-pyh9208f05_0.conda,0.0,LGPL-3.0-or-later,False,python,"['astropy', 'dask-core', 'imageio', 'imaxt-image', 'napari', 'numpy', 'python >=3.8', 'qtpy', 's3fs', 'xarray', 'zarr']",noarch,1690308550689.0,None-any-None,pyh9208f05_0,2023-07-25 18:11:31.982000+00:00,2fd51e3f1898cb2429e49a37c1cf4019,e1c5d55e4fee423ed130392560127dad3d697d97d3ba6adf104409224f842a07,17660.0,conda-forge/imaxt-multiscale-plugin/0.3.1/noarch/imaxt-multiscale-plugin-0.3.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/imaxt-multiscale-plugin/0.3.1/noarch/imaxt-multiscale-plugin-0.3.1-pyh9208f05_0.conda,conda,0.3.1,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,imaxt-multiscale-plugin.write_multiple,Save multi-layer data with IMAXT Multiscale Image Napari Plugin,imaxt_multiscale_plugin._writer:write_multiple,imaxt-multiscale-plugin.write_single_image,Save image data with IMAXT Multiscale Image Napari Plugin,imaxt_multiscale_plugin._writer:write_single_image,imaxt-multiscale-plugin.write_screenshot,Save Screenshot,imaxt_multiscale_plugin._writer:write_screenshot,imaxt-multiscale-plugin.make_qwidget,Utilities Widget,False,,,,,,,,,,imaxt-multiscale-plugin.make_qwidget,Utilities Widget,imaxt_multiscale_plugin._widget:UtilsQWidget,imaxt-multiscale-plugin.write_single_image,['image'],,imaxt-multiscale-plugin.write_screenshot,"['image*', 'labels*']","['.tif', '.tiff']",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['.npy'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +52,in-silico-fate-mapping,0.1.2,In Silico Fate Mapping,TODO,Jordao Bragantini,BSD-3-Clause,https://github.com/royerlab/in-silico-fate-mapping,64c93df2b81a1580dac581e1,['conda'],,https://github.com/royerlab/in-silico-fate-mapping,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/in-silico-fate-mapping,http://api.anaconda.org/packages/conda-forge/in-silico-fate-mapping,http://anaconda.org/conda-forge/in-silico-fate-mapping,"['0.1.1', '0.1.2']",0.1.2,0.1.2,['noarch'],7.0,,['pyh9208f05_0'],0.1.1,conda-forge/in-silico-fate-mapping/0.1.1,1.0,0.0,2023-08-01 17:16:30.182000+00:00,2024-04-10 22:11:45.268000+00:00,conda,noarch/in-silico-fate-mapping-0.1.1-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['click', 'magicgui', 'napari', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-learn', 'zarr']",noarch,1690910043052.0,None-any-None,pyh9208f05_0,2023-08-01 17:16:31.250000+00:00,a479a51768da54ed2a53e86c07b9814d,c070ddd337a42feb0a896bdae030ed217d9a0151676737e5a7bddab47285c2c9,23745.0,conda-forge/in-silico-fate-mapping/0.1.1/noarch/in-silico-fate-mapping-0.1.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/in-silico-fate-mapping/0.1.1/noarch/in-silico-fate-mapping-0.1.1-pyh9208f05_0.conda,conda,0.1.1,conda-forge,['main'],public,,0.2.1,in-silico-fate-mapping.get_reader,Open .csv tracking data,in_silico_fate_mapping._reader:napari_get_reader,in-silico-fate-mapping.get_reader,['*.csv'],False,2.1,in-silico-fate-mapping,0.1.2,,TODO,"# in silico fate mapping [![License BSD-3](https://img.shields.io/pypi/l/in-silico-fate-mapping.svg?color=green)](https://github.com/royerlab/in-silico-fate-mapping/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/in-silico-fate-mapping.svg?color=green)](https://pypi.org/project/in-silico-fate-mapping) @@ -4807,8 +5463,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/royerlab/in-silico-fate-mapping,Jordao Bragantini,jordao.bragantini@czbiohub.org,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'pandas', 'scikit-learn', 'zarr', 'magicgui', 'qtpy', 'napari', 'click', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/royerlab/in-silico-fate-mapping/issues', 'Documentation, https://github.com/royerlab/in-silico-fate-mapping#README.md', 'Source Code, https://github.com/royerlab/in-silico-fate-mapping', 'User Support, https://github.com/royerlab/in-silico-fate-mapping/issues']",['testing'],False,0.1.2,conda-forge/in-silico-fate-mapping/0.1.2,,,,,conda,noarch/in-silico-fate-mapping-0.1.2-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['click', 'magicgui', 'napari', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-learn', 'zarr']",pyh9208f05_0,1712786967536.0,None-any-None,noarch,2024-04-10 22:11:43.302000+00:00,07b35b0bb3c98fb4944e04f5e356e48b,481e3fe7757a2c1c27c3448dcb617ea3d2079d213f811dd9171274b266c1f1bc,24097.0,conda-forge/in-silico-fate-mapping/0.1.2/noarch/in-silico-fate-mapping-0.1.2-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/in-silico-fate-mapping/0.1.2/noarch/in-silico-fate-mapping-0.1.2-pyh9208f05_0.conda,conda,0.1.2,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,in-silico-fate-mapping.write_tracks,Write tracking data to .csv,in_silico_fate_mapping._writer:napari_write_tracks,in-silico-fate-mapping.make_fate_map,Fate Mapping,in_silico_fate_mapping._widget:FateMappingWidget,,,,in-silico-fate-mapping.make_fate_map,Fate Mapping,False,,,,,,,,,,,,,in-silico-fate-mapping.write_tracks,['tracks'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['.csv'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -47,iterseg,0.3.0,iterseg,napari plugin for iteratively improving unet-watershed segmentation,Abigail S McGovern & Juan Nunez-Iglesias,BSD-3-Clause,https://github.com/abigailmcgovern/iterseg,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.1.0,iterseg.train_from_viewer,Create train_from_viewer,iterseg._dock_widgets:train_from_viewer,iterseg.load_ome_zarr,['*.ome.zarr'],True,2.1,iterseg,0.3.0,,napari plugin for iteratively improving unet-watershed segmentation,"# iterseg +",text/markdown,https://github.com/royerlab/in-silico-fate-mapping,Jordao Bragantini,jordao.bragantini@czbiohub.org,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'pandas', 'scikit-learn', 'zarr', 'magicgui', 'qtpy', 'napari', 'click', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/royerlab/in-silico-fate-mapping/issues', 'Documentation, https://github.com/royerlab/in-silico-fate-mapping#README.md', 'Source Code, https://github.com/royerlab/in-silico-fate-mapping', 'User Support, https://github.com/royerlab/in-silico-fate-mapping/issues']",['testing'],False,0.1.2,conda-forge/in-silico-fate-mapping/0.1.2,,,,,conda,noarch/in-silico-fate-mapping-0.1.2-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['click', 'magicgui', 'napari', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-learn', 'zarr']",pyh9208f05_0,1712786967536.0,None-any-None,noarch,2024-04-10 22:11:43.302000+00:00,07b35b0bb3c98fb4944e04f5e356e48b,481e3fe7757a2c1c27c3448dcb617ea3d2079d213f811dd9171274b266c1f1bc,24097.0,conda-forge/in-silico-fate-mapping/0.1.2/noarch/in-silico-fate-mapping-0.1.2-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/in-silico-fate-mapping/0.1.2/noarch/in-silico-fate-mapping-0.1.2-pyh9208f05_0.conda,conda,0.1.2,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,in-silico-fate-mapping.write_tracks,Write tracking data to .csv,in_silico_fate_mapping._writer:napari_write_tracks,in-silico-fate-mapping.make_fate_map,Fate Mapping,in_silico_fate_mapping._widget:FateMappingWidget,,,,in-silico-fate-mapping.make_fate_map,Fate Mapping,False,,,,,,,,,,,,,in-silico-fate-mapping.write_tracks,['tracks'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['.csv'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +53,iterseg,0.3.0,iterseg,napari plugin for iteratively improving unet-watershed segmentation,Abigail S McGovern & Juan Nunez-Iglesias,BSD-3-Clause,https://github.com/abigailmcgovern/iterseg,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.1.0,iterseg.train_from_viewer,Create train_from_viewer,iterseg._dock_widgets:train_from_viewer,iterseg.load_ome_zarr,['*.ome.zarr'],True,2.1,iterseg,0.3.0,,napari plugin for iteratively improving unet-watershed segmentation,"# iterseg [![License](https://img.shields.io/pypi/l/iterseg.svg?color=green)](https://github.com/abigailmcgovern/iterseg/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/iterseg.svg?color=green)](https://pypi.org/project/iterseg) @@ -4944,8 +5600,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/abigailmcgovern/iterseg,Abigail S McGovern & Juan Nunez-Iglesias,Abigail.McGovern1@monash.edu,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['numpy', 'dask', 'torch', 'scikit-image', 'pandas', 'ome-zarr', 'zarr', 'matplotlib', 'napari', 'umetrix', 'numba', 'scipy', 'seaborn']",>=3.7,"['Bug Tracker, https://github.com/abigailmcgovern/iterseg/issues', 'Documentation, https://github.com/abigailmcgovern/iterseg#README.md', 'Source Code, https://github.com/abigailmcgovern/iterseg', 'User Support, https://github.com/abigailmcgovern/iterseg/issues']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,iterseg.load_data,Create load_data,iterseg._dock_widgets:load_data,iterseg.assess_segmentation,Create assess_segmentation,iterseg._dock_widgets:assess_segmentation,iterseg.compare_segmentations,Create compare_segmentations,iterseg._dock_widgets:compare_segmentations,iterseg.train_from_viewer,train_from_viewer,False,iterseg.load_data,load_data,False,iterseg.assess_segmentation,assess_segmentation,False,iterseg.compare_segmentations,compare_segmentations,False,iterseg.segment_data,Create segment_data,iterseg._dock_widgets:segment_data,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,iterseg.save_frames,Create save_frames,iterseg._dock_widgets:save_frames,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,iterseg.ground_truth_from_ROI,Create ground_truth_from_ROI,iterseg._dock_widgets:ground_truth_from_ROI,iterseg.load_ome_zarr,Load an OME-Zarr image or labels image,iterseg._io:get_napari_reader,,,,,,,,,,,,,,iterseg.segment_data,segment_data,False,iterseg.save_frames,save_frames,False,iterseg.ground_truth_from_ROI,ground_truth_from_ROI,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -48,koopa-viz,0.0.5,Koopa,Vizualization plugin for koopa image analysis,Bastian Eichenberger,MIT,https://github.com/bbquercus/koopa,63578dfc9d86323dec085ee2,['conda'],,https://github.com/bbquercus/koopa-viz,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/koopa-viz,http://api.anaconda.org/packages/conda-forge/koopa-viz,http://anaconda.org/conda-forge/koopa-viz,"['0.0.1', '0.0.4', '0.0.5']",0.0.5,0.0.5,['noarch'],5.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/koopa-viz/0.0.1,1.0,0.0,2022-10-25 07:19:22.037000+00:00,2023-06-18 08:42:51.044000+00:00,conda,noarch/koopa-viz-0.0.1-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['napari', 'numpy', 'pandas', 'pyarrow', 'python >=3.8', 'qtpy', 'scikit-image', 'tifffile', 'trackpy']",noarch,1666682211646.0,None-any-None,pyhd8ed1ab_0,2022-10-25 07:19:22.445000+00:00,a5edcbc40cbd8b11ac5ea0cec24ee7c6,None,12017.0,conda-forge/koopa-viz/0.0.1/noarch/koopa-viz-0.0.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/koopa-viz/0.0.1/noarch/koopa-viz-0.0.1-pyhd8ed1ab_0.tar.bz2,conda,0.0.1,conda-forge,['main'],public,,0.2.1,koopa-viz.make_qwidget,Visualize koopa analysis directories,koopa_viz._widget:KoopaWidget,,,,2.1,koopa-viz,0.0.5,,Vizualization plugin for koopa image analysis,"[![License MIT](https://img.shields.io/pypi/l/koopa-viz.svg?color=green)](https://github.com/bbquercus/koopa/raw/main/LICENSE) +",text/markdown,https://github.com/abigailmcgovern/iterseg,Abigail S McGovern & Juan Nunez-Iglesias,Abigail.McGovern1@monash.edu,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['numpy', 'dask', 'torch', 'scikit-image', 'pandas', 'ome-zarr', 'zarr', 'matplotlib', 'napari', 'umetrix', 'numba', 'scipy', 'seaborn']",>=3.7,"['Bug Tracker, https://github.com/abigailmcgovern/iterseg/issues', 'Documentation, https://github.com/abigailmcgovern/iterseg#README.md', 'Source Code, https://github.com/abigailmcgovern/iterseg', 'User Support, https://github.com/abigailmcgovern/iterseg/issues']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,iterseg.load_data,Create load_data,iterseg._dock_widgets:load_data,iterseg.assess_segmentation,Create assess_segmentation,iterseg._dock_widgets:assess_segmentation,iterseg.compare_segmentations,Create compare_segmentations,iterseg._dock_widgets:compare_segmentations,iterseg.train_from_viewer,train_from_viewer,False,iterseg.load_data,load_data,False,iterseg.assess_segmentation,assess_segmentation,False,iterseg.compare_segmentations,compare_segmentations,False,iterseg.segment_data,Create segment_data,iterseg._dock_widgets:segment_data,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,iterseg.save_frames,Create save_frames,iterseg._dock_widgets:save_frames,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,iterseg.ground_truth_from_ROI,Create ground_truth_from_ROI,iterseg._dock_widgets:ground_truth_from_ROI,iterseg.load_ome_zarr,Load an OME-Zarr image or labels image,iterseg._io:get_napari_reader,,,,,,,,,,,iterseg.segment_data,segment_data,False,iterseg.save_frames,save_frames,False,iterseg.ground_truth_from_ROI,ground_truth_from_ROI,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +54,koopa-viz,0.0.5,Koopa,Vizualization plugin for koopa image analysis,Bastian Eichenberger,MIT,https://github.com/bbquercus/koopa,63578dfc9d86323dec085ee2,['conda'],,https://github.com/bbquercus/koopa-viz,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/koopa-viz,http://api.anaconda.org/packages/conda-forge/koopa-viz,http://anaconda.org/conda-forge/koopa-viz,"['0.0.1', '0.0.4', '0.0.5']",0.0.5,0.0.5,['noarch'],5.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/koopa-viz/0.0.1,1.0,0.0,2022-10-25 07:19:22.037000+00:00,2023-06-18 08:42:51.044000+00:00,conda,noarch/koopa-viz-0.0.1-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['napari', 'numpy', 'pandas', 'pyarrow', 'python >=3.8', 'qtpy', 'scikit-image', 'tifffile', 'trackpy']",noarch,1666682211646.0,None-any-None,pyhd8ed1ab_0,2022-10-25 07:19:22.445000+00:00,a5edcbc40cbd8b11ac5ea0cec24ee7c6,None,12017.0,conda-forge/koopa-viz/0.0.1/noarch/koopa-viz-0.0.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/koopa-viz/0.0.1/noarch/koopa-viz-0.0.1-pyhd8ed1ab_0.tar.bz2,conda,0.0.1,conda-forge,['main'],public,,0.2.1,koopa-viz.make_qwidget,Visualize koopa analysis directories,koopa_viz._widget:KoopaWidget,,,,2.1,koopa-viz,0.0.5,,Vizualization plugin for koopa image analysis,"[![License MIT](https://img.shields.io/pypi/l/koopa-viz.svg?color=green)](https://github.com/bbquercus/koopa/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/koopa-viz.svg?color=green)](https://pypi.org/project/koopa-viz) [![Python Version](https://img.shields.io/pypi/pyversions/koopa-viz.svg?color=green)](https://python.org) [![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/koopa-viz)](https://napari-hub.org/plugins/koopa-viz) @@ -4967,8 +5623,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [Cookiecutter]: https://github.com/audreyr/cookiecutter [@napari]: https://github.com/napari [file an issue]: https://github.com/bbquercus/koopa/issues -",text/markdown,https://github.com/bbquercus/koopa,Bastian Eichenberger,bastian@eichenbergers.ch,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'pandas', 'pyarrow', 'qtpy', 'tifffile', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.8,"['Bug Tracker, https://github.com/bbquercus/koopa/issues', 'Documentation, https://github.com/bbquercus/koopa#README.md', 'Source Code, https://github.com/bbquercus/koopa', 'User Support, https://github.com/bbquercus/koopa/issues']",['testing'],False,0.0.4,conda-forge/koopa-viz/0.0.4,0.0.5,conda-forge/koopa-viz/0.0.5,,,conda,noarch/koopa-viz-0.0.4-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['napari', 'numpy', 'pandas', 'pyarrow', 'python >=3.8', 'qtpy', 'scikit-image', 'tifffile', 'trackpy']",pyhd8ed1ab_0,1682247747584.0,None-any-None,noarch,2023-04-23 11:04:29.621000+00:00,ba1af0be66b2b0b83c92b4edaa9b24e5,dad019ccc886fadf623b0dad81f21f70d921e0982400ec98acbd30789e98831d,13507.0,conda-forge/koopa-viz/0.0.4/noarch/koopa-viz-0.0.4-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/koopa-viz/0.0.4/noarch/koopa-viz-0.0.4-pyhd8ed1ab_0.conda,conda,0.0.4,conda-forge,['main'],conda,noarch/koopa-viz-0.0.5-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['napari', 'numpy', 'pandas', 'pyarrow', 'python >=3.8', 'qtpy', 'scikit-image', 'tifffile', 'trackpy']",noarch,1683022813595.0,None-any-None,pyhd8ed1ab_0,2023-05-02 10:22:57.753000+00:00,2c13d32906a96e3b638a0bc90c4bea40,8fa81a878a65dc02deb9abdd21577ffa8b16736242dbb69dbee517071629d0f5,13186.0,conda-forge/koopa-viz/0.0.5/noarch/koopa-viz-0.0.5-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/koopa-viz/0.0.5/noarch/koopa-viz-0.0.5-pyhd8ed1ab_0.conda,conda,0.0.5,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,koopa-viz.make_qwidget,Koopa,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -49,Label-Creator,0.0.9,Label-Creator,A napari plugin for generation of Label-Layers according to selected image data shapes,"Marc Boucsein, Robin Koch",BSD-3,https://github.com/MBPhys/Label-Creator,62062cda414b5ba20e23634c,['conda'],,https://github.com/MBPhys/Label-Creator,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/label-creator,http://api.anaconda.org/packages/conda-forge/label-creator,http://anaconda.org/conda-forge/label-creator,['0.0.9'],0.0.9,0.0.9,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.9,conda-forge/label-creator/0.0.9,1.0,0.0,2022-02-11 09:31:03.416000+00:00,2023-06-18 08:40:49.711000+00:00,conda,noarch/label-creator-0.0.9-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7']",noarch,1644571698076.0,None-any-None,pyhd8ed1ab_0,2022-02-11 09:31:04.185000+00:00,6ed32cb1d0814b27429a4f515e64f148,None,8789.0,conda-forge/label-creator/0.0.9/noarch/label-creator-0.0.9-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/label-creator/0.0.9/noarch/label-creator-0.0.9-pyhd8ed1ab_0.tar.bz2,conda,0.0.9,conda-forge,['main'],public,,0.2.1,Label-Creator.Creator,Creator,Label_Creator.create_Label:Creator,,,,2.1,Label-Creator,0.0.9,['UNKNOWN'],A napari plugin for generation of Label-Layers according to selected image data shapes,"# Label-Creator +",text/markdown,https://github.com/bbquercus/koopa,Bastian Eichenberger,bastian@eichenbergers.ch,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'pandas', 'pyarrow', 'qtpy', 'tifffile', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.8,"['Bug Tracker, https://github.com/bbquercus/koopa/issues', 'Documentation, https://github.com/bbquercus/koopa#README.md', 'Source Code, https://github.com/bbquercus/koopa', 'User Support, https://github.com/bbquercus/koopa/issues']",['testing'],False,0.0.4,conda-forge/koopa-viz/0.0.4,0.0.5,conda-forge/koopa-viz/0.0.5,,,conda,noarch/koopa-viz-0.0.4-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['napari', 'numpy', 'pandas', 'pyarrow', 'python >=3.8', 'qtpy', 'scikit-image', 'tifffile', 'trackpy']",pyhd8ed1ab_0,1682247747584.0,None-any-None,noarch,2023-04-23 11:04:29.621000+00:00,ba1af0be66b2b0b83c92b4edaa9b24e5,dad019ccc886fadf623b0dad81f21f70d921e0982400ec98acbd30789e98831d,13507.0,conda-forge/koopa-viz/0.0.4/noarch/koopa-viz-0.0.4-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/koopa-viz/0.0.4/noarch/koopa-viz-0.0.4-pyhd8ed1ab_0.conda,conda,0.0.4,conda-forge,['main'],conda,noarch/koopa-viz-0.0.5-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['napari', 'numpy', 'pandas', 'pyarrow', 'python >=3.8', 'qtpy', 'scikit-image', 'tifffile', 'trackpy']",noarch,1683022813595.0,None-any-None,pyhd8ed1ab_0,2023-05-02 10:22:57.753000+00:00,2c13d32906a96e3b638a0bc90c4bea40,8fa81a878a65dc02deb9abdd21577ffa8b16736242dbb69dbee517071629d0f5,13186.0,conda-forge/koopa-viz/0.0.5/noarch/koopa-viz-0.0.5-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/koopa-viz/0.0.5/noarch/koopa-viz-0.0.5-pyhd8ed1ab_0.conda,conda,0.0.5,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,koopa-viz.make_qwidget,Koopa,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +55,Label-Creator,0.0.9,Label-Creator,A napari plugin for generation of Label-Layers according to selected image data shapes,"Marc Boucsein, Robin Koch",BSD-3,https://github.com/MBPhys/Label-Creator,62062cda414b5ba20e23634c,['conda'],,https://github.com/MBPhys/Label-Creator,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/label-creator,http://api.anaconda.org/packages/conda-forge/label-creator,http://anaconda.org/conda-forge/label-creator,['0.0.9'],0.0.9,0.0.9,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.9,conda-forge/label-creator/0.0.9,1.0,0.0,2022-02-11 09:31:03.416000+00:00,2023-06-18 08:40:49.711000+00:00,conda,noarch/label-creator-0.0.9-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7']",noarch,1644571698076.0,None-any-None,pyhd8ed1ab_0,2022-02-11 09:31:04.185000+00:00,6ed32cb1d0814b27429a4f515e64f148,None,8789.0,conda-forge/label-creator/0.0.9/noarch/label-creator-0.0.9-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/label-creator/0.0.9/noarch/label-creator-0.0.9-pyhd8ed1ab_0.tar.bz2,conda,0.0.9,conda-forge,['main'],public,,0.2.1,Label-Creator.Creator,Creator,Label_Creator.create_Label:Creator,,,,2.1,Label-Creator,0.0.9,['UNKNOWN'],A napari plugin for generation of Label-Layers according to selected image data shapes,"# Label-Creator [![License](https://img.shields.io/pypi/l/napari-medical-image-formats.svg?color=green)](https://github.com/MBPhys/Label-Creator/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/Label-Creator.svg?color=green)](https://pypi.org/project/Label-Creator) @@ -5016,8 +5672,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/MBPhys/Label-Creator,"Marc Boucsein, Robin Koch",,BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'dask']",>=3.7,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Label-Creator.Creator,Creator,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -50,Large-Image-Viewer,1.1.0,Large Image Viewer,A simple plugin to view large images,Nima Mojtahedi,MIT,https://github.com/WyssCenter/Large-Image-Viewer,65593b99b78053e626d4ebe7,['conda'],,https://pypi.org/project/Large-Image-Viewer,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/large-image-viewer,http://api.anaconda.org/packages/conda-forge/large-image-viewer,http://anaconda.org/conda-forge/large-image-viewer,['1.1.0'],1.1.0,1.1.0,['noarch'],3.0,,['pyhd8ed1ab_0'],1.1.0,conda-forge/large-image-viewer/1.1.0,1.0,0.0,2023-11-18 22:32:53.611000+00:00,2023-11-18 22:32:57.851000+00:00,conda,noarch/large-image-viewer-1.1.0-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['dask-core', 'dask-image', 'numpy', 'python >=3.8', 'scikit-image']",noarch,1700346644501.0,None-any-None,pyhd8ed1ab_0,2023-11-18 22:32:55.689000+00:00,7fbc0927dd5a87dcd1089e8550ac3495,b3a8a79fb5c6aba7cee9ac3d7ab16b92ed8b6d0bb856d0646c21aae6cb7f82ff,13312.0,conda-forge/large-image-viewer/1.1.0/noarch/large-image-viewer-1.1.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/large-image-viewer/1.1.0/noarch/large-image-viewer-1.1.0-pyhd8ed1ab_0.conda,conda,1.1.0,conda-forge,['main'],public,,0.2.1,Large-Image-Viewer.get_reader,Open data with Large Image Viewer,large_image_viewer._reader:napari_get_reader,Large-Image-Viewer.get_reader,"['*.tiff', '*.tif']",False,2.1,Large-Image-Viewer,1.1.0,,A simple plugin to view large images,"# Large-Image-Viewer +",text/markdown,https://github.com/MBPhys/Label-Creator,"Marc Boucsein, Robin Koch",,BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'dask']",>=3.7,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Label-Creator.Creator,Creator,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +56,Large-Image-Viewer,1.1.0,Large Image Viewer,A simple plugin to view large images,Nima Mojtahedi,MIT,https://github.com/WyssCenter/Large-Image-Viewer,65593b99b78053e626d4ebe7,['conda'],,https://pypi.org/project/Large-Image-Viewer,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/large-image-viewer,http://api.anaconda.org/packages/conda-forge/large-image-viewer,http://anaconda.org/conda-forge/large-image-viewer,['1.1.0'],1.1.0,1.1.0,['noarch'],3.0,,['pyhd8ed1ab_0'],1.1.0,conda-forge/large-image-viewer/1.1.0,1.0,0.0,2023-11-18 22:32:53.611000+00:00,2023-11-18 22:32:57.851000+00:00,conda,noarch/large-image-viewer-1.1.0-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['dask-core', 'dask-image', 'numpy', 'python >=3.8', 'scikit-image']",noarch,1700346644501.0,None-any-None,pyhd8ed1ab_0,2023-11-18 22:32:55.689000+00:00,7fbc0927dd5a87dcd1089e8550ac3495,b3a8a79fb5c6aba7cee9ac3d7ab16b92ed8b6d0bb856d0646c21aae6cb7f82ff,13312.0,conda-forge/large-image-viewer/1.1.0/noarch/large-image-viewer-1.1.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/large-image-viewer/1.1.0/noarch/large-image-viewer-1.1.0-pyhd8ed1ab_0.conda,conda,1.1.0,conda-forge,['main'],public,,0.2.1,Large-Image-Viewer.get_reader,Open data with Large Image Viewer,large_image_viewer._reader:napari_get_reader,Large-Image-Viewer.get_reader,"['*.tiff', '*.tif']",False,2.1,Large-Image-Viewer,1.1.0,,A simple plugin to view large images,"# Large-Image-Viewer [![License MIT](https://img.shields.io/pypi/l/Large-Image-Viewer.svg?color=green)](https://github.com/WyssCenter/Large-Image-Viewer/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/Large-Image-Viewer.svg?color=green)](https://pypi.org/project/Large-Image-Viewer) @@ -5146,8 +5802,8 @@ This plugin is licensed under the [MIT License](LICENSE). ## Contact For any inquiries or questions, you can reach out to the author at nima.mojtahedi@wysscenter.ch -",text/markdown,https://github.com/WyssCenter/Large-Image-Viewer,Nima Mojtahedi,nima.mojtahedi@wysscenter.ch,MIT,"['Development Status :: 3 - Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'dask[array]', 'dask-image', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/WyssCenter/Large-Image-Viewer/issues', 'Documentation, https://github.com/WyssCenter/Large-Image-Viewer#README.md', 'Source Code, https://github.com/WyssCenter/Large-Image-Viewer', 'User Support, https://github.com/WyssCenter/Large-Image-Viewer/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -51,Layer-Data-Replace,0.0.5,Layer-Data-Replace,A napari plugin in order to replace parts of the data of a layer by another one,"Marc Boucsein, Robin Koch",BSD-3,https://github.com/MBPhys/Layer-Data-Replace,62062cbaa3c32938bd4b5829,['conda'],,https://github.com/MBPhys/Layer-Data-Replace,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/layer-data-replace,http://api.anaconda.org/packages/conda-forge/layer-data-replace,http://anaconda.org/conda-forge/layer-data-replace,['0.0.5'],0.0.5,0.0.5,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.5,conda-forge/layer-data-replace/0.0.5,1.0,0.0,2022-02-11 09:30:32.921000+00:00,2023-06-18 08:40:49.698000+00:00,conda,noarch/layer-data-replace-0.0.5-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7']",noarch,1644571687559.0,None-any-None,pyhd8ed1ab_0,2022-02-11 09:30:33.199000+00:00,11b3a2988d037110d1722d1c2576f2fb,None,9795.0,conda-forge/layer-data-replace/0.0.5/noarch/layer-data-replace-0.0.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/layer-data-replace/0.0.5/noarch/layer-data-replace-0.0.5-pyhd8ed1ab_0.tar.bz2,conda,0.0.5,conda-forge,['main'],public,,0.2.1,Layer-Data-Replace.Replace,Replace,Layer_Data_Replace.Data_Replace_script:Replace,,,,2.1,Layer-Data-Replace,0.0.5,['UNKNOWN'],A napari plugin in order to replace parts of the data of a layer by another one,"# Layer-Data-Replace +",text/markdown,https://github.com/WyssCenter/Large-Image-Viewer,Nima Mojtahedi,nima.mojtahedi@wysscenter.ch,MIT,"['Development Status :: 3 - Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'dask[array]', 'dask-image', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/WyssCenter/Large-Image-Viewer/issues', 'Documentation, https://github.com/WyssCenter/Large-Image-Viewer#README.md', 'Source Code, https://github.com/WyssCenter/Large-Image-Viewer', 'User Support, https://github.com/WyssCenter/Large-Image-Viewer/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +57,Layer-Data-Replace,0.0.5,Layer-Data-Replace,A napari plugin in order to replace parts of the data of a layer by another one,"Marc Boucsein, Robin Koch",BSD-3,https://github.com/MBPhys/Layer-Data-Replace,62062cbaa3c32938bd4b5829,['conda'],,https://github.com/MBPhys/Layer-Data-Replace,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/layer-data-replace,http://api.anaconda.org/packages/conda-forge/layer-data-replace,http://anaconda.org/conda-forge/layer-data-replace,['0.0.5'],0.0.5,0.0.5,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.5,conda-forge/layer-data-replace/0.0.5,1.0,0.0,2022-02-11 09:30:32.921000+00:00,2023-06-18 08:40:49.698000+00:00,conda,noarch/layer-data-replace-0.0.5-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7']",noarch,1644571687559.0,None-any-None,pyhd8ed1ab_0,2022-02-11 09:30:33.199000+00:00,11b3a2988d037110d1722d1c2576f2fb,None,9795.0,conda-forge/layer-data-replace/0.0.5/noarch/layer-data-replace-0.0.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/layer-data-replace/0.0.5/noarch/layer-data-replace-0.0.5-pyhd8ed1ab_0.tar.bz2,conda,0.0.5,conda-forge,['main'],public,,0.2.1,Layer-Data-Replace.Replace,Replace,Layer_Data_Replace.Data_Replace_script:Replace,,,,2.1,Layer-Data-Replace,0.0.5,['UNKNOWN'],A napari plugin in order to replace parts of the data of a layer by another one,"# Layer-Data-Replace [![License](https://img.shields.io/pypi/l/napari-medical-image-formats.svg?color=green)](https://github.com/MBPhys/Layer-Data-Replace/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/Layer-Data-Replace.svg?color=green)](https://pypi.org/project/Layer-Data-Replace) @@ -5195,8 +5851,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/MBPhys/Layer-Data-Replace,"Marc Boucsein, Robin Koch",,BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'dask']",>=3.7,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Layer-Data-Replace.Replace,Replace,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -52,manini,0.0.11,Manini,"An user-friendly plugin that enables to annotate images from a pre-trained model (segmentation, classification, detection) given by an user.",Herearii Metuarea,BSD-3-Clause,https://github.com/hereariim/manini,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,manini.manini_widget,Manini Widget,manini._widget:ManiniWidget,,,,2.1,manini,0.0.11,,"An user-friendly plugin that enables to annotate images from a pre-trained model (segmentation, classification, detection) given by an user.","# manini +",text/markdown,https://github.com/MBPhys/Layer-Data-Replace,"Marc Boucsein, Robin Koch",,BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'dask']",>=3.7,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Layer-Data-Replace.Replace,Replace,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +58,manini,0.0.11,Manini,"An user-friendly plugin that enables to annotate images from a pre-trained model (segmentation, classification, detection) given by an user.",Herearii Metuarea,BSD-3-Clause,https://github.com/hereariim/manini,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,manini.manini_widget,Manini Widget,manini._widget:ManiniWidget,,,,2.1,manini,0.0.11,,"An user-friendly plugin that enables to annotate images from a pre-trained model (segmentation, classification, detection) given by an user.","# manini [![License BSD-3](https://img.shields.io/pypi/l/manini.svg?color=green)](https://github.com/hereariim/manini/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/manini.svg?color=green)](https://pypi.org/project/manini) @@ -5340,8 +5996,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/hereariim/manini,Herearii Metuarea,herearii.metuarea@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'napari', 'scikit-image', 'pandas', 'opencv-python-headless', 'tensorflow', 'PyQt5', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""', 'pytest-xvfb; extra == ""testing""', 'numpy; extra == ""testing""', 'magicgui; extra == ""testing""', 'qtpy; extra == ""testing""', 'scikit-image; extra == ""testing""', 'pandas; extra == ""testing""', 'opencv-python-headless; extra == ""testing""', 'tensorflow; extra == ""testing""']",>=3.8,"['Bug Tracker, https://github.com/hereariim/manini/issues', 'Documentation, https://github.com/hereariim/manini#README.md', 'Source Code, https://github.com/hereariim/manini', 'User Support, https://github.com/hereariim/manini/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,manini.manini_save,Save segmentation or detection,manini._widget:save_as_zip,,,,,,,manini.manini_widget,Manini,False,manini.manini_save,Export,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -53,microscope-napari,0.0.4,microscope-napari,Nanobiosensorics microscopic napari plugin.,Nanobiosensorics,BSD-3,https://github.com/Nanobiosensorics/microscope-napari,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.1.0,microscope-napari.widgets.segmentation,Create cellpose,microscope_napari.widgets.segmentation_widget:widget_wrapper,,,,2.1,microscope-napari,0.0.4,,Nanobiosensorics microscopic napari plugin.,"# Installation +",text/markdown,https://github.com/hereariim/manini,Herearii Metuarea,herearii.metuarea@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'napari', 'scikit-image', 'pandas', 'opencv-python-headless', 'tensorflow', 'PyQt5', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""', 'pytest-xvfb; extra == ""testing""', 'numpy; extra == ""testing""', 'magicgui; extra == ""testing""', 'qtpy; extra == ""testing""', 'scikit-image; extra == ""testing""', 'pandas; extra == ""testing""', 'opencv-python-headless; extra == ""testing""', 'tensorflow; extra == ""testing""']",>=3.8,"['Bug Tracker, https://github.com/hereariim/manini/issues', 'Documentation, https://github.com/hereariim/manini#README.md', 'Source Code, https://github.com/hereariim/manini', 'User Support, https://github.com/hereariim/manini/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,manini.manini_save,Save segmentation or detection,manini._widget:save_as_zip,,,,,,,manini.manini_widget,Manini,False,manini.manini_save,Export,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +59,microscope-napari,0.0.5,microscope-napari,Nanobiosensorics microscopic napari plugin.,Nanobiosensorics,BSD-3,https://github.com/Nanobiosensorics/microscope-napari,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.1.0,microscope-napari.widgets.segmentation,Create cellpose,microscope_napari.widgets.segmentation_widget:widget_wrapper,,,,2.1,microscope-napari,0.0.5,,Nanobiosensorics microscopic napari plugin.,"# Installation Napari needs to be set up on your machine in order to install this plugin. @@ -5374,7 +6030,7 @@ Images can be segmented with custom and built-in cellpose models. ![kép](https://github.com/Nanobiosensorics/microscope-napari/assets/65455148/82d300b9-c523-4b0a-bf44-0f3bfdadae07) -For further information make sure to check out ![cellpose](https://github.com/MouseLand/cellpose) and ![cellpose-napari](https://github.com/MouseLand/cellpose-napari) plugin. +For further information make sure to check out [cellpose](https://github.com/MouseLand/cellpose) and [cellpose-napari](https://github.com/MouseLand/cellpose-napari) plugin. ## Cell counting @@ -5386,24 +6042,25 @@ Any number of napari image layers can be selected to be evaluated. Without enabling regression model counting the default used method is cellpose segmenting. The lower settings are for cellpose only. -Cell outlines can be output to verify the accuracy of results. +Cell masks can be output to verify the accuracy of results. Our custom cellpose models can be accessed [there](https://drive.google.com/drive/folders/1-2SRK_AIlcSODebPoigKA7kbn5cb5s2o?usp=sharing). -![kép](https://github.com/Nanobiosensorics/microscope-napari/assets/65455148/4b380ad4-bb7a-46a3-a821-fd7386bdd959) +![kép](https://github.com/user-attachments/assets/00d1336f-eeb4-4074-87a6-70d9cd866c07) ### Average intensity regression model For these models we should enable the regression model counting feature. -The lower settings are irrelevant now, cell outlines will not be output. +The lower settings are irrelevant now, cell masks will not be output. It is only used for counting cells in images. Our regression models can be accessed [there](https://drive.google.com/drive/folders/1-5uAXN1W5lbE2Pw6Tsa1lR5BYqmPgdEP?usp=sharing). -![kép](https://github.com/Nanobiosensorics/microscope-napari/assets/65455148/3b256da5-7eca-4d4a-a075-175502fbfb1e) +![kép](https://github.com/user-attachments/assets/7d733347-ceed-4780-9bea-154c8faf3d4d) + -",text/markdown,https://github.com/Nanobiosensorics/microscope-napari,Nanobiosensorics,horvath.robert@energia.mta.hu,BSD-3,"['Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License', 'Framework :: napari']","['napari', 'napari-plugin-engine >=0.1.4', 'cellpose >0.6.3', 'imagecodecs', ""sphinx >=3.0 ; extra == 'docs'"", ""sphinxcontrib-apidoc ; extra == 'docs'"", ""sphinx-rtd-theme ; extra == 'docs'"", ""sphinx-prompt ; extra == 'docs'"", ""sphinx-autodoc-typehints ; extra == 'docs'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.7,,"['docs', 'testing']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,microscope-napari.widgets.counting,Count cells,microscope_napari.widgets.counting_widget:widget_wrapper,microscope-napari.samples.rgb_3D,Generate RGB 3D sample,microscope_napari.samples.cell_data:rgb_3D.tif,microscope-napari.samples.rgb_2D,Generate RGB 2D sample,microscope_napari.samples.cell_data:rgb_2D.png,microscope-napari.widgets.segmentation,cellpose,False,microscope-napari.widgets.counting,cell counting,False,,,,,,,,,,,,,,,,,microscope-napari.samples.rgb_3D,rgb_3D,Cells (3D+2Ch),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,microscope-napari.samples.rgb_2D,rgb_2D,Cells 2D,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -54,midi-app-controller,0.0.12,midi-app-controller,Control napari with a MIDI controller.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,midi-app-controller.midi_status,Show MIDI controller status and settings,midi_app_controller.gui.midi_status:MidiStatus,,,,2.1,midi-app-controller,0.0.12,,Control napari with a MIDI controller.,"# midi-app-controller +",text/markdown,https://github.com/Nanobiosensorics/microscope-napari,Nanobiosensorics,horvath.robert@energia.mta.hu,BSD-3,"['Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License', 'Framework :: napari']","['napari', 'napari-plugin-engine>=0.1.4', 'cellpose>0.6.3', 'imagecodecs', 'sphinx>=3.0; extra == ""docs""', 'sphinxcontrib-apidoc; extra == ""docs""', 'sphinx-rtd-theme; extra == ""docs""', 'sphinx-prompt; extra == ""docs""', 'sphinx-autodoc-typehints; extra == ""docs""', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.7,,"['docs', 'testing']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,microscope-napari.widgets.counting,Count cells,microscope_napari.widgets.counting_widget:widget_wrapper,microscope-napari.samples.rgb_3D,Generate RGB 3D sample,microscope_napari.samples.cell_data:rgb_3D.tif,microscope-napari.samples.rgb_2D,Generate RGB 2D sample,microscope_napari.samples.cell_data:rgb_2D.png,microscope-napari.widgets.segmentation,cellpose,False,microscope-napari.widgets.counting,cell counting,False,,,,,,,,,,,,,,,,,microscope-napari.samples.rgb_3D,rgb_3D,Cells (3D+2Ch),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,microscope-napari.samples.rgb_2D,rgb_2D,Cells 2D,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +60,midi-app-controller,0.1.1,midi-app-controller,Control napari with a MIDI controller.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,midi-app-controller.midi_status,Show MIDI controller status and settings,midi_app_controller.gui.midi_status:MidiStatus,,,,2.1,midi-app-controller,0.1.1,,Control napari with a MIDI controller.,"# midi-app-controller [![codecov](https://codecov.io/gh/midi-app-controller/midi-app-controller/graph/badge.svg?token=YALMD0PQ80)](https://codecov.io/gh/midi-app-controller/midi-app-controller) [![Documentation Status](https://readthedocs.org/projects/midi-app-controller/badge/?version=latest)](https://midi-app-controller.readthedocs.io/en/latest/?badge=latest) @@ -5498,8 +6155,8 @@ mkdocs serve -a localhost:8080 python3 -m pip install -e .[dev] pre-commit install ``` -",text/markdown,,,,,"['Framework :: napari', 'License :: OSI Approved :: BSD License', 'Programming Language :: Python']","['napari[all] >=0.4.19', 'python-rtmidi >=1.5.8', 'pyyaml >=6.0.1', 'pydantic >=2.7.1', 'appdirs >=1.4.4', 'qtpy >=2.4.1', 'superqt >=0.6.5', ""midi-app-controller[testing] ; extra == 'dev'"", ""pre-commit >=3.7.0 ; extra == 'dev'"", ""pytest >=8.2.0 ; extra == 'testing'"", ""pytest-cov >=5.0.0 ; extra == 'testing'"", ""pytest-qt >=4.0.2 ; extra == 'testing'""]",>=3.9,"['Source Code, https://github.com/midi-app-controller/midi-app-controller', 'Documentation, https://midi-app-controller.readthedocs.io']","['dev', 'testing']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,midi-app-controller.midi_status,MIDI controller status and settings,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -55,mikro-napari,0.1.63,Mikro Napari,A napari plugin to interact with and provide functionality for a connected arkitekt server,jhnnsrs,CC BY-NC 3.0,https://github.com/jhnnsrs/mikro-napari,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.0,mikro-napari.arkitekt_widget,Open Arkitekt,mikro_napari.plugin:ArkitektPluginWidget,,,,2.1,mikro-napari,0.1.63,,A napari plugin to interact with and provide functionality for a connected arkitekt server,"# mikro-napari +",text/markdown,,,,,"['Framework :: napari', 'License :: OSI Approved :: BSD License', 'Programming Language :: Python']","['napari>=0.4.19', 'python-rtmidi>=1.5.8', 'pyyaml>=6.0.1', 'pydantic>=2.7.1', 'appdirs>=1.4.4', 'qtpy>=2.4.1', 'superqt>=0.6.5', 'midi-app-controller[testing]; extra == ""dev""', 'pre-commit>=3.7.0; extra == ""dev""', 'pytest>=8.2.0; extra == ""testing""', 'pytest-cov>=5.0.0; extra == ""testing""', 'pytest-qt>=4.0.2; extra == ""testing""', 'napari[all]; extra == ""testing""', 'flexparser!=0.4.0; extra == ""testing""']",>=3.9,"['Source Code, https://github.com/midi-app-controller/midi-app-controller', 'Documentation, https://midi-app-controller.readthedocs.io']","['dev', 'testing']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,midi-app-controller.midi_status,MIDI controller status and settings,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +61,mikro-napari,0.1.63,Mikro Napari,A napari plugin to interact with and provide functionality for a connected arkitekt server,jhnnsrs,CC BY-NC 3.0,https://github.com/jhnnsrs/mikro-napari,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.0,mikro-napari.arkitekt_widget,Open Arkitekt,mikro_napari.plugin:ArkitektPluginWidget,,,,2.1,mikro-napari,0.1.63,,A napari plugin to interact with and provide functionality for a connected arkitekt server,"# mikro-napari [![codecov](https://codecov.io/gh/jhnnsrs/mikro-napari/branch/master/graph/badge.svg?token=UGXEA2THBV)](https://codecov.io/gh/jhnnsrs/mikro-napari) [![PyPI version](https://badge.fury.io/py/mikro-napari.svg)](https://pypi.org/project/mikro-napari/) @@ -5530,8 +6187,8 @@ pip install mikro-napari napari[pyqt5] ``` -",text/markdown,https://github.com/jhnnsrs/mikro-napari,jhnnsrs,jhnnsrs@gmail.com,CC BY-NC 3.0,"['Framework :: napari', 'License :: Other/Proprietary License', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11']","['arkitekt[fluss,mikro,reaktion,rekuest,unlok] (>=0.5.58)']",">=3.8,<=3.12","['Repository, https://github.com/jhnnsrs/mikro-napari']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,mikro-napari.sidebar_widget,Open Sidebar,mikro_napari.plugin:ArkitektPluginSidebar,,,,,,,mikro-napari.arkitekt_widget,Arkitekt Widget,False,mikro-napari.sidebar_widget,Arkitekt Sidebar,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -56,misic-napari,0.2.3,misic-napari,Segmentation of bacteria agnostic to imaging modality,"S. Panigrahi & L. Espinosa, IAM, LCB",MIT,https://github.com/pswap/misic,620686d16153904138c4c452,['conda'],,https://github.com/pswapnesh/MiSiC,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/misic-napari,http://api.anaconda.org/packages/conda-forge/misic-napari,http://anaconda.org/conda-forge/misic-napari,"['0.2.1', '0.2.2', '0.2.3']",0.2.3,0.2.3,['noarch'],5.0,,['pyhd8ed1ab_0'],0.2.1,conda-forge/misic-napari/0.2.1,1.0,0.0,2022-02-11 15:54:51.553000+00:00,2023-06-18 08:40:50.138000+00:00,conda,noarch/misic-napari-0.2.1-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['napari', 'napari-plugin-engine', 'python >=3.6', 'scikit-image', 'tensorflow >=2']",noarch,1644594685748.0,None-any-None,pyhd8ed1ab_0,2022-02-11 15:54:52.250000+00:00,2d2457d1f0457907508aad308a784f25,None,6965365.0,conda-forge/misic-napari/0.2.1/noarch/misic-napari-0.2.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/misic-napari/0.2.1/noarch/misic-napari-0.2.1-pyhd8ed1ab_0.tar.bz2,conda,0.2.1,conda-forge,['main'],public,,0.2.1,misic-napari.get_width,get_width,misic_ui:get_width,,,,2.1,misic-napari,0.2.3,,Segmentation of bacteria agnostic to imaging modality,"# misic-napari +",text/markdown,https://github.com/jhnnsrs/mikro-napari,jhnnsrs,jhnnsrs@gmail.com,CC BY-NC 3.0,"['Framework :: napari', 'License :: Other/Proprietary License', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11']","['arkitekt[fluss,mikro,reaktion,rekuest,unlok] (>=0.5.58)']",">=3.8,<=3.12","['Repository, https://github.com/jhnnsrs/mikro-napari']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,mikro-napari.sidebar_widget,Open Sidebar,mikro_napari.plugin:ArkitektPluginSidebar,,,,,,,mikro-napari.arkitekt_widget,Arkitekt Widget,False,mikro-napari.sidebar_widget,Arkitekt Sidebar,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +62,misic-napari,0.2.3,misic-napari,Segmentation of bacteria agnostic to imaging modality,"S. Panigrahi & L. Espinosa, IAM, LCB",MIT,https://github.com/pswap/misic,620686d16153904138c4c452,['conda'],,https://github.com/pswapnesh/MiSiC,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/misic-napari,http://api.anaconda.org/packages/conda-forge/misic-napari,http://anaconda.org/conda-forge/misic-napari,"['0.2.1', '0.2.2', '0.2.3']",0.2.3,0.2.3,['noarch'],5.0,,['pyhd8ed1ab_0'],0.2.1,conda-forge/misic-napari/0.2.1,1.0,0.0,2022-02-11 15:54:51.553000+00:00,2023-06-18 08:40:50.138000+00:00,conda,noarch/misic-napari-0.2.1-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['napari', 'napari-plugin-engine', 'python >=3.6', 'scikit-image', 'tensorflow >=2']",noarch,1644594685748.0,None-any-None,pyhd8ed1ab_0,2022-02-11 15:54:52.250000+00:00,2d2457d1f0457907508aad308a784f25,None,6965365.0,conda-forge/misic-napari/0.2.1/noarch/misic-napari-0.2.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/misic-napari/0.2.1/noarch/misic-napari-0.2.1-pyhd8ed1ab_0.tar.bz2,conda,0.2.1,conda-forge,['main'],public,,0.2.1,misic-napari.get_width,get_width,misic_ui:get_width,,,,2.1,misic-napari,0.2.3,,Segmentation of bacteria agnostic to imaging modality,"# misic-napari +",text/markdown,,Joel Jonsson,jonsson@mpi-cbg.de,Apache-2.0,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Operating System :: OS Independent', 'License :: OSI Approved :: Apache Software License']","['numpy', 'pyapr >=1.0.0rc1', 'napari', 'napari-plugin-engine >=0.1.4', 'qtpy', 'magicgui']",>=3.8,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-apr-viewer.convert_image_to_apr,convert_image_to_apr,napari_apr_viewer._convert_image_to_apr:convert_image_to_apr,napari-apr-viewer.convert_apr_to_image,convert_apr_to_image,napari_apr_viewer._convert_apr_to_image:convert_apr_to_image,napari-apr-viewer.threshold,threshold,napari_apr_viewer._threshold:threshold,napari-apr-viewer.APRViewer,APRViewer,False,napari-apr-viewer.convert_image_to_apr,convert_image_to_apr,False,napari-apr-viewer.convert_apr_to_image,convert_apr_to_image,False,napari-apr-viewer.threshold,threshold,False,,,,napari-apr-viewer.napari_write_image,['image'],image,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +94,napari-arboretum,0.1.2,napari-arboretum,Track graph and lineage tree visualization with napari,,,,62050a16302e80ce8c940966,['conda'],,https://github.com/quantumjot/arboretum,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-arboretum,http://api.anaconda.org/packages/conda-forge/napari-arboretum,http://anaconda.org/conda-forge/napari-arboretum,"['0.0.2', '0.1.0', '0.1.1', '0.1.2']",0.1.1,0.1.2,['noarch'],6.0,https://github.com/lowe-lab-ucl/arboretum,['pyhd8ed1ab_0'],0.0.2,conda-forge/napari-arboretum/0.0.2,1.0,0.0,2022-02-10 12:50:26.950000+00:00,2023-07-28 04:17:54.068000+00:00,conda,noarch/napari-arboretum-0.0.2-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['napari >=0.4.0', 'numpy >=1.17.3', 'pyqtgraph >=0.10.0', 'python >=3.6', 'scipy >=1.3.1']",noarch,1644497290448.0,None-any-None,pyhd8ed1ab_0,2022-02-10 12:50:27.706000+00:00,e6a046a05d7e72c0f8e41b4ac5c61da5,None,13491.0,conda-forge/napari-arboretum/0.0.2/noarch/napari-arboretum-0.0.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-arboretum/0.0.2/noarch/napari-arboretum-0.0.2-pyhd8ed1ab_0.tar.bz2,conda,0.0.2,conda-forge,['main'],public,,0.1.0,napari-arboretum.Arboretum,Create Arboretum,napari_arboretum._hookimpls:Arboretum,,,,2.1,napari-arboretum,0.1.2,,Track graph and lineage tree visualization with napari," [![License](https://img.shields.io/pypi/l/napari-arboretum.svg?color=green)](https://github.com/lowe-lab-ucl/arboretum/blob/main/LICENSE.md) [![PyPI](https://img.shields.io/pypi/v/napari-arboretum.svg?color=green)](https://pypi.org/project/napari-arboretum) @@ -9079,8 +9737,8 @@ https://napari.org/stable/api/napari.layers.Tracks.html To view the legacy version of this plugin, visit the legacy branch: https://github.com/quantumjot/arboretum/tree/v1-legacy -",text/markdown,,,"""Alan R. Lowe"" ",,"['Development Status :: 4 - Beta', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python', 'Topic :: Scientific/Engineering :: Visualization']","['matplotlib', 'napari-matplotlib (>=0.2.1)', 'napari (>=0.4.0)', 'numpy (>=1.17.3)', 'pandas', 'pooch (>=1)', 'qtpy', 'scikit-image', 'vispy']",>=3.8,"['homepage, https://github.com/lowe-lab-ucl/arboretum']",,False,0.1.0,conda-forge/napari-arboretum/0.1.0,0.1.1,conda-forge/napari-arboretum/0.1.1,0.1.2,conda-forge/napari-arboretum/0.1.2,conda,noarch/napari-arboretum-0.1.0-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['matplotlib-base', 'napari >=0.4.0', 'napari-matplotlib >=0.2.1', 'numpy >=1.17.3', 'pandas', 'pooch >=1', 'python >=3.8', 'vispy']",pyhd8ed1ab_0,1655150290576.0,None-any-None,noarch,2022-06-13 20:00:46.296000+00:00,f7f054ab1000e851f4f5db65416423e4,None,18754.0,conda-forge/napari-arboretum/0.1.0/noarch/napari-arboretum-0.1.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-arboretum/0.1.0/noarch/napari-arboretum-0.1.0-pyhd8ed1ab_0.tar.bz2,conda,0.1.0,conda-forge,['main'],conda,noarch/napari-arboretum-0.1.1-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['matplotlib-base', 'napari >=0.4.0', 'napari-matplotlib >=0.2.1', 'numpy >=1.17.3', 'pandas', 'pooch >=1', 'python >=3.8', 'qtpy', 'scikit-image', 'vispy']",noarch,1663688231902.0,None-any-None,pyhd8ed1ab_0,2022-09-20 15:39:26.244000+00:00,dab10450f3932dea8393ab1ea8457a88,None,20127.0,conda-forge/napari-arboretum/0.1.1/noarch/napari-arboretum-0.1.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-arboretum/0.1.1/noarch/napari-arboretum-0.1.1-pyhd8ed1ab_0.tar.bz2,conda,0.1.1,conda-forge,['main'],conda,noarch/napari-arboretum-0.1.2-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['matplotlib-base', 'napari >=0.4.0', 'napari-matplotlib >=0.2.1', 'numpy >=1.17.3', 'pandas', 'pooch >=1', 'python >=3.8', 'qtpy', 'scikit-image', 'vispy']",MIT,python,1690517772194.0,2023-07-28 04:17:52.445000+00:00,d681878e12921fae8b152bcf3b1b083c,553af2b2e8a54a51ac03dc350f4bce03dba7d3b95ae66ebfa201f550951e32e5,21400.0,conda-forge/napari-arboretum/0.1.2/noarch/napari-arboretum-0.1.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-arboretum/0.1.2/noarch/napari-arboretum-0.1.2-pyhd8ed1ab_0.conda,conda,0.1.2,conda-forge,['main'],,,,,,,,,,,napari-arboretum.Arboretum,Arboretum,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -88,napari-argos-archive-reader,0.0.7,Dioptic ARGOS Archive Reader,A plugin to read Dioptic ARGOS archive files,Volker Hilsenstein,MIT,https://github.com/dioptic/napari-argos-archive-reader,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-argos-archive-reader.get_reader,Open data with ARGOS Archive Reader,napari_argos_archive_reader._reader:napari_get_reader,napari-argos-archive-reader.get_reader,['*.zip'],False,2.1,napari-argos-archive-reader,0.0.7,,A plugin to read Dioptic ARGOS archive files,"# napari-argos-archive-reader +",text/markdown,,,"""Alan R. Lowe"" ",,"['Development Status :: 4 - Beta', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python', 'Topic :: Scientific/Engineering :: Visualization']","['matplotlib', 'napari-matplotlib (>=0.2.1)', 'napari (>=0.4.0)', 'numpy (>=1.17.3)', 'pandas', 'pooch (>=1)', 'qtpy', 'scikit-image', 'vispy']",>=3.8,"['homepage, https://github.com/lowe-lab-ucl/arboretum']",,False,0.1.0,conda-forge/napari-arboretum/0.1.0,0.1.1,conda-forge/napari-arboretum/0.1.1,0.1.2,conda-forge/napari-arboretum/0.1.2,conda,noarch/napari-arboretum-0.1.0-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['matplotlib-base', 'napari >=0.4.0', 'napari-matplotlib >=0.2.1', 'numpy >=1.17.3', 'pandas', 'pooch >=1', 'python >=3.8', 'vispy']",pyhd8ed1ab_0,1655150290576.0,None-any-None,noarch,2022-06-13 20:00:46.296000+00:00,f7f054ab1000e851f4f5db65416423e4,None,18754.0,conda-forge/napari-arboretum/0.1.0/noarch/napari-arboretum-0.1.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-arboretum/0.1.0/noarch/napari-arboretum-0.1.0-pyhd8ed1ab_0.tar.bz2,conda,0.1.0,conda-forge,['main'],conda,noarch/napari-arboretum-0.1.1-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['matplotlib-base', 'napari >=0.4.0', 'napari-matplotlib >=0.2.1', 'numpy >=1.17.3', 'pandas', 'pooch >=1', 'python >=3.8', 'qtpy', 'scikit-image', 'vispy']",noarch,1663688231902.0,None-any-None,pyhd8ed1ab_0,2022-09-20 15:39:26.244000+00:00,dab10450f3932dea8393ab1ea8457a88,None,20127.0,conda-forge/napari-arboretum/0.1.1/noarch/napari-arboretum-0.1.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-arboretum/0.1.1/noarch/napari-arboretum-0.1.1-pyhd8ed1ab_0.tar.bz2,conda,0.1.1,conda-forge,['main'],conda,noarch/napari-arboretum-0.1.2-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['matplotlib-base', 'napari >=0.4.0', 'napari-matplotlib >=0.2.1', 'numpy >=1.17.3', 'pandas', 'pooch >=1', 'python >=3.8', 'qtpy', 'scikit-image', 'vispy']",MIT,python,1690517772194.0,2023-07-28 04:17:52.445000+00:00,d681878e12921fae8b152bcf3b1b083c,553af2b2e8a54a51ac03dc350f4bce03dba7d3b95ae66ebfa201f550951e32e5,21400.0,conda-forge/napari-arboretum/0.1.2/noarch/napari-arboretum-0.1.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-arboretum/0.1.2/noarch/napari-arboretum-0.1.2-pyhd8ed1ab_0.conda,conda,0.1.2,conda-forge,['main'],,,,,,,,,,,napari-arboretum.Arboretum,Arboretum,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +95,napari-argos-archive-reader,0.0.7,Dioptic ARGOS Archive Reader,A plugin to read Dioptic ARGOS archive files,Volker Hilsenstein,MIT,https://github.com/dioptic/napari-argos-archive-reader,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-argos-archive-reader.get_reader,Open data with ARGOS Archive Reader,napari_argos_archive_reader._reader:napari_get_reader,napari-argos-archive-reader.get_reader,['*.zip'],False,2.1,napari-argos-archive-reader,0.0.7,,A plugin to read Dioptic ARGOS archive files,"# napari-argos-archive-reader [![License MIT](https://img.shields.io/pypi/l/napari-argos-archive-reader.svg?color=green)](https://github.com/dioptic/napari-argos-archive-reader/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-argos-archive-reader.svg?color=green)](https://pypi.org/project/napari-argos-archive-reader) @@ -9168,8 +9826,8 @@ Distributed under the terms of the [MIT] license, [MIT]: http://opensource.org/licenses/MIT [pip]: https://pypi.org/project/pip/ -",text/markdown,https://github.com/dioptic/napari-argos-archive-reader,Volker Hilsenstein,hilsenstein@dioptic.de,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['napari', 'numpy', 'scikit-image', 'pydantic', 'ruamel.yaml', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.9,"['Bug Tracker, https://github.com/dioptic/napari-argos-archive-reader/issues', 'Documentation, https://github.com/dioptic/napari-argos-archive-reader#README.md', 'Source Code, https://github.com/dioptic/napari-argos-archive-reader', 'User Support, https://github.com/dioptic/napari-argos-archive-reader/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -89,napari-assistant,0.4.8,napari-assistant,A pocket calculator like interface to image processing in napari,"Robert Haase, Ryan Savill",BSD-3-Clause,https://github.com/haesleinhuepf/napari-assistant/,622874f703b93eb2b11e15a4,['conda'],,https://github.com/haesleinhuepf/napari-assistant,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-assistant,http://api.anaconda.org/packages/conda-forge/napari-assistant,http://anaconda.org/conda-forge/napari-assistant,"['0.1.0', '0.1.2', '0.1.4', '0.1.9', '0.1.10', '0.1.12', '0.2.0', '0.3.4', '0.3.5', '0.3.6', '0.3.7', '0.3.8', '0.3.10', '0.3.11', '0.3.12', '0.3.14', '0.3.16', '0.4.0', '0.4.1', '0.4.2', '0.4.3', '0.4.4', '0.4.5', '0.4.6', '0.4.7', '0.4.8']",0.4.8,0.4.8,['noarch'],55.0,,"['pyha07c04f_0', 'pyhd8ed1ab_0', 'pyhd8ed1ab_1']",0.1.0,conda-forge/napari-assistant/0.1.0,1.0,0.0,2022-03-09 09:35:48.553000+00:00,2024-09-30 05:56:12.369000+00:00,conda,noarch/napari-assistant-0.1.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,True,python,"['loguru', 'magicgui', 'napari >=0.4.14', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pyperclip', 'python >=3.6', 'scikit-image', 'toolz']",noarch,1646818410711.0,None-any-None,pyhd8ed1ab_0,2022-03-09 09:35:49.323000+00:00,b7790f356e80fd20097112397bd32bbd,None,223365.0,conda-forge/napari-assistant/0.1.0/noarch/napari-assistant-0.1.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-assistant/0.1.0/noarch/napari-assistant-0.1.0-pyhd8ed1ab_0.tar.bz2,conda,0.1.0,conda-forge,['main'],public,,0.2.1,napari-assistant.Assistant,Assistant,napari_assistant._gui:Assistant,,,,2.1,napari-assistant,0.4.8,,A pocket calculator like interface to image processing in napari,"# napari-assistant +",text/markdown,https://github.com/dioptic/napari-argos-archive-reader,Volker Hilsenstein,hilsenstein@dioptic.de,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['napari', 'numpy', 'scikit-image', 'pydantic', 'ruamel.yaml', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.9,"['Bug Tracker, https://github.com/dioptic/napari-argos-archive-reader/issues', 'Documentation, https://github.com/dioptic/napari-argos-archive-reader#README.md', 'Source Code, https://github.com/dioptic/napari-argos-archive-reader', 'User Support, https://github.com/dioptic/napari-argos-archive-reader/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +96,napari-assistant,0.4.10,napari-assistant,A pocket calculator like interface to image processing in napari,"Robert Haase, Ryan Savill",BSD-3-Clause,https://github.com/haesleinhuepf/napari-assistant/,622874f703b93eb2b11e15a4,['conda'],,https://github.com/haesleinhuepf/napari-assistant,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-assistant,http://api.anaconda.org/packages/conda-forge/napari-assistant,http://anaconda.org/conda-forge/napari-assistant,"['0.1.0', '0.1.2', '0.1.4', '0.1.9', '0.1.10', '0.1.12', '0.2.0', '0.3.4', '0.3.5', '0.3.6', '0.3.7', '0.3.8', '0.3.10', '0.3.11', '0.3.12', '0.3.14', '0.3.16', '0.4.0', '0.4.1', '0.4.2', '0.4.3', '0.4.4', '0.4.5', '0.4.6', '0.4.7', '0.4.8', '0.4.9', '0.4.10', '0.4.11']",0.4.11,0.4.11,['noarch'],71.0,,"['pyha07c04f_0', 'pyha07c04f_1', 'pyhd8ed1ab_0', 'pyhd8ed1ab_1']",0.1.0,conda-forge/napari-assistant/0.1.0,1.0,0.0,2022-03-09 09:35:48.553000+00:00,2024-12-21 08:02:50.820000+00:00,conda,noarch/napari-assistant-0.1.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,True,python,"['loguru', 'magicgui', 'napari >=0.4.14', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pyperclip', 'python >=3.6', 'scikit-image', 'toolz']",noarch,1646818410711.0,None-any-None,pyhd8ed1ab_0,2022-03-09 09:35:49.323000+00:00,b7790f356e80fd20097112397bd32bbd,None,223365.0,conda-forge/napari-assistant/0.1.0/noarch/napari-assistant-0.1.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-assistant/0.1.0/noarch/napari-assistant-0.1.0-pyhd8ed1ab_0.tar.bz2,conda,0.1.0,conda-forge,['main'],public,,0.2.1,napari-assistant.Assistant,Assistant,napari_assistant._gui:Assistant,,,,2.1,napari-assistant,0.4.10,,A pocket calculator like interface to image processing in napari,"# napari-assistant [![License](https://img.shields.io/pypi/l/napari-assistant.svg?color=green)](https://github.com/haesleinhuepf/napari-assistant/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-assistant.svg?color=green)](https://pypi.org/project/napari-assistant) [![Python Version](https://img.shields.io/pypi/pyversions/napari-assistant.svg?color=green)](https://python.org) @@ -9293,8 +9951,8 @@ This project has been made possible in part by grant number [2021-240341 (Napari [BSD-3]: http://opensource.org/licenses/BSD-3-Clause -",text/markdown,https://github.com/haesleinhuepf/napari-assistant/,"Robert Haase, Ryan Savill",robert.haase@tu-dresden.de,BSD-3-Clause,"['Framework :: napari', 'License :: OSI Approved :: BSD License', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent']","['napari-plugin-engine>=0.1.4', 'toolz', 'napari>=0.4.14', 'magicgui', 'numpy!=1.19.4', 'pyperclip', 'loguru', 'jupytext', 'jupyter', 'pandas', 'napari-time-slicer>=0.4.8', 'napari-workflows>=0.2.10']",>=3.8,"['Bug Tracker, https://github.com/haesleinhuepf/napari-assistant/issues', 'Documentation, https://github.com/haesleinhuepf/napari-assistant/', 'Source Code, https://github.com/haesleinhuepf/napari-assistant', 'User Support, https://forum.image.sc/']",,True,0.1.2,conda-forge/napari-assistant/0.1.2,0.1.4,conda-forge/napari-assistant/0.1.4,0.1.9,conda-forge/napari-assistant/0.1.9,conda,noarch/napari-assistant-0.1.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,True,python,"['loguru', 'magicgui', 'napari >=0.4.14', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pyperclip', 'python >=3.6', 'scikit-image', 'toolz']",pyhd8ed1ab_0,1647791279781.0,None-any-None,noarch,2022-03-20 15:50:40.237000+00:00,e67742de5b1e8674517c24387136d06f,None,232272.0,conda-forge/napari-assistant/0.1.2/noarch/napari-assistant-0.1.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-assistant/0.1.2/noarch/napari-assistant-0.1.2-pyhd8ed1ab_0.tar.bz2,conda,0.1.2,conda-forge,['main'],conda,noarch/napari-assistant-0.1.4-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,True,python,"['loguru', 'magicgui', 'napari >=0.4.14', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pyperclip', 'python >=3.6', 'scikit-image', 'toolz']",noarch,1647803809803.0,None-any-None,pyhd8ed1ab_0,2022-03-20 19:19:34.444000+00:00,0ccf68dd03ad870fa1b223cd0e3fb4f5,None,233330.0,conda-forge/napari-assistant/0.1.4/noarch/napari-assistant-0.1.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-assistant/0.1.4/noarch/napari-assistant-0.1.4-pyhd8ed1ab_0.tar.bz2,conda,0.1.4,conda-forge,['main'],conda,noarch/napari-assistant-0.1.9-pyhd8ed1ab_0.tar.bz2,None-any-None,True,noarch,pyhd8ed1ab_0,0.0,"['loguru', 'magicgui', 'napari >=0.4.14', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pyperclip', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,python,1649683854494.0,2022-04-11 13:33:16.835000+00:00,bb8984669b4925df7bd6f2d0acb5a86f,None,263627.0,conda-forge/napari-assistant/0.1.9/noarch/napari-assistant-0.1.9-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-assistant/0.1.9/noarch/napari-assistant-0.1.9-pyhd8ed1ab_0.tar.bz2,conda,0.1.9,conda-forge,['main'],,napari-assistant.napari_experimental_provide_function,_split_stack,napari_assistant._napari_plugin:napari_experimental_provide_function,,,,,,,napari-assistant.Assistant,Assistant,False,napari-assistant.napari_experimental_provide_function,_split_stack,True,,,,,,,,,,,,,,,,,,,,0.1.10,conda-forge/napari-assistant/0.1.10,0.1.12,conda-forge/napari-assistant/0.1.12,0.2.0,conda-forge/napari-assistant/0.2.0,conda,noarch/napari-assistant-0.1.9-pyhd8ed1ab_1.tar.bz2,1.0,BSD-3-Clause,False,python,"['loguru', 'magicgui', 'napari >=0.4.14', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pyperclip', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",noarch,1650609867115.0,None-any-None,pyhd8ed1ab_1,2022-04-22 06:47:24.271000+00:00,c7fc13c43f1eb32c96c4905f02ad5a70,None,263150.0,conda-forge/napari-assistant/0.1.9/noarch/napari-assistant-0.1.9-pyhd8ed1ab_1.tar.bz2,//api.anaconda.org/download/conda-forge/napari-assistant/0.1.9/noarch/napari-assistant-0.1.9-pyhd8ed1ab_1.tar.bz2,conda,0.1.9,conda-forge,['main'],conda,noarch/napari-assistant-0.1.10-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['loguru', 'magicgui', 'napari >=0.4.14', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pyperclip', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",noarch,1651408769464.0,None-any-None,pyhd8ed1ab_0,2022-05-01 12:42:13.604000+00:00,9142e4f1b31feba298699cd99cf19175,None,273885.0,conda-forge/napari-assistant/0.1.10/noarch/napari-assistant-0.1.10-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-assistant/0.1.10/noarch/napari-assistant-0.1.10-pyhd8ed1ab_0.tar.bz2,conda,0.1.10,conda-forge,['main'],conda,noarch/napari-assistant-0.1.12-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['loguru', 'magicgui', 'napari >=0.4.14', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pyperclip', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,python,1651924658758.0,2022-05-07 12:00:09.875000+00:00,a09af798f900ff1ba10cb7c5eb814d99,None,273986.0,conda-forge/napari-assistant/0.1.12/noarch/napari-assistant-0.1.12-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-assistant/0.1.12/noarch/napari-assistant-0.1.12-pyhd8ed1ab_0.tar.bz2,conda,0.1.12,conda-forge,['main'],,,,,,,0.3.4,conda-forge/napari-assistant/0.3.4,0.3.5,conda-forge/napari-assistant/0.3.5,conda,noarch/napari-assistant-0.2.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['loguru', 'magicgui', 'napari >=0.4.14', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pyperclip', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",noarch,1652014091650.0,None-any-None,pyhd8ed1ab_0,2022-05-08 12:51:09.239000+00:00,de2b75397feb50ce257521c19141646a,None,273880.0,conda-forge/napari-assistant/0.2.0/noarch/napari-assistant-0.2.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-assistant/0.2.0/noarch/napari-assistant-0.2.0-pyhd8ed1ab_0.tar.bz2,conda,0.2.0,conda-forge,['main'],conda,noarch/napari-assistant-0.3.4-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['loguru', 'magicgui', 'napari >=0.4.14', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pyperclip', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,python,1652676106342.0,2022-05-16 04:44:13.015000+00:00,c262019580ce28a7f84d524f7a035459,None,27852.0,conda-forge/napari-assistant/0.3.4/noarch/napari-assistant-0.3.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-assistant/0.3.4/noarch/napari-assistant-0.3.4-pyhd8ed1ab_0.tar.bz2,conda,0.3.4,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,conda,noarch/napari-assistant-0.3.5-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['loguru', 'magicgui', 'napari >=0.4.14', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pyperclip', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,python,1653805296937.0,2022-05-29 06:24:01.512000+00:00,e3f77b79331a1e64ef622e2cd190c3d8,None,290878.0,conda-forge/napari-assistant/0.3.5/noarch/napari-assistant-0.3.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-assistant/0.3.5/noarch/napari-assistant-0.3.5-pyhd8ed1ab_0.tar.bz2,conda,0.3.5,conda-forge,['main'],0.3.6,conda-forge/napari-assistant/0.3.6,conda,noarch/napari-assistant-0.3.6-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['loguru', 'magicgui', 'napari >=0.4.14', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pyperclip', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,1654468157476.0,2022-06-05 22:31:36.058000+00:00,830e79d8ef6133224e123412843ca473,None,290734.0,conda-forge/napari-assistant/0.3.6/noarch/napari-assistant-0.3.6-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-assistant/0.3.6/noarch/napari-assistant-0.3.6-pyhd8ed1ab_0.tar.bz2,conda,0.3.6,conda-forge,['main'],conda,noarch/napari-assistant-0.3.7-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['loguru', 'magicgui', 'napari >=0.4.14', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pyperclip', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,1654540278658.0,2022-06-06 18:33:52.911000+00:00,96f7e564fdac0fa65c634a1d0c6ebe97,None,290707.0,conda-forge/napari-assistant/0.3.7/noarch/napari-assistant-0.3.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-assistant/0.3.7/noarch/napari-assistant-0.3.7-pyhd8ed1ab_0.tar.bz2,conda,0.3.7,conda-forge,['main'],conda,noarch/napari-assistant-0.3.8-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['loguru', 'magicgui', 'napari >=0.4.14', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pyperclip', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,1655329819400.0,2022-06-15 21:53:18.896000+00:00,2018ac7e62062c24eee659946627491e,None,291359.0,conda-forge/napari-assistant/0.3.8/noarch/napari-assistant-0.3.8-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-assistant/0.3.8/noarch/napari-assistant-0.3.8-pyhd8ed1ab_0.tar.bz2,conda,0.3.8,conda-forge,['main'],,, -90,napari-bacseg,1.1.1,BacSEG,"Bacterial segmentation and analysis platform than can inport/export files in multiple formats. Integrating many tools such as Cellpose, ColiCoords, Oufti/MicrobeTracker.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-bacseg.make_qwidget,Make BacSeg QWidget,napari_bacseg._widget:QWidget,,,,2.1,napari-bacseg,1.1.1,,"Bacterial segmentation and analysis platform than can inport/export files in multiple formats. Integrating many tools such as Cellpose, ColiCoords, Oufti/MicrobeTracker.","# napari-BacSEG +",text/markdown,https://github.com/haesleinhuepf/napari-assistant/,"Robert Haase, Ryan Savill",robert.haase@tu-dresden.de,BSD-3-Clause,"['Framework :: napari', 'License :: OSI Approved :: BSD License', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent']","['napari-plugin-engine>=0.1.4', 'toolz', 'napari>=0.4.14', 'magicgui', 'numpy!=1.19.4', 'pyperclip', 'loguru', 'jupytext', 'jupyter', 'pandas', 'napari-time-slicer>=0.4.8', 'napari-workflows>=0.2.10']",>=3.8,"['Bug Tracker, https://github.com/haesleinhuepf/napari-assistant/issues', 'Documentation, https://github.com/haesleinhuepf/napari-assistant/', 'Source Code, https://github.com/haesleinhuepf/napari-assistant', 'User Support, https://forum.image.sc/']",,True,0.1.2,conda-forge/napari-assistant/0.1.2,0.1.4,conda-forge/napari-assistant/0.1.4,0.1.9,conda-forge/napari-assistant/0.1.9,conda,noarch/napari-assistant-0.1.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,True,python,"['loguru', 'magicgui', 'napari >=0.4.14', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pyperclip', 'python >=3.6', 'scikit-image', 'toolz']",pyhd8ed1ab_0,1647791279781.0,None-any-None,noarch,2022-03-20 15:50:40.237000+00:00,e67742de5b1e8674517c24387136d06f,None,232272.0,conda-forge/napari-assistant/0.1.2/noarch/napari-assistant-0.1.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-assistant/0.1.2/noarch/napari-assistant-0.1.2-pyhd8ed1ab_0.tar.bz2,conda,0.1.2,conda-forge,['main'],conda,noarch/napari-assistant-0.1.4-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,True,python,"['loguru', 'magicgui', 'napari >=0.4.14', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pyperclip', 'python >=3.6', 'scikit-image', 'toolz']",noarch,1647803809803.0,None-any-None,pyhd8ed1ab_0,2022-03-20 19:19:34.444000+00:00,0ccf68dd03ad870fa1b223cd0e3fb4f5,None,233330.0,conda-forge/napari-assistant/0.1.4/noarch/napari-assistant-0.1.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-assistant/0.1.4/noarch/napari-assistant-0.1.4-pyhd8ed1ab_0.tar.bz2,conda,0.1.4,conda-forge,['main'],conda,noarch/napari-assistant-0.1.9-pyhd8ed1ab_0.tar.bz2,None-any-None,True,noarch,pyhd8ed1ab_0,0.0,"['loguru', 'magicgui', 'napari >=0.4.14', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pyperclip', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,python,1649683854494.0,2022-04-11 13:33:16.835000+00:00,bb8984669b4925df7bd6f2d0acb5a86f,None,263627.0,conda-forge/napari-assistant/0.1.9/noarch/napari-assistant-0.1.9-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-assistant/0.1.9/noarch/napari-assistant-0.1.9-pyhd8ed1ab_0.tar.bz2,conda,0.1.9,conda-forge,['main'],,napari-assistant.napari_experimental_provide_function,_split_stack,napari_assistant._napari_plugin:napari_experimental_provide_function,,,,,,,napari-assistant.Assistant,Assistant,False,napari-assistant.napari_experimental_provide_function,_split_stack,True,,,,,,,,,,,,,,,,,,,,0.1.10,conda-forge/napari-assistant/0.1.10,0.1.12,conda-forge/napari-assistant/0.1.12,0.2.0,conda-forge/napari-assistant/0.2.0,conda,noarch/napari-assistant-0.1.9-pyhd8ed1ab_1.tar.bz2,1.0,BSD-3-Clause,False,python,"['loguru', 'magicgui', 'napari >=0.4.14', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pyperclip', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",noarch,1650609867115.0,None-any-None,pyhd8ed1ab_1,2022-04-22 06:47:24.271000+00:00,c7fc13c43f1eb32c96c4905f02ad5a70,None,263150.0,conda-forge/napari-assistant/0.1.9/noarch/napari-assistant-0.1.9-pyhd8ed1ab_1.tar.bz2,//api.anaconda.org/download/conda-forge/napari-assistant/0.1.9/noarch/napari-assistant-0.1.9-pyhd8ed1ab_1.tar.bz2,conda,0.1.9,conda-forge,['main'],conda,noarch/napari-assistant-0.1.10-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['loguru', 'magicgui', 'napari >=0.4.14', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pyperclip', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",noarch,1651408769464.0,None-any-None,pyhd8ed1ab_0,2022-05-01 12:42:13.604000+00:00,9142e4f1b31feba298699cd99cf19175,None,273885.0,conda-forge/napari-assistant/0.1.10/noarch/napari-assistant-0.1.10-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-assistant/0.1.10/noarch/napari-assistant-0.1.10-pyhd8ed1ab_0.tar.bz2,conda,0.1.10,conda-forge,['main'],conda,noarch/napari-assistant-0.1.12-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['loguru', 'magicgui', 'napari >=0.4.14', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pyperclip', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,python,1651924658758.0,2022-05-07 12:00:09.875000+00:00,a09af798f900ff1ba10cb7c5eb814d99,None,273986.0,conda-forge/napari-assistant/0.1.12/noarch/napari-assistant-0.1.12-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-assistant/0.1.12/noarch/napari-assistant-0.1.12-pyhd8ed1ab_0.tar.bz2,conda,0.1.12,conda-forge,['main'],,,,,,,0.3.4,conda-forge/napari-assistant/0.3.4,0.3.5,conda-forge/napari-assistant/0.3.5,conda,noarch/napari-assistant-0.2.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['loguru', 'magicgui', 'napari >=0.4.14', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pyperclip', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",noarch,1652014091650.0,None-any-None,pyhd8ed1ab_0,2022-05-08 12:51:09.239000+00:00,de2b75397feb50ce257521c19141646a,None,273880.0,conda-forge/napari-assistant/0.2.0/noarch/napari-assistant-0.2.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-assistant/0.2.0/noarch/napari-assistant-0.2.0-pyhd8ed1ab_0.tar.bz2,conda,0.2.0,conda-forge,['main'],conda,noarch/napari-assistant-0.3.4-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['loguru', 'magicgui', 'napari >=0.4.14', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pyperclip', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,python,1652676106342.0,2022-05-16 04:44:13.015000+00:00,c262019580ce28a7f84d524f7a035459,None,27852.0,conda-forge/napari-assistant/0.3.4/noarch/napari-assistant-0.3.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-assistant/0.3.4/noarch/napari-assistant-0.3.4-pyhd8ed1ab_0.tar.bz2,conda,0.3.4,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,conda,noarch/napari-assistant-0.3.5-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['loguru', 'magicgui', 'napari >=0.4.14', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pyperclip', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,python,1653805296937.0,2022-05-29 06:24:01.512000+00:00,e3f77b79331a1e64ef622e2cd190c3d8,None,290878.0,conda-forge/napari-assistant/0.3.5/noarch/napari-assistant-0.3.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-assistant/0.3.5/noarch/napari-assistant-0.3.5-pyhd8ed1ab_0.tar.bz2,conda,0.3.5,conda-forge,['main'],conda,noarch/napari-assistant-0.3.6-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['loguru', 'magicgui', 'napari >=0.4.14', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pyperclip', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,python,1654468157476.0,2022-06-05 22:31:36.058000+00:00,830e79d8ef6133224e123412843ca473,None,290734.0,conda-forge/napari-assistant/0.3.6/noarch/napari-assistant-0.3.6-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-assistant/0.3.6/noarch/napari-assistant-0.3.6-pyhd8ed1ab_0.tar.bz2,conda,0.3.6,conda-forge,['main'],0.3.6,conda-forge/napari-assistant/0.3.6,conda,noarch/napari-assistant-0.3.7-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['loguru', 'magicgui', 'napari >=0.4.14', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pyperclip', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,1654540278658.0,2022-06-06 18:33:52.911000+00:00,96f7e564fdac0fa65c634a1d0c6ebe97,None,290707.0,conda-forge/napari-assistant/0.3.7/noarch/napari-assistant-0.3.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-assistant/0.3.7/noarch/napari-assistant-0.3.7-pyhd8ed1ab_0.tar.bz2,conda,0.3.7,conda-forge,['main'],0.3.7,conda-forge/napari-assistant/0.3.7,conda,noarch/napari-assistant-0.3.8-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['loguru', 'magicgui', 'napari >=0.4.14', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pyperclip', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,1655329819400.0,2022-06-15 21:53:18.896000+00:00,2018ac7e62062c24eee659946627491e,None,291359.0,conda-forge/napari-assistant/0.3.8/noarch/napari-assistant-0.3.8-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-assistant/0.3.8/noarch/napari-assistant-0.3.8-pyhd8ed1ab_0.tar.bz2,conda,0.3.8,conda-forge,['main'],conda,noarch/napari-assistant-0.3.10-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['loguru', 'magicgui', 'napari >=0.4.14', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pyperclip', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,2022-07-10 18:57:47.934000+00:00,3a0bec2fb769bfaf7c08b9b02dc22f84,None,291497.0,conda-forge/napari-assistant/0.3.10/noarch/napari-assistant-0.3.10-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-assistant/0.3.10/noarch/napari-assistant-0.3.10-pyhd8ed1ab_0.tar.bz2,conda,0.3.10,conda-forge,['main'],,, +97,napari-bacseg,1.1.2,BacSEG,"Bacterial segmentation and analysis platform than can inport/export files in multiple formats. Integrating many tools such as Cellpose, ColiCoords, Oufti/MicrobeTracker.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-bacseg.make_qwidget,Make BacSeg QWidget,napari_bacseg._widget:QWidget,,,,2.1,napari-bacseg,1.1.2,,"Bacterial segmentation and analysis platform than can inport/export files in multiple formats. Integrating many tools such as Cellpose, ColiCoords, Oufti/MicrobeTracker.","# napari-BacSEG [![License BSD-3](https://img.shields.io/pypi/l/napari-bacseg.svg?color=green)](https://github.com/piedrro/napari-bacseg/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-bacseg.svg?color=green)](https://pypi.org/project/napari-bacseg) @@ -9389,8 +10047,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,,,Piers Turner ,,"['Framework :: napari', 'Environment :: Plugins', 'License :: OSI Approved :: BSD License', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent']","['napari[all] ==0.5.0', 'torch', 'cellpose >=3.0.1', 'opencv-python', 'picassosr ==0.6.5', 'bactfit >=0.1.6', 'numpy', 'pyqt5', 'pyqt6', 'qtpy', 'scipy', 'natsort', 'tqdm', 'imagecodecs', 'tifffile', 'pandas', 'mat4py', 'glob2', 'matplotlib', 'scikit-image', 'roifile', 'openpyxl', 'shapely', 'colicoords', 'psutil', 'xmltodict', 'astropy', 'tiler', 'imageio-ffmpeg', 'aicspylibczi', 'czifile', 'omnipose', 'h5py', 'pyqtgraph', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.9,"['Homepage, https://github.com/piedrro/napari-bacseg', 'Bug Tracker, https://github.com/piedrro/napari-bacseg/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-bacseg.make_qwidget,BacSEG,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -91,napari-basicpy,0.0.3,BaSiCpy shadow correction in napari,BaSiCPy illumination correction for napari,Tim Morello,BSD-3-Clause,https://github.com/tdmorello/napari-basicpy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.1.0,napari-basicpy.shadow_correction,Apply BaSiC Shadow Correction,napari_basicpy._widget:BasicWidget,,,,2.1,napari-basicpy,0.0.3,,BaSiCPy illumination correction for napari,"# napari-basicpy +",text/markdown,,,Piers Turner ,,"['Framework :: napari', 'Environment :: Plugins', 'License :: OSI Approved :: BSD License', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent']","['napari[all]==0.5.0', 'torch', 'torchvision', 'cellpose==3.0.1', 'opencv-python', 'picassosr==0.7.3', 'bactfit>=0.1.6', 'numpy', 'pyqt5', 'pyqt6', 'qtpy', 'scipy', 'natsort', 'tqdm', 'imagecodecs', 'tifffile', 'pandas', 'mat4py', 'glob2', 'matplotlib', 'scikit-image', 'roifile', 'openpyxl', 'shapely', 'colicoords', 'psutil', 'xmltodict', 'astropy', 'tiler', 'imageio-ffmpeg', 'aicspylibczi', 'czifile', 'omnipose', 'h5py', 'pyqtgraph', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.9,"['Homepage, https://github.com/piedrro/napari-bacseg', 'Bug Tracker, https://github.com/piedrro/napari-bacseg/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-bacseg.make_qwidget,BacSEG,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +98,napari-basicpy,0.0.3,BaSiCpy shadow correction in napari,BaSiCPy illumination correction for napari,Tim Morello,BSD-3-Clause,https://github.com/tdmorello/napari-basicpy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.1.0,napari-basicpy.shadow_correction,Apply BaSiC Shadow Correction,napari_basicpy._widget:BasicWidget,,,,2.1,napari-basicpy,0.0.3,,BaSiCPy illumination correction for napari,"# napari-basicpy [![License](https://img.shields.io/pypi/l/napari-basicpy.svg?color=green)](https://github.com/tdmorello/napari-basicpy/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-basicpy.svg?color=green)](https://pypi.org/project/napari-basicpy) @@ -9477,8 +10135,8 @@ If you encounter any problems, please [file an issue](https://github.com/peng-la [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/tdmorello/napari-basicpy,Tim Morello,tdmorello@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['basicpy >=1.2.0', 'numpy', 'qtpy', ""black ; extra == 'dev'"", ""flake8 ; extra == 'dev'"", ""flake8-black ; extra == 'dev'"", ""flake8-docstrings ; extra == 'dev'"", ""flake8-isort ; extra == 'dev'"", ""isort ; extra == 'dev'"", ""mypy ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""pydocstyle ; extra == 'dev'"", ""pytest ; extra == 'dev'"", ""pytest-qt ; extra == 'dev'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""tox ; extra == 'tox-testing'"", ""pytest ; extra == 'tox-testing'"", ""pytest-cov ; extra == 'tox-testing'"", ""pytest-qt ; extra == 'tox-testing'"", ""napari ; extra == 'tox-testing'"", ""pyqt5 ; extra == 'tox-testing'""]",>=3.8,"['Bug Tracker, https://github.com/peng-lab/napari-basicpy/issues', 'Documentation, https://github.com/peng-lab/napari-basicpy#README.md', 'Source Code, https://github.com/peng-lab/napari-basicpy', 'User Support, https://github.com/peng-lab/napari-basicpy/issues']","['dev', 'testing', 'tox-testing']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-basicpy.sample_data_random,Provide artifical sample data,napari_basicpy._sample_data:make_sample_data_random,napari-basicpy.sample_data_cell_culture,Provide artifical example,napari_basicpy._sample_data:make_sample_data_cell_culture,napari-basicpy.sample_data_timelapse_brightfield,Provide artifical example,napari_basicpy._sample_data:make_sample_data_timelapse_brightfield,napari-basicpy.shadow_correction,BaSiC Shadow Correction,False,,,,,,,,,,napari-basicpy.sample_data_timelapse_nanog,Provide artifical example,napari_basicpy._sample_data:make_sample_data_timelapse_nanog,,,,,,,,napari-basicpy.sample_data_random,sample_data_random,Random,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-basicpy.sample_data_cell_culture,sample_data_cell_culture,Cell Culture,napari-basicpy.sample_data_timelapse_pu1,Provide artifical example,napari_basicpy._sample_data:make_sample_data_timelapse_pu1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-basicpy.sample_data_wsi_brain,Provide artifical example,napari_basicpy._sample_data:make_sample_data_wsi_brain,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-basicpy.sample_data_timelapse_brightfield,sample_data_timelapse_brightfield,Timelapse Brightfield -92,napari-bbox,0.0.8,Bounding Box,A new layer for bounding boxes in 2+ dimensions,David Bauer,BSD-3-Clause,https://github.com/bauerdavid/napari-bbox,6436f299a989d73a10900e9a,['conda'],,https://github.com/bauerdavid/napari-bbox,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-bbox,http://api.anaconda.org/packages/conda-forge/napari-bbox,http://anaconda.org/conda-forge/napari-bbox,"['0.0.2', '0.0.3']",0.0.2,0.0.3,['noarch'],4.0,https://github.com/bauerdavid/napari-bbox,['pyhd8ed1ab_0'],0.0.2,conda-forge/napari-bbox/0.0.2,1.0,0.0,2023-04-12 18:04:07.457000+00:00,2023-07-28 15:04:26.586000+00:00,conda,noarch/napari-bbox-0.0.2-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8,<3.11', 'qtpy']",noarch,1681322505560.0,None-any-None,pyhd8ed1ab_0,2023-04-12 18:04:07.856000+00:00,1a3a333972d14ce72e9fedfd870acf33,609c89b281db000f69699bfebdc024a8436faf1361af7ad1615a2a15ec4efd3c,48645.0,conda-forge/napari-bbox/0.0.2/noarch/napari-bbox-0.0.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-bbox/0.0.2/noarch/napari-bbox-0.0.2-pyhd8ed1ab_0.conda,conda,0.0.2,conda-forge,['main'],public,,0.2.1,napari-bbox.get_reader,Open data with napari nD Bounding Box,napari_bbox._reader:napari_get_reader,napari-bbox.get_reader,['*.csv'],False,2.1,napari-bbox,0.0.8,,A new layer for bounding boxes in 2+ dimensions,"# napari-bbox +",text/markdown,https://github.com/tdmorello/napari-basicpy,Tim Morello,tdmorello@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['basicpy >=1.2.0', 'numpy', 'qtpy', ""black ; extra == 'dev'"", ""flake8 ; extra == 'dev'"", ""flake8-black ; extra == 'dev'"", ""flake8-docstrings ; extra == 'dev'"", ""flake8-isort ; extra == 'dev'"", ""isort ; extra == 'dev'"", ""mypy ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""pydocstyle ; extra == 'dev'"", ""pytest ; extra == 'dev'"", ""pytest-qt ; extra == 'dev'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""tox ; extra == 'tox-testing'"", ""pytest ; extra == 'tox-testing'"", ""pytest-cov ; extra == 'tox-testing'"", ""pytest-qt ; extra == 'tox-testing'"", ""napari ; extra == 'tox-testing'"", ""pyqt5 ; extra == 'tox-testing'""]",>=3.8,"['Bug Tracker, https://github.com/peng-lab/napari-basicpy/issues', 'Documentation, https://github.com/peng-lab/napari-basicpy#README.md', 'Source Code, https://github.com/peng-lab/napari-basicpy', 'User Support, https://github.com/peng-lab/napari-basicpy/issues']","['dev', 'testing', 'tox-testing']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-basicpy.sample_data_random,Provide artifical sample data,napari_basicpy._sample_data:make_sample_data_random,napari-basicpy.sample_data_cell_culture,Provide artifical example,napari_basicpy._sample_data:make_sample_data_cell_culture,napari-basicpy.sample_data_timelapse_brightfield,Provide artifical example,napari_basicpy._sample_data:make_sample_data_timelapse_brightfield,napari-basicpy.shadow_correction,BaSiC Shadow Correction,False,,,,,,,,,,napari-basicpy.sample_data_timelapse_nanog,Provide artifical example,napari_basicpy._sample_data:make_sample_data_timelapse_nanog,,,,,,,,napari-basicpy.sample_data_random,sample_data_random,Random,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-basicpy.sample_data_cell_culture,sample_data_cell_culture,Cell Culture,napari-basicpy.sample_data_timelapse_pu1,Provide artifical example,napari_basicpy._sample_data:make_sample_data_timelapse_pu1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-basicpy.sample_data_wsi_brain,Provide artifical example,napari_basicpy._sample_data:make_sample_data_wsi_brain,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-basicpy.sample_data_timelapse_brightfield,sample_data_timelapse_brightfield,Timelapse Brightfield +99,napari-bbox,0.0.8,Bounding Box,A new layer for bounding boxes in 2+ dimensions,David Bauer,BSD-3-Clause,https://github.com/bauerdavid/napari-bbox,6436f299a989d73a10900e9a,['conda'],,https://github.com/bauerdavid/napari-bbox,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-bbox,http://api.anaconda.org/packages/conda-forge/napari-bbox,http://anaconda.org/conda-forge/napari-bbox,"['0.0.2', '0.0.3']",0.0.2,0.0.3,['noarch'],4.0,https://github.com/bauerdavid/napari-bbox,['pyhd8ed1ab_0'],0.0.2,conda-forge/napari-bbox/0.0.2,1.0,0.0,2023-04-12 18:04:07.457000+00:00,2023-07-28 15:04:26.586000+00:00,conda,noarch/napari-bbox-0.0.2-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8,<3.11', 'qtpy']",noarch,1681322505560.0,None-any-None,pyhd8ed1ab_0,2023-04-12 18:04:07.856000+00:00,1a3a333972d14ce72e9fedfd870acf33,609c89b281db000f69699bfebdc024a8436faf1361af7ad1615a2a15ec4efd3c,48645.0,conda-forge/napari-bbox/0.0.2/noarch/napari-bbox-0.0.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-bbox/0.0.2/noarch/napari-bbox-0.0.2-pyhd8ed1ab_0.conda,conda,0.0.2,conda-forge,['main'],public,,0.2.1,napari-bbox.get_reader,Open data with napari nD Bounding Box,napari_bbox._reader:napari_get_reader,napari-bbox.get_reader,['*.csv'],False,2.1,napari-bbox,0.0.8,,A new layer for bounding boxes in 2+ dimensions,"# napari-bbox [![License BSD-3](https://img.shields.io/pypi/l/napari-bbox.svg?color=green)](https://github.com/bauerdavid/napari-bbox/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-bbox.svg?color=green)](https://pypi.org/project/napari-bbox) @@ -9554,8 +10212,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/bauerdavid/napari-bbox,David Bauer,dbauer@brc.hu,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'napari>=0.4.15', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.9,"['Bug Tracker, https://github.com/bauerdavid/napari-bbox/issues', 'Documentation, https://github.com/bauerdavid/napari-bbox#README.md', 'Source Code, https://github.com/bauerdavid/napari-bbox', 'User Support, https://github.com/bauerdavid/napari-bbox/issues']",['testing'],False,0.0.3,conda-forge/napari-bbox/0.0.3,,,,,conda,noarch/napari-bbox-0.0.3-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari <0.4.18', 'npe2', 'numpy', 'packaging', 'pandas', 'python >=3.8,<3.11', 'qtpy', 'vispy']",pyhd8ed1ab_0,1690556491313.0,None-any-None,noarch,2023-07-28 15:04:24.602000+00:00,2204bd832b5b5d86976d3a82ae2dbad3,c18e6bd6c62f47b02ea0ea1db0dfcea5376d6e04c91f68ae5f0a23905fa9f372,49189.0,conda-forge/napari-bbox/0.0.3/noarch/napari-bbox-0.0.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-bbox/0.0.3/noarch/napari-bbox-0.0.3-pyhd8ed1ab_0.conda,conda,0.0.3,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-bbox.create_bounding_box_layer_widget,Create Bounding Box Layer,napari_bbox._widget:BoundingBoxCreator,,,,,,,napari-bbox.create_bounding_box_layer_widget,Bounding Box Creator,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -93,napari-bee-annotator,0.0.1,Bee annotator,Napari plugin for the annotation of bee entering and leaving the hive.,Florian Aymanns,BSD-3-Clause,https://github.com/EPFL-Center-for-Imaging/napari-bee-annotator,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-bee-annotator.get_reader,Open tracks data with Bee annotator,napari_bee_annotator._reader:napari_get_reader,napari-bee-annotator.get_reader,['*.csv'],False,2.1,napari-bee-annotator,0.0.1,,Napari plugin for the annotation of bee entering and leaving the hive.," +",text/markdown,https://github.com/bauerdavid/napari-bbox,David Bauer,dbauer@brc.hu,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'napari>=0.4.15', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.9,"['Bug Tracker, https://github.com/bauerdavid/napari-bbox/issues', 'Documentation, https://github.com/bauerdavid/napari-bbox#README.md', 'Source Code, https://github.com/bauerdavid/napari-bbox', 'User Support, https://github.com/bauerdavid/napari-bbox/issues']",['testing'],False,0.0.3,conda-forge/napari-bbox/0.0.3,,,,,conda,noarch/napari-bbox-0.0.3-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari <0.4.18', 'npe2', 'numpy', 'packaging', 'pandas', 'python >=3.8,<3.11', 'qtpy', 'vispy']",pyhd8ed1ab_0,1690556491313.0,None-any-None,noarch,2023-07-28 15:04:24.602000+00:00,2204bd832b5b5d86976d3a82ae2dbad3,c18e6bd6c62f47b02ea0ea1db0dfcea5376d6e04c91f68ae5f0a23905fa9f372,49189.0,conda-forge/napari-bbox/0.0.3/noarch/napari-bbox-0.0.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-bbox/0.0.3/noarch/napari-bbox-0.0.3-pyhd8ed1ab_0.conda,conda,0.0.3,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-bbox.create_bounding_box_layer_widget,Create Bounding Box Layer,napari_bbox._widget:BoundingBoxCreator,,,,,,,napari-bbox.create_bounding_box_layer_widget,Bounding Box Creator,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +100,napari-bee-annotator,0.0.1,Bee annotator,Napari plugin for the annotation of bee entering and leaving the hive.,Florian Aymanns,BSD-3-Clause,https://github.com/EPFL-Center-for-Imaging/napari-bee-annotator,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-bee-annotator.get_reader,Open tracks data with Bee annotator,napari_bee_annotator._reader:napari_get_reader,napari-bee-annotator.get_reader,['*.csv'],False,2.1,napari-bee-annotator,0.0.1,,Napari plugin for the annotation of bee entering and leaving the hive.," # napari-bee-annotator @@ -9622,8 +10280,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/EPFL-Center-for-Imaging/napari-bee-annotator,Florian Aymanns,florian.aymanns@epfl.ch,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/EPFL-Center-for-Imaging/napari-bee-annotator/issues', 'Documentation, https://github.com/EPFL-Center-for-Imaging/napari-bee-annotator#README.md', 'Source Code, https://github.com/EPFL-Center-for-Imaging/napari-bee-annotator', 'User Support, https://github.com/EPFL-Center-for-Imaging/napari-bee-annotator/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['Annotation'],napari-bee-annotator.write_single_tracks_layer,Write tracks layer with Bee annotator,napari_bee_annotator._writer:write_single_tracks_layer,napari-bee-annotator.make_container_widget,Make threshold Container widget,napari_bee_annotator:Annotator,,,,napari-bee-annotator.make_container_widget,Bee annotator,False,,,,,,,,,,,,,napari-bee-annotator.write_single_tracks_layer,['tracks'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['.csv'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -94,napari-bfio,0.0.4,Bfio,A plugin to read and write images using bfio within napari,Sameeul B Samee,MIT,https://github.com/PolusAI/napari-bfio,653cbdcb83c33372c7b17a29,['conda'],,https://pypi.org/project/napari-bfio,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-bfio,http://api.anaconda.org/packages/conda-forge/napari-bfio,http://anaconda.org/conda-forge/napari-bfio,"['0.0.3', '0.0.4']",0.0.4,0.0.4,['noarch'],5.0,https://github.com/PolusAI/napari-bfio,['pyhd8ed1ab_0'],0.0.3,conda-forge/napari-bfio/0.0.3,1.0,0.0,2023-10-28 07:52:41.382000+00:00,2023-10-28 14:04:10.818000+00:00,conda,noarch/napari-bfio-0.0.3-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['bfio', 'numpy', 'python >=3.8']",noarch,1698479468302.0,None-any-None,pyhd8ed1ab_0,2023-10-28 07:52:41.715000+00:00,daec1496dbca89c1243efef50b9f7598,7a1dd1a135625513ad87bbf14d6d385fd2fe6c36d7d5a04793ff8d012b780c65,14190.0,conda-forge/napari-bfio/0.0.3/noarch/napari-bfio-0.0.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-bfio/0.0.3/noarch/napari-bfio-0.0.3-pyhd8ed1ab_0.conda,conda,0.0.3,conda-forge,['main'],public,,0.2.1,napari-bfio.get_reader,Open data with Bfio,napari_bfio._reader:napari_get_reader,napari-bfio.get_reader,"['*.ome.tiff', '*.ome.tif', '*.ome.zarr', '*.tiff', '*.1sc', '*.2fl', '*.acff', '*.afi', '*.afm', '*.aim', '*.al3d', '*.ali', '*.am', '*.amiramesh', '*.apl', '*.arf', '*.avi', '*.bif', '*.bin', '*.bip', '*.bmp', '*.btf', '*.c01', '*.cfg', '*.ch5', '*.cif', '*.cr2', '*.crw', '*.cxd', '*.dat', '*.db', '*.dcm', '*.dib', '*.dicom', '*.dm2', '*.dm3', '*.dm4', '*.dti', '*.dv', '*.eps', '*.epsi', '*.exp', '*.fdf', '*.fff', '*.ffr', '*.fits', '*.flex', '*.fli', '*.frm', '*.gel', '*.gif', '*.grey', '*.h5', '*.hdf', '*.hdr', '*.hed', '*.his', '*.htd', '*.hx', '*.i2i', '*.ics', '*.ids', '*.im3', '*.img', '*.img', '*.ims', '*.inr', '*.ipl', '*.ipm', '*.ipw', '*.j2k', '*.jp2', '*.jpeg', '*.jpf', '*.jpg', '*.jpk', '*.jpx', '*.klb', '*.l2d', '*.labels', '*.lei', '*.lif', '*.liff', '*.lim', '*.lms', '*.lof', '*.lsm', '*.map', '*.mdb', '*.mea', '*.mnc', '*.mng', '*.mod', '*.mov', '*.mrc', '*.mrcs', '*.mrw', '*.msr', '*.mtb', '*.mvd2', '*.naf', '*.nd', '*.nd2', '*.ndpi', '*.ndpis', '*.nef', '*.nhdr', '*.nii', '*.nii.gz', '*.nrrd', '*.obf', '*.obsep', '*.oib', '*.oif', '*.oir', '*.omp2info', '*.par', '*.pbm', '*.pcoraw', '*.pcx', '*.pds', '*.pgm', '*.pic', '*.pict', '*.png', '*.pnl', '*.ppm', '*.pr3', '*.ps', '*.psd', '*.qptiff', '*.r3d', '*.raw', '*.rcpnl', '*.rec', '*.res', '*.scn', '*.sdt', '*.seq', '*.sif', '*.sld', '*.sldy', '*.sm2', '*.sm3', '*.spc', '*.spe', '*.spi', '*.st', '*.stk', '*.stp', '*.svs', '*.sxm', '*.tf2', '*.tf8', '*.tfr', '*.tga', '*.tif', '*.tif', '*.tiff', '*.tnb', '*.top', '*.txt', '*.v', '*.vff', '*.vms', '*.vsi', '*.vws', '*.wat', '*.wpi', '*.xdce', '*.xlef', '*.xqd', '*.xqf', '*.xv', '*.xys', '*.zfp', '*.zfr', '*.zvi']",True,2.1,napari-bfio,0.0.4,,A plugin to read and write images using bfio within napari,"# napari-bfio +",text/markdown,https://github.com/EPFL-Center-for-Imaging/napari-bee-annotator,Florian Aymanns,florian.aymanns@epfl.ch,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/EPFL-Center-for-Imaging/napari-bee-annotator/issues', 'Documentation, https://github.com/EPFL-Center-for-Imaging/napari-bee-annotator#README.md', 'Source Code, https://github.com/EPFL-Center-for-Imaging/napari-bee-annotator', 'User Support, https://github.com/EPFL-Center-for-Imaging/napari-bee-annotator/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['Annotation'],napari-bee-annotator.write_single_tracks_layer,Write tracks layer with Bee annotator,napari_bee_annotator._writer:write_single_tracks_layer,napari-bee-annotator.make_container_widget,Make threshold Container widget,napari_bee_annotator:Annotator,,,,napari-bee-annotator.make_container_widget,Bee annotator,False,,,,,,,,,,,,,napari-bee-annotator.write_single_tracks_layer,['tracks'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['.csv'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +101,napari-bfio,0.0.4,Bfio,A plugin to read and write images using bfio within napari,Sameeul B Samee,MIT,https://github.com/PolusAI/napari-bfio,653cbdcb83c33372c7b17a29,['conda'],,https://pypi.org/project/napari-bfio,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-bfio,http://api.anaconda.org/packages/conda-forge/napari-bfio,http://anaconda.org/conda-forge/napari-bfio,"['0.0.3', '0.0.4']",0.0.4,0.0.4,['noarch'],5.0,https://github.com/PolusAI/napari-bfio,['pyhd8ed1ab_0'],0.0.3,conda-forge/napari-bfio/0.0.3,1.0,0.0,2023-10-28 07:52:41.382000+00:00,2023-10-28 14:04:10.818000+00:00,conda,noarch/napari-bfio-0.0.3-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['bfio', 'numpy', 'python >=3.8']",noarch,1698479468302.0,None-any-None,pyhd8ed1ab_0,2023-10-28 07:52:41.715000+00:00,daec1496dbca89c1243efef50b9f7598,7a1dd1a135625513ad87bbf14d6d385fd2fe6c36d7d5a04793ff8d012b780c65,14190.0,conda-forge/napari-bfio/0.0.3/noarch/napari-bfio-0.0.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-bfio/0.0.3/noarch/napari-bfio-0.0.3-pyhd8ed1ab_0.conda,conda,0.0.3,conda-forge,['main'],public,,0.2.1,napari-bfio.get_reader,Open data with Bfio,napari_bfio._reader:napari_get_reader,napari-bfio.get_reader,"['*.ome.tiff', '*.ome.tif', '*.ome.zarr', '*.tiff', '*.1sc', '*.2fl', '*.acff', '*.afi', '*.afm', '*.aim', '*.al3d', '*.ali', '*.am', '*.amiramesh', '*.apl', '*.arf', '*.avi', '*.bif', '*.bin', '*.bip', '*.bmp', '*.btf', '*.c01', '*.cfg', '*.ch5', '*.cif', '*.cr2', '*.crw', '*.cxd', '*.dat', '*.db', '*.dcm', '*.dib', '*.dicom', '*.dm2', '*.dm3', '*.dm4', '*.dti', '*.dv', '*.eps', '*.epsi', '*.exp', '*.fdf', '*.fff', '*.ffr', '*.fits', '*.flex', '*.fli', '*.frm', '*.gel', '*.gif', '*.grey', '*.h5', '*.hdf', '*.hdr', '*.hed', '*.his', '*.htd', '*.hx', '*.i2i', '*.ics', '*.ids', '*.im3', '*.img', '*.img', '*.ims', '*.inr', '*.ipl', '*.ipm', '*.ipw', '*.j2k', '*.jp2', '*.jpeg', '*.jpf', '*.jpg', '*.jpk', '*.jpx', '*.klb', '*.l2d', '*.labels', '*.lei', '*.lif', '*.liff', '*.lim', '*.lms', '*.lof', '*.lsm', '*.map', '*.mdb', '*.mea', '*.mnc', '*.mng', '*.mod', '*.mov', '*.mrc', '*.mrcs', '*.mrw', '*.msr', '*.mtb', '*.mvd2', '*.naf', '*.nd', '*.nd2', '*.ndpi', '*.ndpis', '*.nef', '*.nhdr', '*.nii', '*.nii.gz', '*.nrrd', '*.obf', '*.obsep', '*.oib', '*.oif', '*.oir', '*.omp2info', '*.par', '*.pbm', '*.pcoraw', '*.pcx', '*.pds', '*.pgm', '*.pic', '*.pict', '*.png', '*.pnl', '*.ppm', '*.pr3', '*.ps', '*.psd', '*.qptiff', '*.r3d', '*.raw', '*.rcpnl', '*.rec', '*.res', '*.scn', '*.sdt', '*.seq', '*.sif', '*.sld', '*.sldy', '*.sm2', '*.sm3', '*.spc', '*.spe', '*.spi', '*.st', '*.stk', '*.stp', '*.svs', '*.sxm', '*.tf2', '*.tf8', '*.tfr', '*.tga', '*.tif', '*.tif', '*.tiff', '*.tnb', '*.top', '*.txt', '*.v', '*.vff', '*.vms', '*.vsi', '*.vws', '*.wat', '*.wpi', '*.xdce', '*.xlef', '*.xqd', '*.xqf', '*.xv', '*.xys', '*.zfp', '*.zfr', '*.zvi']",True,2.1,napari-bfio,0.0.4,,A plugin to read and write images using bfio within napari,"# napari-bfio [![License MIT](https://img.shields.io/pypi/l/napari-bfio.svg?color=green)](https://github.com/PolusAI/napari-bfio/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-bfio.svg?color=green)](https://pypi.org/project/napari-bfio) @@ -9690,8 +10348,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/PolusAI/napari-bfio,Sameeul B Samee,sameeul.samee@nih.gov,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'bfio >=2.3.1', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/PolusAI/napari-bfio/issues', 'Documentation, https://github.com/PolusAI/napari-bfio#README.md', 'Source Code, https://github.com/PolusAI/napari-bfio', 'User Support, https://github.com/PolusAI/napari-bfio/issues']",['testing'],False,0.0.4,conda-forge/napari-bfio/0.0.4,,,,,conda,noarch/napari-bfio-0.0.4-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['bfio', 'numpy', 'python >=3.8']",pyhd8ed1ab_0,1698501768407.0,None-any-None,noarch,2023-10-28 14:04:01.501000+00:00,e0836fc62f69d022c8bae0ef7ea13936,6fbe868e4a862f8af20e4656db2ba0c7e098cbb3b29accb9df967363d4b967ca,13719.0,conda-forge/napari-bfio/0.0.4/noarch/napari-bfio-0.0.4-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-bfio/0.0.4/noarch/napari-bfio-0.0.4-pyhd8ed1ab_0.conda,conda,0.0.4,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-bfio.write_single_image,Save image data with Bfio,napari_bfio._writer:write_single_image,,,,,,,,,,,,,,,,,,,,,,napari-bfio.write_single_image,['image'],,napari-bfio.write_single_image,['labels'],"['.ome.tiff', '.ome.tif', '.ome.zarr']",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['.ome.tiff', '.ome.tif', '.ome.zarr']",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -95,napari-bigfish,0.4,BigFISH smFISH Analysis,A napari-plugin providing an alternative GUI for Big-FISH. Big-FISH is a python package for the analysis of smFISH images.,Volker Baecker,MIT,https://github.com/MontpellierRessourcesImagerie/napari-bigfish,643dbbe79779ec69dd4ac671,['conda'],,https://github.com/MontpellierRessourcesImagerie/napari-bigfish,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-bigfish,http://api.anaconda.org/packages/conda-forge/napari-bigfish,http://anaconda.org/conda-forge/napari-bigfish,"['0.3', '0.4']",0.4,0.4,['noarch'],4.0,,['pyhd8ed1ab_0'],0.3,conda-forge/napari-bigfish/0.3,1.0,0.0,2023-04-17 21:36:36.796000+00:00,2023-06-18 17:28:02.364000+00:00,conda,noarch/napari-bigfish-0.3-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['big-fish', 'magicgui', 'napari', 'numpy', 'pyperclip', 'python >=3.8', 'qtpy']",noarch,1681767227002.0,None-any-None,pyhd8ed1ab_0,2023-04-17 21:36:37.355000+00:00,14e9667e5e16af12e030962c3d3bab6b,1086974dbe501e80b96846a4c1c72a07aa81fcb40fe5b6213dba964b0cb57972,27248.0,conda-forge/napari-bigfish/0.3/noarch/napari-bigfish-0.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-bigfish/0.3/noarch/napari-bigfish-0.3-pyhd8ed1ab_0.conda,conda,0.3,conda-forge,['main'],public,,0.2.1,napari-bigfish.make_sample_data,Load sample data from BigFISH smFISH Analysis,napari_bigfish._sample_data:make_sample_data,,,,2.1,napari-bigfish,0.4,,A napari-plugin providing an alternative GUI for Big-FISH. Big-FISH is a python package for the analysis of smFISH images.," # napari-bigfish +",text/markdown,https://github.com/PolusAI/napari-bfio,Sameeul B Samee,sameeul.samee@nih.gov,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'bfio >=2.3.1', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/PolusAI/napari-bfio/issues', 'Documentation, https://github.com/PolusAI/napari-bfio#README.md', 'Source Code, https://github.com/PolusAI/napari-bfio', 'User Support, https://github.com/PolusAI/napari-bfio/issues']",['testing'],False,0.0.4,conda-forge/napari-bfio/0.0.4,,,,,conda,noarch/napari-bfio-0.0.4-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['bfio', 'numpy', 'python >=3.8']",pyhd8ed1ab_0,1698501768407.0,None-any-None,noarch,2023-10-28 14:04:01.501000+00:00,e0836fc62f69d022c8bae0ef7ea13936,6fbe868e4a862f8af20e4656db2ba0c7e098cbb3b29accb9df967363d4b967ca,13719.0,conda-forge/napari-bfio/0.0.4/noarch/napari-bfio-0.0.4-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-bfio/0.0.4/noarch/napari-bfio-0.0.4-pyhd8ed1ab_0.conda,conda,0.0.4,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-bfio.write_single_image,Save image data with Bfio,napari_bfio._writer:write_single_image,,,,,,,,,,,,,,,,,,,,,,napari-bfio.write_single_image,['image'],,napari-bfio.write_single_image,['labels'],"['.ome.tiff', '.ome.tif', '.ome.zarr']",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['.ome.tiff', '.ome.tif', '.ome.zarr']",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +102,napari-bigfish,0.4,BigFISH smFISH Analysis,A napari-plugin providing an alternative GUI for Big-FISH. Big-FISH is a python package for the analysis of smFISH images.,Volker Baecker,MIT,https://github.com/MontpellierRessourcesImagerie/napari-bigfish,643dbbe79779ec69dd4ac671,['conda'],,https://github.com/MontpellierRessourcesImagerie/napari-bigfish,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-bigfish,http://api.anaconda.org/packages/conda-forge/napari-bigfish,http://anaconda.org/conda-forge/napari-bigfish,"['0.3', '0.4']",0.4,0.4,['noarch'],4.0,,['pyhd8ed1ab_0'],0.3,conda-forge/napari-bigfish/0.3,1.0,0.0,2023-04-17 21:36:36.796000+00:00,2023-06-18 17:28:02.364000+00:00,conda,noarch/napari-bigfish-0.3-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['big-fish', 'magicgui', 'napari', 'numpy', 'pyperclip', 'python >=3.8', 'qtpy']",noarch,1681767227002.0,None-any-None,pyhd8ed1ab_0,2023-04-17 21:36:37.355000+00:00,14e9667e5e16af12e030962c3d3bab6b,1086974dbe501e80b96846a4c1c72a07aa81fcb40fe5b6213dba964b0cb57972,27248.0,conda-forge/napari-bigfish/0.3/noarch/napari-bigfish-0.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-bigfish/0.3/noarch/napari-bigfish-0.3-pyhd8ed1ab_0.conda,conda,0.3,conda-forge,['main'],public,,0.2.1,napari-bigfish.make_sample_data,Load sample data from BigFISH smFISH Analysis,napari_bigfish._sample_data:make_sample_data,,,,2.1,napari-bigfish,0.4,,A napari-plugin providing an alternative GUI for Big-FISH. Big-FISH is a python package for the analysis of smFISH images.," # napari-bigfish [![License MIT](https://img.shields.io/pypi/l/napari-bigfish.svg?color=green)](https://github.com/MontpellierRessourcesImagerie/napari-bigfish/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-bigfish.svg?color=green)](https://pypi.org/project/napari-bigfish) @@ -9761,8 +10419,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/MontpellierRessourcesImagerie/napari-bigfish,Volker Baecker,volker.baecker@mri.cnrs.fr,MIT,"['Development Status :: 4 - Beta', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'pyperclip', 'big-fish', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/MontpellierRessourcesImagerie/napari-bigfish/issues', 'Documentation, https://montpellierressourcesimagerie.github.io/napari-bigfish/', 'Source Code, https://github.com/MontpellierRessourcesImagerie/napari-bigfish', 'User Support, https://github.com/MontpellierRessourcesImagerie/napari-bigfish/issues']",['testing'],False,0.4,conda-forge/napari-bigfish/0.4,,,,,conda,noarch/napari-bigfish-0.4-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['big-fish', 'magicgui', 'napari', 'numpy', 'pyperclip', 'python >=3.8', 'qtpy', 'scikit-image']",pyhd8ed1ab_0,1681922846180.0,None-any-None,noarch,2023-04-19 16:50:25.402000+00:00,17bd0c3db46db3a597ac2d75aa441ead,3398daecf8bd23077338d098663e2ea470b3b9a4522959bb2a320b44e3d52432,27206.0,conda-forge/napari-bigfish/0.4/noarch/napari-bigfish-0.4-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-bigfish/0.4/noarch/napari-bigfish-0.4-pyhd8ed1ab_0.conda,conda,0.4,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-bigfish.make_qwidget,Make DetectFISHSpotsWidget QWidget,napari_bigfish._widget:DetectFISHSpotsWidget,,,,,,,napari-bigfish.make_qwidget,Detect FISH spots,False,,,,,,,,,,,,,,,,,,,,napari-bigfish.make_sample_data,unique_id.1,BigFISH smFISH Analysis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -96,napari-bigwarp,0.0.1,napari-bigwarp,BigWarp-like interface for napari,Ben Kantor,BSD-3-Clause,https://github.com/bkntr/napari-bigwarp,62c55c90e8e8f335442520f2,['conda'],,https://github.com/bkntr/napari-bigwarp,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-bigwarp,http://api.anaconda.org/packages/conda-forge/napari-bigwarp,http://anaconda.org/conda-forge/napari-bigwarp,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-bigwarp/0.0.1,1.0,0.0,2022-07-06 09:57:33.614000+00:00,2023-06-18 08:42:02.100000+00:00,conda,noarch/napari-bigwarp-0.0.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'opencv', 'python >=3.7']",noarch,1657101279688.0,None-any-None,pyhd8ed1ab_0,2022-07-06 09:57:34.150000+00:00,87d1b99784dbea8b4bca7c5ac21dad3e,None,10617.0,conda-forge/napari-bigwarp/0.0.1/noarch/napari-bigwarp-0.0.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-bigwarp/0.0.1/noarch/napari-bigwarp-0.0.1-pyhd8ed1ab_0.tar.bz2,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-bigwarp.BigWarpQWidget,BigWarpQWidget,napari_bigwarp._bigwarp_widget:BigWarpQWidget,,,,2.1,napari-bigwarp,0.0.1,['UNKNOWN'],BigWarp-like interface for napari,"# napari-bigwarp +",text/markdown,https://github.com/MontpellierRessourcesImagerie/napari-bigfish,Volker Baecker,volker.baecker@mri.cnrs.fr,MIT,"['Development Status :: 4 - Beta', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'pyperclip', 'big-fish', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/MontpellierRessourcesImagerie/napari-bigfish/issues', 'Documentation, https://montpellierressourcesimagerie.github.io/napari-bigfish/', 'Source Code, https://github.com/MontpellierRessourcesImagerie/napari-bigfish', 'User Support, https://github.com/MontpellierRessourcesImagerie/napari-bigfish/issues']",['testing'],False,0.4,conda-forge/napari-bigfish/0.4,,,,,conda,noarch/napari-bigfish-0.4-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['big-fish', 'magicgui', 'napari', 'numpy', 'pyperclip', 'python >=3.8', 'qtpy', 'scikit-image']",pyhd8ed1ab_0,1681922846180.0,None-any-None,noarch,2023-04-19 16:50:25.402000+00:00,17bd0c3db46db3a597ac2d75aa441ead,3398daecf8bd23077338d098663e2ea470b3b9a4522959bb2a320b44e3d52432,27206.0,conda-forge/napari-bigfish/0.4/noarch/napari-bigfish-0.4-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-bigfish/0.4/noarch/napari-bigfish-0.4-pyhd8ed1ab_0.conda,conda,0.4,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-bigfish.make_qwidget,Make DetectFISHSpotsWidget QWidget,napari_bigfish._widget:DetectFISHSpotsWidget,,,,,,,napari-bigfish.make_qwidget,Detect FISH spots,False,,,,,,,,,,,,,,,,,,,,napari-bigfish.make_sample_data,unique_id.1,BigFISH smFISH Analysis,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +103,napari-bigwarp,0.0.1,napari-bigwarp,BigWarp-like interface for napari,Ben Kantor,BSD-3-Clause,https://github.com/bkntr/napari-bigwarp,62c55c90e8e8f335442520f2,['conda'],,https://github.com/bkntr/napari-bigwarp,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-bigwarp,http://api.anaconda.org/packages/conda-forge/napari-bigwarp,http://anaconda.org/conda-forge/napari-bigwarp,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-bigwarp/0.0.1,1.0,0.0,2022-07-06 09:57:33.614000+00:00,2023-06-18 08:42:02.100000+00:00,conda,noarch/napari-bigwarp-0.0.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'opencv', 'python >=3.7']",noarch,1657101279688.0,None-any-None,pyhd8ed1ab_0,2022-07-06 09:57:34.150000+00:00,87d1b99784dbea8b4bca7c5ac21dad3e,None,10617.0,conda-forge/napari-bigwarp/0.0.1/noarch/napari-bigwarp-0.0.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-bigwarp/0.0.1/noarch/napari-bigwarp-0.0.1-pyhd8ed1ab_0.tar.bz2,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-bigwarp.BigWarpQWidget,BigWarpQWidget,napari_bigwarp._bigwarp_widget:BigWarpQWidget,,,,2.1,napari-bigwarp,0.0.1,['UNKNOWN'],BigWarp-like interface for napari,"# napari-bigwarp [![License](https://img.shields.io/pypi/l/napari-bigwarp.svg?color=green)](https://github.com/bkntr/napari-bigwarp/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-bigwarp.svg?color=green)](https://pypi.org/project/napari-bigwarp) @@ -9831,8 +10489,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/bkntr/napari-bigwarp,Ben Kantor,benkantor@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'opencv-contrib-python', 'opencv-python']",>=3.7,"['Bug Tracker, https://github.com/bkntr/napari-bigwarp/issues', 'Documentation, https://github.com/bkntr/napari-bigwarp#README.md', 'Source Code, https://github.com/bkntr/napari-bigwarp', 'User Support, https://github.com/bkntr/napari-bigwarp/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-bigwarp.BigWarpQWidget,BigWarpQWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -97,napari-bil-data-viewer,0.6.0,napari-bil-data-viewer,Napari plugin for viewing Brain Image Library datasets,Alan M Watson,BSD-3-Clause,https://github.com/brain-image-library/napari-bil-data-viewer,6204fa9041ba87b014a8189c,['conda'],,https://github.com/brain-image-library/napari-bil-data-viewer,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-bil-data-viewer,http://api.anaconda.org/packages/conda-forge/napari-bil-data-viewer,http://anaconda.org/conda-forge/napari-bil-data-viewer,['0.1.2'],0.1.2,0.1.2,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.2,conda-forge/napari-bil-data-viewer/0.1.2,1.0,0.0,2022-02-10 11:44:13.702000+00:00,2023-06-18 08:40:48.938000+00:00,conda,noarch/napari-bil-data-viewer-0.1.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['aiohttp', 'beautifulsoup4', 'dask-core', 'fsspec', 'imagecodecs', 'napari', 'napari-plugin-engine >=0.1.4', 'python >=3.8', 'requests', 'scikit-image']",noarch,1644493280018.0,None-any-None,pyhd8ed1ab_0,2022-02-10 11:44:14.232000+00:00,085cc86a71a9ccd4837a323eab1676ad,None,11306.0,conda-forge/napari-bil-data-viewer/0.1.2/noarch/napari-bil-data-viewer-0.1.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-bil-data-viewer/0.1.2/noarch/napari-bil-data-viewer-0.1.2-pyhd8ed1ab_0.tar.bz2,conda,0.1.2,conda-forge,['main'],public,,0.2.1,napari-bil-data-viewer.napari_get_reader,napari_get_reader,napari_bil_data_viewer.reader:napari_get_reader,napari-bil-data-viewer.napari_get_reader,['*'],True,2.1,napari-bil-data-viewer,0.6.0,,Napari plugin for viewing Brain Image Library datasets,"

+",text/markdown,https://github.com/bkntr/napari-bigwarp,Ben Kantor,benkantor@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'opencv-contrib-python', 'opencv-python']",>=3.7,"['Bug Tracker, https://github.com/bkntr/napari-bigwarp/issues', 'Documentation, https://github.com/bkntr/napari-bigwarp#README.md', 'Source Code, https://github.com/bkntr/napari-bigwarp', 'User Support, https://github.com/bkntr/napari-bigwarp/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-bigwarp.BigWarpQWidget,BigWarpQWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +104,napari-bil-data-viewer,0.6.0,napari-bil-data-viewer,Napari plugin for viewing Brain Image Library datasets,Alan M Watson,BSD-3-Clause,https://github.com/brain-image-library/napari-bil-data-viewer,6204fa9041ba87b014a8189c,['conda'],,https://github.com/brain-image-library/napari-bil-data-viewer,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-bil-data-viewer,http://api.anaconda.org/packages/conda-forge/napari-bil-data-viewer,http://anaconda.org/conda-forge/napari-bil-data-viewer,['0.1.2'],0.1.2,0.1.2,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.2,conda-forge/napari-bil-data-viewer/0.1.2,1.0,0.0,2022-02-10 11:44:13.702000+00:00,2023-06-18 08:40:48.938000+00:00,conda,noarch/napari-bil-data-viewer-0.1.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['aiohttp', 'beautifulsoup4', 'dask-core', 'fsspec', 'imagecodecs', 'napari', 'napari-plugin-engine >=0.1.4', 'python >=3.8', 'requests', 'scikit-image']",noarch,1644493280018.0,None-any-None,pyhd8ed1ab_0,2022-02-10 11:44:14.232000+00:00,085cc86a71a9ccd4837a323eab1676ad,None,11306.0,conda-forge/napari-bil-data-viewer/0.1.2/noarch/napari-bil-data-viewer-0.1.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-bil-data-viewer/0.1.2/noarch/napari-bil-data-viewer-0.1.2-pyhd8ed1ab_0.tar.bz2,conda,0.1.2,conda-forge,['main'],public,,0.2.1,napari-bil-data-viewer.napari_get_reader,napari_get_reader,napari_bil_data_viewer.reader:napari_get_reader,napari-bil-data-viewer.napari_get_reader,['*'],True,2.1,napari-bil-data-viewer,0.6.0,,Napari plugin for viewing Brain Image Library datasets,"

@@ -9976,8 +10634,8 @@ Add metadata link to curated datasets **v0.6.0:** Add widget to visualize histology RGB tiffs -",text/markdown,https://github.com/brain-image-library/napari-bil-data-viewer,Alan M Watson,alan.watson@pitt.edu,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari[all]', 'napari-plugin-engine >=0.1.4', 'scikit-image', 'fsspec', 'requests', 'aiohttp', 'imagecodecs', 'beautifulsoup4', 'dask', 'neurom ==3.2.2', 'napari-ome-zarr ==0.5.2']",>=3.8,"['Bug Tracker, https://github.com/brain-image-library/napari-bil-data-viewer/issues', 'Documentation, https://github.com/brain-image-library/napari-bil-data-viewer#README.md', 'Source Code, https://github.com/brain-image-library/napari-bil-data-viewer', 'User Support, https://github.com/brain-image-library/napari-bil-data-viewer']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-bil-data-viewer.LoadCuratedDatasets,LoadCuratedDatasets,False,napari-bil-data-viewer.LoadImageStackFromURL,LoadImageStackFromURL,False,napari-bil-data-viewer.LoadMultiscaleDataFromURL,LoadMultiscaleDataFromURL,False,napari-bil-data-viewer.LoadNeuronMorphologyFromURL,LoadNeuronMorphologyFromURL,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-bil-data-viewer.LayerScaleControls,LayerScaleControls,False,napari-bil-data-viewer.LoadHistologyImageFromURL,LoadHistologyImageFromURL,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -98,napari-bio-sample-data,0.0.4,napari bio sample data,a sample data plugin for bio-related demos,Chi-Li Chiu,BSD-3-Clause,https://github.com/chili-chiu/napari-bio-sample-data,6355c6dac9c280cbc0daa238,['conda'],,https://github.com/chili-chiu/napari-bio-sample-data,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-bio-sample-data,http://api.anaconda.org/packages/conda-forge/napari-bio-sample-data,http://anaconda.org/conda-forge/napari-bio-sample-data,['0.0.4'],0.0.4,0.0.4,['noarch'],3.0,,['pyhd8ed1ab_1'],0.0.4,conda-forge/napari-bio-sample-data/0.0.4,1.0,0.0,2022-08-18 13:28:12.815000+00:00,2023-06-18 08:42:50.267000+00:00,conda,noarch/napari-bio-sample-data-0.0.4-pyhd8ed1ab_1.tar.bz2,1.0,BSD-3-Clause AND CC-PDDC AND LicenseRef-AllenInstitute AND LicenseRef-CellTrackingChallenge AND CC-BY-4.0,False,python,"['aiobotocore >=1.0.1', 'dask-core', 'fsspec', 'napari', 'numpy', 'python >=3.8', 's3fs', 'scikit-image', 'zarr >=2.12.0']",noarch,1666565706466.0,None-any-None,pyhd8ed1ab_1,2022-10-23 22:57:27.642000+00:00,38cb87272dbf594e945b483da80078ee,None,20440677.0,conda-forge/napari-bio-sample-data/0.0.4/noarch/napari-bio-sample-data-0.0.4-pyhd8ed1ab_1.tar.bz2,//api.anaconda.org/download/conda-forge/napari-bio-sample-data/0.0.4/noarch/napari-bio-sample-data-0.0.4-pyhd8ed1ab_1.tar.bz2,conda,0.0.4,conda-forge,['main'],public,,0.2.1,napari-bio-sample-data.tomo_data,Load data,napari_bio_sample_data._sample_data:tomo_data,,,,2.1,napari-bio-sample-data,0.0.4,,a sample data plugin for bio-related demos,"# napari-bio-sample-data +",text/markdown,https://github.com/brain-image-library/napari-bil-data-viewer,Alan M Watson,alan.watson@pitt.edu,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari[all]', 'napari-plugin-engine >=0.1.4', 'scikit-image', 'fsspec', 'requests', 'aiohttp', 'imagecodecs', 'beautifulsoup4', 'dask', 'neurom ==3.2.2', 'napari-ome-zarr ==0.5.2']",>=3.8,"['Bug Tracker, https://github.com/brain-image-library/napari-bil-data-viewer/issues', 'Documentation, https://github.com/brain-image-library/napari-bil-data-viewer#README.md', 'Source Code, https://github.com/brain-image-library/napari-bil-data-viewer', 'User Support, https://github.com/brain-image-library/napari-bil-data-viewer']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-bil-data-viewer.LoadCuratedDatasets,LoadCuratedDatasets,False,napari-bil-data-viewer.LoadImageStackFromURL,LoadImageStackFromURL,False,napari-bil-data-viewer.LoadMultiscaleDataFromURL,LoadMultiscaleDataFromURL,False,napari-bil-data-viewer.LoadNeuronMorphologyFromURL,LoadNeuronMorphologyFromURL,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-bil-data-viewer.LayerScaleControls,LayerScaleControls,False,napari-bil-data-viewer.LoadHistologyImageFromURL,LoadHistologyImageFromURL,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +105,napari-bio-sample-data,0.0.4,napari bio sample data,a sample data plugin for bio-related demos,Chi-Li Chiu,BSD-3-Clause,https://github.com/chili-chiu/napari-bio-sample-data,6355c6dac9c280cbc0daa238,['conda'],,https://github.com/chili-chiu/napari-bio-sample-data,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-bio-sample-data,http://api.anaconda.org/packages/conda-forge/napari-bio-sample-data,http://anaconda.org/conda-forge/napari-bio-sample-data,['0.0.4'],0.0.4,0.0.4,['noarch'],3.0,,['pyhd8ed1ab_1'],0.0.4,conda-forge/napari-bio-sample-data/0.0.4,1.0,0.0,2022-08-18 13:28:12.815000+00:00,2023-06-18 08:42:50.267000+00:00,conda,noarch/napari-bio-sample-data-0.0.4-pyhd8ed1ab_1.tar.bz2,1.0,BSD-3-Clause AND CC-PDDC AND LicenseRef-AllenInstitute AND LicenseRef-CellTrackingChallenge AND CC-BY-4.0,False,python,"['aiobotocore >=1.0.1', 'dask-core', 'fsspec', 'napari', 'numpy', 'python >=3.8', 's3fs', 'scikit-image', 'zarr >=2.12.0']",noarch,1666565706466.0,None-any-None,pyhd8ed1ab_1,2022-10-23 22:57:27.642000+00:00,38cb87272dbf594e945b483da80078ee,None,20440677.0,conda-forge/napari-bio-sample-data/0.0.4/noarch/napari-bio-sample-data-0.0.4-pyhd8ed1ab_1.tar.bz2,//api.anaconda.org/download/conda-forge/napari-bio-sample-data/0.0.4/noarch/napari-bio-sample-data-0.0.4-pyhd8ed1ab_1.tar.bz2,conda,0.0.4,conda-forge,['main'],public,,0.2.1,napari-bio-sample-data.tomo_data,Load data,napari_bio_sample_data._sample_data:tomo_data,,,,2.1,napari-bio-sample-data,0.0.4,,a sample data plugin for bio-related demos,"# napari-bio-sample-data [![License](https://img.shields.io/pypi/l/napari-bio-sample-data.svg?color=green)](https://github.com/chili-chiu/napari-bio-sample-data/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-bio-sample-data.svg?color=green)](https://pypi.org/project/napari-bio-sample-data) @@ -10067,8 +10725,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/chili-chiu/napari-bio-sample-data,Chi-Li Chiu,cchiu@chanzuckerberg.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['numpy', 'fsspec', 'zarr (>=2.12.0)', 'dask', 's3fs', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/chili-chiu/napari-bio-sample-data/issues', 'Documentation, https://github.com/chili-chiu/napari-bio-sample-data#README.md', 'Source Code, https://github.com/chili-chiu/napari-bio-sample-data', 'User Support, https://github.com/chili-chiu/napari-bio-sample-data/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-bio-sample-data.skin_data,Load data,napari_bio_sample_data._sample_data:skin_data,napari-bio-sample-data.nuclei_data,Load data,napari_bio_sample_data._sample_data:nuclei_data,napari-bio-sample-data.timelapse_data,Load data,napari_bio_sample_data._sample_data:timelapse_data,,,,,,,,,,,,,napari-bio-sample-data.large_data,Load data,napari_bio_sample_data._sample_data:large_data,,,,,,,,napari-bio-sample-data.tomo_data,unique_id.0,3D cryo-tomography,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-bio-sample-data.skin_data,unique_id.1,2D skin HE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-bio-sample-data.nuclei_data,unique_id.2,3D nuclei -99,napari-bioformats,0.2.1,napari-bioformats,"Bioformats for napari, using pims",Talley Lambert,GPL-3.0,https://github.com/tlambert03/napari-bioformats,60e8732d33011334b8a2d750,['conda'],,https://github.com/tlambert03/napari-bioformats,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-bioformats,http://api.anaconda.org/packages/conda-forge/napari-bioformats,http://anaconda.org/conda-forge/napari-bioformats,"['0.1.1', '0.1.2']",0.1.2,0.1.2,['noarch'],4.0,https://github.com/tlambert03/napari-bioformats,['pyhd8ed1ab_0'],0.1.1,conda-forge/napari-bioformats/0.1.1,1.0,0.0,2021-07-09 16:02:50.671000+00:00,2023-06-16 19:26:47.973000+00:00,conda,noarch/napari-bioformats-0.1.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['jpype1', 'napari-plugin-engine >=0.1.4', 'numpy', 'ome-types', 'pims', 'python >=3.7']",noarch,1625846500941.0,None-any-None,pyhd8ed1ab_0,2021-07-09 16:02:51.248000+00:00,0b1fb5e33b2132ae8878b652e71d7867,None,12209.0,conda-forge/napari-bioformats/0.1.1/noarch/napari-bioformats-0.1.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-bioformats/0.1.1/noarch/napari-bioformats-0.1.1-pyhd8ed1ab_0.tar.bz2,conda,0.1.1,conda-forge,['main'],public,,0.2.1,napari-bioformats.napari_get_reader,napari_get_reader,napari_bioformats._core:napari_get_reader,napari-bioformats.napari_get_reader,['*'],True,2.1,napari-bioformats,0.2.1,['UNKNOWN'],"Bioformats for napari, using pims","# napari-bioformats +",text/markdown,https://github.com/chili-chiu/napari-bio-sample-data,Chi-Li Chiu,cchiu@chanzuckerberg.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['numpy', 'fsspec', 'zarr (>=2.12.0)', 'dask', 's3fs', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/chili-chiu/napari-bio-sample-data/issues', 'Documentation, https://github.com/chili-chiu/napari-bio-sample-data#README.md', 'Source Code, https://github.com/chili-chiu/napari-bio-sample-data', 'User Support, https://github.com/chili-chiu/napari-bio-sample-data/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-bio-sample-data.skin_data,Load data,napari_bio_sample_data._sample_data:skin_data,napari-bio-sample-data.nuclei_data,Load data,napari_bio_sample_data._sample_data:nuclei_data,napari-bio-sample-data.timelapse_data,Load data,napari_bio_sample_data._sample_data:timelapse_data,,,,,,,,,,,,,napari-bio-sample-data.large_data,Load data,napari_bio_sample_data._sample_data:large_data,,,,,,,,napari-bio-sample-data.tomo_data,unique_id.0,3D cryo-tomography,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-bio-sample-data.skin_data,unique_id.1,2D skin HE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-bio-sample-data.nuclei_data,unique_id.2,3D nuclei +106,napari-bioformats,0.2.1,napari-bioformats,"Bioformats for napari, using pims",Talley Lambert,GPL-3.0,https://github.com/tlambert03/napari-bioformats,60e8732d33011334b8a2d750,['conda'],,https://github.com/tlambert03/napari-bioformats,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-bioformats,http://api.anaconda.org/packages/conda-forge/napari-bioformats,http://anaconda.org/conda-forge/napari-bioformats,"['0.1.1', '0.1.2']",0.1.2,0.1.2,['noarch'],4.0,https://github.com/tlambert03/napari-bioformats,['pyhd8ed1ab_0'],0.1.1,conda-forge/napari-bioformats/0.1.1,1.0,0.0,2021-07-09 16:02:50.671000+00:00,2023-06-16 19:26:47.973000+00:00,conda,noarch/napari-bioformats-0.1.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['jpype1', 'napari-plugin-engine >=0.1.4', 'numpy', 'ome-types', 'pims', 'python >=3.7']",noarch,1625846500941.0,None-any-None,pyhd8ed1ab_0,2021-07-09 16:02:51.248000+00:00,0b1fb5e33b2132ae8878b652e71d7867,None,12209.0,conda-forge/napari-bioformats/0.1.1/noarch/napari-bioformats-0.1.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-bioformats/0.1.1/noarch/napari-bioformats-0.1.1-pyhd8ed1ab_0.tar.bz2,conda,0.1.1,conda-forge,['main'],public,,0.2.1,napari-bioformats.napari_get_reader,napari_get_reader,napari_bioformats._core:napari_get_reader,napari-bioformats.napari_get_reader,['*'],True,2.1,napari-bioformats,0.2.1,['UNKNOWN'],"Bioformats for napari, using pims","# napari-bioformats [![License](https://img.shields.io/pypi/l/napari-bioformats.svg?color=green)](https://github.com/napari/napari-bioformats/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-bioformats.svg?color=green)](https://pypi.org/project/napari-bioformats) @@ -10152,8 +10810,8 @@ _This [napari] plugin was generated with [Cookiecutter] using with [@napari]'s [ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/tlambert03/napari-bioformats,Talley Lambert,talley.lambert@gmail.com,GPL-3.0,"['Development Status :: 4 - Beta', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Topic :: Software Development :: Testing']","['jpype1', 'napari-plugin-engine (>=0.1.4)', 'numpy', 'ome-types', 'pims', 'requests', ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.7,"['Bug Tracker, https://github.com/tlambert03/napari-bioformats/issues', 'Documentation, https://github.com/tlambert03/napari-bioformats#README.md', 'Source Code, https://github.com/tlambert03/napari-bioformats', 'User Support, https://github.com/tlambert03/napari-bioformats/issues']",['testing'],True,0.1.2,conda-forge/napari-bioformats/0.1.2,,,,,conda,noarch/napari-bioformats-0.1.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['jpype1', 'napari-plugin-engine >=0.1.4', 'numpy', 'ome-types', 'pims', 'python >=3.7']",pyhd8ed1ab_0,1625954350340.0,None-any-None,noarch,2021-07-10 22:00:11.198000+00:00,66d58e770b4b6541fa822974f56b316c,None,12974.0,conda-forge/napari-bioformats/0.1.2/noarch/napari-bioformats-0.1.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-bioformats/0.1.2/noarch/napari-bioformats-0.1.2-pyhd8ed1ab_0.tar.bz2,conda,0.1.2,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -100,napari-bioimageio,0.1.3,BioImage.IO Model Manager,,,,,62cbe4b30b3c44567d654f75,['conda'],,https://github.com/bioimage-io/napari-bioimageio,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-bioimageio,http://api.anaconda.org/packages/conda-forge/napari-bioimageio,http://anaconda.org/conda-forge/napari-bioimageio,['0.1.3'],0.1.3,0.1.3,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.3,conda-forge/napari-bioimageio/0.1.3,1.0,0.0,2022-07-11 08:52:01.522000+00:00,2023-06-18 08:42:03.335000+00:00,conda,noarch/napari-bioimageio-0.1.3-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['bioimageio.core >=0.5.1', 'napari', 'python >=3.7', 'pyyaml >=6.0']",noarch,1657529405722.0,None-any-None,pyhd8ed1ab_0,2022-07-11 08:52:01.748000+00:00,1e251ff81851704fc0cf3859821551b7,None,29535.0,conda-forge/napari-bioimageio/0.1.3/noarch/napari-bioimageio-0.1.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-bioimageio/0.1.3/noarch/napari-bioimageio-0.1.3-pyhd8ed1ab_0.tar.bz2,conda,0.1.3,conda-forge,['main'],public,,0.2.1,napari-bioimageio.QtBioImageIOModelManager,BioImage.IO Model Manager,napari_bioimageio._bmm:QtBioImageIOModelManager,,,,2.1,napari-bioimageio,0.1.3,,,"# napari-bioimageio +",text/markdown,https://github.com/tlambert03/napari-bioformats,Talley Lambert,talley.lambert@gmail.com,GPL-3.0,"['Development Status :: 4 - Beta', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Topic :: Software Development :: Testing']","['jpype1', 'napari-plugin-engine (>=0.1.4)', 'numpy', 'ome-types', 'pims', 'requests', ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.7,"['Bug Tracker, https://github.com/tlambert03/napari-bioformats/issues', 'Documentation, https://github.com/tlambert03/napari-bioformats#README.md', 'Source Code, https://github.com/tlambert03/napari-bioformats', 'User Support, https://github.com/tlambert03/napari-bioformats/issues']",['testing'],True,0.1.2,conda-forge/napari-bioformats/0.1.2,,,,,conda,noarch/napari-bioformats-0.1.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['jpype1', 'napari-plugin-engine >=0.1.4', 'numpy', 'ome-types', 'pims', 'python >=3.7']",pyhd8ed1ab_0,1625954350340.0,None-any-None,noarch,2021-07-10 22:00:11.198000+00:00,66d58e770b4b6541fa822974f56b316c,None,12974.0,conda-forge/napari-bioformats/0.1.2/noarch/napari-bioformats-0.1.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-bioformats/0.1.2/noarch/napari-bioformats-0.1.2-pyhd8ed1ab_0.tar.bz2,conda,0.1.2,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +107,napari-bioimageio,0.1.3,BioImage.IO Model Manager,,,,,62cbe4b30b3c44567d654f75,['conda'],,https://github.com/bioimage-io/napari-bioimageio,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-bioimageio,http://api.anaconda.org/packages/conda-forge/napari-bioimageio,http://anaconda.org/conda-forge/napari-bioimageio,['0.1.3'],0.1.3,0.1.3,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.3,conda-forge/napari-bioimageio/0.1.3,1.0,0.0,2022-07-11 08:52:01.522000+00:00,2023-06-18 08:42:03.335000+00:00,conda,noarch/napari-bioimageio-0.1.3-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['bioimageio.core >=0.5.1', 'napari', 'python >=3.7', 'pyyaml >=6.0']",noarch,1657529405722.0,None-any-None,pyhd8ed1ab_0,2022-07-11 08:52:01.748000+00:00,1e251ff81851704fc0cf3859821551b7,None,29535.0,conda-forge/napari-bioimageio/0.1.3/noarch/napari-bioimageio-0.1.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-bioimageio/0.1.3/noarch/napari-bioimageio-0.1.3-pyhd8ed1ab_0.tar.bz2,conda,0.1.3,conda-forge,['main'],public,,0.2.1,napari-bioimageio.QtBioImageIOModelManager,BioImage.IO Model Manager,napari_bioimageio._bmm:QtBioImageIOModelManager,,,,2.1,napari-bioimageio,0.1.3,,,"# napari-bioimageio napari plugin for managing AI models in the [BioImage Model Zoo](https://bioimage.io). @@ -10263,8 +10921,8 @@ It will also install this package in development mode, so that code changes are ``` - Continuous integration is by default supported via [GitHub actions](https://help.github.com/en/actions). GitHub actions is free for public repositories and comes with 2000 free Ubuntu build minutes per month for private repositories. -",text/markdown; charset=UTF-8; variant=GFM,,,,,"['Framework :: napari', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.7']","['napari', 'bioimageio.core (>=0.5.1)', 'PyYAML (>=6.0)']",>=3.7,,,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-bioimageio.QtBioImageIOModelManager,BioImage.IO Model Manager,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -101,napari-biomag-annotator,0.0.3,BIOMAG Annotator,An annotator tool collection by the BIOMAG group.,"Reka Hollandi, David Bauer",BSD-3-Clause,https://github.com/biomag-lab/napari-biomag-annotator,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-biomag-annotator.get_reader,Open data with BIOMAG Annotator,napari_biomag_annotator._reader:napari_get_reader,napari-biomag-annotator.get_reader,['*.npy'],False,2.1,napari-biomag-annotator,0.0.3,,An annotator tool collection by the BIOMAG group.,"# napari-biomag-annotator +",text/markdown; charset=UTF-8; variant=GFM,,,,,"['Framework :: napari', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.7']","['napari', 'bioimageio.core (>=0.5.1)', 'PyYAML (>=6.0)']",>=3.7,,,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-bioimageio.QtBioImageIOModelManager,BioImage.IO Model Manager,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +108,napari-biomag-annotator,0.0.3,BIOMAG Annotator,An annotator tool collection by the BIOMAG group.,"Reka Hollandi, David Bauer",BSD-3-Clause,https://github.com/biomag-lab/napari-biomag-annotator,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-biomag-annotator.get_reader,Open data with BIOMAG Annotator,napari_biomag_annotator._reader:napari_get_reader,napari-biomag-annotator.get_reader,['*.npy'],False,2.1,napari-biomag-annotator,0.0.3,,An annotator tool collection by the BIOMAG group.,"# napari-biomag-annotator [![License BSD-3](https://img.shields.io/pypi/l/napari-biomag-annotator.svg?color=green)](https://github.com/biomag-lab/napari-biomag-annotator/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-biomag-annotator.svg?color=green)](https://pypi.org/project/napari-biomag-annotator) @@ -10374,8 +11032,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/biomag-lab/napari-biomag-annotator,"Reka Hollandi, David Bauer",hunreka93@hotmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['napari', 'napari-plugin-engine >=0.1.4', 'napari-annotatorj', 'napari-nD-annotator', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/biomag-lab/napari-biomag-annotator/issues', 'Documentation, https://github.com/biomag-lab/napari-biomag-annotator#README.md', 'Source Code, https://github.com/biomag-lab/napari-biomag-annotator', 'User Support, https://github.com/biomag-lab/napari-biomag-annotator/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",napari-biomag-annotator.write_multiple,Save multi-layer data with BIOMAG Annotator,napari_biomag_annotator._writer:write_multiple,napari-biomag-annotator.write_single_image,Save image data with BIOMAG Annotator,napari_biomag_annotator._writer:write_single_image,napari-biomag-annotator.BIOMAGAnnotator,napari-biomag-annotator,napari_biomag_annotator:BIOMAGAnnotator,napari-biomag-annotator.BIOMAGAnnotator,napari-biomag-annotator,False,,,,,,,,,,,,,napari-biomag-annotator.write_multiple,"['image*', 'labels*']",,napari-biomag-annotator.write_single_image,['image'],['.npy'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -102,napari-bleach-correct,0.0.1,Bleaching Correction,A napari plugin to correct time-lapse images for photobleaching.,Alexander Marx,MIT,https://github.com/marx-alex/napari-bleach-correct,6425ce5cf21024c0d0360e5f,['conda'],,https://github.com/marx-alex/napari-bleach-correct,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-bleach-correct,http://api.anaconda.org/packages/conda-forge/napari-bleach-correct,http://anaconda.org/conda-forge/napari-bleach-correct,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-bleach-correct/0.0.1,1.0,0.0,2023-03-30 18:00:57.880000+00:00,2023-06-18 17:27:56.008000+00:00,conda,noarch/napari-bleach-correct-0.0.1-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['magicgui', 'numpy', 'pyqtgraph', 'python >=3.8', 'qtpy', 'scikit-image', 'scipy']",noarch,1680199187353.0,None-any-None,pyhd8ed1ab_0,2023-03-30 18:00:58.207000+00:00,ce9aaa871b4328ec3c7c9d18316397f9,7b49caadf55037c5fceb997f8c6c1f3f6c99bbd40505e48626d20f9b8f060dac,17526.0,conda-forge/napari-bleach-correct/0.0.1/noarch/napari-bleach-correct-0.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-bleach-correct/0.0.1/noarch/napari-bleach-correct-0.0.1-pyhd8ed1ab_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-bleach-correct.make_sample_data,Load sample data from napari Bleach Correction,napari_bleach_correct._sample_data:make_sample_data,,,,2.1,napari-bleach-correct,0.0.1,,A napari plugin to correct time-lapse images for photobleaching.,"# napari-bleach-correct +",text/markdown,https://github.com/biomag-lab/napari-biomag-annotator,"Reka Hollandi, David Bauer",hunreka93@hotmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['napari', 'napari-plugin-engine >=0.1.4', 'napari-annotatorj', 'napari-nD-annotator', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/biomag-lab/napari-biomag-annotator/issues', 'Documentation, https://github.com/biomag-lab/napari-biomag-annotator#README.md', 'Source Code, https://github.com/biomag-lab/napari-biomag-annotator', 'User Support, https://github.com/biomag-lab/napari-biomag-annotator/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",napari-biomag-annotator.write_multiple,Save multi-layer data with BIOMAG Annotator,napari_biomag_annotator._writer:write_multiple,napari-biomag-annotator.write_single_image,Save image data with BIOMAG Annotator,napari_biomag_annotator._writer:write_single_image,napari-biomag-annotator.BIOMAGAnnotator,napari-biomag-annotator,napari_biomag_annotator:BIOMAGAnnotator,napari-biomag-annotator.BIOMAGAnnotator,napari-biomag-annotator,False,,,,,,,,,,,,,napari-biomag-annotator.write_multiple,"['image*', 'labels*']",,napari-biomag-annotator.write_single_image,['image'],['.npy'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +109,napari-bleach-correct,0.0.1,Bleaching Correction,A napari plugin to correct time-lapse images for photobleaching.,Alexander Marx,MIT,https://github.com/marx-alex/napari-bleach-correct,6425ce5cf21024c0d0360e5f,['conda'],,https://github.com/marx-alex/napari-bleach-correct,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-bleach-correct,http://api.anaconda.org/packages/conda-forge/napari-bleach-correct,http://anaconda.org/conda-forge/napari-bleach-correct,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-bleach-correct/0.0.1,1.0,0.0,2023-03-30 18:00:57.880000+00:00,2023-06-18 17:27:56.008000+00:00,conda,noarch/napari-bleach-correct-0.0.1-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['magicgui', 'numpy', 'pyqtgraph', 'python >=3.8', 'qtpy', 'scikit-image', 'scipy']",noarch,1680199187353.0,None-any-None,pyhd8ed1ab_0,2023-03-30 18:00:58.207000+00:00,ce9aaa871b4328ec3c7c9d18316397f9,7b49caadf55037c5fceb997f8c6c1f3f6c99bbd40505e48626d20f9b8f060dac,17526.0,conda-forge/napari-bleach-correct/0.0.1/noarch/napari-bleach-correct-0.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-bleach-correct/0.0.1/noarch/napari-bleach-correct-0.0.1-pyhd8ed1ab_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-bleach-correct.make_sample_data,Load sample data from napari Bleach Correction,napari_bleach_correct._sample_data:make_sample_data,,,,2.1,napari-bleach-correct,0.0.1,,A napari plugin to correct time-lapse images for photobleaching.,"# napari-bleach-correct [![License](https://img.shields.io/github/license/marx-alex/napari-bleach-correct)](https://github.com/marx-alex/napari-bleach-correct) [![PyPI](https://img.shields.io/pypi/v/napari-bleach-correct.svg?color=green)](https://pypi.org/project/napari-bleach-correct) @@ -10489,8 +11147,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/marx-alex/napari-bleach-correct,Alexander Marx,a.marx95@gmx.de,MIT,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['numpy', 'magicgui', 'qtpy', 'scikit-image', 'scipy', 'pyqtgraph', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/marx-alex/napari-bleach-correct/issues', 'Documentation, https://github.com/marx-alex/napari-bleach-correct#README.md', 'Source Code, https://github.com/marx-alex/napari-bleach-correct', 'User Support, https://github.com/marx-alex/napari-bleach-correct/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-bleach-correct.main_widget,Bleaching Correction,napari_bleach_correct._dock_widget:MainWidget,,,,,,,napari-bleach-correct.main_widget,Bleaching Correction,False,,,,,,,,,,,,,,,,,,,,napari-bleach-correct.make_sample_data,unique_id.1,Bleaching Mito,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -103,napari-blender,1.0.1,Blender Visualization,A plug-in to help visualize and analyze organoid segmentation using Blender,," +",text/markdown,https://github.com/marx-alex/napari-bleach-correct,Alexander Marx,a.marx95@gmx.de,MIT,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['numpy', 'magicgui', 'qtpy', 'scikit-image', 'scipy', 'pyqtgraph', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/marx-alex/napari-bleach-correct/issues', 'Documentation, https://github.com/marx-alex/napari-bleach-correct#README.md', 'Source Code, https://github.com/marx-alex/napari-bleach-correct', 'User Support, https://github.com/marx-alex/napari-bleach-correct/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-bleach-correct.main_widget,Bleaching Correction,napari_bleach_correct._dock_widget:MainWidget,,,,,,,napari-bleach-correct.main_widget,Bleaching Correction,False,,,,,,,,,,,,,,,,,,,,napari-bleach-correct.make_sample_data,unique_id.1,Bleaching Mito,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +110,napari-blender,1.0.1,Blender Visualization,A plug-in to help visualize and analyze organoid segmentation using Blender,," Mozilla Public License Version 2.0",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-blender.get_reader,Open data with Blender Visualization,napari_blender._reader:napari_get_reader,napari-blender.get_reader,['*.npy'],False,2.1,napari-blender,1.0.1,,A plug-in to help visualize and analyze organoid segmentation using Blender,"# napari-blender napari-blender is a plugin for napari that allows you to render 3D scenes using Blender. @@ -10561,8 +11219,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ",text/markdown,,,"""Krijn H. van der Steen"" "," -Mozilla Public License Version 2.0","['Development Status :: 3 - Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Mozilla Public License 2.0 (MPL 2.0)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', 'napari-video', 'tifffile', 'bpy >=4.0.0', 'trimesh', 'opencv-python', 'scipy', 'pathlib', 'mathutils', 'pandas']",>=3.10,"['Bug Tracker, https://github.com/Living-Technologies/napari-blender/issues', 'Documentation, https://living-technologies.github.io/napari-blender/index.html', 'Source Code, https://github.com/Living-Technologies/napari-blender', 'User Support, https://github.com/Living-Technologies/napari-blender/issues']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",napari-blender.write_multiple,Save multi-layer data with Blender Visualization,napari_blender._writer:write_multiple,napari-blender.write_single_image,Save image data with Blender Visualization,napari_blender._writer:write_single_image,napari-blender.make_sample_data,Load sample data from Blender Visualization,napari_blender._sample_data:make_sample_data,napari-blender.make_transparant_widget,Transparent Overlay,False,napari-blender.make_microscopy_widget,Microscopy Overlay,False,napari-blender.make_gradient_widget,Gradient Overlay,False,napari-blender.make_tracked_widget,Tracked Nuclei,False,napari-blender.make_container_widget,Make threshold Container widget,napari_blender:ImageThreshold,napari-blender.write_multiple,"['image*', 'labels*']",,napari-blender.write_single_image,['image'],['.npy'],,napari-blender.make_sample_data,unique_id.1,Blender Visualization,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-blender.make_transparant_widget,Make widget to compare two images,napari_blender:transparant_widget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-blender.make_microscopy_widget,Make widget to compare two images using microscopy input,napari_blender:microscopy_widget,napari-blender.make_gradient_widget,Make widget to compare two images,napari_blender:gradient_widget,napari-blender.make_tracked_widget,Make widget to display single image,napari_blender:tracked_widget,napari-blender.make_timelapse_widget,Make widget to display single image,napari_blender:timelapse_widget,napari-blender.make_video_loader_widget,Make widget to display video,napari_blender:video_loader_widget,,,,,napari-blender.make_timelapse_widget,Timelapse Mode,False,napari-blender.make_video_loader_widget,Video Loader,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -104,napari-blender-bridge,0.2.0,napari-blender-bridge,Transfer surface layers between Napari and Blender,Robert Haase,GNU GPL v3.0,https://github.com/haesleinhuepf/napari-blender-bridge,643da56775607eabfd4faa68,['conda'],,https://github.com/haesleinhuepf/napari-blender-bridge,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-blender-bridge,http://api.anaconda.org/packages/conda-forge/napari-blender-bridge,http://anaconda.org/conda-forge/napari-blender-bridge,['0.2.0'],0.2.0,0.2.0,['noarch'],3.0,,['pyhd8ed1ab_0'],0.2.0,conda-forge/napari-blender-bridge/0.2.0,1.0,0.0,2023-04-17 20:00:37.953000+00:00,2023-06-18 17:28:02.260000+00:00,conda,noarch/napari-blender-bridge-0.2.0-pyhd8ed1ab_0.conda,0.0,GPL-3.0-or-later,False,python,"['napari-plugin-engine >=0.1.4', 'napari-process-points-and-surfaces >=0.4.2', 'napari-tools-menu', 'numpy', 'python >=3.8', 'vedo']",noarch,1681761504819.0,None-any-None,pyhd8ed1ab_0,2023-04-17 20:00:38.221000+00:00,915a01f668d2525f14e81cdaa548fb09,a94527fc494d9f2deafeaedc4094171006dd51d00d42062c7b653a38e6f56622,24400.0,conda-forge/napari-blender-bridge/0.2.0/noarch/napari-blender-bridge-0.2.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-blender-bridge/0.2.0/noarch/napari-blender-bridge-0.2.0-pyhd8ed1ab_0.conda,conda,0.2.0,conda-forge,['main'],public,,0.2.1,,,,,,,2.1,napari-blender-bridge,0.2.0,,Transfer surface layers between Napari and Blender,"# napari-blender-bridge +Mozilla Public License Version 2.0","['Development Status :: 3 - Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Mozilla Public License 2.0 (MPL 2.0)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', 'napari-video', 'tifffile', 'bpy >=4.0.0', 'trimesh', 'opencv-python', 'scipy', 'pathlib', 'mathutils', 'pandas']",>=3.10,"['Bug Tracker, https://github.com/Living-Technologies/napari-blender/issues', 'Documentation, https://living-technologies.github.io/napari-blender/index.html', 'Source Code, https://github.com/Living-Technologies/napari-blender', 'User Support, https://github.com/Living-Technologies/napari-blender/issues']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",napari-blender.write_multiple,Save multi-layer data with Blender Visualization,napari_blender._writer:write_multiple,napari-blender.write_single_image,Save image data with Blender Visualization,napari_blender._writer:write_single_image,napari-blender.make_sample_data,Load sample data from Blender Visualization,napari_blender._sample_data:make_sample_data,napari-blender.make_transparant_widget,Transparent Overlay,False,napari-blender.make_microscopy_widget,Microscopy Overlay,False,napari-blender.make_gradient_widget,Gradient Overlay,False,napari-blender.make_tracked_widget,Tracked Nuclei,False,napari-blender.make_container_widget,Make threshold Container widget,napari_blender:ImageThreshold,napari-blender.write_multiple,"['image*', 'labels*']",,napari-blender.write_single_image,['image'],['.npy'],,napari-blender.make_sample_data,unique_id.1,Blender Visualization,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-blender.make_transparant_widget,Make widget to compare two images,napari_blender:transparant_widget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-blender.make_microscopy_widget,Make widget to compare two images using microscopy input,napari_blender:microscopy_widget,napari-blender.make_gradient_widget,Make widget to compare two images,napari_blender:gradient_widget,napari-blender.make_tracked_widget,Make widget to display single image,napari_blender:tracked_widget,napari-blender.make_timelapse_widget,Make widget to display single image,napari_blender:timelapse_widget,napari-blender.make_video_loader_widget,Make widget to display video,napari_blender:video_loader_widget,,napari-blender.make_timelapse_widget,Timelapse Mode,False,napari-blender.make_video_loader_widget,Video Loader,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +111,napari-blender-bridge,0.2.0,napari-blender-bridge,Transfer surface layers between Napari and Blender,Robert Haase,GNU GPL v3.0,https://github.com/haesleinhuepf/napari-blender-bridge,643da56775607eabfd4faa68,['conda'],,https://github.com/haesleinhuepf/napari-blender-bridge,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-blender-bridge,http://api.anaconda.org/packages/conda-forge/napari-blender-bridge,http://anaconda.org/conda-forge/napari-blender-bridge,['0.2.0'],0.2.0,0.2.0,['noarch'],3.0,,['pyhd8ed1ab_0'],0.2.0,conda-forge/napari-blender-bridge/0.2.0,1.0,0.0,2023-04-17 20:00:37.953000+00:00,2023-06-18 17:28:02.260000+00:00,conda,noarch/napari-blender-bridge-0.2.0-pyhd8ed1ab_0.conda,0.0,GPL-3.0-or-later,False,python,"['napari-plugin-engine >=0.1.4', 'napari-process-points-and-surfaces >=0.4.2', 'napari-tools-menu', 'numpy', 'python >=3.8', 'vedo']",noarch,1681761504819.0,None-any-None,pyhd8ed1ab_0,2023-04-17 20:00:38.221000+00:00,915a01f668d2525f14e81cdaa548fb09,a94527fc494d9f2deafeaedc4094171006dd51d00d42062c7b653a38e6f56622,24400.0,conda-forge/napari-blender-bridge/0.2.0/noarch/napari-blender-bridge-0.2.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-blender-bridge/0.2.0/noarch/napari-blender-bridge-0.2.0-pyhd8ed1ab_0.conda,conda,0.2.0,conda-forge,['main'],public,,0.2.1,,,,,,,2.1,napari-blender-bridge,0.2.0,,Transfer surface layers between Napari and Blender,"# napari-blender-bridge @@ -10704,8 +11362,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/haesleinhuepf/napari-blender-bridge,Robert Haase,robert.haase@tu-dresden.de,GNU GPL v3.0,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari-tools-menu', 'napari-process-points-and-surfaces (>=0.4.2)', 'vedo']",>=3.8,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -105,napari-blob-detection,0.0.2,napari blob detection,Detects blobs in images,"Andy Sweet, Chi-Li Chiu",BSD-3-Clause,https://github.com/andy-sweet/napari-blob-detection,62a72198eb48862cf4159b70,['conda'],,https://github.com/andy-sweet/napari-blob-detection,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-blob-detection,http://api.anaconda.org/packages/conda-forge/napari-blob-detection,http://anaconda.org/conda-forge/napari-blob-detection,['0.0.2'],0.0.2,0.0.2,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.2,conda-forge/napari-blob-detection/0.0.2,1.0,0.0,2022-06-13 11:37:57.701000+00:00,2023-06-18 08:41:46.383000+00:00,conda,noarch/napari-blob-detection-0.0.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari >=0.4.13', 'numpy', 'python >=3.8', 'scikit-image']",noarch,1655120109907.0,None-any-None,pyhd8ed1ab_0,2022-06-13 11:37:58.269000+00:00,ba96b9adaaf966ce263aa63b073a390c,None,12237.0,conda-forge/napari-blob-detection/0.0.2/noarch/napari-blob-detection-0.0.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-blob-detection/0.0.2/noarch/napari-blob-detection-0.0.2-pyhd8ed1ab_0.tar.bz2,conda,0.0.2,conda-forge,['main'],public,,0.2.1,napari-blob-detection.detect_blobs_widget,Detects blobs on images,napari_blob_detection:detect_blobs_widget,,,,2.1,napari-blob-detection,0.0.2,['UNKNOWN'],Detects blobs in images,"# napari-blob-detection +",text/markdown,https://github.com/haesleinhuepf/napari-blender-bridge,Robert Haase,robert.haase@tu-dresden.de,GNU GPL v3.0,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari-tools-menu', 'napari-process-points-and-surfaces (>=0.4.2)', 'vedo']",>=3.8,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +112,napari-blob-detection,0.0.2,napari blob detection,Detects blobs in images,"Andy Sweet, Chi-Li Chiu",BSD-3-Clause,https://github.com/andy-sweet/napari-blob-detection,62a72198eb48862cf4159b70,['conda'],,https://github.com/andy-sweet/napari-blob-detection,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-blob-detection,http://api.anaconda.org/packages/conda-forge/napari-blob-detection,http://anaconda.org/conda-forge/napari-blob-detection,['0.0.2'],0.0.2,0.0.2,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.2,conda-forge/napari-blob-detection/0.0.2,1.0,0.0,2022-06-13 11:37:57.701000+00:00,2023-06-18 08:41:46.383000+00:00,conda,noarch/napari-blob-detection-0.0.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari >=0.4.13', 'numpy', 'python >=3.8', 'scikit-image']",noarch,1655120109907.0,None-any-None,pyhd8ed1ab_0,2022-06-13 11:37:58.269000+00:00,ba96b9adaaf966ce263aa63b073a390c,None,12237.0,conda-forge/napari-blob-detection/0.0.2/noarch/napari-blob-detection-0.0.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-blob-detection/0.0.2/noarch/napari-blob-detection-0.0.2-pyhd8ed1ab_0.tar.bz2,conda,0.0.2,conda-forge,['main'],public,,0.2.1,napari-blob-detection.detect_blobs_widget,Detects blobs on images,napari_blob_detection:detect_blobs_widget,,,,2.1,napari-blob-detection,0.0.2,['UNKNOWN'],Detects blobs in images,"# napari-blob-detection [![License](https://img.shields.io/pypi/l/napari-blob-detection.svg?color=green)](https://github.com/andy-sweet/napari-blob-detection/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-blob-detection.svg?color=green)](https://pypi.org/project/napari-blob-detection) @@ -10807,8 +11465,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/andy-sweet/napari-blob-detection,"Andy Sweet, Chi-Li Chiu","andrewdsweet@gmail.com, cchiu@chanzuckerberg.com",BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari (>=0.4.13)', 'numpy', 'scikit-image', 'magicgui', ""pytest ; extra == 'test'""]",>=3.8,"['Bug Tracker, https://github.com/andy-sweet/napari-blob-detection/issues', 'Documentation, https://github.com/andy-sweet/napari-blob-detection#README.md', 'Source Code, https://github.com/andy-sweet/napari-blob-detection', 'User Support, https://github.com/andy-sweet/napari-blob-detection/issues']",['test'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-blob-detection.points_to_labels,Convert points layer to labels layer,napari_blob_detection:points_to_labels,,,,,,,napari-blob-detection.detect_blobs_widget,Detects blobs on images,False,napari-blob-detection.points_to_labels,Convert points layer to labels layer,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -106,napari-blosc2,0.0.2,Blosc2 Reader & Writer,An image reader & writer for blosc2 images.,Karol Gotkowski," +",text/markdown,https://github.com/andy-sweet/napari-blob-detection,"Andy Sweet, Chi-Li Chiu","andrewdsweet@gmail.com, cchiu@chanzuckerberg.com",BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari (>=0.4.13)', 'numpy', 'scikit-image', 'magicgui', ""pytest ; extra == 'test'""]",>=3.8,"['Bug Tracker, https://github.com/andy-sweet/napari-blob-detection/issues', 'Documentation, https://github.com/andy-sweet/napari-blob-detection#README.md', 'Source Code, https://github.com/andy-sweet/napari-blob-detection', 'User Support, https://github.com/andy-sweet/napari-blob-detection/issues']",['test'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-blob-detection.points_to_labels,Convert points layer to labels layer,napari_blob_detection:points_to_labels,,,,,,,napari-blob-detection.detect_blobs_widget,Detects blobs on images,False,napari-blob-detection.points_to_labels,Convert points layer to labels layer,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +113,napari-blosc2,0.0.2,Blosc2 Reader & Writer,An image reader & writer for blosc2 images.,Karol Gotkowski," Apache License Version 2.0, January 2004 http://www.apache.org/licenses/ @@ -11271,8 +11929,8 @@ distributed under the License is distributed on an ""AS IS"" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. -","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['blosc2', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.9,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",napari-blosc2.write_multiple,Save multi-layer data with Blosc2 Reader & Writer,napari_blosc2._writer:write_multiple,napari-blosc2.write_single_image,Save image data with Blosc2 Reader & Writer,napari_blosc2._writer:write_single_image,,,,,,,,,,,,,,,,,,,napari-blosc2.write_multiple,"['image*', 'labels*']",,napari-blosc2.write_single_image,['image'],['.b2nd'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -107,napari-blossom,0.1.6,Blossom,Segmentation of blossom apple tree images,Herearii Metuarea,BSD-3-Clause,https://github.com/hereariim/napari-blossom,62c69f18eb48862cf45ae710,['conda'],,https://github.com/hereariim/napari-blossom,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-blossom,http://api.anaconda.org/packages/conda-forge/napari-blossom,http://anaconda.org/conda-forge/napari-blossom,"['0.0.1', '0.0.3', '0.0.4', '0.1.3', '0.1.4', '0.1.5']",0.1.5,0.1.5,['noarch'],13.0,https://github.com/hereariim/napari-blossom,"['pyh9208f05_0', 'pyhd8ed1ab_0']",0.0.1,conda-forge/napari-blossom/0.0.1,1.0,0.0,2022-07-07 08:53:40.627000+00:00,2023-11-07 20:12:40.436000+00:00,conda,noarch/napari-blossom-0.0.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'opencv', 'python >=3.8', 'qtpy', 'scikit-image', 'tensorflow']",noarch,1657183795588.0,None-any-None,pyhd8ed1ab_0,2022-07-07 08:53:41.123000+00:00,4738731abe809f0add9f26a5997c5470,None,19357649.0,conda-forge/napari-blossom/0.0.1/noarch/napari-blossom-0.0.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-blossom/0.0.1/noarch/napari-blossom-0.0.1-pyhd8ed1ab_0.tar.bz2,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-blossom.get_reader,Open data with Blossom,napari_blossom._reader:napari_get_reader,napari-blossom.get_reader,['*.npy'],False,2.1,napari-blossom,0.1.6,,Segmentation of blossom apple tree images,"# napari-blossom +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['blosc2', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.9,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",napari-blosc2.write_multiple,Save multi-layer data with Blosc2 Reader & Writer,napari_blosc2._writer:write_multiple,napari-blosc2.write_single_image,Save image data with Blosc2 Reader & Writer,napari_blosc2._writer:write_single_image,,,,,,,,,,,,,,,,,,,napari-blosc2.write_multiple,"['image*', 'labels*']",,napari-blosc2.write_single_image,['image'],['.b2nd'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +114,napari-blossom,0.1.6,Blossom,Segmentation of blossom apple tree images,Herearii Metuarea,BSD-3-Clause,https://github.com/hereariim/napari-blossom,62c69f18eb48862cf45ae710,['conda'],,https://github.com/hereariim/napari-blossom,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-blossom,http://api.anaconda.org/packages/conda-forge/napari-blossom,http://anaconda.org/conda-forge/napari-blossom,"['0.0.1', '0.0.3', '0.0.4', '0.1.3', '0.1.4', '0.1.5']",0.1.5,0.1.5,['noarch'],13.0,https://github.com/hereariim/napari-blossom,"['pyh9208f05_0', 'pyhd8ed1ab_0']",0.0.1,conda-forge/napari-blossom/0.0.1,1.0,0.0,2022-07-07 08:53:40.627000+00:00,2023-11-07 20:12:40.436000+00:00,conda,noarch/napari-blossom-0.0.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'opencv', 'python >=3.8', 'qtpy', 'scikit-image', 'tensorflow']",noarch,1657183795588.0,None-any-None,pyhd8ed1ab_0,2022-07-07 08:53:41.123000+00:00,4738731abe809f0add9f26a5997c5470,None,19357649.0,conda-forge/napari-blossom/0.0.1/noarch/napari-blossom-0.0.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-blossom/0.0.1/noarch/napari-blossom-0.0.1-pyhd8ed1ab_0.tar.bz2,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-blossom.get_reader,Open data with Blossom,napari_blossom._reader:napari_get_reader,napari-blossom.get_reader,['*.npy'],False,2.1,napari-blossom,0.1.6,,Segmentation of blossom apple tree images,"# napari-blossom [![License BSD-3](https://img.shields.io/pypi/l/napari-blossom.svg?color=green)](https://github.com/hereariim/napari-blossom/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-blossom.svg?color=green)](https://pypi.org/project/napari-blossom) @@ -11346,8 +12004,120 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/hereariim/napari-blossom,Herearii Metuarea,herearii.metuarea@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['numpy >=1.23.0', 'magicgui >=0.6.1', 'qtpy', 'opencv-python-headless >=4.7.0.68', 'tensorflow >=2.11.0', 'scikit-image >=0.19.3', 'napari', 'focal-loss >=0.0.7', 'pillow >=9.3.0', 'tqdm >=4.64.1', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/hereariim/napari-blossom/issues', 'Documentation, https://github.com/hereariim/napari-blossom#README.md', 'Source Code, https://github.com/hereariim/napari-blossom', 'User Support, https://github.com/hereariim/napari-blossom/issues']",['testing'],False,0.0.3,conda-forge/napari-blossom/0.0.3,0.0.4,conda-forge/napari-blossom/0.0.4,0.1.3,conda-forge/napari-blossom/0.1.3,conda,noarch/napari-blossom-0.0.3-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['focal-loss', 'magicgui', 'napari', 'numpy', 'opencv', 'python >=3.8', 'qtpy', 'scikit-image', 'tensorflow']",pyhd8ed1ab_0,1670886123402.0,None-any-None,noarch,2022-12-12 23:05:10.951000+00:00,f1c20a62454ba125df2e01a8b7d5c494,245aac8e0318293e11cb62b0119920f7f9aa06f2e46765eb2a70a6ff2bce8906,17504123.0,conda-forge/napari-blossom/0.0.3/noarch/napari-blossom-0.0.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-blossom/0.0.3/noarch/napari-blossom-0.0.3-pyhd8ed1ab_0.conda,conda,0.0.3,conda-forge,['main'],conda,noarch/napari-blossom-0.0.4-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['focal-loss', 'magicgui', 'napari', 'numpy', 'opencv', 'python >=3.8', 'qtpy', 'scikit-image', 'tensorflow']",noarch,1685642653743.0,None-any-None,pyhd8ed1ab_0,2023-06-01 18:07:14.709000+00:00,2adb60e71d1cf2a17a21a2137dbfad88,944153134c7279af6c4a5ba57dd7a0ddc9e40851f112aa6029ebccc62704c6a1,17501919.0,conda-forge/napari-blossom/0.0.4/noarch/napari-blossom-0.0.4-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-blossom/0.0.4/noarch/napari-blossom-0.0.4-pyhd8ed1ab_0.conda,conda,0.0.4,conda-forge,['main'],conda,noarch/napari-blossom-0.1.3-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['focal-loss', 'magicgui', 'napari', 'numpy', 'opencv', 'python >=3.8', 'qtpy', 'scikit-image', 'tensorflow']",BSD-3-Clause,python,1698085288156.0,2023-10-23 18:24:33.116000+00:00,c823b43ea752133f539e0d9503c9bd3b,80e81589582b24b3404e797e191b7931419926e22e6569def17cf0f0bd7b95b4,17505521.0,conda-forge/napari-blossom/0.1.3/noarch/napari-blossom-0.1.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-blossom/0.1.3/noarch/napari-blossom-0.1.3-pyhd8ed1ab_0.conda,conda,0.1.3,conda-forge,['main'],,napari-blossom.write_multiple,Save multi-layer data with Blossom,napari_blossom._writer:write_multiple,napari-blossom.write_single_image,Save image data with Blossom,napari_blossom._writer:write_single_image,napari-blossom.make_sample_data,Load sample data from Blossom,napari_blossom._sample_data:make_sample_data,napari-blossom.model_segmentation,Segmentation,False,napari-blossom.save_as_zip,Save zip,False,,,,,,,napari-blossom.model_segmentation,Model segmentation,napari_blossom._widget:do_model_segmentation,napari-blossom.write_multiple,"['image*', 'labels*']",,napari-blossom.write_single_image,['image'],['.npy'],,napari-blossom.make_sample_data,unique_id.1,Blossom,0.1.4,conda-forge/napari-blossom/0.1.4,0.1.5,conda-forge/napari-blossom/0.1.5,,,conda,noarch/napari-blossom-0.1.4-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['focal-loss >=0.0.7', 'magicgui >=0.6.1', 'napari', 'numpy >=1.23.0', 'opencv >=4.7.0.68', 'python >=3.8', 'qtpy', 'scikit-image >=0.19.3', 'tensorflow >=2.11.0', 'tqdm >=4.64.1']",noarch,1699385325056.0,None-any-None,pyhd8ed1ab_0,2023-11-07 19:32:21.730000+00:00,18f0159d9f0926555e2f84547d31da53,51cac3c3895b0247bf5ffb9f7074003f0e8db03d4a102dc238c840bedd9643bd,15140594.0,conda-forge/napari-blossom/0.1.4/noarch/napari-blossom-0.1.4-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-blossom/0.1.4/noarch/napari-blossom-0.1.4-pyhd8ed1ab_0.conda,conda,0.1.4,conda-forge,['main'],conda,noarch/napari-blossom-0.1.5-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['focal-loss >=0.0.7', 'magicgui >=0.6.1', 'napari', 'numpy >=1.23.0', 'opencv >=4.7.0.68', 'pillow >=9.3.0', 'python >=3.8', 'qtpy', 'scikit-image >=0.19.3', 'tensorflow >=2.11.0', 'tqdm >=4.64.1']",noarch,1699387755022.0,None-any-None,pyh9208f05_0,2023-11-07 20:12:38.546000+00:00,f70532c1c81e7160d76a65679962cc47,00732ae26a5a8e07f211c3287708f6e7712f7986857011d1c6d8ceb4a17c04c5,15143555.0,conda-forge/napari-blossom/0.1.5/noarch/napari-blossom-0.1.5-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-blossom/0.1.5/noarch/napari-blossom-0.1.5-pyh9208f05_0.conda,conda,0.1.5,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,napari-blossom.save_as_zip,Save zip,napari_blossom._widget:save_as_zip,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -108,napari-boardgame-maker,0.0.2,FooBar Segmentation,Make boardgame tiles,Johannes Soltwedel,BSD-3-Clause,,653c209cbad71c84849d5707,['conda'],"This plugin turns 2D grayscale images into 3D-printable landscape tiles +",text/markdown,https://github.com/hereariim/napari-blossom,Herearii Metuarea,herearii.metuarea@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['numpy >=1.23.0', 'magicgui >=0.6.1', 'qtpy', 'opencv-python-headless >=4.7.0.68', 'tensorflow >=2.11.0', 'scikit-image >=0.19.3', 'napari', 'focal-loss >=0.0.7', 'pillow >=9.3.0', 'tqdm >=4.64.1', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/hereariim/napari-blossom/issues', 'Documentation, https://github.com/hereariim/napari-blossom#README.md', 'Source Code, https://github.com/hereariim/napari-blossom', 'User Support, https://github.com/hereariim/napari-blossom/issues']",['testing'],False,0.0.3,conda-forge/napari-blossom/0.0.3,0.0.4,conda-forge/napari-blossom/0.0.4,0.1.3,conda-forge/napari-blossom/0.1.3,conda,noarch/napari-blossom-0.0.3-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['focal-loss', 'magicgui', 'napari', 'numpy', 'opencv', 'python >=3.8', 'qtpy', 'scikit-image', 'tensorflow']",pyhd8ed1ab_0,1670886123402.0,None-any-None,noarch,2022-12-12 23:05:10.951000+00:00,f1c20a62454ba125df2e01a8b7d5c494,245aac8e0318293e11cb62b0119920f7f9aa06f2e46765eb2a70a6ff2bce8906,17504123.0,conda-forge/napari-blossom/0.0.3/noarch/napari-blossom-0.0.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-blossom/0.0.3/noarch/napari-blossom-0.0.3-pyhd8ed1ab_0.conda,conda,0.0.3,conda-forge,['main'],conda,noarch/napari-blossom-0.0.4-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['focal-loss', 'magicgui', 'napari', 'numpy', 'opencv', 'python >=3.8', 'qtpy', 'scikit-image', 'tensorflow']",noarch,1685642653743.0,None-any-None,pyhd8ed1ab_0,2023-06-01 18:07:14.709000+00:00,2adb60e71d1cf2a17a21a2137dbfad88,944153134c7279af6c4a5ba57dd7a0ddc9e40851f112aa6029ebccc62704c6a1,17501919.0,conda-forge/napari-blossom/0.0.4/noarch/napari-blossom-0.0.4-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-blossom/0.0.4/noarch/napari-blossom-0.0.4-pyhd8ed1ab_0.conda,conda,0.0.4,conda-forge,['main'],conda,noarch/napari-blossom-0.1.3-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['focal-loss', 'magicgui', 'napari', 'numpy', 'opencv', 'python >=3.8', 'qtpy', 'scikit-image', 'tensorflow']",BSD-3-Clause,python,1698085288156.0,2023-10-23 18:24:33.116000+00:00,c823b43ea752133f539e0d9503c9bd3b,80e81589582b24b3404e797e191b7931419926e22e6569def17cf0f0bd7b95b4,17505521.0,conda-forge/napari-blossom/0.1.3/noarch/napari-blossom-0.1.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-blossom/0.1.3/noarch/napari-blossom-0.1.3-pyhd8ed1ab_0.conda,conda,0.1.3,conda-forge,['main'],,napari-blossom.write_multiple,Save multi-layer data with Blossom,napari_blossom._writer:write_multiple,napari-blossom.write_single_image,Save image data with Blossom,napari_blossom._writer:write_single_image,napari-blossom.make_sample_data,Load sample data from Blossom,napari_blossom._sample_data:make_sample_data,napari-blossom.model_segmentation,Segmentation,False,napari-blossom.save_as_zip,Save zip,False,,,,,,,napari-blossom.model_segmentation,Model segmentation,napari_blossom._widget:do_model_segmentation,napari-blossom.write_multiple,"['image*', 'labels*']",,napari-blossom.write_single_image,['image'],['.npy'],,napari-blossom.make_sample_data,unique_id.1,Blossom,0.1.4,conda-forge/napari-blossom/0.1.4,0.1.5,conda-forge/napari-blossom/0.1.5,,,conda,noarch/napari-blossom-0.1.4-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['focal-loss >=0.0.7', 'magicgui >=0.6.1', 'napari', 'numpy >=1.23.0', 'opencv >=4.7.0.68', 'python >=3.8', 'qtpy', 'scikit-image >=0.19.3', 'tensorflow >=2.11.0', 'tqdm >=4.64.1']",noarch,1699385325056.0,None-any-None,pyhd8ed1ab_0,2023-11-07 19:32:21.730000+00:00,18f0159d9f0926555e2f84547d31da53,51cac3c3895b0247bf5ffb9f7074003f0e8db03d4a102dc238c840bedd9643bd,15140594.0,conda-forge/napari-blossom/0.1.4/noarch/napari-blossom-0.1.4-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-blossom/0.1.4/noarch/napari-blossom-0.1.4-pyhd8ed1ab_0.conda,conda,0.1.4,conda-forge,['main'],conda,noarch/napari-blossom-0.1.5-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['focal-loss >=0.0.7', 'magicgui >=0.6.1', 'napari', 'numpy >=1.23.0', 'opencv >=4.7.0.68', 'pillow >=9.3.0', 'python >=3.8', 'qtpy', 'scikit-image >=0.19.3', 'tensorflow >=2.11.0', 'tqdm >=4.64.1']",noarch,1699387755022.0,None-any-None,pyh9208f05_0,2023-11-07 20:12:38.546000+00:00,f70532c1c81e7160d76a65679962cc47,00732ae26a5a8e07f211c3287708f6e7712f7986857011d1c6d8ceb4a17c04c5,15143555.0,conda-forge/napari-blossom/0.1.5/noarch/napari-blossom-0.1.5-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-blossom/0.1.5/noarch/napari-blossom-0.1.5-pyh9208f05_0.conda,conda,0.1.5,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,napari-blossom.save_as_zip,Save zip,napari_blossom._widget:save_as_zip,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +115,napari-bluesky,0.0.2,Bluesky,A plugin for posting to Bluesky from napari,Kyle Harrington," +The MIT License (MIT) + +Copyright (c) 2024 Kyle Harrington + +Permission is hereby granted, free of charge, to any person obtaining a copy +of this software and associated documentation files (the ""Software""), to deal +in the Software without restriction, including without limitation the rights +to use, copy, modify, merge, publish, distribute, sublicense, and/or sell +copies of the Software, and to permit persons to whom the Software is +furnished to do so, subject to the following conditions: + +The above copyright notice and this permission notice shall be included in +all copies or substantial portions of the Software. + +THE SOFTWARE IS PROVIDED ""AS IS"", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR +IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, +FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE +AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER +LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, +OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN +THE SOFTWARE. +",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-bluesky.make_qwidget,Bluesky post,napari_bluesky:BlueskyWidget,,,,2.1,napari-bluesky,0.0.2,,A plugin for posting to Bluesky from napari,"# napari-bluesky + +[![License MIT](https://img.shields.io/pypi/l/napari-bluesky.svg?color=green)](https://github.com/kephale/napari-bluesky/raw/main/LICENSE) +[![PyPI](https://img.shields.io/pypi/v/napari-bluesky.svg?color=green)](https://pypi.org/project/napari-bluesky) +[![Python Version](https://img.shields.io/pypi/pyversions/napari-bluesky.svg?color=green)](https://python.org) +[![tests](https://github.com/kephale/napari-bluesky/workflows/tests/badge.svg)](https://github.com/kephale/napari-bluesky/actions) +[![codecov](https://codecov.io/gh/kephale/napari-bluesky/branch/main/graph/badge.svg)](https://codecov.io/gh/kephale/napari-bluesky) +[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-bluesky)](https://napari-hub.org/plugins/napari-bluesky) + +A plugin for posting to Bluesky from napari + +---------------------------------- + +This [napari] plugin was generated with [copier] using the [napari-plugin-template]. + + + +## Installation + +You can install `napari-bluesky` via [pip]: + + pip install napari-bluesky + + + +To install latest development version : + + pip install git+https://github.com/kephale/napari-bluesky.git + + +## Contributing + +Contributions are very welcome. Tests can be run with [tox], please ensure +the coverage at least stays the same before you submit a pull request. + +## License + +Distributed under the terms of the [MIT] license, +""napari-bluesky"" is free and open source software + +## Issues + +If you encounter any problems, please [file an issue] along with a detailed description. + +[napari]: https://github.com/napari/napari +[copier]: https://copier.readthedocs.io/en/stable/ +[@napari]: https://github.com/napari +[MIT]: http://opensource.org/licenses/MIT +[BSD-3]: http://opensource.org/licenses/BSD-3-Clause +[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt +[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt +[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0 +[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt +[napari-plugin-template]: https://github.com/napari/napari-plugin-template + +[file an issue]: https://github.com/kephale/napari-bluesky/issues + +[napari]: https://github.com/napari/napari +[tox]: https://tox.readthedocs.io/en/latest/ +[pip]: https://pypi.org/project/pip/ +[PyPI]: https://pypi.org/ +",text/markdown,,Kyle Harrington,bluesky@kyleharrington.com," +The MIT License (MIT) + +Copyright (c) 2024 Kyle Harrington + +Permission is hereby granted, free of charge, to any person obtaining a copy +of this software and associated documentation files (the ""Software""), to deal +in the Software without restriction, including without limitation the rights +to use, copy, modify, merge, publish, distribute, sublicense, and/or sell +copies of the Software, and to permit persons to whom the Software is +furnished to do so, subject to the following conditions: + +The above copyright notice and this permission notice shall be included in +all copies or substantial portions of the Software. + +THE SOFTWARE IS PROVIDED ""AS IS"", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR +IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, +FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE +AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER +LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, +OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN +THE SOFTWARE. +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', 'atproto', 'appdirs', 'python-dotenv', 'pillow', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.9,"['Bug Tracker, https://github.com/kephale/napari-bluesky/issues', 'Documentation, https://github.com/kephale/napari-bluesky#README.md', 'Source Code, https://github.com/kephale/napari-bluesky', 'User Support, https://github.com/kephale/napari-bluesky/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",,,,,,,,,,napari-bluesky.make_qwidget,Bluesky post,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +116,napari-boardgame-maker,0.0.2,FooBar Segmentation,Make boardgame tiles,Johannes Soltwedel,BSD-3-Clause,,653c209cbad71c84849d5707,['conda'],"This plugin turns 2D grayscale images into 3D-printable landscape tiles for a certain all-time tabletop boardgame which revolves around building settlements, obtaining ressources expanding and collecting more points than your opponents. @@ -11461,8 +12231,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,,Johannes Soltwedel,johannes_richard.soltwedel@tu-dresden.de,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'napari-stl-exporter', 'vedo', 'napari-tools-menu', 'imagecodecs', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-boardgame-maker.boardgame_maker,Boardgame Tile Maker,napari_boardgame_maker._widget:BoardgameMakerWidget,napari-boardgame-maker.rhone_glacier,Create rhone glacier sample data,napari_boardgame_maker._sample_data:rhone_glacier,,,,napari-boardgame-maker.boardgame_maker,Boardgame Tile Maker,False,,,,,,,,,,,,,napari-boardgame-maker.write_single_image,['image'],,,,,,napari-boardgame-maker.rhone_glacier,Rhone glacier digital elevation model,Rhone glacier (DEM),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['.npy'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -109,napari-boids,0.0.1,Boids,A plugin to look at boids,Léo Guignard,BSD-3-Clause,https://github.com/leoguignard/napari-boids,6435d424263f8dd34611337f,['conda'],,https://github.com/leoguignard/napari-boids,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-boids,http://api.anaconda.org/packages/conda-forge/napari-boids,http://anaconda.org/conda-forge/napari-boids,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-boids/0.0.1,1.0,0.0,2023-04-11 21:41:54.837000+00:00,2023-06-18 17:27:59.648000+00:00,conda,noarch/napari-boids-0.0.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['napari', 'numpy', 'python >=3.8,<3.11', 'scipy']",noarch,1681249191326.0,None-any-None,pyhd8ed1ab_0,2023-04-11 21:41:55.178000+00:00,a3de89e016c46b1cdb8d8704f96b0cc3,2c5dfa9e287fdd10cb2e54ddad47d71f13630befc2c401e43c9d18a30f085d39,13607.0,conda-forge/napari-boids/0.0.1/noarch/napari-boids-0.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-boids/0.0.1/noarch/napari-boids-0.0.1-pyhd8ed1ab_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-boids.boid_viewer,View Boids,napari_boids._widget:BoidViewer,,,,2.1,napari-boids,0.0.1,,A plugin to look at boids,"# napari-boids +",text/markdown,,Johannes Soltwedel,johannes_richard.soltwedel@tu-dresden.de,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'napari-stl-exporter', 'vedo', 'napari-tools-menu', 'imagecodecs', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-boardgame-maker.boardgame_maker,Boardgame Tile Maker,napari_boardgame_maker._widget:BoardgameMakerWidget,napari-boardgame-maker.rhone_glacier,Create rhone glacier sample data,napari_boardgame_maker._sample_data:rhone_glacier,,,,napari-boardgame-maker.boardgame_maker,Boardgame Tile Maker,False,,,,,,,,,,,,,napari-boardgame-maker.write_single_image,['image'],,,,,,napari-boardgame-maker.rhone_glacier,Rhone glacier digital elevation model,Rhone glacier (DEM),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['.npy'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +117,napari-boids,0.0.1,Boids,A plugin to look at boids,Léo Guignard,BSD-3-Clause,https://github.com/leoguignard/napari-boids,6435d424263f8dd34611337f,['conda'],,https://github.com/leoguignard/napari-boids,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-boids,http://api.anaconda.org/packages/conda-forge/napari-boids,http://anaconda.org/conda-forge/napari-boids,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-boids/0.0.1,1.0,0.0,2023-04-11 21:41:54.837000+00:00,2023-06-18 17:27:59.648000+00:00,conda,noarch/napari-boids-0.0.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['napari', 'numpy', 'python >=3.8,<3.11', 'scipy']",noarch,1681249191326.0,None-any-None,pyhd8ed1ab_0,2023-04-11 21:41:55.178000+00:00,a3de89e016c46b1cdb8d8704f96b0cc3,2c5dfa9e287fdd10cb2e54ddad47d71f13630befc2c401e43c9d18a30f085d39,13607.0,conda-forge/napari-boids/0.0.1/noarch/napari-boids-0.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-boids/0.0.1/noarch/napari-boids-0.0.1-pyhd8ed1ab_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-boids.boid_viewer,View Boids,napari_boids._widget:BoidViewer,,,,2.1,napari-boids,0.0.1,,A plugin to look at boids,"# napari-boids [![License BSD-3](https://img.shields.io/pypi/l/napari-boids.svg?color=green)](https://github.com/leoguignard/napari-boids/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-boids.svg?color=green)](https://pypi.org/project/napari-boids) @@ -11529,8 +12299,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/leoguignard/napari-boids,Léo Guignard,leo.guignard@univ-amu.fr,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'scipy', 'magicgui', 'qtpy', 'napari', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.8,"['Bug Tracker, https://github.com/leoguignard/napari-boids/issues', 'Documentation, https://github.com/leoguignard/napari-boids#README.md', 'Source Code, https://github.com/leoguignard/napari-boids', 'User Support, https://github.com/leoguignard/napari-boids/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-boids.boid_viewer,View Boids,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -110,napari-boxmanager,0.4.12,Box Manager,Particle selection tool for cryo-em,Markus Stabrin,MPL-2.0,https://github.com/MPI-Dortmund/napari-boxmanager,6435f0b83f7afa213bfb46e0,['conda'],,https://github.com/MPI-Dortmund/napari-boxmanager,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-boxmanager,http://api.anaconda.org/packages/conda-forge/napari-boxmanager,http://anaconda.org/conda-forge/napari-boxmanager,"['0.2.9', '0.3.11', '0.3.12', '0.3.13', '0.3.14', '0.3.16', '0.4.1', '0.4.3', '0.4.4', '0.4.5', '0.4.6', '0.4.7', '0.4.8']",0.4.8,0.4.8,['noarch'],27.0,https://github.com/MPI-Dortmund/napari-boxmanager,"['pyh9208f05_0', 'pyhd8ed1ab_0']",0.2.9,conda-forge/napari-boxmanager/0.2.9,1.0,0.0,2023-04-11 23:43:50.353000+00:00,2023-12-09 00:57:52.283000+00:00,conda,noarch/napari-boxmanager-0.2.9-pyhd8ed1ab_0.conda,0.0,MPL-2.0,False,python,"['matplotlib-base', 'mrcfile', 'napari', 'numpy', 'pandas', 'pystardb', 'python >=3.10,<3.11']",noarch,1681256490435.0,None-any-None,pyhd8ed1ab_0,2023-04-11 23:43:50.796000+00:00,3b03e2e35c236ecb7f5954be5a40fed6,4c5890425cceeb7b3b85f26469748dec4c87692227934d776016699fe611fd1f,50549.0,conda-forge/napari-boxmanager/0.2.9/noarch/napari-boxmanager-0.2.9-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-boxmanager/0.2.9/noarch/napari-boxmanager-0.2.9-pyhd8ed1ab_0.conda,conda,0.2.9,conda-forge,['main'],public,,0.2.1,napari-boxmanager.get_reader,Open data with Box Manager,box_manager._reader:napari_get_reader,napari-boxmanager.get_reader,"['*.tloc', '*.temb', '*.tmap', '*.cbox', '*.box', '*.star', '*.mrc', '*.mrcs', '*.st', '*.coords', '*.rec', '*.cs', '*.tif', '*.tiff', '*.mrci']",True,2.1,napari-boxmanager,0.4.12,,Particle selection tool for cryo-em,"# napari-boxmanager +",text/markdown,https://github.com/leoguignard/napari-boids,Léo Guignard,leo.guignard@univ-amu.fr,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'scipy', 'magicgui', 'qtpy', 'napari', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.8,"['Bug Tracker, https://github.com/leoguignard/napari-boids/issues', 'Documentation, https://github.com/leoguignard/napari-boids#README.md', 'Source Code, https://github.com/leoguignard/napari-boids', 'User Support, https://github.com/leoguignard/napari-boids/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-boids.boid_viewer,View Boids,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +118,napari-boxmanager,0.4.14,Box Manager,Particle selection tool for cryo-em,Markus Stabrin,MPL-2.0,https://github.com/MPI-Dortmund/napari-boxmanager,6435f0b83f7afa213bfb46e0,['conda'],,https://github.com/MPI-Dortmund/napari-boxmanager,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-boxmanager,http://api.anaconda.org/packages/conda-forge/napari-boxmanager,http://anaconda.org/conda-forge/napari-boxmanager,"['0.2.9', '0.3.11', '0.3.12', '0.3.13', '0.3.14', '0.3.16', '0.4.1', '0.4.3', '0.4.4', '0.4.5', '0.4.6', '0.4.7', '0.4.8']",0.4.8,0.4.8,['noarch'],27.0,https://github.com/MPI-Dortmund/napari-boxmanager,"['pyh9208f05_0', 'pyhd8ed1ab_0']",0.2.9,conda-forge/napari-boxmanager/0.2.9,1.0,0.0,2023-04-11 23:43:50.353000+00:00,2023-12-09 00:57:52.283000+00:00,conda,noarch/napari-boxmanager-0.2.9-pyhd8ed1ab_0.conda,0.0,MPL-2.0,False,python,"['matplotlib-base', 'mrcfile', 'napari', 'numpy', 'pandas', 'pystardb', 'python >=3.10,<3.11']",noarch,1681256490435.0,None-any-None,pyhd8ed1ab_0,2023-04-11 23:43:50.796000+00:00,3b03e2e35c236ecb7f5954be5a40fed6,4c5890425cceeb7b3b85f26469748dec4c87692227934d776016699fe611fd1f,50549.0,conda-forge/napari-boxmanager/0.2.9/noarch/napari-boxmanager-0.2.9-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-boxmanager/0.2.9/noarch/napari-boxmanager-0.2.9-pyhd8ed1ab_0.conda,conda,0.2.9,conda-forge,['main'],public,,0.2.1,napari-boxmanager.get_reader,Open data with Box Manager,box_manager._reader:napari_get_reader,napari-boxmanager.get_reader,"['*.tloc', '*.temb', '*.tmap', '*.cbox', '*.box', '*.star', '*.mrc', '*.mrcs', '*.st', '*.coords', '*.rec', '*.cs', '*.tif', '*.tiff', '*.mrci']",True,2.1,napari-boxmanager,0.4.14,,Particle selection tool for cryo-em,"# napari-boxmanager [![License Mozilla Public License 2.0](https://img.shields.io/pypi/l/napari-boxmanager.svg?color=green)](https://github.com/mstabrin/napari-boxmanager/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-boxmanager.svg?color=green)](https://pypi.org/project/napari-boxmanager) @@ -11589,8 +12359,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/MPI-Dortmund/napari-boxmanager,Markus Stabrin,markus.stabrin@mpi-dortmund.mpg.de,MPL-2.0,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Mozilla Public License 2.0 (MPL 2.0)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['matplotlib', 'mrcfile', 'numpy <=1.23.5', 'pystardb >=0.4.2', 'napari >=0.4.17', 'pandas', 'scipy', 'tifffile', 'tqdm', ""mrcfile ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]",>=3.10,,['testing'],False,0.3.11,conda-forge/napari-boxmanager/0.3.11,0.3.12,conda-forge/napari-boxmanager/0.3.12,0.3.13,conda-forge/napari-boxmanager/0.3.13,conda,noarch/napari-boxmanager-0.3.11-pyhd8ed1ab_0.conda,0.0,MPL-2.0,False,python,"['matplotlib-base', 'mrcfile', 'napari', 'numpy <=1.23.5', 'pandas', 'pystardb', 'python >=3.10']",pyhd8ed1ab_0,1682331976914.0,None-any-None,noarch,2023-04-24 10:28:43.946000+00:00,c3982d61bfddf730f973422b5d8a049f,5cb0768cb0e87b2e38c13838d4c2061bcd3d0915b827074cf877fd968281eea4,61995.0,conda-forge/napari-boxmanager/0.3.11/noarch/napari-boxmanager-0.3.11-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-boxmanager/0.3.11/noarch/napari-boxmanager-0.3.11-pyhd8ed1ab_0.conda,conda,0.3.11,conda-forge,['main'],conda,noarch/napari-boxmanager-0.3.12-pyhd8ed1ab_0.conda,0.0,MPL-2.0,False,python,"['matplotlib-base', 'mrcfile', 'napari', 'numpy <=1.23.5', 'pandas', 'pystardb >=0.4.2', 'python >=3.10']",noarch,1682506524922.0,None-any-None,pyhd8ed1ab_0,2023-04-26 10:57:40.376000+00:00,44724e2b15e8b55762fb8565bda8839f,2578b02c43648e7dd157253468058b68f881828abd76f5fe360fb391a3c91c45,62158.0,conda-forge/napari-boxmanager/0.3.12/noarch/napari-boxmanager-0.3.12-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-boxmanager/0.3.12/noarch/napari-boxmanager-0.3.12-pyhd8ed1ab_0.conda,conda,0.3.12,conda-forge,['main'],conda,noarch/napari-boxmanager-0.3.13-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['matplotlib-base', 'mrcfile', 'napari', 'numpy <=1.23.5', 'pandas', 'pystardb >=0.4.2', 'python >=3.10']",MPL-2.0,python,1682676756291.0,2023-04-28 10:14:54.994000+00:00,9896e24ba18ae2743ab894ba37cba791,7d5e2ceb9dad95fdbe789ac1d54b81c6f02125c1dcdba5f64d2678d44b2bf1d6,62186.0,conda-forge/napari-boxmanager/0.3.13/noarch/napari-boxmanager-0.3.13-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-boxmanager/0.3.13/noarch/napari-boxmanager-0.3.13-pyhd8ed1ab_0.conda,conda,0.3.13,conda-forge,['main'],,napari-boxmanager.get_writer,Save image data with Box Manager,box_manager._writer:napari_get_writer,napari-boxmanager.select_metric,Select box metrics,box_manager._qt.SelectMetric:SelectMetricWidget,napari-boxmanager.organize_box,Organize box files to the respective mrc,box_manager._qt.OrganizeBox:OrganizeBoxWidget,napari-boxmanager.select_metric,boxmanager,False,napari-boxmanager.organize_layer,organize_layer,False,napari-boxmanager.bandpass_filter,bandpass_filter,False,napari-boxmanager.organize_box,match_mics,False,napari-boxmanager.bandpass_filter,Filter image layer,box_manager._qt.FilterImage:FilterImageWidget,napari-boxmanager.get_writer,"['points*', 'image*', 'shapes*']",,,,,,,,,0.3.14,conda-forge/napari-boxmanager/0.3.14,0.3.16,conda-forge/napari-boxmanager/0.3.16,0.4.1,conda-forge/napari-boxmanager/0.4.1,conda,noarch/napari-boxmanager-0.3.14-pyhd8ed1ab_0.conda,0.0,MPL-2.0,False,python,"['matplotlib-base', 'mrcfile', 'napari', 'numpy <=1.23.5', 'pandas', 'pystardb >=0.4.2', 'python >=3.10']",noarch,1687966825801.0,None-any-None,pyhd8ed1ab_0,2023-06-28 15:43:00.858000+00:00,793c2af2b0689fca4c954c6907871d84,7bce7aa1e5edc92a0da8e4f40ee6ccfd25ca4efd55010aae0266208f5e1d32c1,62712.0,conda-forge/napari-boxmanager/0.3.14/noarch/napari-boxmanager-0.3.14-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-boxmanager/0.3.14/noarch/napari-boxmanager-0.3.14-pyhd8ed1ab_0.conda,conda,0.3.14,conda-forge,['main'],conda,noarch/napari-boxmanager-0.3.16-pyhd8ed1ab_0.conda,0.0,MPL-2.0,False,python,"['matplotlib-base', 'mrcfile', 'napari', 'numpy <=1.23.5', 'pandas', 'pystardb >=0.4.2', 'python >=3.10', 'qtpy', 'scipy', 'tifffile', 'tqdm']",noarch,1687968864448.0,None-any-None,pyhd8ed1ab_0,2023-06-28 16:16:43.395000+00:00,36e7a8dbca33f671482c92e2ce50ded9,fdf9575c4e213e2e5dbbbc74f32dad6a8a8e9eec98c666c8b87b0b154d95bc31,62517.0,conda-forge/napari-boxmanager/0.3.16/noarch/napari-boxmanager-0.3.16-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-boxmanager/0.3.16/noarch/napari-boxmanager-0.3.16-pyhd8ed1ab_0.conda,conda,0.3.16,conda-forge,['main'],conda,noarch/napari-boxmanager-0.4.1-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['matplotlib-base', 'mrcfile', 'napari >=0.4.18', 'numpy <=1.23.5', 'pandas', 'pystardb >=0.4.2', 'python >=3.10', 'qtpy', 'scipy', 'tifffile', 'tqdm']",MPL-2.0,python,1690323279337.0,2023-07-25 22:17:05.613000+00:00,60cae94d9159e4d4f95767f865a9ff5f,54579b1d5991b10018d5eb7b53b3fc7386f54b3e0296819316d5cf48365ce3da,64337.0,conda-forge/napari-boxmanager/0.4.1/noarch/napari-boxmanager-0.4.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-boxmanager/0.4.1/noarch/napari-boxmanager-0.4.1-pyhd8ed1ab_0.conda,conda,0.4.1,conda-forge,['main'],,,,napari-boxmanager.organize_layer,Add new layers with default values,box_manager._qt.OrganizeLayer:OrganizeLayerWidget,0.4.3,conda-forge/napari-boxmanager/0.4.3,0.4.4,conda-forge/napari-boxmanager/0.4.4,conda,noarch/napari-boxmanager-0.4.3-pyh9208f05_0.conda,0.0,MPL-2.0,False,python,"['matplotlib-base', 'mrcfile', 'napari >=0.4.17', 'numpy <=1.23.5', 'pandas', 'pystardb >=0.4.2', 'python >=3.10', 'qtpy', 'scipy', 'tifffile', 'tqdm']",noarch,1694110624676.0,None-any-None,pyh9208f05_0,2023-09-07 18:19:07.546000+00:00,0f8f0fac325f949ea1811555a7011b7a,2bf89eab0766bbed845bb7fe68d8d0e159a1db14d012161e192ef2be6ff71f2a,64649.0,conda-forge/napari-boxmanager/0.4.3/noarch/napari-boxmanager-0.4.3-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-boxmanager/0.4.3/noarch/napari-boxmanager-0.4.3-pyh9208f05_0.conda,conda,0.4.3,conda-forge,['main'],conda,noarch/napari-boxmanager-0.4.4-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['matplotlib-base', 'mrcfile', 'napari >=0.4.17', 'numpy <=1.23.5', 'pandas', 'pystardb >=0.4.2', 'python >=3.10', 'qtpy', 'scipy', 'tifffile', 'tqdm']",MPL-2.0,python,1694111384116.0,2023-09-07 18:31:37.989000+00:00,55d794ac7949ab859fff9dd425ad86c3,c2c5e9c44f323d67985a77457efa298cce34dde702c1e93caaf36cda8d77992a,65039.0,conda-forge/napari-boxmanager/0.4.4/noarch/napari-boxmanager-0.4.4-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-boxmanager/0.4.4/noarch/napari-boxmanager-0.4.4-pyh9208f05_0.conda,conda,0.4.4,conda-forge,['main'],,,,,,,,,,,,,,,,,,,"['.tloc', '.temb', '.tmap', '.cbox', '.box', '.star', '.mrc', '.mrcs', '.st', '.coords', '.rec', '.mrci']",,,,,,,,,,,,,conda,noarch/napari-boxmanager-0.4.5-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['matplotlib-base', 'mrcfile', 'napari >=0.4.17', 'numpy <=1.23.5', 'pandas', 'pystardb >=0.4.2', 'python >=3.10', 'qtpy', 'scipy', 'tifffile', 'tqdm']",MPL-2.0,python,1698093122944.0,2023-10-23 20:33:54.159000+00:00,e9b675e321b262e31ad91869712348bc,328a5bfbc0c32545e3073441278cb6c6cc72df448f488b8a05bdb4075a7f6b78,65271.0,conda-forge/napari-boxmanager/0.4.5/noarch/napari-boxmanager-0.4.5-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-boxmanager/0.4.5/noarch/napari-boxmanager-0.4.5-pyh9208f05_0.conda,conda,0.4.5,conda-forge,['main'],0.4.5,conda-forge/napari-boxmanager/0.4.5,conda,noarch/napari-boxmanager-0.4.6-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['matplotlib-base', 'mrcfile', 'napari >=0.4.17', 'numpy <=1.23.5', 'pandas', 'pystardb >=0.4.2', 'python >=3.10', 'qtpy', 'scipy', 'tifffile', 'tqdm']",MPL-2.0,1700239466970.0,2023-11-17 16:46:33.753000+00:00,b7b8e3e750643916be8544302d1b52c9,1e2cc1b05b73e3e348421d21bcb63ad9ccf6e497cce48cb1d1f0a7f0ddf8c59b,65028.0,conda-forge/napari-boxmanager/0.4.6/noarch/napari-boxmanager-0.4.6-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-boxmanager/0.4.6/noarch/napari-boxmanager-0.4.6-pyh9208f05_0.conda,conda,0.4.6,conda-forge,['main'],conda,noarch/napari-boxmanager-0.4.7-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['matplotlib-base', 'mrcfile', 'napari >=0.4.17', 'numpy <=1.23.5', 'pandas', 'pystardb >=0.4.2', 'python >=3.10', 'qtpy', 'scipy', 'tifffile', 'tqdm']",MPL-2.0,1701027573259.0,2023-11-26 19:41:47.730000+00:00,16bf0ca13de8f70b81d0fbba9330b903,b31e46c3f2ec4ff38e2d3496ec8ca7c18af7575f73ab98f75452bdb14c28b4f1,65585.0,conda-forge/napari-boxmanager/0.4.7/noarch/napari-boxmanager-0.4.7-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-boxmanager/0.4.7/noarch/napari-boxmanager-0.4.7-pyh9208f05_0.conda,conda,0.4.7,conda-forge,['main'],conda,noarch/napari-boxmanager-0.4.8-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['matplotlib-base', 'mrcfile', 'napari >=0.4.17', 'numpy <=1.23.5', 'pandas', 'pystardb >=0.4.2', 'python >=3.10', 'qtpy', 'scipy', 'tifffile', 'tqdm']",MPL-2.0,1702083324333.0,2023-12-09 00:57:45.041000+00:00,3dfd61cc972c53761ddb4c72aee2438d,e58fc9bdeaddfbca19163eeef3d4bfb1813692337be389f4d3cade4d7662b019,65591.0,conda-forge/napari-boxmanager/0.4.8/noarch/napari-boxmanager-0.4.8-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-boxmanager/0.4.8/noarch/napari-boxmanager-0.4.8-pyh9208f05_0.conda,conda,0.4.8,conda-forge,['main'],,, -111,napari-brainbow-diagnose,0.1.3,Napari Brainbow Diagnose,Visualize and Diagnose brainbow dataset in color space.,Clement Caporal,BSD-3-Clause,https://github.com/LaboratoryOpticsBiosciences/napari-brainbow-diagnose,643eb8cb408967d7b0bbcd65,['conda'],,https://github.com/LaboratoryOpticsBiosciences/napari-brainbow-diagnose,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-brainbow-diagnose,http://api.anaconda.org/packages/conda-forge/napari-brainbow-diagnose,http://anaconda.org/conda-forge/napari-brainbow-diagnose,['0.1.3'],0.1.3,0.1.3,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.3,conda-forge/napari-brainbow-diagnose/0.1.3,1.0,0.0,2023-04-18 15:35:36.981000+00:00,2023-06-18 17:28:02.704000+00:00,conda,noarch/napari-brainbow-diagnose-0.1.3-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib', 'napari', 'numpy', 'pooch', 'python >=3.8,<3.11', 'qtpy', 'scikit-image']",noarch,1681832010836.0,None-any-None,pyhd8ed1ab_0,2023-04-18 15:35:37.250000+00:00,2ee152dafc957200e416699560f31563,1ff8291db56a768fb471f9331e809b11406168f14832bb79d6469f3587f922dd,20245.0,conda-forge/napari-brainbow-diagnose/0.1.3/noarch/napari-brainbow-diagnose-0.1.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-brainbow-diagnose/0.1.3/noarch/napari-brainbow-diagnose-0.1.3-pyhd8ed1ab_0.conda,conda,0.1.3,conda-forge,['main'],public,,0.2.1,napari-brainbow-diagnose.make_rgb_cube_data,Load sample data from Napari Brainbow Diagnose,napari_brainbow_diagnose._sample_data:make_rgb_cube_data,,,,2.1,napari-brainbow-diagnose,0.1.3,,Visualize and Diagnose brainbow dataset in color space.,"# napari-brainbow-diagnose +",text/markdown,https://github.com/MPI-Dortmund/napari-boxmanager,Markus Stabrin,markus.stabrin@mpi-dortmund.mpg.de,MPL-2.0,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Mozilla Public License 2.0 (MPL 2.0)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['matplotlib', 'mrcfile', 'numpy<=1.23.5', 'pystardb>=0.4.2', 'napari>=0.4.17', 'pandas', 'scipy', 'tifffile', 'tqdm', 'mrcfile; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'tox; extra == ""testing""']",>=3.10,,['testing'],False,0.3.11,conda-forge/napari-boxmanager/0.3.11,0.3.12,conda-forge/napari-boxmanager/0.3.12,0.3.13,conda-forge/napari-boxmanager/0.3.13,conda,noarch/napari-boxmanager-0.3.11-pyhd8ed1ab_0.conda,0.0,MPL-2.0,False,python,"['matplotlib-base', 'mrcfile', 'napari', 'numpy <=1.23.5', 'pandas', 'pystardb', 'python >=3.10']",pyhd8ed1ab_0,1682331976914.0,None-any-None,noarch,2023-04-24 10:28:43.946000+00:00,c3982d61bfddf730f973422b5d8a049f,5cb0768cb0e87b2e38c13838d4c2061bcd3d0915b827074cf877fd968281eea4,61995.0,conda-forge/napari-boxmanager/0.3.11/noarch/napari-boxmanager-0.3.11-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-boxmanager/0.3.11/noarch/napari-boxmanager-0.3.11-pyhd8ed1ab_0.conda,conda,0.3.11,conda-forge,['main'],conda,noarch/napari-boxmanager-0.3.12-pyhd8ed1ab_0.conda,0.0,MPL-2.0,False,python,"['matplotlib-base', 'mrcfile', 'napari', 'numpy <=1.23.5', 'pandas', 'pystardb >=0.4.2', 'python >=3.10']",noarch,1682506524922.0,None-any-None,pyhd8ed1ab_0,2023-04-26 10:57:40.376000+00:00,44724e2b15e8b55762fb8565bda8839f,2578b02c43648e7dd157253468058b68f881828abd76f5fe360fb391a3c91c45,62158.0,conda-forge/napari-boxmanager/0.3.12/noarch/napari-boxmanager-0.3.12-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-boxmanager/0.3.12/noarch/napari-boxmanager-0.3.12-pyhd8ed1ab_0.conda,conda,0.3.12,conda-forge,['main'],conda,noarch/napari-boxmanager-0.3.13-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['matplotlib-base', 'mrcfile', 'napari', 'numpy <=1.23.5', 'pandas', 'pystardb >=0.4.2', 'python >=3.10']",MPL-2.0,python,1682676756291.0,2023-04-28 10:14:54.994000+00:00,9896e24ba18ae2743ab894ba37cba791,7d5e2ceb9dad95fdbe789ac1d54b81c6f02125c1dcdba5f64d2678d44b2bf1d6,62186.0,conda-forge/napari-boxmanager/0.3.13/noarch/napari-boxmanager-0.3.13-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-boxmanager/0.3.13/noarch/napari-boxmanager-0.3.13-pyhd8ed1ab_0.conda,conda,0.3.13,conda-forge,['main'],,napari-boxmanager.get_writer,Save image data with Box Manager,box_manager._writer:napari_get_writer,napari-boxmanager.select_metric,Select box metrics,box_manager._qt.SelectMetric:SelectMetricWidget,napari-boxmanager.organize_box,Organize box files to the respective mrc,box_manager._qt.OrganizeBox:OrganizeBoxWidget,napari-boxmanager.select_metric,boxmanager,False,napari-boxmanager.organize_layer,organize_layer,False,napari-boxmanager.bandpass_filter,bandpass_filter,False,napari-boxmanager.organize_box,match_mics,False,napari-boxmanager.bandpass_filter,Filter image layer,box_manager._qt.FilterImage:FilterImageWidget,napari-boxmanager.get_writer,"['points*', 'image*', 'shapes*']",,,,,,,,,0.3.14,conda-forge/napari-boxmanager/0.3.14,0.3.16,conda-forge/napari-boxmanager/0.3.16,0.4.1,conda-forge/napari-boxmanager/0.4.1,conda,noarch/napari-boxmanager-0.3.14-pyhd8ed1ab_0.conda,0.0,MPL-2.0,False,python,"['matplotlib-base', 'mrcfile', 'napari', 'numpy <=1.23.5', 'pandas', 'pystardb >=0.4.2', 'python >=3.10']",noarch,1687966825801.0,None-any-None,pyhd8ed1ab_0,2023-06-28 15:43:00.858000+00:00,793c2af2b0689fca4c954c6907871d84,7bce7aa1e5edc92a0da8e4f40ee6ccfd25ca4efd55010aae0266208f5e1d32c1,62712.0,conda-forge/napari-boxmanager/0.3.14/noarch/napari-boxmanager-0.3.14-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-boxmanager/0.3.14/noarch/napari-boxmanager-0.3.14-pyhd8ed1ab_0.conda,conda,0.3.14,conda-forge,['main'],conda,noarch/napari-boxmanager-0.3.16-pyhd8ed1ab_0.conda,0.0,MPL-2.0,False,python,"['matplotlib-base', 'mrcfile', 'napari', 'numpy <=1.23.5', 'pandas', 'pystardb >=0.4.2', 'python >=3.10', 'qtpy', 'scipy', 'tifffile', 'tqdm']",noarch,1687968864448.0,None-any-None,pyhd8ed1ab_0,2023-06-28 16:16:43.395000+00:00,36e7a8dbca33f671482c92e2ce50ded9,fdf9575c4e213e2e5dbbbc74f32dad6a8a8e9eec98c666c8b87b0b154d95bc31,62517.0,conda-forge/napari-boxmanager/0.3.16/noarch/napari-boxmanager-0.3.16-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-boxmanager/0.3.16/noarch/napari-boxmanager-0.3.16-pyhd8ed1ab_0.conda,conda,0.3.16,conda-forge,['main'],conda,noarch/napari-boxmanager-0.4.1-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['matplotlib-base', 'mrcfile', 'napari >=0.4.18', 'numpy <=1.23.5', 'pandas', 'pystardb >=0.4.2', 'python >=3.10', 'qtpy', 'scipy', 'tifffile', 'tqdm']",MPL-2.0,python,1690323279337.0,2023-07-25 22:17:05.613000+00:00,60cae94d9159e4d4f95767f865a9ff5f,54579b1d5991b10018d5eb7b53b3fc7386f54b3e0296819316d5cf48365ce3da,64337.0,conda-forge/napari-boxmanager/0.4.1/noarch/napari-boxmanager-0.4.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-boxmanager/0.4.1/noarch/napari-boxmanager-0.4.1-pyhd8ed1ab_0.conda,conda,0.4.1,conda-forge,['main'],,,,napari-boxmanager.organize_layer,Add new layers with default values,box_manager._qt.OrganizeLayer:OrganizeLayerWidget,0.4.3,conda-forge/napari-boxmanager/0.4.3,0.4.4,conda-forge/napari-boxmanager/0.4.4,conda,noarch/napari-boxmanager-0.4.3-pyh9208f05_0.conda,0.0,MPL-2.0,False,python,"['matplotlib-base', 'mrcfile', 'napari >=0.4.17', 'numpy <=1.23.5', 'pandas', 'pystardb >=0.4.2', 'python >=3.10', 'qtpy', 'scipy', 'tifffile', 'tqdm']",noarch,1694110624676.0,None-any-None,pyh9208f05_0,2023-09-07 18:19:07.546000+00:00,0f8f0fac325f949ea1811555a7011b7a,2bf89eab0766bbed845bb7fe68d8d0e159a1db14d012161e192ef2be6ff71f2a,64649.0,conda-forge/napari-boxmanager/0.4.3/noarch/napari-boxmanager-0.4.3-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-boxmanager/0.4.3/noarch/napari-boxmanager-0.4.3-pyh9208f05_0.conda,conda,0.4.3,conda-forge,['main'],conda,noarch/napari-boxmanager-0.4.4-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['matplotlib-base', 'mrcfile', 'napari >=0.4.17', 'numpy <=1.23.5', 'pandas', 'pystardb >=0.4.2', 'python >=3.10', 'qtpy', 'scipy', 'tifffile', 'tqdm']",MPL-2.0,python,1694111384116.0,2023-09-07 18:31:37.989000+00:00,55d794ac7949ab859fff9dd425ad86c3,c2c5e9c44f323d67985a77457efa298cce34dde702c1e93caaf36cda8d77992a,65039.0,conda-forge/napari-boxmanager/0.4.4/noarch/napari-boxmanager-0.4.4-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-boxmanager/0.4.4/noarch/napari-boxmanager-0.4.4-pyh9208f05_0.conda,conda,0.4.4,conda-forge,['main'],,,,,,,,,,,,,,,,"['.tloc', '.temb', '.tmap', '.cbox', '.box', '.star', '.mrc', '.mrcs', '.st', '.coords', '.rec', '.mrci']",,,,,,,,,,,,,conda,noarch/napari-boxmanager-0.4.5-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['matplotlib-base', 'mrcfile', 'napari >=0.4.17', 'numpy <=1.23.5', 'pandas', 'pystardb >=0.4.2', 'python >=3.10', 'qtpy', 'scipy', 'tifffile', 'tqdm']",MPL-2.0,python,1698093122944.0,2023-10-23 20:33:54.159000+00:00,e9b675e321b262e31ad91869712348bc,328a5bfbc0c32545e3073441278cb6c6cc72df448f488b8a05bdb4075a7f6b78,65271.0,conda-forge/napari-boxmanager/0.4.5/noarch/napari-boxmanager-0.4.5-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-boxmanager/0.4.5/noarch/napari-boxmanager-0.4.5-pyh9208f05_0.conda,conda,0.4.5,conda-forge,['main'],conda,noarch/napari-boxmanager-0.4.6-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['matplotlib-base', 'mrcfile', 'napari >=0.4.17', 'numpy <=1.23.5', 'pandas', 'pystardb >=0.4.2', 'python >=3.10', 'qtpy', 'scipy', 'tifffile', 'tqdm']",MPL-2.0,python,1700239466970.0,2023-11-17 16:46:33.753000+00:00,b7b8e3e750643916be8544302d1b52c9,1e2cc1b05b73e3e348421d21bcb63ad9ccf6e497cce48cb1d1f0a7f0ddf8c59b,65028.0,conda-forge/napari-boxmanager/0.4.6/noarch/napari-boxmanager-0.4.6-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-boxmanager/0.4.6/noarch/napari-boxmanager-0.4.6-pyh9208f05_0.conda,conda,0.4.6,conda-forge,['main'],0.4.5,conda-forge/napari-boxmanager/0.4.5,conda,noarch/napari-boxmanager-0.4.7-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['matplotlib-base', 'mrcfile', 'napari >=0.4.17', 'numpy <=1.23.5', 'pandas', 'pystardb >=0.4.2', 'python >=3.10', 'qtpy', 'scipy', 'tifffile', 'tqdm']",MPL-2.0,1701027573259.0,2023-11-26 19:41:47.730000+00:00,16bf0ca13de8f70b81d0fbba9330b903,b31e46c3f2ec4ff38e2d3496ec8ca7c18af7575f73ab98f75452bdb14c28b4f1,65585.0,conda-forge/napari-boxmanager/0.4.7/noarch/napari-boxmanager-0.4.7-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-boxmanager/0.4.7/noarch/napari-boxmanager-0.4.7-pyh9208f05_0.conda,conda,0.4.7,conda-forge,['main'],0.4.6,conda-forge/napari-boxmanager/0.4.6,conda,noarch/napari-boxmanager-0.4.8-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['matplotlib-base', 'mrcfile', 'napari >=0.4.17', 'numpy <=1.23.5', 'pandas', 'pystardb >=0.4.2', 'python >=3.10', 'qtpy', 'scipy', 'tifffile', 'tqdm']",MPL-2.0,1702083324333.0,2023-12-09 00:57:45.041000+00:00,3dfd61cc972c53761ddb4c72aee2438d,e58fc9bdeaddfbca19163eeef3d4bfb1813692337be389f4d3cade4d7662b019,65591.0,conda-forge/napari-boxmanager/0.4.8/noarch/napari-boxmanager-0.4.8-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-boxmanager/0.4.8/noarch/napari-boxmanager-0.4.8-pyh9208f05_0.conda,conda,0.4.8,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,, +119,napari-brainbow-diagnose,0.1.3,Napari Brainbow Diagnose,Visualize and Diagnose brainbow dataset in color space.,Clement Caporal,BSD-3-Clause,https://github.com/LaboratoryOpticsBiosciences/napari-brainbow-diagnose,643eb8cb408967d7b0bbcd65,['conda'],,https://github.com/LaboratoryOpticsBiosciences/napari-brainbow-diagnose,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-brainbow-diagnose,http://api.anaconda.org/packages/conda-forge/napari-brainbow-diagnose,http://anaconda.org/conda-forge/napari-brainbow-diagnose,['0.1.3'],0.1.3,0.1.3,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.3,conda-forge/napari-brainbow-diagnose/0.1.3,1.0,0.0,2023-04-18 15:35:36.981000+00:00,2023-06-18 17:28:02.704000+00:00,conda,noarch/napari-brainbow-diagnose-0.1.3-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib', 'napari', 'numpy', 'pooch', 'python >=3.8,<3.11', 'qtpy', 'scikit-image']",noarch,1681832010836.0,None-any-None,pyhd8ed1ab_0,2023-04-18 15:35:37.250000+00:00,2ee152dafc957200e416699560f31563,1ff8291db56a768fb471f9331e809b11406168f14832bb79d6469f3587f922dd,20245.0,conda-forge/napari-brainbow-diagnose/0.1.3/noarch/napari-brainbow-diagnose-0.1.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-brainbow-diagnose/0.1.3/noarch/napari-brainbow-diagnose-0.1.3-pyhd8ed1ab_0.conda,conda,0.1.3,conda-forge,['main'],public,,0.2.1,napari-brainbow-diagnose.make_rgb_cube_data,Load sample data from Napari Brainbow Diagnose,napari_brainbow_diagnose._sample_data:make_rgb_cube_data,,,,2.1,napari-brainbow-diagnose,0.1.3,,Visualize and Diagnose brainbow dataset in color space.,"# napari-brainbow-diagnose [![License BSD-3](https://img.shields.io/pypi/l/napari-brainbow-diagnose.svg?color=green)](https://github.com/LaboratoryOpticsBiosciences/napari-brainbow-diagnose/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-brainbow-diagnose.svg?color=green)](https://pypi.org/project/napari-brainbow-diagnose) @@ -11695,8 +12465,8 @@ https://github.com/napari/cookiecutter-napari-plugin#getting-started and review the napari docs for plugin developers: https://napari.org/stable/plugins/index.html --> -",text/markdown,https://github.com/LaboratoryOpticsBiosciences/napari-brainbow-diagnose,Clement Caporal,clement.caporal@polytechnique.edu,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'pooch', 'matplotlib', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""pre-commit ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/LaboratoryOpticsBiosciences/napari-brainbow-diagnose/issues', 'Documentation, https://github.com/LaboratoryOpticsBiosciences/napari-brainbow-diagnose#README.md', 'Source Code, https://github.com/LaboratoryOpticsBiosciences/napari-brainbow-diagnose', 'User Support, https://github.com/LaboratoryOpticsBiosciences/napari-brainbow-diagnose/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-brainbow-diagnose.load_chroms_data_sample,Load chroms data sample from Napari Brainbow Diagnose,napari_brainbow_diagnose._sample_data:load_chroms_data_sample,napari-brainbow-diagnose.tooltip_pointer_widget,Brainbow Tooltip,napari_brainbow_diagnose._tooltip_pointer:tooltip_pointer_widget,napari-brainbow-diagnose.DiagnoseWidget,Diagnose Brainbow Image,napari_brainbow_diagnose._widget:DiagnoseWidget,napari-brainbow-diagnose.DiagnoseWidget,Diagnose Brainbow Image,False,napari-brainbow-diagnose.tooltip_pointer_widget,Brainbow Tooltip,False,,,,,,,,,,,,,,,,,napari-brainbow-diagnose.make_rgb_cube_data,unique_id.1,RGB Cube,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-brainbow-diagnose.load_chroms_data_sample,unique_id.2,Chroms Cortex Sample,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -112,napari-brainways,0.1.11.1,Brainways,Brainways UI,Ben Kantor,GPL-3.0,https://github.com/bkntr/napari-brainways,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.0,napari-brainways.load_sample_project,Load Brainways sample project,napari_brainways._sample_project:load_sample_project,napari-brainways.read_bwp,['*.bwp'],True,2.1,napari-brainways,0.1.11.1,,Brainways UI,"# Overview +",text/markdown,https://github.com/LaboratoryOpticsBiosciences/napari-brainbow-diagnose,Clement Caporal,clement.caporal@polytechnique.edu,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'pooch', 'matplotlib', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""pre-commit ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/LaboratoryOpticsBiosciences/napari-brainbow-diagnose/issues', 'Documentation, https://github.com/LaboratoryOpticsBiosciences/napari-brainbow-diagnose#README.md', 'Source Code, https://github.com/LaboratoryOpticsBiosciences/napari-brainbow-diagnose', 'User Support, https://github.com/LaboratoryOpticsBiosciences/napari-brainbow-diagnose/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-brainbow-diagnose.load_chroms_data_sample,Load chroms data sample from Napari Brainbow Diagnose,napari_brainbow_diagnose._sample_data:load_chroms_data_sample,napari-brainbow-diagnose.tooltip_pointer_widget,Brainbow Tooltip,napari_brainbow_diagnose._tooltip_pointer:tooltip_pointer_widget,napari-brainbow-diagnose.DiagnoseWidget,Diagnose Brainbow Image,napari_brainbow_diagnose._widget:DiagnoseWidget,napari-brainbow-diagnose.DiagnoseWidget,Diagnose Brainbow Image,False,napari-brainbow-diagnose.tooltip_pointer_widget,Brainbow Tooltip,False,,,,,,,,,,,,,,,,,napari-brainbow-diagnose.make_rgb_cube_data,unique_id.1,RGB Cube,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-brainbow-diagnose.load_chroms_data_sample,unique_id.2,Chroms Cortex Sample,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +120,napari-brainways,0.1.11.1,Brainways,Brainways UI,Ben Kantor,GPL-3.0,https://github.com/bkntr/napari-brainways,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.0,napari-brainways.load_sample_project,Load Brainways sample project,napari_brainways._sample_project:load_sample_project,napari-brainways.read_bwp,['*.bwp'],True,2.1,napari-brainways,0.1.11.1,,Brainways UI,"# Overview [![DOI](https://img.shields.io/badge/DOI-10.1101/2023.05.25.542252-green.svg)](https://doi.org/10.1101/2023.05.25.542252) [![License GNU GPL v3.0](https://img.shields.io/pypi/l/napari-brainways.svg?color=green)](https://github.com/bkntr/napari-brainways/raw/main/LICENSE) @@ -11798,8 +12568,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/bkntr/napari-brainways,Ben Kantor,benkantor@mail.tau.ac.il,GPL-3.0,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Topic :: Scientific/Engineering :: Image Processing']","['brainways[all] ==0.1.11', 'datasets ==2.15.0', 'importlib-resources', 'napari[all] ==0.4.18', 'qtpy ==2.3.1', ""brainways-reg-model ; extra == 'all'"", ""py ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt <4.1.0 ; extra == 'testing'"", ""tox ; extra == 'testing'""]",>=3.9,"['Bug Tracker, https://github.com/bkntr/napari-brainways/issues', 'Documentation, https://github.com/bkntr/napari-brainways#README.md', 'Source Code, https://github.com/bkntr/napari-brainways', 'User Support, https://github.com/bkntr/napari-brainways/issues']","['all', 'testing']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-brainways.load_sample_project_annotated,Load Brainways sample annotated project,napari_brainways._sample_project:load_sample_project_annotated,napari-brainways.make_qwidget,Make BrainwaysUI widget,napari_brainways.brainways_ui:BrainwaysUI,napari-brainways.read_bwp,"Read "".bwp"" files",napari_brainways.napari_reader:get_reader,napari-brainways.make_qwidget,BrainwaysUI,False,,,,,,,,,,,,,,,,,,,,napari-brainways.load_sample_project,sample_project,Sample project,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-brainways.load_sample_project_annotated,sample_project_annotated,Annotated sample project,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -113,napari-brightness-contrast,0.1.8,napari-brightness-contrast,Advanced layer visualization options,Robert Haase,BSD-3-Clause,https://github.com/haesleinhuepf/napari-brightness-contrast,61fd1d31eacb7e2ec1a9131b,['conda'],,https://github.com/haesleinhuepf/napari-brightness-contrast,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-brightness-contrast,http://api.anaconda.org/packages/conda-forge/napari-brightness-contrast,http://anaconda.org/conda-forge/napari-brightness-contrast,"['0.1.6', '0.1.7', '0.1.8']",0.1.8,0.1.8,['noarch'],5.0,,['pyhd8ed1ab_0'],0.1.6,conda-forge/napari-brightness-contrast/0.1.6,1.0,0.0,2022-02-04 12:33:50.582000+00:00,2023-06-18 08:40:46.678000+00:00,conda,noarch/napari-brightness-contrast-0.1.6-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'pyqtgraph', 'python >=3.7', 'superqt']",noarch,1643977873846.0,None-any-None,pyhd8ed1ab_0,2022-02-04 12:33:50.954000+00:00,76bc15cf5c4e48b244638e212d731970,None,11712.0,conda-forge/napari-brightness-contrast/0.1.6/noarch/napari-brightness-contrast-0.1.6-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-brightness-contrast/0.1.6/noarch/napari-brightness-contrast-0.1.6-pyhd8ed1ab_0.tar.bz2,conda,0.1.6,conda-forge,['main'],public,,0.2.1,napari-brightness-contrast.BrightnessContrast,BrightnessContrast,napari_brightness_contrast._dock_widget:BrightnessContrast,,,,2.1,napari-brightness-contrast,0.1.8,,Advanced layer visualization options,"# napari-brightness-contrast +",text/markdown,https://github.com/bkntr/napari-brainways,Ben Kantor,benkantor@mail.tau.ac.il,GPL-3.0,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Topic :: Scientific/Engineering :: Image Processing']","['brainways[all] ==0.1.11', 'datasets ==2.15.0', 'importlib-resources', 'napari[all] ==0.4.18', 'qtpy ==2.3.1', ""brainways-reg-model ; extra == 'all'"", ""py ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt <4.1.0 ; extra == 'testing'"", ""tox ; extra == 'testing'""]",>=3.9,"['Bug Tracker, https://github.com/bkntr/napari-brainways/issues', 'Documentation, https://github.com/bkntr/napari-brainways#README.md', 'Source Code, https://github.com/bkntr/napari-brainways', 'User Support, https://github.com/bkntr/napari-brainways/issues']","['all', 'testing']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-brainways.load_sample_project_annotated,Load Brainways sample annotated project,napari_brainways._sample_project:load_sample_project_annotated,napari-brainways.make_qwidget,Make BrainwaysUI widget,napari_brainways.brainways_ui:BrainwaysUI,napari-brainways.read_bwp,"Read "".bwp"" files",napari_brainways.napari_reader:get_reader,napari-brainways.make_qwidget,BrainwaysUI,False,,,,,,,,,,,,,,,,,,,,napari-brainways.load_sample_project,sample_project,Sample project,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-brainways.load_sample_project_annotated,sample_project_annotated,Annotated sample project,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +121,napari-brightness-contrast,0.1.8,napari-brightness-contrast,Advanced layer visualization options,Robert Haase,BSD-3-Clause,https://github.com/haesleinhuepf/napari-brightness-contrast,61fd1d31eacb7e2ec1a9131b,['conda'],,https://github.com/haesleinhuepf/napari-brightness-contrast,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-brightness-contrast,http://api.anaconda.org/packages/conda-forge/napari-brightness-contrast,http://anaconda.org/conda-forge/napari-brightness-contrast,"['0.1.6', '0.1.7', '0.1.8']",0.1.8,0.1.8,['noarch'],5.0,,['pyhd8ed1ab_0'],0.1.6,conda-forge/napari-brightness-contrast/0.1.6,1.0,0.0,2022-02-04 12:33:50.582000+00:00,2023-06-18 08:40:46.678000+00:00,conda,noarch/napari-brightness-contrast-0.1.6-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'pyqtgraph', 'python >=3.7', 'superqt']",noarch,1643977873846.0,None-any-None,pyhd8ed1ab_0,2022-02-04 12:33:50.954000+00:00,76bc15cf5c4e48b244638e212d731970,None,11712.0,conda-forge/napari-brightness-contrast/0.1.6/noarch/napari-brightness-contrast-0.1.6-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-brightness-contrast/0.1.6/noarch/napari-brightness-contrast-0.1.6-pyhd8ed1ab_0.tar.bz2,conda,0.1.6,conda-forge,['main'],public,,0.2.1,napari-brightness-contrast.BrightnessContrast,BrightnessContrast,napari_brightness_contrast._dock_widget:BrightnessContrast,,,,2.1,napari-brightness-contrast,0.1.8,,Advanced layer visualization options,"# napari-brightness-contrast [![License](https://img.shields.io/pypi/l/napari-brightness-contrast.svg?color=green)](https://github.com/haesleinhuepf/napari-brightness-contrast/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-brightness-contrast.svg?color=green)](https://pypi.org/project/napari-brightness-contrast) @@ -11862,8 +12632,8 @@ If you encounter any problems, please [open a thread on image.sc](https://image. [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/haesleinhuepf/napari-brightness-contrast,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'napari', 'numpy', 'pyqtgraph', 'superqt', 'napari-tools-menu', ""pytest ; extra == 'tests'"", ""pytest-qt ; extra == 'tests'""]",>=3.7,"['Bug Tracker, https://github.com/haesleinhuepf/napari-brightness-contrast/issues', 'Documentation, https://github.com/haesleinhuepf/napari-brightness-contrast#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-brightness-contrast', 'User Support, https://github.com/haesleinhuepf/napari-brightness-contrast/issues']",['tests'],True,0.1.7,conda-forge/napari-brightness-contrast/0.1.7,0.1.8,conda-forge/napari-brightness-contrast/0.1.8,,,conda,noarch/napari-brightness-contrast-0.1.7-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'pyqtgraph', 'python >=3.7', 'superqt']",pyhd8ed1ab_0,1647083370288.0,None-any-None,noarch,2022-03-12 11:11:39.802000+00:00,f041c2fed451240405583dc03c30752c,None,12298.0,conda-forge/napari-brightness-contrast/0.1.7/noarch/napari-brightness-contrast-0.1.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-brightness-contrast/0.1.7/noarch/napari-brightness-contrast-0.1.7-pyhd8ed1ab_0.tar.bz2,conda,0.1.7,conda-forge,['main'],conda,noarch/napari-brightness-contrast-0.1.8-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'pyqtgraph', 'python >=3.7', 'superqt']",noarch,1664125151019.0,None-any-None,pyhd8ed1ab_0,2022-09-25 17:01:43.992000+00:00,6294abe0cc2341546aa68178891fc9f3,None,12563.0,conda-forge/napari-brightness-contrast/0.1.8/noarch/napari-brightness-contrast-0.1.8-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-brightness-contrast/0.1.8/noarch/napari-brightness-contrast-0.1.8-pyhd8ed1ab_0.tar.bz2,conda,0.1.8,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-brightness-contrast.BrightnessContrast,BrightnessContrast,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -114,napari-brushsettings,0.0.2,napari-brushsettings,A simple plugin to set the brush settings for segmentation in napari,Philipp Schoennenbeck,BSD-3-Clause,https://github.com/Croxa/napari-brushsettings,620503ed8d5f58936403a8f8,['conda'],,https://github.com/Croxa/napari-brushsettings,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-brushsettings,http://api.anaconda.org/packages/conda-forge/napari-brushsettings,http://anaconda.org/conda-forge/napari-brushsettings,['0.0.2'],0.0.2,0.0.2,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.2,conda-forge/napari-brushsettings/0.0.2,1.0,0.0,2022-02-10 12:24:10.844000+00:00,2023-06-18 08:40:48.994000+00:00,conda,noarch/napari-brushsettings-0.0.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7']",noarch,1644495710442.0,None-any-None,pyhd8ed1ab_0,2022-02-10 12:24:11.075000+00:00,cb040a9151f89bad05399ecd308d4d20,None,8927.0,conda-forge/napari-brushsettings/0.0.2/noarch/napari-brushsettings-0.0.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-brushsettings/0.0.2/noarch/napari-brushsettings-0.0.2-pyhd8ed1ab_0.tar.bz2,conda,0.0.2,conda-forge,['main'],public,,0.2.1,napari-brushsettings.Brushsize,Brushsize,napari_brushsettings._dock_widget:Brushsize,,,,2.1,napari-brushsettings,0.0.2,['UNKNOWN'],A simple plugin to set the brush settings for segmentation in napari,"# napari-brushsettings +",text/markdown,https://github.com/haesleinhuepf/napari-brightness-contrast,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'napari', 'numpy', 'pyqtgraph', 'superqt', 'napari-tools-menu', ""pytest ; extra == 'tests'"", ""pytest-qt ; extra == 'tests'""]",>=3.7,"['Bug Tracker, https://github.com/haesleinhuepf/napari-brightness-contrast/issues', 'Documentation, https://github.com/haesleinhuepf/napari-brightness-contrast#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-brightness-contrast', 'User Support, https://github.com/haesleinhuepf/napari-brightness-contrast/issues']",['tests'],True,0.1.7,conda-forge/napari-brightness-contrast/0.1.7,0.1.8,conda-forge/napari-brightness-contrast/0.1.8,,,conda,noarch/napari-brightness-contrast-0.1.7-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'pyqtgraph', 'python >=3.7', 'superqt']",pyhd8ed1ab_0,1647083370288.0,None-any-None,noarch,2022-03-12 11:11:39.802000+00:00,f041c2fed451240405583dc03c30752c,None,12298.0,conda-forge/napari-brightness-contrast/0.1.7/noarch/napari-brightness-contrast-0.1.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-brightness-contrast/0.1.7/noarch/napari-brightness-contrast-0.1.7-pyhd8ed1ab_0.tar.bz2,conda,0.1.7,conda-forge,['main'],conda,noarch/napari-brightness-contrast-0.1.8-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'pyqtgraph', 'python >=3.7', 'superqt']",noarch,1664125151019.0,None-any-None,pyhd8ed1ab_0,2022-09-25 17:01:43.992000+00:00,6294abe0cc2341546aa68178891fc9f3,None,12563.0,conda-forge/napari-brightness-contrast/0.1.8/noarch/napari-brightness-contrast-0.1.8-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-brightness-contrast/0.1.8/noarch/napari-brightness-contrast-0.1.8-pyhd8ed1ab_0.tar.bz2,conda,0.1.8,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-brightness-contrast.BrightnessContrast,BrightnessContrast,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +122,napari-brushsettings,0.0.2,napari-brushsettings,A simple plugin to set the brush settings for segmentation in napari,Philipp Schoennenbeck,BSD-3-Clause,https://github.com/Croxa/napari-brushsettings,620503ed8d5f58936403a8f8,['conda'],,https://github.com/Croxa/napari-brushsettings,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-brushsettings,http://api.anaconda.org/packages/conda-forge/napari-brushsettings,http://anaconda.org/conda-forge/napari-brushsettings,['0.0.2'],0.0.2,0.0.2,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.2,conda-forge/napari-brushsettings/0.0.2,1.0,0.0,2022-02-10 12:24:10.844000+00:00,2023-06-18 08:40:48.994000+00:00,conda,noarch/napari-brushsettings-0.0.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7']",noarch,1644495710442.0,None-any-None,pyhd8ed1ab_0,2022-02-10 12:24:11.075000+00:00,cb040a9151f89bad05399ecd308d4d20,None,8927.0,conda-forge/napari-brushsettings/0.0.2/noarch/napari-brushsettings-0.0.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-brushsettings/0.0.2/noarch/napari-brushsettings-0.0.2-pyhd8ed1ab_0.tar.bz2,conda,0.0.2,conda-forge,['main'],public,,0.2.1,napari-brushsettings.Brushsize,Brushsize,napari_brushsettings._dock_widget:Brushsize,,,,2.1,napari-brushsettings,0.0.2,['UNKNOWN'],A simple plugin to set the brush settings for segmentation in napari,"# napari-brushsettings [![License](https://img.shields.io/pypi/l/napari-brushsettings.svg?color=green)](https://github.com/Croxa/napari-brushsettings/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-brushsettings.svg?color=green)](https://pypi.org/project/napari-brushsettings) @@ -11924,8 +12694,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/Croxa/napari-brushsettings,Philipp Schoennenbeck,p.schoennenbeck@fz-juelich.de,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy']",>=3.7,"['Bug Tracker, https://github.com/Croxa/napari-brushsettings/issues', 'Documentation, https://github.com/Croxa/napari-brushsettings#README.md', 'Source Code, https://github.com/Croxa/napari-brushsettings', 'User Support, https://github.com/Croxa/napari-brushsettings/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-brushsettings.Brushsize,Brushsize,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -115,napari-bud-cell-segmenter,0.1.4,Bud Cell Segmenter,A plugin to segment embryonic mammary bud cells and detect 2 RNA probes,Aurelien Maillot,BSD-3-Clause,https://github.com/AurelienMaillot/napari-bud-cell-segmenter,655942767cb9f722941b6bab,['conda'],,https://pypi.org/project/napari-bud-cell-segmenter,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-bud-cell-segmenter,http://api.anaconda.org/packages/conda-forge/napari-bud-cell-segmenter,http://anaconda.org/conda-forge/napari-bud-cell-segmenter,['0.1.4'],0.1.4,0.1.4,['noarch'],3.0,https://github.com/AurelienMaillot/napari-bud-cell-segmenter,['pyh9208f05_0'],0.1.4,conda-forge/napari-bud-cell-segmenter/0.1.4,1.0,0.0,2023-11-18 23:02:12.099000+00:00,2023-11-18 23:02:14.713000+00:00,conda,noarch/napari-bud-cell-segmenter-0.1.4-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scipy', 'tifffile']",noarch,1700348354886.0,None-any-None,pyh9208f05_0,2023-11-18 23:02:12.455000+00:00,c57e3b391d6c876c60c34634b08d3510,49453205fa0f2fe3afed684d7e533d4fd79895516fc9408fecab9d2bf90e92cf,23139.0,conda-forge/napari-bud-cell-segmenter/0.1.4/noarch/napari-bud-cell-segmenter-0.1.4-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-bud-cell-segmenter/0.1.4/noarch/napari-bud-cell-segmenter-0.1.4-pyh9208f05_0.conda,conda,0.1.4,conda-forge,['main'],public,,0.2.1,napari-bud-cell-segmenter.get_reader,Open data with Bud Cell Segmenter,napari_bud_cell_segmenter._reader:napari_get_reader,napari-bud-cell-segmenter.get_reader,['*.npy'],False,2.1,napari-bud-cell-segmenter,0.1.4,,A plugin to segment embryonic mammary bud cells and detect 2 RNA probes,"# napari-bud-cell-segmenter +",text/markdown,https://github.com/Croxa/napari-brushsettings,Philipp Schoennenbeck,p.schoennenbeck@fz-juelich.de,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy']",>=3.7,"['Bug Tracker, https://github.com/Croxa/napari-brushsettings/issues', 'Documentation, https://github.com/Croxa/napari-brushsettings#README.md', 'Source Code, https://github.com/Croxa/napari-brushsettings', 'User Support, https://github.com/Croxa/napari-brushsettings/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-brushsettings.Brushsize,Brushsize,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +123,napari-bud-cell-segmenter,0.1.4,Bud Cell Segmenter,A plugin to segment embryonic mammary bud cells and detect 2 RNA probes,Aurelien Maillot,BSD-3-Clause,https://github.com/AurelienMaillot/napari-bud-cell-segmenter,655942767cb9f722941b6bab,['conda'],,https://pypi.org/project/napari-bud-cell-segmenter,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-bud-cell-segmenter,http://api.anaconda.org/packages/conda-forge/napari-bud-cell-segmenter,http://anaconda.org/conda-forge/napari-bud-cell-segmenter,['0.1.4'],0.1.4,0.1.4,['noarch'],3.0,https://github.com/AurelienMaillot/napari-bud-cell-segmenter,['pyh9208f05_0'],0.1.4,conda-forge/napari-bud-cell-segmenter/0.1.4,1.0,0.0,2023-11-18 23:02:12.099000+00:00,2023-11-18 23:02:14.713000+00:00,conda,noarch/napari-bud-cell-segmenter-0.1.4-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scipy', 'tifffile']",noarch,1700348354886.0,None-any-None,pyh9208f05_0,2023-11-18 23:02:12.455000+00:00,c57e3b391d6c876c60c34634b08d3510,49453205fa0f2fe3afed684d7e533d4fd79895516fc9408fecab9d2bf90e92cf,23139.0,conda-forge/napari-bud-cell-segmenter/0.1.4/noarch/napari-bud-cell-segmenter-0.1.4-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-bud-cell-segmenter/0.1.4/noarch/napari-bud-cell-segmenter-0.1.4-pyh9208f05_0.conda,conda,0.1.4,conda-forge,['main'],public,,0.2.1,napari-bud-cell-segmenter.get_reader,Open data with Bud Cell Segmenter,napari_bud_cell_segmenter._reader:napari_get_reader,napari-bud-cell-segmenter.get_reader,['*.npy'],False,2.1,napari-bud-cell-segmenter,0.1.4,,A plugin to segment embryonic mammary bud cells and detect 2 RNA probes,"# napari-bud-cell-segmenter [![License BSD-3](https://img.shields.io/pypi/l/napari-bud-cell-segmenter.svg?color=green)](https://github.com/AurelienMaillot/napari-bud-cell-segmenter/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-bud-cell-segmenter.svg?color=green)](https://pypi.org/project/napari-bud-cell-segmenter) @@ -11992,8 +12762,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/AurelienMaillot/napari-bud-cell-segmenter,Aurelien Maillot,aurelien.maillot@protonmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'pandas', 'scikit-image', 'napari', 'tifffile', 'matplotlib', 'scipy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/AurelienMaillot/napari-bud-cell-segmenter/issues', 'Documentation, https://github.com/AurelienMaillot/napari-bud-cell-segmenter#README.md', 'Source Code, https://github.com/AurelienMaillot/napari-bud-cell-segmenter', 'User Support, https://github.com/AurelienMaillot/napari-bud-cell-segmenter/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-bud-cell-segmenter.write_multiple,Save multi-layer data with Bud Cell Segmenter,napari_bud_cell_segmenter._writer:write_multiple,napari-bud-cell-segmenter.write_single_image,Save image data with Bud Cell Segmenter,napari_bud_cell_segmenter._writer:write_single_image,napari-bud-cell-segmenter.make_sample_data,Load sample data from Bud Cell Segmenter,napari_bud_cell_segmenter._sample_data:make_sample_data,napari-bud-cell-segmenter.load_data,Load Data,False,napari-bud-cell-segmenter.preprocessing,Preprocessing,False,napari-bud-cell-segmenter.segmentation,Segmentation,False,napari-bud-cell-segmenter.manual_corrections,Manual Corrections Widget,False,napari-bud-cell-segmenter.load_data,Make example magic widget,napari_bud_cell_segmenter._widget:load_data,napari-bud-cell-segmenter.write_multiple,"['image*', 'labels*']",,napari-bud-cell-segmenter.write_single_image,['image'],['.npy'],,napari-bud-cell-segmenter.make_sample_data,unique_id.1,Bud Cell Segmenter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-bud-cell-segmenter.preprocessing,Make example QWidget,napari_bud_cell_segmenter._widget:Preprocessing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-bud-cell-segmenter.manual_corrections,Make manual corrections QWidget,napari_bud_cell_segmenter._widget:ManualCorrections,napari-bud-cell-segmenter.segmentation,Make Segmentation widget,napari_bud_cell_segmenter._widget:segmentation,napari-bud-cell-segmenter.detect_blobs,Make Blob detection widget,napari_bud_cell_segmenter._widget:detect_blobs,napari-bud-cell-segmenter.disp_statitics,Make disp statitics widget,napari_bud_cell_segmenter._widget:disp_statitics,napari-bud-cell-segmenter.visualization,Make visualization widget,napari_bud_cell_segmenter._widget:visualization,napari-bud-cell-segmenter.export_data,Make export data widget,napari_bud_cell_segmenter._widget:export_data,,napari-bud-cell-segmenter.detect_blobs,Blob detection,False,napari-bud-cell-segmenter.disp_statitics,Statistics,False,napari-bud-cell-segmenter.visualization,Visualization,False,napari-bud-cell-segmenter.export_data,Export Data,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -116,napari-buds,0.1.6,napari BudAnnotation,Random-forest automated bud annotation,Sander van Otterdijk,BSD-3-Clause,https://github.com/SanderSMFISH/napari-buds,6435e79f3639b3445e5cbd19,['conda'],,https://github.com/SanderSMFISH/napari-buds,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-buds,http://api.anaconda.org/packages/conda-forge/napari-buds,http://anaconda.org/conda-forge/napari-buds,"['0.0.1', '0.1.6']",0.1.6,0.1.6,['noarch'],4.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-buds/0.0.1,1.0,0.0,2023-04-11 23:05:00.714000+00:00,2023-06-18 17:27:59.790000+00:00,conda,noarch/napari-buds-0.0.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy']",noarch,1681254157143.0,None-any-None,pyhd8ed1ab_0,2023-04-11 23:05:01.237000+00:00,54428e98800c090c430d4de4ace98e5b,9ca4d45b9e8dbef879431d06bc2fcec6f4e1d5bc48804947c987c2dd3ad816a9,14007.0,conda-forge/napari-buds/0.0.1/noarch/napari-buds-0.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-buds/0.0.1/noarch/napari-buds-0.0.1-pyhd8ed1ab_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-buds.get_reader,Open data with napari BudAnnotation,napari_buds._reader:napari_get_reader,napari-buds.get_reader,['*.npy'],False,2.1,napari-buds,0.1.6,,Random-forest automated bud annotation,"# napari-buds +",text/markdown,https://github.com/AurelienMaillot/napari-bud-cell-segmenter,Aurelien Maillot,aurelien.maillot@protonmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'pandas', 'scikit-image', 'napari', 'tifffile', 'matplotlib', 'scipy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/AurelienMaillot/napari-bud-cell-segmenter/issues', 'Documentation, https://github.com/AurelienMaillot/napari-bud-cell-segmenter#README.md', 'Source Code, https://github.com/AurelienMaillot/napari-bud-cell-segmenter', 'User Support, https://github.com/AurelienMaillot/napari-bud-cell-segmenter/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-bud-cell-segmenter.write_multiple,Save multi-layer data with Bud Cell Segmenter,napari_bud_cell_segmenter._writer:write_multiple,napari-bud-cell-segmenter.write_single_image,Save image data with Bud Cell Segmenter,napari_bud_cell_segmenter._writer:write_single_image,napari-bud-cell-segmenter.make_sample_data,Load sample data from Bud Cell Segmenter,napari_bud_cell_segmenter._sample_data:make_sample_data,napari-bud-cell-segmenter.load_data,Load Data,False,napari-bud-cell-segmenter.preprocessing,Preprocessing,False,napari-bud-cell-segmenter.segmentation,Segmentation,False,napari-bud-cell-segmenter.manual_corrections,Manual Corrections Widget,False,napari-bud-cell-segmenter.load_data,Make example magic widget,napari_bud_cell_segmenter._widget:load_data,napari-bud-cell-segmenter.write_multiple,"['image*', 'labels*']",,napari-bud-cell-segmenter.write_single_image,['image'],['.npy'],,napari-bud-cell-segmenter.make_sample_data,unique_id.1,Bud Cell Segmenter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-bud-cell-segmenter.preprocessing,Make example QWidget,napari_bud_cell_segmenter._widget:Preprocessing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-bud-cell-segmenter.manual_corrections,Make manual corrections QWidget,napari_bud_cell_segmenter._widget:ManualCorrections,napari-bud-cell-segmenter.segmentation,Make Segmentation widget,napari_bud_cell_segmenter._widget:segmentation,napari-bud-cell-segmenter.detect_blobs,Make Blob detection widget,napari_bud_cell_segmenter._widget:detect_blobs,napari-bud-cell-segmenter.disp_statitics,Make disp statitics widget,napari_bud_cell_segmenter._widget:disp_statitics,napari-bud-cell-segmenter.visualization,Make visualization widget,napari_bud_cell_segmenter._widget:visualization,,napari-bud-cell-segmenter.detect_blobs,Blob detection,False,napari-bud-cell-segmenter.disp_statitics,Statistics,False,napari-bud-cell-segmenter.visualization,Visualization,False,napari-bud-cell-segmenter.export_data,Export Data,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +124,napari-buds,0.1.6,napari BudAnnotation,Random-forest automated bud annotation,Sander van Otterdijk,BSD-3-Clause,https://github.com/SanderSMFISH/napari-buds,6435e79f3639b3445e5cbd19,['conda'],,https://github.com/SanderSMFISH/napari-buds,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-buds,http://api.anaconda.org/packages/conda-forge/napari-buds,http://anaconda.org/conda-forge/napari-buds,"['0.0.1', '0.1.6']",0.1.6,0.1.6,['noarch'],4.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-buds/0.0.1,1.0,0.0,2023-04-11 23:05:00.714000+00:00,2023-06-18 17:27:59.790000+00:00,conda,noarch/napari-buds-0.0.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy']",noarch,1681254157143.0,None-any-None,pyhd8ed1ab_0,2023-04-11 23:05:01.237000+00:00,54428e98800c090c430d4de4ace98e5b,9ca4d45b9e8dbef879431d06bc2fcec6f4e1d5bc48804947c987c2dd3ad816a9,14007.0,conda-forge/napari-buds/0.0.1/noarch/napari-buds-0.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-buds/0.0.1/noarch/napari-buds-0.0.1-pyhd8ed1ab_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-buds.get_reader,Open data with napari BudAnnotation,napari_buds._reader:napari_get_reader,napari-buds.get_reader,['*.npy'],False,2.1,napari-buds,0.1.6,,Random-forest automated bud annotation,"# napari-buds [![License BSD-3](https://img.shields.io/pypi/l/napari-buds.svg?color=green)](https://github.com/SanderSMFISH/napari-buds/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-buds.svg?color=green)](https://pypi.org/project/napari-buds) @@ -12123,8 +12893,8 @@ In these cases, it might help to adjust in your display setting the display scal ## References 1. Arganda-Carreras, I., Kaynig, V., Rueden, C., Eliceiri, K. W., Schindelin, J., Cardona, A., & Sebastian Seung, H. (2017). Trainable Weka Segmentation: a machine learning tool for microscopy pixel classification. Bioinformatics, 33(15), 2424–2426. doi:10.1093/bioinformatics/btx180 -",text/markdown,https://github.com/SanderSMFISH/napari-buds,Sander van Otterdijk,scvanotterdijk@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'pandas', 'napari', 'magic-class', 'scipy', 'scikit-learn', 'scikit-image', 'matplotlib', 'joblib', 'imageio-ffmpeg', 'stackview', 'jupyterlab', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/SanderSMFISH/napari-buds/issues', 'Documentation, https://github.com/SanderSMFISH/napari-buds#README.md', 'Source Code, https://github.com/SanderSMFISH/napari-buds', 'User Support, https://github.com/SanderSMFISH/napari-buds/issues']",['testing'],False,0.1.6,conda-forge/napari-buds/0.1.6,,,,,conda,noarch/napari-buds-0.1.6-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['imageio-ffmpeg', 'joblib', 'jupyterlab', 'magic-class', 'magicgui', 'matplotlib-base', 'napari', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scikit-learn', 'scipy', 'stackview']",pyhd8ed1ab_0,1682325854080.0,None-any-None,noarch,2023-04-24 08:47:15.439000+00:00,fe492dd22f68b53889022b25910d8956,005cd90fe4fbdf27469153bbf82bce9856d2a055b533578ff6579a68babb71a7,25636.0,conda-forge/napari-buds/0.1.6/noarch/napari-buds-0.1.6-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-buds/0.1.6/noarch/napari-buds-0.1.6-pyhd8ed1ab_0.conda,conda,0.1.6,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-buds.write_multiple,Save multi-layer data with napari BudAnnotation,napari_buds._writer:write_multiple,napari-buds.write_single_image,Save image data with napari BudAnnotation,napari_buds._writer:write_single_image,napari-buds.make_sample_data,Load sample data from napari BudAnnotation,napari_buds._sample_data:make_sample_data,napari-buds.translate,"Translate image layers (controls ASWD, T = register)",False,napari-buds.redecorated,bud annotation,False,,,,,,,napari-buds.translate,translate image layer,napari_buds._translate:translate,napari-buds.write_multiple,"['image*', 'labels*']",,napari-buds.write_single_image,['image'],['.npy'],,napari-buds.make_sample_data,unique_id.1,napari BudAnnotation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-buds.testing,Napari bud annotation,napari_buds._widget:Main,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-buds.redecorated,Napari bud annotation redecorated,napari_buds._widget_overview:UIWidget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -117,napari-calibration,0.0.14,napari Calibration,Plug in which enables to make camera calibration,Tristan Cotte,BSD-3-Clause,https://github.com/tcotte/napari-calibration,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-calibration.ImageForm,Open data with napari Calibration,napari_calibration.Image_widget:ImageForm,,,,2.1,napari-calibration,0.0.14,,Plug in which enables to make camera calibration,"# napari-calibration +",text/markdown,https://github.com/SanderSMFISH/napari-buds,Sander van Otterdijk,scvanotterdijk@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'pandas', 'napari', 'magic-class', 'scipy', 'scikit-learn', 'scikit-image', 'matplotlib', 'joblib', 'imageio-ffmpeg', 'stackview', 'jupyterlab', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/SanderSMFISH/napari-buds/issues', 'Documentation, https://github.com/SanderSMFISH/napari-buds#README.md', 'Source Code, https://github.com/SanderSMFISH/napari-buds', 'User Support, https://github.com/SanderSMFISH/napari-buds/issues']",['testing'],False,0.1.6,conda-forge/napari-buds/0.1.6,,,,,conda,noarch/napari-buds-0.1.6-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['imageio-ffmpeg', 'joblib', 'jupyterlab', 'magic-class', 'magicgui', 'matplotlib-base', 'napari', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scikit-learn', 'scipy', 'stackview']",pyhd8ed1ab_0,1682325854080.0,None-any-None,noarch,2023-04-24 08:47:15.439000+00:00,fe492dd22f68b53889022b25910d8956,005cd90fe4fbdf27469153bbf82bce9856d2a055b533578ff6579a68babb71a7,25636.0,conda-forge/napari-buds/0.1.6/noarch/napari-buds-0.1.6-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-buds/0.1.6/noarch/napari-buds-0.1.6-pyhd8ed1ab_0.conda,conda,0.1.6,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-buds.write_multiple,Save multi-layer data with napari BudAnnotation,napari_buds._writer:write_multiple,napari-buds.write_single_image,Save image data with napari BudAnnotation,napari_buds._writer:write_single_image,napari-buds.make_sample_data,Load sample data from napari BudAnnotation,napari_buds._sample_data:make_sample_data,napari-buds.translate,"Translate image layers (controls ASWD, T = register)",False,napari-buds.redecorated,bud annotation,False,,,,,,,napari-buds.translate,translate image layer,napari_buds._translate:translate,napari-buds.write_multiple,"['image*', 'labels*']",,napari-buds.write_single_image,['image'],['.npy'],,napari-buds.make_sample_data,unique_id.1,napari BudAnnotation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-buds.testing,Napari bud annotation,napari_buds._widget:Main,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-buds.redecorated,Napari bud annotation redecorated,napari_buds._widget_overview:UIWidget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +125,napari-calibration,0.0.14,napari Calibration,Plug in which enables to make camera calibration,Tristan Cotte,BSD-3-Clause,https://github.com/tcotte/napari-calibration,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-calibration.ImageForm,Open data with napari Calibration,napari_calibration.Image_widget:ImageForm,,,,2.1,napari-calibration,0.0.14,,Plug in which enables to make camera calibration,"# napari-calibration [![License](https://img.shields.io/pypi/l/napari-calibration.svg?color=green)](https://github.com/tcotte/napari-calibration/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-calibration.svg?color=green)](https://pypi.org/project/napari-calibration) @@ -12191,8 +12961,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/tcotte/napari-calibration,Tristan Cotte,tristan.cotte@sgs.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari', 'numpy', 'qt-material', 'opencv-python']",>=3.7,"['Bug Tracker, https://github.com/tcotte/napari-calibration/issues', 'Documentation, https://github.com/tcotte/napari-calibration#README.md', 'Source Code, https://github.com/tcotte/napari-calibration', 'User Support, https://github.com/tcotte/napari-calibration/issues']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-calibration.CalibrationForm,Calibrate camera with napari,napari_calibration.calibration_widget:CalibrationForm,napari-calibration.say_hi,"Say hello, world!",napari_hello:show_hello_message,,,,napari-calibration.ImageForm,Get picture widget,False,napari-calibration.CalibrationForm,Calibration widget,False,napari-calibration.say_hi,Hello World,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -118,napari-caphid,0.0.1,CAphid,Annotation of aphid and update table,Herearii Metuarea,BSD-3-Clause,https://github.com/hereariim/napari-caphid,653e9a87f2766fb3e47b2a03,['conda'],,https://pypi.org/project/napari-caphid,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-caphid,http://api.anaconda.org/packages/conda-forge/napari-caphid,http://anaconda.org/conda-forge/napari-caphid,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,https://github.com/hereariim/napari-caphid,['pyh9208f05_0'],0.0.1,conda-forge/napari-caphid/0.0.1,1.0,0.0,2023-10-29 17:46:44.912000+00:00,2023-10-29 17:46:47.977000+00:00,conda,noarch/napari-caphid-0.0.1-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'opencv', 'pandas', 'pillow', 'python >=3.8,<3.11', 'qtpy', 'scikit-image', 'tqdm']",noarch,1698601444401.0,None-any-None,pyh9208f05_0,2023-10-29 17:46:45.533000+00:00,f110bc4f35e3f382bb47558e5c039803,fa51e629d9d0d41a515d7e7276b2c1f5ee19e9ec812242aab3b2aed8371dbaa4,16361.0,conda-forge/napari-caphid/0.0.1/noarch/napari-caphid-0.0.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-caphid/0.0.1/noarch/napari-caphid-0.0.1-pyh9208f05_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-caphid.get_reader,Open data with CAphid,napari_caphid._reader:napari_get_reader,napari-caphid.get_reader,['*.npy'],False,2.1,napari-caphid,0.0.1,,Annotation of aphid and update table,"# napari-caphid +",text/markdown,https://github.com/tcotte/napari-calibration,Tristan Cotte,tristan.cotte@sgs.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari', 'numpy', 'qt-material', 'opencv-python']",>=3.7,"['Bug Tracker, https://github.com/tcotte/napari-calibration/issues', 'Documentation, https://github.com/tcotte/napari-calibration#README.md', 'Source Code, https://github.com/tcotte/napari-calibration', 'User Support, https://github.com/tcotte/napari-calibration/issues']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-calibration.CalibrationForm,Calibrate camera with napari,napari_calibration.calibration_widget:CalibrationForm,napari-calibration.say_hi,"Say hello, world!",napari_hello:show_hello_message,,,,napari-calibration.ImageForm,Get picture widget,False,napari-calibration.CalibrationForm,Calibration widget,False,napari-calibration.say_hi,Hello World,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +126,napari-caphid,0.0.1,CAphid,Annotation of aphid and update table,Herearii Metuarea,BSD-3-Clause,https://github.com/hereariim/napari-caphid,653e9a87f2766fb3e47b2a03,['conda'],,https://pypi.org/project/napari-caphid,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-caphid,http://api.anaconda.org/packages/conda-forge/napari-caphid,http://anaconda.org/conda-forge/napari-caphid,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,https://github.com/hereariim/napari-caphid,['pyh9208f05_0'],0.0.1,conda-forge/napari-caphid/0.0.1,1.0,0.0,2023-10-29 17:46:44.912000+00:00,2023-10-29 17:46:47.977000+00:00,conda,noarch/napari-caphid-0.0.1-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'opencv', 'pandas', 'pillow', 'python >=3.8,<3.11', 'qtpy', 'scikit-image', 'tqdm']",noarch,1698601444401.0,None-any-None,pyh9208f05_0,2023-10-29 17:46:45.533000+00:00,f110bc4f35e3f382bb47558e5c039803,fa51e629d9d0d41a515d7e7276b2c1f5ee19e9ec812242aab3b2aed8371dbaa4,16361.0,conda-forge/napari-caphid/0.0.1/noarch/napari-caphid-0.0.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-caphid/0.0.1/noarch/napari-caphid-0.0.1-pyh9208f05_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-caphid.get_reader,Open data with CAphid,napari_caphid._reader:napari_get_reader,napari-caphid.get_reader,['*.npy'],False,2.1,napari-caphid,0.0.1,,Annotation of aphid and update table,"# napari-caphid [![License BSD-3](https://img.shields.io/pypi/l/napari-caphid.svg?color=green)](https://github.com/hereariim/napari-caphid/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-caphid.svg?color=green)](https://pypi.org/project/napari-caphid) @@ -12321,8 +13091,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/hereariim/napari-caphid,Herearii Metuarea,herearii.metuarea@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'opencv-python', 'tqdm', 'pandas', 'Pillow', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/hereariim/napari-caphid/issues', 'Documentation, https://github.com/hereariim/napari-caphid#README.md', 'Source Code, https://github.com/hereariim/napari-caphid', 'User Support, https://github.com/hereariim/napari-caphid/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-caphid.write_multiple,Save multi-layer data with CAphid,napari_caphid._writer:write_multiple,napari-caphid.write_single_image,Save image data with CAphid,napari_caphid._writer:write_single_image,napari-caphid.make_process_func,Update table,napari_caphid._widget:process_func,napari-caphid.make_process_func,Update table,False,,,,,,,,,,,,,napari-caphid.write_multiple,"['image*', 'labels*']",,napari-caphid.write_single_image,['image'],['.npy'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -119,napari-cardio-bio-eval,0.1.5,Cardio Biosensor Evaluation,The evaluation of the epic cardio biosensor integrated into napari,Nanobiosensorics," +",text/markdown,https://github.com/hereariim/napari-caphid,Herearii Metuarea,herearii.metuarea@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'opencv-python', 'tqdm', 'pandas', 'Pillow', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/hereariim/napari-caphid/issues', 'Documentation, https://github.com/hereariim/napari-caphid#README.md', 'Source Code, https://github.com/hereariim/napari-caphid', 'User Support, https://github.com/hereariim/napari-caphid/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-caphid.write_multiple,Save multi-layer data with CAphid,napari_caphid._writer:write_multiple,napari-caphid.write_single_image,Save image data with CAphid,napari_caphid._writer:write_single_image,napari-caphid.make_process_func,Update table,napari_caphid._widget:process_func,napari-caphid.make_process_func,Update table,False,,,,,,,,,,,,,napari-caphid.write_multiple,"['image*', 'labels*']",,napari-caphid.write_single_image,['image'],['.npy'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +127,napari-cardio-bio-eval,0.1.5,Cardio Biosensor Evaluation,The evaluation of the epic cardio biosensor integrated into napari,Nanobiosensorics," Copyright (c) 2024, Nanobiosensorics All rights reserved. @@ -12525,8 +13295,8 @@ SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. -","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['matplotlib', 'opencv-python-headless', 'openpyxl', 'napari[pyqt5]', 'torch', 'numpy==1.26', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.10,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation']",napari-cardio-bio-eval.cardio_bio_segmentation_widget,Biosensor segmentation widget,napari_cardio_bio_eval:SegmentationWidget,,,,,,,napari-cardio-bio-eval.cardio_bio_peak_detection_widget,Cardio Bio Peak Detection Widget,False,napari-cardio-bio-eval.cardio_bio_segmentation_widget,Cardio Bio Segmentation Widget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -120,napari-ccp4map,1.0,napari-ccp4map,Enables napari to read .map files in the ccp4 format. Drag&Drop or press Ctrl+O to read files.,Simon Biberger,BSD-3-Clause,https://github.com/biberger/napari-ccp4map,61f8591c27bdd9a91c8bc7d8,['conda'],,https://github.com/biberger/napari-ccp4map,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-ccp4map,http://api.anaconda.org/packages/conda-forge/napari-ccp4map,http://anaconda.org/conda-forge/napari-ccp4map,['1.0'],1.0,1.0,['noarch'],3.0,,['pyhd8ed1ab_0'],1.0,conda-forge/napari-ccp4map/1.0,1.0,0.0,2022-01-31 21:48:07.480000+00:00,2023-06-18 08:40:40.587000+00:00,conda,noarch/napari-ccp4map-1.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['gemmi', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7']",noarch,1643665651903.0,None-any-None,pyhd8ed1ab_0,2022-01-31 21:48:09.872000+00:00,c2b46a45b19f9bf29ea796df36f0d70f,None,8826.0,conda-forge/napari-ccp4map/1.0/noarch/napari-ccp4map-1.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-ccp4map/1.0/noarch/napari-ccp4map-1.0-pyhd8ed1ab_0.tar.bz2,conda,1.0,conda-forge,['main'],public,,0.2.1,napari-ccp4map.napari_get_reader,napari_get_reader,napari_ccp4map._reader:napari_get_reader,napari-ccp4map.napari_get_reader,['*'],True,2.1,napari-ccp4map,1.0,['UNKNOWN'],Enables napari to read .map files in the ccp4 format. Drag&Drop or press Ctrl+O to read files.,"# napari-ccp4map +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['matplotlib', 'opencv-python-headless', 'openpyxl', 'napari[pyqt5]', 'torch', 'numpy==1.26', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.10,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation']",napari-cardio-bio-eval.cardio_bio_segmentation_widget,Biosensor segmentation widget,napari_cardio_bio_eval:SegmentationWidget,,,,,,,napari-cardio-bio-eval.cardio_bio_peak_detection_widget,Cardio Bio Peak Detection Widget,False,napari-cardio-bio-eval.cardio_bio_segmentation_widget,Cardio Bio Segmentation Widget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +128,napari-ccp4map,1.0,napari-ccp4map,Enables napari to read .map files in the ccp4 format. Drag&Drop or press Ctrl+O to read files.,Simon Biberger,BSD-3-Clause,https://github.com/biberger/napari-ccp4map,61f8591c27bdd9a91c8bc7d8,['conda'],,https://github.com/biberger/napari-ccp4map,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-ccp4map,http://api.anaconda.org/packages/conda-forge/napari-ccp4map,http://anaconda.org/conda-forge/napari-ccp4map,['1.0'],1.0,1.0,['noarch'],3.0,,['pyhd8ed1ab_0'],1.0,conda-forge/napari-ccp4map/1.0,1.0,0.0,2022-01-31 21:48:07.480000+00:00,2023-06-18 08:40:40.587000+00:00,conda,noarch/napari-ccp4map-1.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['gemmi', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7']",noarch,1643665651903.0,None-any-None,pyhd8ed1ab_0,2022-01-31 21:48:09.872000+00:00,c2b46a45b19f9bf29ea796df36f0d70f,None,8826.0,conda-forge/napari-ccp4map/1.0/noarch/napari-ccp4map-1.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-ccp4map/1.0/noarch/napari-ccp4map-1.0-pyhd8ed1ab_0.tar.bz2,conda,1.0,conda-forge,['main'],public,,0.2.1,napari-ccp4map.napari_get_reader,napari_get_reader,napari_ccp4map._reader:napari_get_reader,napari-ccp4map.napari_get_reader,['*'],True,2.1,napari-ccp4map,1.0,['UNKNOWN'],Enables napari to read .map files in the ccp4 format. Drag&Drop or press Ctrl+O to read files.,"# napari-ccp4map [![License](https://img.shields.io/pypi/l/napari-ccp4map.svg?color=green)](https://github.com/biberger/napari-ccp4map/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-ccp4map.svg?color=green)](https://pypi.org/project/napari-ccp4map) @@ -12594,8 +13364,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/biberger/napari-ccp4map,Simon Biberger,dev@biberger.xyz,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'gemmi']",>=3.7,"['Bug Tracker, https://github.com/biberger/napari-ccp4map/issues', 'Documentation, https://github.com/biberger/napari-ccp4map#README.md', 'Source Code, https://github.com/biberger/napari-ccp4map', 'User Support, https://github.com/biberger/napari-ccp4map/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -121,napari-cell-centroid-annotator,0.0.1,3D cell centroid annotator,A simple plugin to annotate cell centroids in 3D images,Tim Van De Looverbosch,MIT,https://github.com/tim-vdl/napari-cell-centroid-annotator,6435fd06f844c85bddda6cde,['conda'],,https://github.com/tim-vdl/napari-cell-centroid-annotator,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-cell-centroid-annotator,http://api.anaconda.org/packages/conda-forge/napari-cell-centroid-annotator,http://anaconda.org/conda-forge/napari-cell-centroid-annotator,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-cell-centroid-annotator/0.0.1,1.0,0.0,2023-04-12 00:36:19.242000+00:00,2023-06-18 17:27:59.845000+00:00,conda,noarch/napari-cell-centroid-annotator-0.0.1-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['magicgui', 'napari', 'napari-layer-table', 'napari-plugin-engine', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'tifffile']",noarch,1681259615525.0,None-any-None,pyhd8ed1ab_0,2023-04-12 00:36:19.775000+00:00,66642e46aea3a4560c31beb42164a953,7baaa3c98f1107fe5b139fb6c401ae824d6ef1493a29e406c6454df791cc4287,12941.0,conda-forge/napari-cell-centroid-annotator/0.0.1/noarch/napari-cell-centroid-annotator-0.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-cell-centroid-annotator/0.0.1/noarch/napari-cell-centroid-annotator-0.0.1-pyhd8ed1ab_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-cell-centroid-annotator.get_reader,Open image and points data with 3D cell centroid annotator,napari_cell_centroid_annotator._reader:napari_get_reader,napari-cell-centroid-annotator.get_reader,"['*.tif', '*.tiff', '*.csv', '*.npy']",False,2.1,napari-cell-centroid-annotator,0.0.1,,A simple plugin to annotate cell centroids in 3D images,"# napari-cell-centroid-annotator +",text/markdown,https://github.com/biberger/napari-ccp4map,Simon Biberger,dev@biberger.xyz,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'gemmi']",>=3.7,"['Bug Tracker, https://github.com/biberger/napari-ccp4map/issues', 'Documentation, https://github.com/biberger/napari-ccp4map#README.md', 'Source Code, https://github.com/biberger/napari-ccp4map', 'User Support, https://github.com/biberger/napari-ccp4map/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +129,napari-cell-centroid-annotator,0.0.1,3D cell centroid annotator,A simple plugin to annotate cell centroids in 3D images,Tim Van De Looverbosch,MIT,https://github.com/tim-vdl/napari-cell-centroid-annotator,6435fd06f844c85bddda6cde,['conda'],,https://github.com/tim-vdl/napari-cell-centroid-annotator,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-cell-centroid-annotator,http://api.anaconda.org/packages/conda-forge/napari-cell-centroid-annotator,http://anaconda.org/conda-forge/napari-cell-centroid-annotator,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-cell-centroid-annotator/0.0.1,1.0,0.0,2023-04-12 00:36:19.242000+00:00,2023-06-18 17:27:59.845000+00:00,conda,noarch/napari-cell-centroid-annotator-0.0.1-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['magicgui', 'napari', 'napari-layer-table', 'napari-plugin-engine', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'tifffile']",noarch,1681259615525.0,None-any-None,pyhd8ed1ab_0,2023-04-12 00:36:19.775000+00:00,66642e46aea3a4560c31beb42164a953,7baaa3c98f1107fe5b139fb6c401ae824d6ef1493a29e406c6454df791cc4287,12941.0,conda-forge/napari-cell-centroid-annotator/0.0.1/noarch/napari-cell-centroid-annotator-0.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-cell-centroid-annotator/0.0.1/noarch/napari-cell-centroid-annotator-0.0.1-pyhd8ed1ab_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-cell-centroid-annotator.get_reader,Open image and points data with 3D cell centroid annotator,napari_cell_centroid_annotator._reader:napari_get_reader,napari-cell-centroid-annotator.get_reader,"['*.tif', '*.tiff', '*.csv', '*.npy']",False,2.1,napari-cell-centroid-annotator,0.0.1,,A simple plugin to annotate cell centroids in 3D images,"# napari-cell-centroid-annotator [![License MIT](https://img.shields.io/pypi/l/napari-cell-centroid-annotator.svg?color=green)](https://github.com/tim-vdl/napari-cell-centroid-annotator/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-cell-centroid-annotator.svg?color=green)](https://pypi.org/project/napari-cell-centroid-annotator) @@ -12662,8 +13432,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/tim-vdl/napari-cell-centroid-annotator,Tim Van De Looverbosch,tim.vandelooverbosch@gmail.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'pandas', 'tifffile', 'pathlib', 'napari', 'napari-plugin-engine', 'napari-layer-table', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/tim-vdl/napari-cell-centroid-annotator/issues', 'Documentation, https://github.com/tim-vdl/napari-cell-centroid-annotator#README.md', 'Source Code, https://github.com/tim-vdl/napari-cell-centroid-annotator', 'User Support, https://github.com/tim-vdl/napari-cell-centroid-annotator/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-cell-centroid-annotator.make_annotate_centroids_widget,Make centroid annotation widget,napari_cell_centroid_annotator._widget:annotate_centroids_widget,,,,,,,napari-cell-centroid-annotator.make_annotate_centroids_widget,Centroid Annotation Widget,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -122,napari-chatgpt,2024.8.31,napari-chatgpt | Omega,A napari plugin to process and analyse images with chatGPT.,Loic A. Royer and contributors,BSD-3-Clause,https://github.com/royerlab/napari-chatgpt,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-chatgpt.start_omega,Start Omega,napari_chatgpt._widget:OmegaQWidget,,,,2.1,napari-chatgpt,2024.8.31,,A napari plugin to process and analyse images with chatGPT.,"## Home of _Omega_, a napari-aware autonomous LLM-based agent specialized in image processing and analysis. +",text/markdown,https://github.com/tim-vdl/napari-cell-centroid-annotator,Tim Van De Looverbosch,tim.vandelooverbosch@gmail.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'pandas', 'tifffile', 'pathlib', 'napari', 'napari-plugin-engine', 'napari-layer-table', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/tim-vdl/napari-cell-centroid-annotator/issues', 'Documentation, https://github.com/tim-vdl/napari-cell-centroid-annotator#README.md', 'Source Code, https://github.com/tim-vdl/napari-cell-centroid-annotator', 'User Support, https://github.com/tim-vdl/napari-cell-centroid-annotator/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-cell-centroid-annotator.make_annotate_centroids_widget,Make centroid annotation widget,napari_cell_centroid_annotator._widget:annotate_centroids_widget,,,,,,,napari-cell-centroid-annotator.make_annotate_centroids_widget,Centroid Annotation Widget,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +130,napari-chatgpt,2024.10.18.1,napari-chatgpt | Omega,A napari plugin to process and analyse images with chatGPT.,Loic A. Royer and contributors,BSD-3-Clause,https://github.com/royerlab/napari-chatgpt,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-chatgpt.start_omega,Start Omega,napari_chatgpt._widget:OmegaQWidget,,,,2.1,napari-chatgpt,2024.10.18.1,,A napari plugin to process and analyse images with chatGPT.,"## Home of _Omega_, a napari-aware autonomous LLM-based agent specialized in image processing and analysis. [![License BSD-3](https://img.shields.io/pypi/l/napari-chatgpt.svg?color=green)](https://github.com/royerlab/napari-chatgpt/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-chatgpt.svg?color=green)](https://pypi.org/project/napari-chatgpt) @@ -12877,8 +13647,8 @@ description. [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/royerlab/napari-chatgpt,Loic A. Royer and contributors,royerloic@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'scikit-image', 'qtpy', 'QtAwesome', 'langchain==0.2.15', 'langchain-community==0.2.14', 'langchain-openai==0.1.23', 'langchain-anthropic==0.1.23', 'openai==1.42.0', 'anthropic==0.34.1', 'fastapi', 'uvicorn', 'websockets', 'tiktoken', 'wikipedia', 'lxml', 'gTTS', 'playsound', 'matplotlib', 'xarray', 'arbol', 'playwright', 'duckduckgo-search==6.2.11', 'ome-zarr', 'transformers', 'cryptography', 'tabulate', 'numba', 'imageio[ffmpeg,pyav]', 'notebook', 'nbformat', 'jedi', 'black', 'lxml-html-clean', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.9,"['Bug Tracker, https://github.com/royerlab/napari-chatgpt/issues', 'Documentation, https://github.com/royerlab/napari-chatgpt#README.md', 'Source Code, https://github.com/royerlab/napari-chatgpt', 'User Support, https://github.com/royerlab/napari-chatgpt/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-chatgpt.start_omega,Omega -- a ChatGPT-enabled agent,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -123,napari-checkerboard,0.0.3,napari-checkerboard,Compare two images with the itk checkerboard filter,Viktor van der Valk,Apache Software License 2.0,https://github.com/ViktorvdValk/napari-checkerboard,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-checkerboard.checkerboard,checkerboard,checkerboard.checkerboard:checkerboard,,,,2.1,napari-checkerboard,0.0.3,['UNKNOWN'],Compare two images with the itk checkerboard filter,"# napari-checkerboard +",text/markdown,https://github.com/royerlab/napari-chatgpt,Loic A. Royer and contributors,royerloic@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'scikit-image', 'qtpy', 'QtAwesome', 'langchain==0.2.15', 'langchain-community==0.2.14', 'langchain-openai==0.1.23', 'langchain-anthropic==0.1.23', 'openai==1.42.0', 'anthropic==0.34.1', 'fastapi', 'uvicorn', 'websockets', 'tiktoken', 'wikipedia', 'lxml', 'gTTS', 'playsound', 'matplotlib', 'xarray', 'arbol', 'playwright', 'duckduckgo-search==6.3.2', 'ome-zarr', 'transformers', 'cryptography', 'tabulate', 'numba', 'imageio[ffmpeg,pyav]', 'notebook', 'nbformat', 'jedi', 'black', 'lxml-html-clean', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.9,"['Bug Tracker, https://github.com/royerlab/napari-chatgpt/issues', 'Documentation, https://github.com/royerlab/napari-chatgpt#README.md', 'Source Code, https://github.com/royerlab/napari-chatgpt', 'User Support, https://github.com/royerlab/napari-chatgpt/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-chatgpt.start_omega,Omega -- a ChatGPT-enabled agent,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +131,napari-checkerboard,0.0.3,napari-checkerboard,Compare two images with the itk checkerboard filter,Viktor van der Valk,Apache Software License 2.0,https://github.com/ViktorvdValk/napari-checkerboard,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-checkerboard.checkerboard,checkerboard,checkerboard.checkerboard:checkerboard,,,,2.1,napari-checkerboard,0.0.3,['UNKNOWN'],Compare two images with the itk checkerboard filter,"# napari-checkerboard [![License](https://img.shields.io/pypi/l/napari-checkerboard.svg?color=green)](https://github.com/ViktorvdValk/napari-checkerboard/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-checkerboard.svg?color=green)](https://pypi.org/project/napari-checkerboard) @@ -12941,8 +13711,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/ViktorvdValk/napari-checkerboard,Viktor van der Valk,v.o.van_der_valk@lumc.nl,Apache Software License 2.0,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: Apache Software License']","['napari-plugin-engine (>=0.1.4)', 'numpy (>=1.19.0)', 'napari (>=0.4.6)', 'magicgui (>=0.2.6)', 'itk-elastix (>=0.11.1)', 'itk-napari-conversion (>=0.3.1)', 'napari-itk-io (>=0.1.0)']",>=3.6,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-checkerboard.checkerboard,checkerboard,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -124,napari-clemreg,0.2.0,napari-clemreg,A plugin for registering multimodal image volumes based on common segmented structures of interest with point-clouds.,Daniel Krentzel,MIT,https://github.com/krentzd/napari-clemreg,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.1.0,napari-clemreg.make_run_registration,Run registration,napari_clemreg.widgets.run_registration:make_run_registration,napari-clemreg.get_reader,"['*.tif', '*.tiff']",True,2.1,napari-clemreg,0.2.0,,A plugin for registering multimodal image volumes based on common segmented structures of interest with point-clouds.,"# napari-clemrerg +",text/markdown,https://github.com/ViktorvdValk/napari-checkerboard,Viktor van der Valk,v.o.van_der_valk@lumc.nl,Apache Software License 2.0,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: Apache Software License']","['napari-plugin-engine (>=0.1.4)', 'numpy (>=1.19.0)', 'napari (>=0.4.6)', 'magicgui (>=0.2.6)', 'itk-elastix (>=0.11.1)', 'itk-napari-conversion (>=0.3.1)', 'napari-itk-io (>=0.1.0)']",>=3.6,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-checkerboard.checkerboard,checkerboard,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +132,napari-clemreg,0.2.0,napari-clemreg,A plugin for registering multimodal image volumes based on common segmented structures of interest with point-clouds.,Daniel Krentzel,MIT,https://github.com/krentzd/napari-clemreg,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.1.0,napari-clemreg.make_run_registration,Run registration,napari_clemreg.widgets.run_registration:make_run_registration,napari-clemreg.get_reader,"['*.tif', '*.tiff']",True,2.1,napari-clemreg,0.2.0,,A plugin for registering multimodal image volumes based on common segmented structures of interest with point-clouds.,"# napari-clemrerg ### An automated point cloud based registration algorithm for correlative light and volume electron microscopy [![License](https://img.shields.io/pypi/l/napari-clemreg.svg?color=green)](https://github.com/krentzd/napari-clemreg/raw/master/LICENSE) @@ -13088,8 +13858,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [conda]: https://docs.conda.io/en/latest/ This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template. -",text/markdown,https://github.com/krentzd/napari-clemreg,Daniel Krentzel,dkrentzel@pm.me,MIT,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['typing-extensions', 'setuptools', 'packaging', 'numpy ==1.22.0', 'magicgui ==0.7.3', 'scipy ==1.10.1', 'napari', 'scikit-image ==0.21.0', 'h5py ==3.9.0', 'matplotlib ==3.7.3', 'imageio ==2.31.5', 'tifffile ==2023.7.10', 'probreg ==0.3.6', 'open3d ==0.17.0', 'transforms3d ==0.4.1', 'tqdm ==4.66.1', 'empanada-dl ==0.1.7', 'torch ==2.0.1', 'connected-components-3d ==3.12.3']",>=3.7,"['Bug Tracker, https://github.com/krentzd/napari-clemreg/issues', 'Documentation, https://github.com/krentzd/napari-clemreg#README.md', 'Source Code, https://github.com/krentzd/napari-clemreg', 'User Support, https://github.com/krentzd/napari-clemreg/issues']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-clemreg.fixed_segmentation,Run Fixed Segmentation,napari_clemreg.widgets.fixed_segmentation:fixed_segmentation_widget,napari-clemreg.moving_segmentation,Run Moving Segmentation,napari_clemreg.widgets.moving_segmentation:moving_segmentation_widget,napari-clemreg.point_cloud_sampling,Point Cloud Sampling,napari_clemreg.widgets.point_cloud_sampling:point_cloud_sampling_widget,napari-clemreg.make_run_registration,Run registration,False,napari-clemreg.fixed_segmentation,1) Electron Microscopy (EM) Segmentation,False,napari-clemreg.moving_segmentation,2) Fluorescence Microscopy (FM) Segmentation,False,napari-clemreg.point_cloud_sampling,3) Point Cloud Sampling,False,napari-clemreg.registration_warping,Point Cloud Registration & Warping,napari_clemreg.widgets.registration_warping:registration_warping_widget,,,,,,,,napari-clemreg.sample_data,benchmark_dataset.1,Sample Benchmark Data,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-clemreg.get_reader,Get Reader,napari_clemreg._reader:napari_get_reader,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-clemreg.sample_data,Sample Benchmark Data,napari_clemreg.clemreg.sample_data:make_sample_data,,,,,,,,,,,,,,,,,napari-clemreg.registration_warping,4) Point Cloud Registration & Image Warping,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -125,napari-clipboard,0.0.1,napari clipboard,A plugin for creating napari layers from the System clipboard,Kyle Harrington,BSD-3-Clause,https://github.com/kephale/napari-clipboard,653e73accbfb1eff4bc39409,['conda'],,https://pypi.org/project/napari-clipboard,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-clipboard,http://api.anaconda.org/packages/conda-forge/napari-clipboard,http://anaconda.org/conda-forge/napari-clipboard,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,https://github.com/kephale/napari-clipboard,['pyh9208f05_0'],0.0.1,conda-forge/napari-clipboard/0.0.1,1.0,0.0,2023-10-29 15:00:57.484000+00:00,2023-10-29 15:01:00.534000+00:00,conda,noarch/napari-clipboard-0.0.1-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy']",noarch,1698591528201.0,None-any-None,pyh9208f05_0,2023-10-29 15:00:57.898000+00:00,a28a96227d7bae76f77e7b679c335cdb,2b7b99a2d11d53c676cf37473ccc22ae67be691eaa5ecbf77088b8df50ea5db2,11183.0,conda-forge/napari-clipboard/0.0.1/noarch/napari-clipboard-0.0.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-clipboard/0.0.1/noarch/napari-clipboard-0.0.1-pyh9208f05_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-clipboard.image_from_clipboard,New Image from clipboard,napari_clipboard._widget:image_from_clipboard,,,,2.1,napari-clipboard,0.0.1,,A plugin for creating napari layers from the System clipboard,"# napari-clipboard +",text/markdown,https://github.com/krentzd/napari-clemreg,Daniel Krentzel,dkrentzel@pm.me,MIT,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['typing_extensions', 'setuptools', 'packaging', 'numpy==1.22.0', 'magicgui==0.7.3', 'scipy==1.10.1', 'napari', 'scikit-image==0.21.0', 'h5py==3.9.0', 'matplotlib==3.7.3', 'imageio==2.31.5', 'tifffile==2023.7.10', 'probreg==0.3.6', 'open3d==0.17.0', 'transforms3d==0.4.1', 'tqdm==4.66.1', 'empanada-dl==0.1.7', 'torch==2.0.1', 'magicgui==0.7.3', 'connected-components-3d==3.12.3']",>=3.7,"['Bug Tracker, https://github.com/krentzd/napari-clemreg/issues', 'Documentation, https://github.com/krentzd/napari-clemreg#README.md', 'Source Code, https://github.com/krentzd/napari-clemreg', 'User Support, https://github.com/krentzd/napari-clemreg/issues']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-clemreg.fixed_segmentation,Run Fixed Segmentation,napari_clemreg.widgets.fixed_segmentation:fixed_segmentation_widget,napari-clemreg.moving_segmentation,Run Moving Segmentation,napari_clemreg.widgets.moving_segmentation:moving_segmentation_widget,napari-clemreg.point_cloud_sampling,Point Cloud Sampling,napari_clemreg.widgets.point_cloud_sampling:point_cloud_sampling_widget,napari-clemreg.make_run_registration,Run registration,False,napari-clemreg.fixed_segmentation,1) Electron Microscopy (EM) Segmentation,False,napari-clemreg.moving_segmentation,2) Fluorescence Microscopy (FM) Segmentation,False,napari-clemreg.point_cloud_sampling,3) Point Cloud Sampling,False,napari-clemreg.registration_warping,Point Cloud Registration & Warping,napari_clemreg.widgets.registration_warping:registration_warping_widget,,,,,,,,napari-clemreg.sample_data,benchmark_dataset.1,Sample Benchmark Data,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-clemreg.get_reader,Get Reader,napari_clemreg._reader:napari_get_reader,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-clemreg.sample_data,Sample Benchmark Data,napari_clemreg.clemreg.sample_data:make_sample_data,,,,,,,,,,,,,,napari-clemreg.registration_warping,4) Point Cloud Registration & Image Warping,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +133,napari-clipboard,0.0.1,napari clipboard,A plugin for creating napari layers from the System clipboard,Kyle Harrington,BSD-3-Clause,https://github.com/kephale/napari-clipboard,653e73accbfb1eff4bc39409,['conda'],,https://pypi.org/project/napari-clipboard,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-clipboard,http://api.anaconda.org/packages/conda-forge/napari-clipboard,http://anaconda.org/conda-forge/napari-clipboard,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,https://github.com/kephale/napari-clipboard,['pyh9208f05_0'],0.0.1,conda-forge/napari-clipboard/0.0.1,1.0,0.0,2023-10-29 15:00:57.484000+00:00,2023-10-29 15:01:00.534000+00:00,conda,noarch/napari-clipboard-0.0.1-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy']",noarch,1698591528201.0,None-any-None,pyh9208f05_0,2023-10-29 15:00:57.898000+00:00,a28a96227d7bae76f77e7b679c335cdb,2b7b99a2d11d53c676cf37473ccc22ae67be691eaa5ecbf77088b8df50ea5db2,11183.0,conda-forge/napari-clipboard/0.0.1/noarch/napari-clipboard-0.0.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-clipboard/0.0.1/noarch/napari-clipboard-0.0.1-pyh9208f05_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-clipboard.image_from_clipboard,New Image from clipboard,napari_clipboard._widget:image_from_clipboard,,,,2.1,napari-clipboard,0.0.1,,A plugin for creating napari layers from the System clipboard,"# napari-clipboard [![License BSD-3](https://img.shields.io/pypi/l/napari-clipboard.svg?color=green)](https://github.com/kephale/napari-clipboard/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-clipboard.svg?color=green)](https://pypi.org/project/napari-clipboard) @@ -13156,8 +13926,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/kephale/napari-clipboard,Kyle Harrington,czi@kyleharrington.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'napari', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/kephale/napari-clipboard/issues', 'Documentation, https://github.com/kephale/napari-clipboard#README.md', 'Source Code, https://github.com/kephale/napari-clipboard', 'User Support, https://github.com/kephale/napari-clipboard/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-clipboard.image_from_clipboard,New Image from clipboard,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -126,napari-clusters-plotter,0.8.1,napari-clusters-plotter,A plugin to use with napari for clustering objects according to their properties,"Laura Zigutyte, Ryan Savill, Johannes Müller, Marcelo Zoccoler, Thorsten Wagner, Robert Haase",BSD-3-Clause,https://github.com/BiAPoL/napari-clusters-plotter,620e3e3b8d5f589364370e4b,['conda'],,https://github.com/BiAPoL/napari-clusters-plotter,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-clusters-plotter,http://api.anaconda.org/packages/conda-forge/napari-clusters-plotter,http://anaconda.org/conda-forge/napari-clusters-plotter,"['0.2.2', '0.3.0', '0.4.0', '0.5.0', '0.5.1', '0.5.2', '0.6.0', '0.6.1', '0.6.2', '0.7.0', '0.7.1', '0.7.2', '0.7.3', '0.8.0', '0.8.1']",0.8.1,0.8.1,['noarch'],35.0,https://github.com/BiAPoL/napari-clusters-plotter,"['pyh9208f05_0', 'pyhd8ed1ab_0']",0.2.2,conda-forge/napari-clusters-plotter/0.2.2,1.0,0.0,2022-02-17 12:23:21.379000+00:00,2024-08-15 11:16:10.412000+00:00,conda,noarch/napari-clusters-plotter-0.2.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['hdbscan', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-tools-menu', 'numpy', 'pandas', 'pyclesperanto-prototype', 'pyopencl', 'python >=3.6,<3.10', 'scikit-learn', 'umap-learn']",noarch,1645100449402.0,None-any-None,pyhd8ed1ab_0,2022-02-17 12:23:21.631000+00:00,07f52cce5c1c2ff04c0cdc07115d9b61,None,75065.0,conda-forge/napari-clusters-plotter/0.2.2/noarch/napari-clusters-plotter-0.2.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-clusters-plotter/0.2.2/noarch/napari-clusters-plotter-0.2.2-pyhd8ed1ab_0.tar.bz2,conda,0.2.2,conda-forge,['main'],public,,0.2.1,napari-clusters-plotter.PlotterWidget,PlotterWidget,napari_clusters_plotter._plotter:PlotterWidget,,,,2.1,napari-clusters-plotter,0.8.1,,A plugin to use with napari for clustering objects according to their properties,"# napari-clusters-plotter +",text/markdown,https://github.com/kephale/napari-clipboard,Kyle Harrington,czi@kyleharrington.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'napari', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/kephale/napari-clipboard/issues', 'Documentation, https://github.com/kephale/napari-clipboard#README.md', 'Source Code, https://github.com/kephale/napari-clipboard', 'User Support, https://github.com/kephale/napari-clipboard/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-clipboard.image_from_clipboard,New Image from clipboard,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +134,napari-clusters-plotter,0.8.1,napari-clusters-plotter,A plugin to use with napari for clustering objects according to their properties,"Laura Zigutyte, Ryan Savill, Johannes Müller, Marcelo Zoccoler, Thorsten Wagner, Robert Haase",BSD-3-Clause,https://github.com/BiAPoL/napari-clusters-plotter,620e3e3b8d5f589364370e4b,['conda'],,https://github.com/BiAPoL/napari-clusters-plotter,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-clusters-plotter,http://api.anaconda.org/packages/conda-forge/napari-clusters-plotter,http://anaconda.org/conda-forge/napari-clusters-plotter,"['0.2.2', '0.3.0', '0.4.0', '0.5.0', '0.5.1', '0.5.2', '0.6.0', '0.6.1', '0.6.2', '0.7.0', '0.7.1', '0.7.2', '0.7.3', '0.8.0', '0.8.1']",0.8.1,0.8.1,['noarch'],35.0,https://github.com/BiAPoL/napari-clusters-plotter,"['pyh9208f05_0', 'pyhd8ed1ab_0']",0.2.2,conda-forge/napari-clusters-plotter/0.2.2,1.0,0.0,2022-02-17 12:23:21.379000+00:00,2024-08-15 11:16:10.412000+00:00,conda,noarch/napari-clusters-plotter-0.2.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['hdbscan', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-tools-menu', 'numpy', 'pandas', 'pyclesperanto-prototype', 'pyopencl', 'python >=3.6,<3.10', 'scikit-learn', 'umap-learn']",noarch,1645100449402.0,None-any-None,pyhd8ed1ab_0,2022-02-17 12:23:21.631000+00:00,07f52cce5c1c2ff04c0cdc07115d9b61,None,75065.0,conda-forge/napari-clusters-plotter/0.2.2/noarch/napari-clusters-plotter-0.2.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-clusters-plotter/0.2.2/noarch/napari-clusters-plotter-0.2.2-pyhd8ed1ab_0.tar.bz2,conda,0.2.2,conda-forge,['main'],public,,0.2.1,napari-clusters-plotter.PlotterWidget,PlotterWidget,napari_clusters_plotter._plotter:PlotterWidget,,,,2.1,napari-clusters-plotter,0.8.1,,A plugin to use with napari for clustering objects according to their properties,"# napari-clusters-plotter [![License](https://img.shields.io/pypi/l/napari-clusters-plotter.svg?color=green)](https://github.com/lazigu/napari-clusters-plotter/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-clusters-plotter.svg?color=green)](https://pypi.org/project/napari-clusters-plotter) @@ -13464,8 +14234,8 @@ with a detailed description. [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ [conda]: https://docs.conda.io/projects/conda/en/latest/ -",text/markdown,https://github.com/BiAPoL/napari-clusters-plotter,"Laura Zigutyte, Ryan Savill, Johannes Müller, Marcelo Zoccoler, Thorsten Wagner, Robert Haase","zigutyte@gmail.com, robert.haase@tu-dresden.de",BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine >=0.1.4', 'numpy <=1.23.5,>=1.21', 'scikit-learn', 'matplotlib', 'pandas', 'umap-learn', 'napari-tools-menu', 'napari-skimage-regionprops >=0.3.1', 'hdbscan', 'qtpy', 'dask', 'napari >=0.4.19', 'magicgui', 'scikit-image', 'superqt', 'scipy']",>=3.7,"['Bug Tracker, https://github.com/BiAPoL/napari-clusters-plotter/issues', 'Documentation, https://github.com/BiAPoL/napari-clusters-plotter', 'Source Code, https://github.com/BiAPoL/napari-clusters-plotter', 'User Support, https://github.com/BiAPoL/napari-clusters-plotter/issues']",,True,0.3.0,conda-forge/napari-clusters-plotter/0.3.0,0.4.0,conda-forge/napari-clusters-plotter/0.4.0,0.5.0,conda-forge/napari-clusters-plotter/0.5.0,conda,noarch/napari-clusters-plotter-0.3.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core', 'finesse', 'hdbscan', 'magicgui', 'napari', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-tools-menu', 'numpy', 'pandas', 'pyclesperanto-prototype', 'pyopencl', 'pytest', 'python >=3.6,<3.10', 'qtpy', 'scikit-image', 'scikit-learn', 'umap-learn']",pyhd8ed1ab_0,1649329425501.0,None-any-None,noarch,2022-04-07 11:06:33.815000+00:00,2041a30eff649a713358adc38b7c26f2,None,81893.0,conda-forge/napari-clusters-plotter/0.3.0/noarch/napari-clusters-plotter-0.3.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-clusters-plotter/0.3.0/noarch/napari-clusters-plotter-0.3.0-pyhd8ed1ab_0.tar.bz2,conda,0.3.0,conda-forge,['main'],conda,noarch/napari-clusters-plotter-0.4.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core', 'finesse', 'hdbscan', 'magicgui', 'napari', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-tools-menu', 'numpy', 'pandas', 'pyclesperanto-prototype', 'pyopencl', 'pytest', 'python >=3.6,<3.10', 'qtpy', 'scikit-image', 'scikit-learn', 'umap-learn']",noarch,1651038670058.0,None-any-None,pyhd8ed1ab_0,2022-04-27 05:54:02.318000+00:00,e2a6dc789427aa8e1265eb4bdbb4121a,None,82363.0,conda-forge/napari-clusters-plotter/0.4.0/noarch/napari-clusters-plotter-0.4.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-clusters-plotter/0.4.0/noarch/napari-clusters-plotter-0.4.0-pyhd8ed1ab_0.tar.bz2,conda,0.4.0,conda-forge,['main'],conda,noarch/napari-clusters-plotter-0.5.0-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['dask-core', 'finesse', 'hdbscan', 'magicgui', 'napari', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-tools-menu', 'numpy', 'pandas', 'pyclesperanto-prototype', 'pyopencl', 'pytest', 'python >=3.6,<3.10', 'qtpy', 'scikit-image', 'scikit-learn', 'umap-learn']",BSD-3-Clause,python,1651769556322.0,2022-05-05 16:55:46.649000+00:00,9daf041775eab6f42a29664e5d0040cb,None,84925.0,conda-forge/napari-clusters-plotter/0.5.0/noarch/napari-clusters-plotter-0.5.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-clusters-plotter/0.5.0/noarch/napari-clusters-plotter-0.5.0-pyhd8ed1ab_0.tar.bz2,conda,0.5.0,conda-forge,['main'],,napari-clusters-plotter.DimensionalityReductionWidget,DimensionalityReductionWidget,napari_clusters_plotter._dimensionality_reduction:DimensionalityReductionWidget,napari-clusters-plotter.ClusteringWidget,ClusteringWidget,napari_clusters_plotter._clustering:ClusteringWidget,,,,napari-clusters-plotter.PlotterWidget,PlotterWidget,False,napari-clusters-plotter.DimensionalityReductionWidget,DimensionalityReductionWidget,False,napari-clusters-plotter.ClusteringWidget,ClusteringWidget,False,,,,,,,,,,,,,,,,,0.5.1,conda-forge/napari-clusters-plotter/0.5.1,0.5.2,conda-forge/napari-clusters-plotter/0.5.2,0.6.0,conda-forge/napari-clusters-plotter/0.6.0,conda,noarch/napari-clusters-plotter-0.5.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core', 'finesse', 'hdbscan', 'magicgui', 'napari', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-tools-menu', 'numpy', 'pandas', 'pyclesperanto-prototype', 'pyopencl', 'pytest', 'python >=3.6,<3.10', 'qtpy', 'scikit-image', 'scikit-learn', 'umap-learn']",noarch,1654630694546.0,None-any-None,pyhd8ed1ab_0,2022-06-07 19:41:37.861000+00:00,adcfd4b5ad9b74b68b9f5fea39daa847,None,86109.0,conda-forge/napari-clusters-plotter/0.5.1/noarch/napari-clusters-plotter-0.5.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-clusters-plotter/0.5.1/noarch/napari-clusters-plotter-0.5.1-pyhd8ed1ab_0.tar.bz2,conda,0.5.1,conda-forge,['main'],conda,noarch/napari-clusters-plotter-0.5.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core', 'finesse', 'hdbscan', 'magicgui', 'napari', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-tools-menu', 'numpy', 'pandas', 'pyclesperanto-prototype', 'pyopencl', 'pytest', 'python >=3.6', 'qtpy', 'scikit-image', 'scikit-learn', 'umap-learn']",noarch,1661009130561.0,None-any-None,pyhd8ed1ab_0,2022-08-20 15:28:33.836000+00:00,4577bafaf99c79d86b14256deac8277e,None,86580.0,conda-forge/napari-clusters-plotter/0.5.2/noarch/napari-clusters-plotter-0.5.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-clusters-plotter/0.5.2/noarch/napari-clusters-plotter-0.5.2-pyhd8ed1ab_0.tar.bz2,conda,0.5.2,conda-forge,['main'],conda,noarch/napari-clusters-plotter-0.6.0-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['dask-core', 'finesse', 'hdbscan', 'magicgui', 'napari', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-tools-menu', 'numpy', 'pandas', 'pytest', 'python >=3.6', 'qtpy', 'scikit-image', 'scikit-learn', 'umap-learn']",BSD-3-Clause,python,1671000709816.0,2022-12-14 06:53:57.382000+00:00,3c90a72082f8252fb5dc91cab86ab9a7,c75c855159e16c01d8c889ee376d3ca654d85cc80ec6394ee4c70f269a468baf,82645.0,conda-forge/napari-clusters-plotter/0.6.0/noarch/napari-clusters-plotter-0.6.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-clusters-plotter/0.6.0/noarch/napari-clusters-plotter-0.6.0-pyhd8ed1ab_0.conda,conda,0.6.0,conda-forge,['main'],,,,,,,0.6.1,conda-forge/napari-clusters-plotter/0.6.1,0.6.2,conda-forge/napari-clusters-plotter/0.6.2,conda,noarch/napari-clusters-plotter-0.6.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['dask-core', 'finesse', 'hdbscan', 'magicgui', 'napari', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-tools-menu', 'numpy', 'pandas', 'pytest', 'python >=3.6', 'qtpy', 'scikit-image', 'scikit-learn', 'superqt', 'umap-learn']",noarch,1676632868126.0,None-any-None,pyhd8ed1ab_0,2023-02-17 11:23:26.988000+00:00,c1d272fd55775b03a1ff3c65970acde4,191ef7603828e694a60d201e89232d0c1ed9057fc37c697676dc280edf14c7b6,83541.0,conda-forge/napari-clusters-plotter/0.6.1/noarch/napari-clusters-plotter-0.6.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-clusters-plotter/0.6.1/noarch/napari-clusters-plotter-0.6.1-pyhd8ed1ab_0.conda,conda,0.6.1,conda-forge,['main'],conda,noarch/napari-clusters-plotter-0.6.2-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['dask-core', 'finesse', 'hdbscan', 'magicgui', 'napari', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-tools-menu', 'numpy >=1.21,<=1.23.5', 'pandas', 'python >=3.6', 'qtpy', 'scikit-image', 'scikit-learn', 'superqt', 'umap-learn']",BSD-3-Clause,python,1682505976135.0,2023-04-26 10:49:05.429000+00:00,2462ce6cdbba7b3c3d72863cbe724042,ea3c97cbd703cc1688d3fd542c710e8d2695a486e1dd8821ad9c977982871ba5,89322.0,conda-forge/napari-clusters-plotter/0.6.2/noarch/napari-clusters-plotter-0.6.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-clusters-plotter/0.6.2/noarch/napari-clusters-plotter-0.6.2-pyhd8ed1ab_0.conda,conda,0.6.2,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,conda,noarch/napari-clusters-plotter-0.7.0-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['dask-core', 'finesse', 'hdbscan', 'magicgui', 'napari', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-tools-menu', 'numpy >=1.21,<=1.23.5', 'pandas', 'python >=3.6', 'qtpy', 'scikit-image', 'scikit-learn', 'superqt', 'umap-learn']",BSD-3-Clause,python,1682800512930.0,2023-04-29 20:37:54.600000+00:00,19d9e883d4a0b04bf05c25b71ec89f98,730a76d1552aadc198b1d63daa53b4532d9d433f91d2a553cf0553fdcc661cc0,92731.0,conda-forge/napari-clusters-plotter/0.7.0/noarch/napari-clusters-plotter-0.7.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-clusters-plotter/0.7.0/noarch/napari-clusters-plotter-0.7.0-pyhd8ed1ab_0.conda,conda,0.7.0,conda-forge,['main'],0.7.0,conda-forge/napari-clusters-plotter/0.7.0,conda,noarch/napari-clusters-plotter-0.7.1-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['dask-core', 'hdbscan', 'joblib', 'magicgui', 'matplotlib', 'napari', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.3.1', 'napari-tools-menu', 'numpy >=1.21,<=1.23.5', 'pandas', 'python >=3.6', 'qtpy', 'scikit-image', 'scikit-learn', 'superqt', 'umap-learn']",BSD-3-Clause,1682940956786.0,2023-05-01 11:38:37.870000+00:00,70c786852b9a971bf0d1986bd18426fb,85ae41cadf4204a227108503f6c8b0659047af29bad24dba2646f03865da055f,92763.0,conda-forge/napari-clusters-plotter/0.7.1/noarch/napari-clusters-plotter-0.7.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-clusters-plotter/0.7.1/noarch/napari-clusters-plotter-0.7.1-pyhd8ed1ab_0.conda,conda,0.7.1,conda-forge,['main'],conda,noarch/napari-clusters-plotter-0.7.2-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['dask-core', 'hdbscan', 'joblib', 'magicgui', 'matplotlib', 'napari', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.3.1', 'napari-tools-menu', 'numpy >=1.21,<=1.23.5', 'pandas', 'python >=3.6', 'qtpy', 'scikit-image', 'scikit-learn', 'superqt', 'umap-learn']",BSD-3-Clause,1683816411657.0,2023-05-11 14:49:03.120000+00:00,2b641514f3aad633bfabdf4ff391bc27,8934c7582f48458d94cfd6fedc5e73a1bcfbe2d457453cdb15fd92d6e4402009,92954.0,conda-forge/napari-clusters-plotter/0.7.2/noarch/napari-clusters-plotter-0.7.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-clusters-plotter/0.7.2/noarch/napari-clusters-plotter-0.7.2-pyhd8ed1ab_0.conda,conda,0.7.2,conda-forge,['main'],conda,noarch/napari-clusters-plotter-0.7.3-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['cython >=0.27,<3', 'dask-core', 'hdbscan', 'magicgui', 'matplotlib-base', 'napari', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.3.1', 'napari-tools-menu', 'numpy >=1.21,<=1.23.5', 'pandas', 'python >=3.7', 'qtpy', 'scikit-image', 'scikit-learn', 'scipy', 'superqt', 'umap-learn']",BSD-3-Clause,1694028703059.0,2023-09-06 19:33:54.316000+00:00,99bfa20f201e7469db062b8211d80a34,f9f10266a56e99aa84e8e0758a6ca73d5e0f3e5bfd7ad7132c43c77f990ec78c,92818.0,conda-forge/napari-clusters-plotter/0.7.3/noarch/napari-clusters-plotter-0.7.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-clusters-plotter/0.7.3/noarch/napari-clusters-plotter-0.7.3-pyhd8ed1ab_0.conda,conda,0.7.3,conda-forge,['main'],,, -127,napari-compressed-labels-io,0.0.2,napari-compressed-labels-io,Plugin exploring different options for reading and writing compressed and portable labels layers in napari.,Draga Doncila,MIT,https://github.com/DragaDoncila/napari-compressed-labels-io,61f857019501cf2a1dd5e16f,['conda'],,https://github.com/DragaDoncila/napari-compressed-labels-io,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-compressed-labels-io,http://api.anaconda.org/packages/conda-forge/napari-compressed-labels-io,http://anaconda.org/conda-forge/napari-compressed-labels-io,['0.0.2'],0.0.2,0.0.2,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.2,conda-forge/napari-compressed-labels-io/0.0.2,1.0,0.0,2022-01-31 21:39:09.626000+00:00,2023-06-18 08:40:40.550000+00:00,conda,noarch/napari-compressed-labels-io-0.0.2-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['dask-core', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.6', 'zarr']",noarch,1643665118340.0,None-any-None,pyhd8ed1ab_0,2022-01-31 21:39:10.341000+00:00,5af46a4ebad20ac856c1b918e0c80123,None,12345.0,conda-forge/napari-compressed-labels-io/0.0.2/noarch/napari-compressed-labels-io-0.0.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-compressed-labels-io/0.0.2/noarch/napari-compressed-labels-io-0.0.2-pyhd8ed1ab_0.tar.bz2,conda,0.0.2,conda-forge,['main'],public,,0.2.1,napari-compressed-labels-io.labels_to_zarr,labels_to_zarr,napari_compressed_labels_io._writer:labels_to_zarr,napari-compressed-labels-io.get_zarr_labels,['*'],True,2.1,napari-compressed-labels-io,0.0.2,['UNKNOWN'],Plugin exploring different options for reading and writing compressed and portable labels layers in napari.,"# napari-compressed-labels-io +",text/markdown,https://github.com/BiAPoL/napari-clusters-plotter,"Laura Zigutyte, Ryan Savill, Johannes Müller, Marcelo Zoccoler, Thorsten Wagner, Robert Haase","zigutyte@gmail.com, robert.haase@tu-dresden.de",BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine >=0.1.4', 'numpy <=1.23.5,>=1.21', 'scikit-learn', 'matplotlib', 'pandas', 'umap-learn', 'napari-tools-menu', 'napari-skimage-regionprops >=0.3.1', 'hdbscan', 'qtpy', 'dask', 'napari >=0.4.19', 'magicgui', 'scikit-image', 'superqt', 'scipy']",>=3.7,"['Bug Tracker, https://github.com/BiAPoL/napari-clusters-plotter/issues', 'Documentation, https://github.com/BiAPoL/napari-clusters-plotter', 'Source Code, https://github.com/BiAPoL/napari-clusters-plotter', 'User Support, https://github.com/BiAPoL/napari-clusters-plotter/issues']",,True,0.3.0,conda-forge/napari-clusters-plotter/0.3.0,0.4.0,conda-forge/napari-clusters-plotter/0.4.0,0.5.0,conda-forge/napari-clusters-plotter/0.5.0,conda,noarch/napari-clusters-plotter-0.3.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core', 'finesse', 'hdbscan', 'magicgui', 'napari', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-tools-menu', 'numpy', 'pandas', 'pyclesperanto-prototype', 'pyopencl', 'pytest', 'python >=3.6,<3.10', 'qtpy', 'scikit-image', 'scikit-learn', 'umap-learn']",pyhd8ed1ab_0,1649329425501.0,None-any-None,noarch,2022-04-07 11:06:33.815000+00:00,2041a30eff649a713358adc38b7c26f2,None,81893.0,conda-forge/napari-clusters-plotter/0.3.0/noarch/napari-clusters-plotter-0.3.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-clusters-plotter/0.3.0/noarch/napari-clusters-plotter-0.3.0-pyhd8ed1ab_0.tar.bz2,conda,0.3.0,conda-forge,['main'],conda,noarch/napari-clusters-plotter-0.4.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core', 'finesse', 'hdbscan', 'magicgui', 'napari', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-tools-menu', 'numpy', 'pandas', 'pyclesperanto-prototype', 'pyopencl', 'pytest', 'python >=3.6,<3.10', 'qtpy', 'scikit-image', 'scikit-learn', 'umap-learn']",noarch,1651038670058.0,None-any-None,pyhd8ed1ab_0,2022-04-27 05:54:02.318000+00:00,e2a6dc789427aa8e1265eb4bdbb4121a,None,82363.0,conda-forge/napari-clusters-plotter/0.4.0/noarch/napari-clusters-plotter-0.4.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-clusters-plotter/0.4.0/noarch/napari-clusters-plotter-0.4.0-pyhd8ed1ab_0.tar.bz2,conda,0.4.0,conda-forge,['main'],conda,noarch/napari-clusters-plotter-0.5.0-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['dask-core', 'finesse', 'hdbscan', 'magicgui', 'napari', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-tools-menu', 'numpy', 'pandas', 'pyclesperanto-prototype', 'pyopencl', 'pytest', 'python >=3.6,<3.10', 'qtpy', 'scikit-image', 'scikit-learn', 'umap-learn']",BSD-3-Clause,python,1651769556322.0,2022-05-05 16:55:46.649000+00:00,9daf041775eab6f42a29664e5d0040cb,None,84925.0,conda-forge/napari-clusters-plotter/0.5.0/noarch/napari-clusters-plotter-0.5.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-clusters-plotter/0.5.0/noarch/napari-clusters-plotter-0.5.0-pyhd8ed1ab_0.tar.bz2,conda,0.5.0,conda-forge,['main'],,napari-clusters-plotter.DimensionalityReductionWidget,DimensionalityReductionWidget,napari_clusters_plotter._dimensionality_reduction:DimensionalityReductionWidget,napari-clusters-plotter.ClusteringWidget,ClusteringWidget,napari_clusters_plotter._clustering:ClusteringWidget,,,,napari-clusters-plotter.PlotterWidget,PlotterWidget,False,napari-clusters-plotter.DimensionalityReductionWidget,DimensionalityReductionWidget,False,napari-clusters-plotter.ClusteringWidget,ClusteringWidget,False,,,,,,,,,,,,,,,,,0.5.1,conda-forge/napari-clusters-plotter/0.5.1,0.5.2,conda-forge/napari-clusters-plotter/0.5.2,0.6.0,conda-forge/napari-clusters-plotter/0.6.0,conda,noarch/napari-clusters-plotter-0.5.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core', 'finesse', 'hdbscan', 'magicgui', 'napari', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-tools-menu', 'numpy', 'pandas', 'pyclesperanto-prototype', 'pyopencl', 'pytest', 'python >=3.6,<3.10', 'qtpy', 'scikit-image', 'scikit-learn', 'umap-learn']",noarch,1654630694546.0,None-any-None,pyhd8ed1ab_0,2022-06-07 19:41:37.861000+00:00,adcfd4b5ad9b74b68b9f5fea39daa847,None,86109.0,conda-forge/napari-clusters-plotter/0.5.1/noarch/napari-clusters-plotter-0.5.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-clusters-plotter/0.5.1/noarch/napari-clusters-plotter-0.5.1-pyhd8ed1ab_0.tar.bz2,conda,0.5.1,conda-forge,['main'],conda,noarch/napari-clusters-plotter-0.5.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core', 'finesse', 'hdbscan', 'magicgui', 'napari', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-tools-menu', 'numpy', 'pandas', 'pyclesperanto-prototype', 'pyopencl', 'pytest', 'python >=3.6', 'qtpy', 'scikit-image', 'scikit-learn', 'umap-learn']",noarch,1661009130561.0,None-any-None,pyhd8ed1ab_0,2022-08-20 15:28:33.836000+00:00,4577bafaf99c79d86b14256deac8277e,None,86580.0,conda-forge/napari-clusters-plotter/0.5.2/noarch/napari-clusters-plotter-0.5.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-clusters-plotter/0.5.2/noarch/napari-clusters-plotter-0.5.2-pyhd8ed1ab_0.tar.bz2,conda,0.5.2,conda-forge,['main'],conda,noarch/napari-clusters-plotter-0.6.0-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['dask-core', 'finesse', 'hdbscan', 'magicgui', 'napari', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-tools-menu', 'numpy', 'pandas', 'pytest', 'python >=3.6', 'qtpy', 'scikit-image', 'scikit-learn', 'umap-learn']",BSD-3-Clause,python,1671000709816.0,2022-12-14 06:53:57.382000+00:00,3c90a72082f8252fb5dc91cab86ab9a7,c75c855159e16c01d8c889ee376d3ca654d85cc80ec6394ee4c70f269a468baf,82645.0,conda-forge/napari-clusters-plotter/0.6.0/noarch/napari-clusters-plotter-0.6.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-clusters-plotter/0.6.0/noarch/napari-clusters-plotter-0.6.0-pyhd8ed1ab_0.conda,conda,0.6.0,conda-forge,['main'],,,,,,,0.6.1,conda-forge/napari-clusters-plotter/0.6.1,0.6.2,conda-forge/napari-clusters-plotter/0.6.2,conda,noarch/napari-clusters-plotter-0.6.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['dask-core', 'finesse', 'hdbscan', 'magicgui', 'napari', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-tools-menu', 'numpy', 'pandas', 'pytest', 'python >=3.6', 'qtpy', 'scikit-image', 'scikit-learn', 'superqt', 'umap-learn']",noarch,1676632868126.0,None-any-None,pyhd8ed1ab_0,2023-02-17 11:23:26.988000+00:00,c1d272fd55775b03a1ff3c65970acde4,191ef7603828e694a60d201e89232d0c1ed9057fc37c697676dc280edf14c7b6,83541.0,conda-forge/napari-clusters-plotter/0.6.1/noarch/napari-clusters-plotter-0.6.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-clusters-plotter/0.6.1/noarch/napari-clusters-plotter-0.6.1-pyhd8ed1ab_0.conda,conda,0.6.1,conda-forge,['main'],conda,noarch/napari-clusters-plotter-0.6.2-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['dask-core', 'finesse', 'hdbscan', 'magicgui', 'napari', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-tools-menu', 'numpy >=1.21,<=1.23.5', 'pandas', 'python >=3.6', 'qtpy', 'scikit-image', 'scikit-learn', 'superqt', 'umap-learn']",BSD-3-Clause,python,1682505976135.0,2023-04-26 10:49:05.429000+00:00,2462ce6cdbba7b3c3d72863cbe724042,ea3c97cbd703cc1688d3fd542c710e8d2695a486e1dd8821ad9c977982871ba5,89322.0,conda-forge/napari-clusters-plotter/0.6.2/noarch/napari-clusters-plotter-0.6.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-clusters-plotter/0.6.2/noarch/napari-clusters-plotter-0.6.2-pyhd8ed1ab_0.conda,conda,0.6.2,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,conda,noarch/napari-clusters-plotter-0.7.0-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['dask-core', 'finesse', 'hdbscan', 'magicgui', 'napari', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-tools-menu', 'numpy >=1.21,<=1.23.5', 'pandas', 'python >=3.6', 'qtpy', 'scikit-image', 'scikit-learn', 'superqt', 'umap-learn']",BSD-3-Clause,python,1682800512930.0,2023-04-29 20:37:54.600000+00:00,19d9e883d4a0b04bf05c25b71ec89f98,730a76d1552aadc198b1d63daa53b4532d9d433f91d2a553cf0553fdcc661cc0,92731.0,conda-forge/napari-clusters-plotter/0.7.0/noarch/napari-clusters-plotter-0.7.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-clusters-plotter/0.7.0/noarch/napari-clusters-plotter-0.7.0-pyhd8ed1ab_0.conda,conda,0.7.0,conda-forge,['main'],conda,noarch/napari-clusters-plotter-0.7.1-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['dask-core', 'hdbscan', 'joblib', 'magicgui', 'matplotlib', 'napari', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.3.1', 'napari-tools-menu', 'numpy >=1.21,<=1.23.5', 'pandas', 'python >=3.6', 'qtpy', 'scikit-image', 'scikit-learn', 'superqt', 'umap-learn']",BSD-3-Clause,python,1682940956786.0,2023-05-01 11:38:37.870000+00:00,70c786852b9a971bf0d1986bd18426fb,85ae41cadf4204a227108503f6c8b0659047af29bad24dba2646f03865da055f,92763.0,conda-forge/napari-clusters-plotter/0.7.1/noarch/napari-clusters-plotter-0.7.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-clusters-plotter/0.7.1/noarch/napari-clusters-plotter-0.7.1-pyhd8ed1ab_0.conda,conda,0.7.1,conda-forge,['main'],0.7.0,conda-forge/napari-clusters-plotter/0.7.0,conda,noarch/napari-clusters-plotter-0.7.2-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['dask-core', 'hdbscan', 'joblib', 'magicgui', 'matplotlib', 'napari', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.3.1', 'napari-tools-menu', 'numpy >=1.21,<=1.23.5', 'pandas', 'python >=3.6', 'qtpy', 'scikit-image', 'scikit-learn', 'superqt', 'umap-learn']",BSD-3-Clause,1683816411657.0,2023-05-11 14:49:03.120000+00:00,2b641514f3aad633bfabdf4ff391bc27,8934c7582f48458d94cfd6fedc5e73a1bcfbe2d457453cdb15fd92d6e4402009,92954.0,conda-forge/napari-clusters-plotter/0.7.2/noarch/napari-clusters-plotter-0.7.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-clusters-plotter/0.7.2/noarch/napari-clusters-plotter-0.7.2-pyhd8ed1ab_0.conda,conda,0.7.2,conda-forge,['main'],0.7.1,conda-forge/napari-clusters-plotter/0.7.1,conda,noarch/napari-clusters-plotter-0.7.3-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['cython >=0.27,<3', 'dask-core', 'hdbscan', 'magicgui', 'matplotlib-base', 'napari', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.3.1', 'napari-tools-menu', 'numpy >=1.21,<=1.23.5', 'pandas', 'python >=3.7', 'qtpy', 'scikit-image', 'scikit-learn', 'scipy', 'superqt', 'umap-learn']",BSD-3-Clause,1694028703059.0,2023-09-06 19:33:54.316000+00:00,99bfa20f201e7469db062b8211d80a34,f9f10266a56e99aa84e8e0758a6ca73d5e0f3e5bfd7ad7132c43c77f990ec78c,92818.0,conda-forge/napari-clusters-plotter/0.7.3/noarch/napari-clusters-plotter-0.7.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-clusters-plotter/0.7.3/noarch/napari-clusters-plotter-0.7.3-pyhd8ed1ab_0.conda,conda,0.7.3,conda-forge,['main'],conda,noarch/napari-clusters-plotter-0.8.0-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['cython >=0.27,<3', 'dask-core', 'hdbscan', 'magicgui', 'matplotlib-base', 'napari', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.3.1', 'napari-tools-menu', 'numpy >=1.21,<=1.23.5', 'pandas', 'python >=3.7', 'qtpy', 'scikit-image', 'scikit-learn', 'scipy', 'superqt', 'umap-learn']",BSD-3-Clause,2024-06-13 09:38:26.474000+00:00,1980622c5b1d51a4e798bb0ad1565d15,ea2559e56ad9c7b9046d1e1647095c71df430f1ab1f3f4e11dbf85484b31b94a,98362.0,conda-forge/napari-clusters-plotter/0.8.0/noarch/napari-clusters-plotter-0.8.0-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-clusters-plotter/0.8.0/noarch/napari-clusters-plotter-0.8.0-pyh9208f05_0.conda,conda,0.8.0,conda-forge,['main'],,, +135,napari-compressed-labels-io,0.0.2,napari-compressed-labels-io,Plugin exploring different options for reading and writing compressed and portable labels layers in napari.,Draga Doncila,MIT,https://github.com/DragaDoncila/napari-compressed-labels-io,61f857019501cf2a1dd5e16f,['conda'],,https://github.com/DragaDoncila/napari-compressed-labels-io,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-compressed-labels-io,http://api.anaconda.org/packages/conda-forge/napari-compressed-labels-io,http://anaconda.org/conda-forge/napari-compressed-labels-io,['0.0.2'],0.0.2,0.0.2,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.2,conda-forge/napari-compressed-labels-io/0.0.2,1.0,0.0,2022-01-31 21:39:09.626000+00:00,2023-06-18 08:40:40.550000+00:00,conda,noarch/napari-compressed-labels-io-0.0.2-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['dask-core', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.6', 'zarr']",noarch,1643665118340.0,None-any-None,pyhd8ed1ab_0,2022-01-31 21:39:10.341000+00:00,5af46a4ebad20ac856c1b918e0c80123,None,12345.0,conda-forge/napari-compressed-labels-io/0.0.2/noarch/napari-compressed-labels-io-0.0.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-compressed-labels-io/0.0.2/noarch/napari-compressed-labels-io-0.0.2-pyhd8ed1ab_0.tar.bz2,conda,0.0.2,conda-forge,['main'],public,,0.2.1,napari-compressed-labels-io.labels_to_zarr,labels_to_zarr,napari_compressed_labels_io._writer:labels_to_zarr,napari-compressed-labels-io.get_zarr_labels,['*'],True,2.1,napari-compressed-labels-io,0.0.2,['UNKNOWN'],Plugin exploring different options for reading and writing compressed and portable labels layers in napari.,"# napari-compressed-labels-io [![License](https://img.shields.io/pypi/l/napari-compressed-labels-io.svg?color=green)](https://github.com/DragaDoncila/napari-compressed-labels-io/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-compressed-labels-io.svg?color=green)](https://pypi.org/project/napari-compressed-labels-io) @@ -13594,8 +14364,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/DragaDoncila/napari-compressed-labels-io,Draga Doncila,ddoncila@gmail.com,MIT,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'zarr', 'dask[complete]']",>=3.6,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-compressed-labels-io.labels_to_zarr,['labels'],labels,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -128,napari-conference,0.1.0,Napari Conference,A simple plugin that allows you to use napari + your webcam in video calls,Kyle Harrington,BSD-3-Clause,https://github.com/kephale/napari-conference,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-conference.make_widget,Make example magic widget,napari_conference._widget:conference_widget,,,,2.1,napari-conference,0.1.0,,A simple plugin that allows you to use napari + your webcam in video calls,"# napari-conference +",text/markdown,https://github.com/DragaDoncila/napari-compressed-labels-io,Draga Doncila,ddoncila@gmail.com,MIT,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'zarr', 'dask[complete]']",>=3.6,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-compressed-labels-io.labels_to_zarr,['labels'],labels,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +136,napari-conference,0.1.0,Napari Conference,A simple plugin that allows you to use napari + your webcam in video calls,Kyle Harrington,BSD-3-Clause,https://github.com/kephale/napari-conference,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-conference.make_widget,Make example magic widget,napari_conference._widget:conference_widget,,,,2.1,napari-conference,0.1.0,,A simple plugin that allows you to use napari + your webcam in video calls,"# napari-conference [![License BSD-3](https://img.shields.io/pypi/l/napari-conference.svg?color=green)](https://github.com/kephale/napari-conference/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-conference.svg?color=green)](https://pypi.org/project/napari-conference) @@ -13693,8 +14463,8 @@ https://github.com/napari/cookiecutter-napari-plugin#getting-started and review the napari docs for plugin developers: https://napari.org/stable/plugins/index.html --> -",text/markdown,https://github.com/kephale/napari-conference,Kyle Harrington,czi@kyleharrington.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'opencv-python', 'pyvirtualcam', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/kephale/napari-conference/issues', 'Documentation, https://github.com/kephale/napari-conference#README.md', 'Source Code, https://github.com/kephale/napari-conference', 'User Support, https://github.com/kephale/napari-conference/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-conference.make_widget,start conference,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -129,napari-conidie,1.0.2,Conidie,A segmentation tool to get conidie and hyphe,Herearii Metuarea,BSD-3-Clause,https://github.com/hereariim/napari-conidie,6435d6d53f7afa213bf4296a,['conda'],,https://github.com/hereariim/napari-conidie,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-conidie,http://api.anaconda.org/packages/conda-forge/napari-conidie,http://anaconda.org/conda-forge/napari-conidie,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-conidie/0.0.1,1.0,0.0,2023-04-11 21:53:21.454000+00:00,2023-06-18 17:27:59.692000+00:00,conda,noarch/napari-conidie-0.0.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['h5py', 'magicgui', 'matplotlib-base', 'napari >=0.4.17', 'numpy', 'pandas', 'python >=3.8,<3.11', 'qtpy', 'scikit-image']",noarch,1681249858791.0,None-any-None,pyhd8ed1ab_0,2023-04-11 21:53:22.175000+00:00,b2816611e20e367dae17edccece6543c,3677a22bd431071b000cadd2be25d97a67933911de38b579236597430a0dcb91,15463.0,conda-forge/napari-conidie/0.0.1/noarch/napari-conidie-0.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-conidie/0.0.1/noarch/napari-conidie-0.0.1-pyhd8ed1ab_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-conidie.segmentation,"Say hello, world!",napari_conidie._widget:process_function_segmentation,,,,2.1,napari-conidie,1.0.2,,A segmentation tool to get conidie and hyphe,"# napari-conidie +",text/markdown,https://github.com/kephale/napari-conference,Kyle Harrington,czi@kyleharrington.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'opencv-python', 'pyvirtualcam', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/kephale/napari-conference/issues', 'Documentation, https://github.com/kephale/napari-conference#README.md', 'Source Code, https://github.com/kephale/napari-conference', 'User Support, https://github.com/kephale/napari-conference/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-conference.make_widget,start conference,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +137,napari-conidie,1.0.2,Conidie,A segmentation tool to get conidie and hyphe,Herearii Metuarea,BSD-3-Clause,https://github.com/hereariim/napari-conidie,6435d6d53f7afa213bf4296a,['conda'],,https://github.com/hereariim/napari-conidie,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-conidie,http://api.anaconda.org/packages/conda-forge/napari-conidie,http://anaconda.org/conda-forge/napari-conidie,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-conidie/0.0.1,1.0,0.0,2023-04-11 21:53:21.454000+00:00,2023-06-18 17:27:59.692000+00:00,conda,noarch/napari-conidie-0.0.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['h5py', 'magicgui', 'matplotlib-base', 'napari >=0.4.17', 'numpy', 'pandas', 'python >=3.8,<3.11', 'qtpy', 'scikit-image']",noarch,1681249858791.0,None-any-None,pyhd8ed1ab_0,2023-04-11 21:53:22.175000+00:00,b2816611e20e367dae17edccece6543c,3677a22bd431071b000cadd2be25d97a67933911de38b579236597430a0dcb91,15463.0,conda-forge/napari-conidie/0.0.1/noarch/napari-conidie-0.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-conidie/0.0.1/noarch/napari-conidie-0.0.1-pyhd8ed1ab_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-conidie.segmentation,"Say hello, world!",napari_conidie._widget:process_function_segmentation,,,,2.1,napari-conidie,1.0.2,,A segmentation tool to get conidie and hyphe,"# napari-conidie [![License BSD-3](https://img.shields.io/pypi/l/napari-conidie.svg?color=green)](https://github.com/hereariim/napari-conidie/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-conidie.svg?color=green)](https://pypi.org/project/napari-conidie) @@ -13793,11 +14563,11 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/hereariim/napari-conidie,Herearii Metuarea,herearii.metuarea@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'pandas', 'h5py', 'scikit-image', 'napari', 'matplotlib', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/hereariim/napari-conidie/issues', 'Documentation, https://github.com/hereariim/napari-conidie#README.md', 'Source Code, https://github.com/hereariim/napari-conidie', 'User Support, https://github.com/hereariim/napari-conidie/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-conidie.table_csv,"Say hello, world!",napari_conidie._widget:quantitative_data_for_all,,,,,,,napari-conidie.segmentation,Segmentation,False,napari-conidie.table_csv,Show data,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -130,napari-console,0.1.0,napari-console,A plugin that adds a console to napari,,BSD-3-Clause,,601e8c3eeb495a1aba586316,['conda'],"napari-console is a plugin for the napari n-dimensional image +",text/markdown,https://github.com/hereariim/napari-conidie,Herearii Metuarea,herearii.metuarea@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'pandas', 'h5py', 'scikit-image', 'napari', 'matplotlib', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/hereariim/napari-conidie/issues', 'Documentation, https://github.com/hereariim/napari-conidie#README.md', 'Source Code, https://github.com/hereariim/napari-conidie', 'User Support, https://github.com/hereariim/napari-conidie/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-conidie.table_csv,"Say hello, world!",napari_conidie._widget:quantitative_data_for_all,,,,,,,napari-conidie.segmentation,Segmentation,False,napari-conidie.table_csv,Show data,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +138,napari-console,0.1.1,napari-console,A plugin that adds a console to napari,,BSD-3-Clause,,601e8c3eeb495a1aba586316,['conda'],"napari-console is a plugin for the napari n-dimensional image viewer. It adds an IPython console to the viewer, allowing users to interact with the viewer's API. -",https://github.com/napari/napari-console,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-console,http://api.anaconda.org/packages/conda-forge/napari-console,http://anaconda.org/conda-forge/napari-console,"['0.0.2', '0.0.3', '0.0.4', '0.0.6', '0.0.7', '0.0.8', '0.0.9', '0.1.0']",0.1.0,0.1.0,['noarch'],19.0,https://github.com/napari/napari-console,"['pyh73487a3_0', 'pyh9208f05_0', 'pyhd8ed1ab_0', 'pyhd8ed1ab_1']",0.0.2,conda-forge/napari-console/0.0.2,1.0,0.0,2021-02-06 12:31:54.809000+00:00,2024-10-02 00:30:27.550000+00:00,conda,noarch/napari-console-0.0.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['ipykernel >=5.2.0', 'ipython >=7.7.0', 'napari-plugin-engine >=0.1.9', 'python >=3.7', 'qtconsole >=4.5.1,!=4.7.6', 'qtpy >=1.7.0']",noarch,1612614619667.0,None-any-None,pyhd8ed1ab_0,2021-02-06 12:31:55.807000+00:00,710bee02699748bc45695b1d5c1767f8,None,10710.0,conda-forge/napari-console/0.0.2/noarch/napari-console-0.0.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-console/0.0.2/noarch/napari-console-0.0.2-pyhd8ed1ab_0.tar.bz2,conda,0.0.2,conda-forge,['main'],public,,0.1.0,,,,,,,2.1,napari-console,0.1.0,,A plugin that adds a console to napari,"# napari-console (WIP, under active development) +",https://github.com/napari/napari-console,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-console,http://api.anaconda.org/packages/conda-forge/napari-console,http://anaconda.org/conda-forge/napari-console,"['0.0.2', '0.0.3', '0.0.4', '0.0.6', '0.0.7', '0.0.8', '0.0.9', '0.1.0', '0.1.1', '0.1.2', '0.1.3']",0.1.3,0.1.3,['noarch'],35.0,https://github.com/napari/napari-console,"['pyh73487a3_0', 'pyh73487a3_1', 'pyh9208f05_0', 'pyhd8ed1ab_0', 'pyhd8ed1ab_1']",0.0.2,conda-forge/napari-console/0.0.2,1.0,0.0,2021-02-06 12:31:54.809000+00:00,2024-12-21 22:10:27.795000+00:00,conda,noarch/napari-console-0.0.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['ipykernel >=5.2.0', 'ipython >=7.7.0', 'napari-plugin-engine >=0.1.9', 'python >=3.7', 'qtconsole >=4.5.1,!=4.7.6', 'qtpy >=1.7.0']",noarch,1612614619667.0,None-any-None,pyhd8ed1ab_0,2021-02-06 12:31:55.807000+00:00,710bee02699748bc45695b1d5c1767f8,None,10710.0,conda-forge/napari-console/0.0.2/noarch/napari-console-0.0.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-console/0.0.2/noarch/napari-console-0.0.2-pyhd8ed1ab_0.tar.bz2,conda,0.0.2,conda-forge,['main'],public,,0.1.0,,,,,,,2.1,napari-console,0.1.1,,A plugin that adds a console to napari,"# napari-console (WIP, under active development) [![License](https://img.shields.io/pypi/l/napari-console.svg?color=green)](https://github.com/napari/napari-console/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-console.svg?color=green)](https://pypi.org/project/napari-console) @@ -13889,8 +14659,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,,,napari team ,BSD-3-Clause,"['Development Status :: 4 - Beta', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Software Development :: Testing']","['IPython>=7.7.0', 'ipykernel>=5.2.0', 'qtconsole!=4.7.6,!=5.4.2,>=4.5.1', 'qtpy>=1.7.0', 'napari-console[pyqt5]; extra == ""pyqt""', 'PyQt5!=5.15.0,>=5.13.2; extra == ""pyqt5""', 'PyQt6>6.5; extra == ""pyqt6""', 'PyQt6!=6.6.1; platform_system == ""Darwin"" and extra == ""pyqt6""', 'napari-console[pyside2]; extra == ""pyside""', 'PySide2!=5.15.0,>=5.13.2; (python_version < ""3.11"" and platform_machine != ""arm64"") and extra == ""pyside2""', 'PySide6<6.5; python_version < ""3.12"" and extra == ""pyside6_experimental""', 'napari-console[pyqt]; extra == ""qt""', 'napari[pyqt]; extra == ""testing""']",>=3.9,"['Homepage, https://github.com/napari/napari-console', 'Bug Tracker, https://github.com/napari/napari-console/issues', 'Source Code, https://github.com/napari/napari-console']","['pyqt', 'pyqt5', 'pyqt6', 'pyside', 'pyside2', 'pyside6_experimental', 'qt', 'testing']",False,0.0.3,conda-forge/napari-console/0.0.3,0.0.4,conda-forge/napari-console/0.0.4,0.0.6,conda-forge/napari-console/0.0.6,conda,noarch/napari-console-0.0.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['ipykernel >=5.2.0', 'ipython >=7.7.0', 'napari-plugin-engine >=0.1.9', 'python >=3.7', 'qtconsole >=4.5.1,!=4.7.6', 'qtpy >=1.7.0']",pyhd8ed1ab_0,1613373637314.0,None-any-None,noarch,2021-02-15 07:22:11.539000+00:00,1e60f64bfd6873c45851e02e36037399,None,10788.0,conda-forge/napari-console/0.0.3/noarch/napari-console-0.0.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-console/0.0.3/noarch/napari-console-0.0.3-pyhd8ed1ab_0.tar.bz2,conda,0.0.3,conda-forge,['main'],conda,noarch/napari-console-0.0.4-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['ipykernel >=5.2.0', 'ipython >=7.7.0', 'napari-plugin-engine >=0.1.9', 'python >=3.7', 'qtconsole >=4.5.1,!=4.7.6', 'qtpy >=1.7.0']",noarch,1630381493329.0,None-any-None,pyhd8ed1ab_0,2021-08-31 03:46:09.677000+00:00,de59acedf6da9757944720bf671b57d6,None,10859.0,conda-forge/napari-console/0.0.4/noarch/napari-console-0.0.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-console/0.0.4/noarch/napari-console-0.0.4-pyhd8ed1ab_0.tar.bz2,conda,0.0.4,conda-forge,['main'],conda,noarch/napari-console-0.0.4-pyhd8ed1ab_1.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_1,1.0,"['ipykernel >=5.2.0', 'ipython >=7.7.0', 'napari-plugin-engine >=0.1.9', 'python >=3.7', 'qtconsole-base >=4.5.1,!=4.7.6', 'qtpy >=1.7.0']",BSD-3-Clause,python,1644771752439.0,2022-02-13 17:06:12.842000+00:00,3b88657a1443ebbf55e0687574cb107b,None,11199.0,conda-forge/napari-console/0.0.4/noarch/napari-console-0.0.4-pyhd8ed1ab_1.tar.bz2,//api.anaconda.org/download/conda-forge/napari-console/0.0.4/noarch/napari-console-0.0.4-pyhd8ed1ab_1.tar.bz2,conda,0.0.4,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,0.0.7,conda-forge/napari-console/0.0.7,0.0.8,conda-forge/napari-console/0.0.8,0.0.9,conda-forge/napari-console/0.0.9,conda,noarch/napari-console-0.0.6-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['ipykernel >=5.2.0', 'ipython >=7.7.0', 'napari-plugin-engine >=0.1.9', 'python >=3.7', 'qtconsole-base >=4.5.1,!=4.7.6', 'qtpy >=1.7.0']",noarch,1664449770207.0,None-any-None,pyhd8ed1ab_0,2022-09-29 11:10:36.840000+00:00,c0c9d67d44c69446dde0ca69843e90bb,None,11523.0,conda-forge/napari-console/0.0.6/noarch/napari-console-0.0.6-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-console/0.0.6/noarch/napari-console-0.0.6-pyhd8ed1ab_0.tar.bz2,conda,0.0.6,conda-forge,['main'],conda,noarch/napari-console-0.0.7-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['ipykernel >=5.2.0', 'ipython >=7.7.0', 'napari-plugin-engine >=0.1.9', 'python >=3.7', 'qtconsole-base >=4.5.1,!=4.7.6', 'qtpy >=1.7.0']",noarch,1670975826410.0,None-any-None,pyhd8ed1ab_0,2022-12-13 23:57:53.532000+00:00,d0104aed34922cfc5aa91b0030ac2dbc,2519c331fd320f0a6e2e111c8e6d0311227aa6a06558f5452673724396994b78,13580.0,conda-forge/napari-console/0.0.7/noarch/napari-console-0.0.7-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-console/0.0.7/noarch/napari-console-0.0.7-pyhd8ed1ab_0.conda,conda,0.0.7,conda-forge,['main'],conda,noarch/napari-console-0.0.8-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['ipykernel >=5.2.0', 'ipython >=7.7.0', 'napari-plugin-engine >=0.1.9', 'python >=3.7', 'qtconsole-base >=4.5.1,!=4.7.6,!=5.4.2', 'qtpy >=1.7.0']",BSD-3-Clause,python,1681022504176.0,2023-04-09 06:42:51.795000+00:00,7f90462a38dbba0079918ee46977851a,320b64a18387cfda240e7179fd2cbb31c9a860de28e6e7256aeb223acd85f307,13296.0,conda-forge/napari-console/0.0.8/noarch/napari-console-0.0.8-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-console/0.0.8/noarch/napari-console-0.0.8-pyhd8ed1ab_0.conda,conda,0.0.8,conda-forge,['main'],,,,,,,0.1.0,conda-forge/napari-console/0.1.0,,,conda,noarch/napari-console-0.0.9-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['ipykernel >=5.2.0', 'ipython >=7.7.0', 'python >=3.7', 'qtconsole-base >=4.5.1,!=4.7.6,!=5.4.2', 'qtpy >=1.7.0']",noarch,1699137823218.0,None-any-None,pyh9208f05_0,2023-11-04 22:44:52.164000+00:00,239a95c42021f8c97e9b9ede5526ab2b,421de70afc8132a978e0fa993f00c3e943eb9e33f99f82dfca90571f2ce7789c,13667.0,conda-forge/napari-console/0.0.9/noarch/napari-console-0.0.9-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-console/0.0.9/noarch/napari-console-0.0.9-pyh9208f05_0.conda,conda,0.0.9,conda-forge,['main'],conda,noarch/napari-console-0.1.0-pyh73487a3_0.conda,None-any-None,False,noarch,pyh73487a3_0,0.0,"['ipykernel >=5.2.0', 'ipython >=7.7.0', 'python >=3.7', 'qtconsole-base >=4.5.1,!=4.7.6,!=5.4.2', 'qtpy >=1.7.0']",BSD-3-Clause,python,1727828917309.0,2024-10-02 00:30:25.239000+00:00,a20133b2202a3c593cd996d591033bd5,6c73e2595a66763b90bfb8e637e8ae3555f25f6e7a46a16124c45138232c1342,14958.0,conda-forge/napari-console/0.1.0/noarch/napari-console-0.1.0-pyh73487a3_0.conda,//api.anaconda.org/download/conda-forge/napari-console/0.1.0/noarch/napari-console-0.1.0-pyh73487a3_0.conda,conda,0.1.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -131,napari-convpaint,0.5.1,napari ConvPaint,A plugin for segmentation by pixel classification using convolutional feature extraction,Guillaume Witz,BSD-3-Clause,https://github.com/guiwitz/napari-convpaint,656e397846052fd1c7183b48,['conda'],,https://github.com/guiwitz/napari-convpaint,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-convpaint,http://api.anaconda.org/packages/conda-forge/napari-convpaint,http://anaconda.org/conda-forge/napari-convpaint,"['0.1.0', '0.2.0', '0.2.1', '0.5.1']",0.5.1,0.5.1,['noarch'],11.0,https://github.com/guiwitz/napari-convpaint,['pyhd8ed1ab_0'],0.1.0,conda-forge/napari-convpaint/0.1.0,1.0,0.0,2023-12-04 20:41:25.423000+00:00,2024-09-20 21:56:22.893000+00:00,conda,noarch/napari-convpaint-0.1.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['einops', 'joblib', 'napari-annotation-project', 'napari-guitils', 'numpy', 'pandas', 'python >=3.8', 'pytorch', 'scikit-image', 'scikit-learn', 'torchvision', 'zarr']",noarch,1701722364636.0,None-any-None,pyhd8ed1ab_0,2023-12-04 20:41:25.908000+00:00,b9760e028a7f5834bc2d324482f08f52,afc636860d2dca3541e63f3bdd7c75f333bca0f53e77118bba02b17306c58060,26382.0,conda-forge/napari-convpaint/0.1.0/noarch/napari-convpaint-0.1.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-convpaint/0.1.0/noarch/napari-convpaint-0.1.0-pyhd8ed1ab_0.conda,conda,0.1.0,conda-forge,['main'],public,,0.2.1,napari-convpaint.make_qwidget,ConvPaint widget,napari_convpaint.conv_paint:ConvPaintWidget,,,,2.1,napari-convpaint,0.5.1,,A plugin for segmentation by pixel classification using convolutional feature extraction," +",text/markdown,,,napari team ,BSD-3-Clause,"['Development Status :: 4 - Beta', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Software Development :: Testing']","['IPython>=7.7.0', 'ipykernel>=5.2.0', 'qtconsole!=4.7.6,!=5.4.2,>=4.5.1', 'qtpy>=1.7.0', 'napari-console[pyqt5]; extra == ""pyqt""', 'PyQt5!=5.15.0,>=5.13.2; extra == ""pyqt5""', 'PyQt6>6.5; extra == ""pyqt6""', 'PyQt6!=6.6.1; platform_system == ""Darwin"" and extra == ""pyqt6""', 'napari-console[pyside2]; extra == ""pyside""', 'PySide2!=5.15.0,>=5.13.2; (python_version < ""3.11"" and platform_machine != ""arm64"") and extra == ""pyside2""', 'PySide6<6.5; python_version < ""3.12"" and extra == ""pyside6_experimental""', 'napari-console[pyqt]; extra == ""qt""', 'napari[pyqt]; extra == ""testing""']",>=3.9,"['Homepage, https://github.com/napari/napari-console', 'Bug Tracker, https://github.com/napari/napari-console/issues', 'Source Code, https://github.com/napari/napari-console']","['pyqt', 'pyqt5', 'pyqt6', 'pyside', 'pyside2', 'pyside6_experimental', 'qt', 'testing']",False,0.0.3,conda-forge/napari-console/0.0.3,0.0.4,conda-forge/napari-console/0.0.4,0.0.6,conda-forge/napari-console/0.0.6,conda,noarch/napari-console-0.0.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['ipykernel >=5.2.0', 'ipython >=7.7.0', 'napari-plugin-engine >=0.1.9', 'python >=3.7', 'qtconsole >=4.5.1,!=4.7.6', 'qtpy >=1.7.0']",pyhd8ed1ab_0,1613373637314.0,None-any-None,noarch,2021-02-15 07:22:11.539000+00:00,1e60f64bfd6873c45851e02e36037399,None,10788.0,conda-forge/napari-console/0.0.3/noarch/napari-console-0.0.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-console/0.0.3/noarch/napari-console-0.0.3-pyhd8ed1ab_0.tar.bz2,conda,0.0.3,conda-forge,['main'],conda,noarch/napari-console-0.0.4-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['ipykernel >=5.2.0', 'ipython >=7.7.0', 'napari-plugin-engine >=0.1.9', 'python >=3.7', 'qtconsole >=4.5.1,!=4.7.6', 'qtpy >=1.7.0']",noarch,1630381493329.0,None-any-None,pyhd8ed1ab_0,2021-08-31 03:46:09.677000+00:00,de59acedf6da9757944720bf671b57d6,None,10859.0,conda-forge/napari-console/0.0.4/noarch/napari-console-0.0.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-console/0.0.4/noarch/napari-console-0.0.4-pyhd8ed1ab_0.tar.bz2,conda,0.0.4,conda-forge,['main'],conda,noarch/napari-console-0.0.4-pyhd8ed1ab_1.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_1,1.0,"['ipykernel >=5.2.0', 'ipython >=7.7.0', 'napari-plugin-engine >=0.1.9', 'python >=3.7', 'qtconsole-base >=4.5.1,!=4.7.6', 'qtpy >=1.7.0']",BSD-3-Clause,python,1644771752439.0,2022-02-13 17:06:12.842000+00:00,3b88657a1443ebbf55e0687574cb107b,None,11199.0,conda-forge/napari-console/0.0.4/noarch/napari-console-0.0.4-pyhd8ed1ab_1.tar.bz2,//api.anaconda.org/download/conda-forge/napari-console/0.0.4/noarch/napari-console-0.0.4-pyhd8ed1ab_1.tar.bz2,conda,0.0.4,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,0.0.7,conda-forge/napari-console/0.0.7,0.0.8,conda-forge/napari-console/0.0.8,0.0.9,conda-forge/napari-console/0.0.9,conda,noarch/napari-console-0.0.6-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['ipykernel >=5.2.0', 'ipython >=7.7.0', 'napari-plugin-engine >=0.1.9', 'python >=3.7', 'qtconsole-base >=4.5.1,!=4.7.6', 'qtpy >=1.7.0']",noarch,1664449770207.0,None-any-None,pyhd8ed1ab_0,2022-09-29 11:10:36.840000+00:00,c0c9d67d44c69446dde0ca69843e90bb,None,11523.0,conda-forge/napari-console/0.0.6/noarch/napari-console-0.0.6-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-console/0.0.6/noarch/napari-console-0.0.6-pyhd8ed1ab_0.tar.bz2,conda,0.0.6,conda-forge,['main'],conda,noarch/napari-console-0.0.7-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['ipykernel >=5.2.0', 'ipython >=7.7.0', 'napari-plugin-engine >=0.1.9', 'python >=3.7', 'qtconsole-base >=4.5.1,!=4.7.6', 'qtpy >=1.7.0']",noarch,1670975826410.0,None-any-None,pyhd8ed1ab_0,2022-12-13 23:57:53.532000+00:00,d0104aed34922cfc5aa91b0030ac2dbc,2519c331fd320f0a6e2e111c8e6d0311227aa6a06558f5452673724396994b78,13580.0,conda-forge/napari-console/0.0.7/noarch/napari-console-0.0.7-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-console/0.0.7/noarch/napari-console-0.0.7-pyhd8ed1ab_0.conda,conda,0.0.7,conda-forge,['main'],conda,noarch/napari-console-0.0.8-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['ipykernel >=5.2.0', 'ipython >=7.7.0', 'napari-plugin-engine >=0.1.9', 'python >=3.7', 'qtconsole-base >=4.5.1,!=4.7.6,!=5.4.2', 'qtpy >=1.7.0']",BSD-3-Clause,python,1681022504176.0,2023-04-09 06:42:51.795000+00:00,7f90462a38dbba0079918ee46977851a,320b64a18387cfda240e7179fd2cbb31c9a860de28e6e7256aeb223acd85f307,13296.0,conda-forge/napari-console/0.0.8/noarch/napari-console-0.0.8-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-console/0.0.8/noarch/napari-console-0.0.8-pyhd8ed1ab_0.conda,conda,0.0.8,conda-forge,['main'],,,,,,,0.1.0,conda-forge/napari-console/0.1.0,0.1.1,conda-forge/napari-console/0.1.1,conda,noarch/napari-console-0.0.9-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['ipykernel >=5.2.0', 'ipython >=7.7.0', 'python >=3.7', 'qtconsole-base >=4.5.1,!=4.7.6,!=5.4.2', 'qtpy >=1.7.0']",noarch,1699137823218.0,None-any-None,pyh9208f05_0,2023-11-04 22:44:52.164000+00:00,239a95c42021f8c97e9b9ede5526ab2b,421de70afc8132a978e0fa993f00c3e943eb9e33f99f82dfca90571f2ce7789c,13667.0,conda-forge/napari-console/0.0.9/noarch/napari-console-0.0.9-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-console/0.0.9/noarch/napari-console-0.0.9-pyh9208f05_0.conda,conda,0.0.9,conda-forge,['main'],conda,noarch/napari-console-0.1.0-pyh73487a3_0.conda,None-any-None,False,noarch,pyh73487a3_0,0.0,"['ipykernel >=5.2.0', 'ipython >=7.7.0', 'python >=3.7', 'qtconsole-base >=4.5.1,!=4.7.6,!=5.4.2', 'qtpy >=1.7.0']",BSD-3-Clause,python,1727828917309.0,2024-10-02 00:30:25.239000+00:00,a20133b2202a3c593cd996d591033bd5,6c73e2595a66763b90bfb8e637e8ae3555f25f6e7a46a16124c45138232c1342,14958.0,conda-forge/napari-console/0.1.0/noarch/napari-console-0.1.0-pyh73487a3_0.conda,//api.anaconda.org/download/conda-forge/napari-console/0.1.0/noarch/napari-console-0.1.0-pyh73487a3_0.conda,conda,0.1.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,conda,noarch/napari-console-0.1.1-pyh73487a3_0.conda,None-any-None,False,noarch,pyh73487a3_0,0.0,"['ipykernel >=5.2.0', 'ipython >=7.7.0', 'python >=3.7', 'qtconsole-base >=4.5.1,!=4.7.6,!=5.4.2', 'qtpy >=1.7.0']",BSD-3-Clause,python,1730958577132.0,2024-11-07 05:50:53.046000+00:00,06be93d8422d69c07dbdbee4ff723026,e09596498070a108a556d13a6eff44b3b2b8a2c0070e8ff3d2929e76e6faf00e,15134.0,conda-forge/napari-console/0.1.1/noarch/napari-console-0.1.1-pyh73487a3_0.conda,//api.anaconda.org/download/conda-forge/napari-console/0.1.1/noarch/napari-console-0.1.1-pyh73487a3_0.conda,conda,0.1.1,conda-forge,['main'],conda,noarch/napari-console-0.1.2-pyh73487a3_0.conda,None-any-None,False,noarch,pyh73487a3_0,0.0,"['ipykernel >=5.2.0', 'ipython >=7.7.0', 'python >=3.7', 'qtconsole-base >=4.5.1,!=4.7.6,!=5.4.2', 'qtpy >=1.7.0']",BSD-3-Clause,python,1733494704523.0,2024-12-06 14:19:57.917000+00:00,605b5882e17a854a3ce92e7d512cd48a,c2b89d4c6fa2b8386266cdfe539548833fc7da7d976c38b66af0b036863f06da,15186.0,conda-forge/napari-console/0.1.2/noarch/napari-console-0.1.2-pyh73487a3_0.conda,//api.anaconda.org/download/conda-forge/napari-console/0.1.2/noarch/napari-console-0.1.2-pyh73487a3_0.conda,conda,0.1.2,conda-forge,['main'],0.1.2,conda-forge/napari-console/0.1.2,conda,noarch/napari-console-0.1.2-pyh73487a3_1.conda,None-any-None,False,noarch,pyh73487a3_1,1.0,"['ipykernel >=5.2.0', 'ipython >=7.7.0', 'python >=3.9', 'qtconsole-base >=4.5.1,!=4.7.6,!=5.4.2', 'qtpy >=1.7.0']",BSD-3-Clause,1734055992358.0,2024-12-13 02:14:32.099000+00:00,2da695c33c09119284b8acb9cfcd53f7,7475fb46908691e83c6fef1f47cd60a561152add0768d811acde18609dddc7b6,15279.0,conda-forge/napari-console/0.1.2/noarch/napari-console-0.1.2-pyh73487a3_1.conda,//api.anaconda.org/download/conda-forge/napari-console/0.1.2/noarch/napari-console-0.1.2-pyh73487a3_1.conda,conda,0.1.2,conda-forge,['main'],0.1.3,conda-forge/napari-console/0.1.3,conda,noarch/napari-console-0.1.3-pyh73487a3_0.conda,None-any-None,False,noarch,pyh73487a3_0,0.0,"['ipykernel >=5.2.0', 'ipython >=7.7.0', 'python >=3.9', 'qtconsole-base >=4.5.1,!=4.7.6,!=5.4.2', 'qtpy >=1.7.0']",BSD-3-Clause,1734818941398.0,2024-12-21 22:10:26.306000+00:00,c8cde8302b28b00a96b9e2eeefae7eb3,3eda2debe5276dfe9ccf1febb8c62189d9737147cdd7cbd4fcf69368330f79f3,15355.0,conda-forge/napari-console/0.1.3/noarch/napari-console-0.1.3-pyh73487a3_0.conda,//api.anaconda.org/download/conda-forge/napari-console/0.1.3/noarch/napari-console-0.1.3-pyh73487a3_0.conda,conda,0.1.3,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,, +139,napari-convpaint,0.5.2,napari ConvPaint,A plugin for segmentation by pixel classification using convolutional feature extraction,Guillaume Witz,BSD-3-Clause,https://github.com/guiwitz/napari-convpaint,656e397846052fd1c7183b48,['conda'],,https://github.com/guiwitz/napari-convpaint,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-convpaint,http://api.anaconda.org/packages/conda-forge/napari-convpaint,http://anaconda.org/conda-forge/napari-convpaint,"['0.1.0', '0.2.0', '0.2.1', '0.5.1', '0.5.2']",0.5.2,0.5.2,['noarch'],15.0,https://github.com/guiwitz/napari-convpaint,"['pyha07c04f_0', 'pyhd8ed1ab_0']",0.1.0,conda-forge/napari-convpaint/0.1.0,1.0,0.0,2023-12-04 20:41:25.423000+00:00,2024-10-16 07:10:25.654000+00:00,conda,noarch/napari-convpaint-0.1.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['einops', 'joblib', 'napari-annotation-project', 'napari-guitils', 'numpy', 'pandas', 'python >=3.8', 'pytorch', 'scikit-image', 'scikit-learn', 'torchvision', 'zarr']",noarch,1701722364636.0,None-any-None,pyhd8ed1ab_0,2023-12-04 20:41:25.908000+00:00,b9760e028a7f5834bc2d324482f08f52,afc636860d2dca3541e63f3bdd7c75f333bca0f53e77118bba02b17306c58060,26382.0,conda-forge/napari-convpaint/0.1.0/noarch/napari-convpaint-0.1.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-convpaint/0.1.0/noarch/napari-convpaint-0.1.0-pyhd8ed1ab_0.conda,conda,0.1.0,conda-forge,['main'],public,,0.2.1,napari-convpaint.make_qwidget,ConvPaint widget,napari_convpaint.conv_paint:ConvPaintWidget,,,,2.1,napari-convpaint,0.5.2,,A plugin for segmentation by pixel classification using convolutional feature extraction," [![License](https://img.shields.io/pypi/l/napari-convpaint.svg?color=green)](https://github.com/guiwitz/napari-convpaint/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-convpaint.svg?color=green)](https://pypi.org/project/napari-convpaint) [![Python Version](https://img.shields.io/pypi/pyversions/napari-convpaint.svg?color=green)](https://python.org) @@ -13977,8 +14747,8 @@ If you find Convpaint useful in your research, please consider citing: journal = {bioRxiv} } ``` -",text/markdown,https://github.com/guiwitz/napari-convpaint,Guillaume Witz,guillaume.witz@unibe.ch,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['einops', 'joblib', 'magicgui', 'napari', 'napari-annotation-project', 'napari-guitils', 'numpy', 'pyyaml', 'qtpy', 'scikit-learn', 'scikit-image', 'tifffile', 'torch', 'torchvision>=0.13.0', 'pandas', 'zarr', 'cellpose; extra == ""cellpose""', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.9,"['Bug Tracker, https://github.com/guiwitz/napari-convpaint/issues', 'Documentation, https://github.com/guiwitz/napari-convpaint#README.md', 'Source Code, https://github.com/guiwitz/napari-convpaint', 'User Support, https://github.com/guiwitz/napari-convpaint/issues']","['cellpose', 'testing']",False,0.2.0,conda-forge/napari-convpaint/0.2.0,0.2.1,conda-forge/napari-convpaint/0.2.1,0.5.1,conda-forge/napari-convpaint/0.5.1,conda,noarch/napari-convpaint-0.2.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['einops', 'joblib', 'magicgui', 'napari', 'napari-annotation-project', 'napari-guitils', 'numpy', 'pandas', 'python >=3.8', 'pytorch', 'pyyaml', 'qtpy', 'scikit-image', 'scikit-learn', 'tifffile', 'torchvision', 'zarr']",pyhd8ed1ab_0,1702068943286.0,None-any-None,noarch,2023-12-08 20:58:31.495000+00:00,25e94c81858c018c2586a0c00f294d0e,6780ee292de68dfe6f7ddf3c7b27a2067c78dea02270e10e0894df0840acc0ce,28162.0,conda-forge/napari-convpaint/0.2.0/noarch/napari-convpaint-0.2.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-convpaint/0.2.0/noarch/napari-convpaint-0.2.0-pyhd8ed1ab_0.conda,conda,0.2.0,conda-forge,['main'],conda,noarch/napari-convpaint-0.2.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['einops', 'joblib', 'magicgui', 'napari', 'napari-annotation-project', 'napari-guitils', 'numpy', 'pandas', 'python >=3.8', 'pytorch', 'pyyaml', 'qtpy', 'scikit-image', 'scikit-learn', 'tifffile', 'torchvision >=0.13.0', 'zarr']",noarch,1702239056696.0,None-any-None,pyhd8ed1ab_0,2023-12-10 20:13:03.215000+00:00,b65ed3c6c2182a1eff7e8c097de88f84,04095632050d11cd1fc19bdf9d932ccf8b63be38cc480239c6f25ee15d595645,28077.0,conda-forge/napari-convpaint/0.2.1/noarch/napari-convpaint-0.2.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-convpaint/0.2.1/noarch/napari-convpaint-0.2.1-pyhd8ed1ab_0.conda,conda,0.2.1,conda-forge,['main'],conda,noarch/napari-convpaint-0.5.1-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['einops', 'joblib', 'magicgui', 'napari', 'napari-annotation-project', 'napari-guitils', 'numpy', 'pandas', 'python >=3.9', 'pytorch', 'pyyaml', 'qtpy', 'scikit-image', 'scikit-learn', 'tifffile', 'torchvision >=0.13.0', 'zarr']",BSD-3-Clause,python,1726869233831.0,2024-09-20 21:56:20.298000+00:00,299e87c0f54ebfe762d017fafce99c66,b9d24d113be36802caaf1a67de04d1b89853d8d34534a96058f10da609387393,39273.0,conda-forge/napari-convpaint/0.5.1/noarch/napari-convpaint-0.5.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-convpaint/0.5.1/noarch/napari-convpaint-0.5.1-pyhd8ed1ab_0.conda,conda,0.5.1,conda-forge,['main'],,napari-convpaint.labelcell3d,Label cell 3D,napari_convpaint.convpaint_sample:create_annotation_cell3d,,,,,,,napari-convpaint.make_qwidget,ConvPaint,False,,,,,,,,,,,,,,,,,,,,napari-convpaint.labelcell3d,labelcell3d,Label cell 3D,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -132,napari-cookiecut,0.1.1,Cookiecut,Fixed cut,Sean Martin,BSD-3-Clause,https://github.com/seankmartin/napari-cookiecut,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-cookiecut.get_reader,Open data with Cookiecut,napari_cookiecut._reader:napari_get_reader,napari-cookiecut.get_reader,['*.npy'],False,2.1,napari-cookiecut,0.1.1,,Fixed cut,"# napari-cookiecut +",text/markdown,https://github.com/guiwitz/napari-convpaint,Guillaume Witz,guillaume.witz@unibe.ch,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['einops', 'joblib', 'magicgui', 'napari', 'napari-annotation-project', 'napari-guitils', 'numpy', 'pyyaml', 'qtpy', 'scikit-learn', 'scikit-image', 'tifffile', 'torch', 'torchvision>=0.13.0', 'pandas', 'zarr', 'cellpose; extra == ""cellpose""', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.9,"['Bug Tracker, https://github.com/guiwitz/napari-convpaint/issues', 'Documentation, https://github.com/guiwitz/napari-convpaint#README.md', 'Source Code, https://github.com/guiwitz/napari-convpaint', 'User Support, https://github.com/guiwitz/napari-convpaint/issues']","['cellpose', 'testing']",False,0.2.0,conda-forge/napari-convpaint/0.2.0,0.2.1,conda-forge/napari-convpaint/0.2.1,0.5.1,conda-forge/napari-convpaint/0.5.1,conda,noarch/napari-convpaint-0.2.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['einops', 'joblib', 'magicgui', 'napari', 'napari-annotation-project', 'napari-guitils', 'numpy', 'pandas', 'python >=3.8', 'pytorch', 'pyyaml', 'qtpy', 'scikit-image', 'scikit-learn', 'tifffile', 'torchvision', 'zarr']",pyhd8ed1ab_0,1702068943286.0,None-any-None,noarch,2023-12-08 20:58:31.495000+00:00,25e94c81858c018c2586a0c00f294d0e,6780ee292de68dfe6f7ddf3c7b27a2067c78dea02270e10e0894df0840acc0ce,28162.0,conda-forge/napari-convpaint/0.2.0/noarch/napari-convpaint-0.2.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-convpaint/0.2.0/noarch/napari-convpaint-0.2.0-pyhd8ed1ab_0.conda,conda,0.2.0,conda-forge,['main'],conda,noarch/napari-convpaint-0.2.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['einops', 'joblib', 'magicgui', 'napari', 'napari-annotation-project', 'napari-guitils', 'numpy', 'pandas', 'python >=3.8', 'pytorch', 'pyyaml', 'qtpy', 'scikit-image', 'scikit-learn', 'tifffile', 'torchvision >=0.13.0', 'zarr']",noarch,1702239056696.0,None-any-None,pyhd8ed1ab_0,2023-12-10 20:13:03.215000+00:00,b65ed3c6c2182a1eff7e8c097de88f84,04095632050d11cd1fc19bdf9d932ccf8b63be38cc480239c6f25ee15d595645,28077.0,conda-forge/napari-convpaint/0.2.1/noarch/napari-convpaint-0.2.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-convpaint/0.2.1/noarch/napari-convpaint-0.2.1-pyhd8ed1ab_0.conda,conda,0.2.1,conda-forge,['main'],conda,noarch/napari-convpaint-0.5.1-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['einops', 'joblib', 'magicgui', 'napari', 'napari-annotation-project', 'napari-guitils', 'numpy', 'pandas', 'python >=3.9', 'pytorch', 'pyyaml', 'qtpy', 'scikit-image', 'scikit-learn', 'tifffile', 'torchvision >=0.13.0', 'zarr']",BSD-3-Clause,python,1726869233831.0,2024-09-20 21:56:20.298000+00:00,299e87c0f54ebfe762d017fafce99c66,b9d24d113be36802caaf1a67de04d1b89853d8d34534a96058f10da609387393,39273.0,conda-forge/napari-convpaint/0.5.1/noarch/napari-convpaint-0.5.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-convpaint/0.5.1/noarch/napari-convpaint-0.5.1-pyhd8ed1ab_0.conda,conda,0.5.1,conda-forge,['main'],,napari-convpaint.labelcell3d,Label cell 3D,napari_convpaint.convpaint_sample:create_annotation_cell3d,,,,,,,napari-convpaint.make_qwidget,ConvPaint,False,,,,,,,,,,,,,,,,,,,,napari-convpaint.labelcell3d,labelcell3d,Label cell 3D,0.5.2,conda-forge/napari-convpaint/0.5.2,,,,,conda,noarch/napari-convpaint-0.5.2-pyha07c04f_0.conda,0.0,BSD-3-Clause,False,python,"['einops', 'joblib', 'magicgui', 'napari', 'napari-annotation-project', 'napari-guitils', 'numpy', 'pandas', 'python >=3.9', 'pytorch', 'pyyaml', 'qtpy', 'scikit-image', 'scikit-learn', 'tifffile', 'torchvision >=0.13.0', 'zarr']",noarch,1729062505134.0,None-any-None,pyha07c04f_0,2024-10-16 07:10:23.843000+00:00,b1a837fee10d1ceee3eb7e42cf674de2,ea83443f58946b12d86fac4c67659b56ececbbafe0efbdbe913e412c0da58cd9,39180.0,conda-forge/napari-convpaint/0.5.2/noarch/napari-convpaint-0.5.2-pyha07c04f_0.conda,//api.anaconda.org/download/conda-forge/napari-convpaint/0.5.2/noarch/napari-convpaint-0.5.2-pyha07c04f_0.conda,conda,0.5.2,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +140,napari-cookiecut,0.1.1,Cookiecut,Fixed cut,Sean Martin,BSD-3-Clause,https://github.com/seankmartin/napari-cookiecut,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-cookiecut.get_reader,Open data with Cookiecut,napari_cookiecut._reader:napari_get_reader,napari-cookiecut.get_reader,['*.npy'],False,2.1,napari-cookiecut,0.1.1,,Fixed cut,"# napari-cookiecut [![License BSD-3](https://img.shields.io/pypi/l/napari-cookiecut.svg?color=green)](https://github.com/seankmartin/napari-cookiecut/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-cookiecut.svg?color=green)](https://pypi.org/project/napari-cookiecut) @@ -14045,8 +14815,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/seankmartin/napari-cookiecut,Sean Martin,martins7@tcd.ie,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/seankmartin/napari-cookiecut/issues', 'Documentation, https://github.com/seankmartin/napari-cookiecut#README.md', 'Source Code, https://github.com/seankmartin/napari-cookiecut', 'User Support, https://github.com/seankmartin/napari-cookiecut/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-cookiecut.write_multiple,Save multi-layer data with Cookiecut,napari_cookiecut._writer:write_multiple,napari-cookiecut.write_single_image,Save image data with Cookiecut,napari_cookiecut._writer:write_single_image,napari-cookiecut.make_sample_data,Load sample data from Cookiecut,napari_cookiecut._sample_data:make_sample_data,napari-cookiecut.make_qwidget,Example QWidget,False,napari-cookiecut.make_magic_widget,Example Magic Widget,False,napari-cookiecut.make_func_widget,Example Function Widget,True,,,,napari-cookiecut.make_qwidget,Make example QWidget,napari_cookiecut._widget:ExampleQWidget,napari-cookiecut.write_multiple,"['image*', 'labels*']",,napari-cookiecut.write_single_image,['image'],['.npy'],,napari-cookiecut.make_sample_data,unique_id.1,Cookiecut,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-cookiecut.make_magic_widget,Make example magic widget,napari_cookiecut._widget:example_magic_widget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-cookiecut.make_func_widget,Make example function widget,napari_cookiecut._widget:example_function_widget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -133,napari-correct-drift,0.4.0,Napari Correct Drift,Drift correction 2D/3D for Napari similar to Fijis Correct 3D drift macro,Christoph Sommer,BSD-3-Clause,https://github.com/sommerc/napari-correct-drift,64c93fd3fa1fed29fb030bd0,['conda'],,https://github.com/sommerc/napari-correct-drift,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-correct-drift,http://api.anaconda.org/packages/conda-forge/napari-correct-drift,http://anaconda.org/conda-forge/napari-correct-drift,"['0.0.1', '0.0.2', '0.3.0', '0.4.0']",0.4.0,0.4.0,['noarch'],9.0,https://github.com/sommerc/napari-correct-drift,['pyh9208f05_0'],0.0.1,conda-forge/napari-correct-drift/0.0.1,1.0,0.0,2023-08-01 17:24:32.959000+00:00,2023-11-06 23:26:12.300000+00:00,conda,noarch/napari-correct-drift-0.0.1-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image', 'scipy']",noarch,1690910547025.0,None-any-None,pyh9208f05_0,2023-08-01 17:24:33.344000+00:00,321f6ec370ec284dbe436b8ef33a691b,c01685898bee2771496f12969d38c25e785dde4f2d91182a94967357d738f56c,20940.0,conda-forge/napari-correct-drift/0.0.1/noarch/napari-correct-drift-0.0.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-correct-drift/0.0.1/noarch/napari-correct-drift-0.0.1-pyh9208f05_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-correct-drift.sample_2d,Sample Data 2D,napari_correct_drift._sample_data:sample_2d,,,,2.1,napari-correct-drift,0.4.0,,Drift correction 2D/3D for Napari similar to Fijis Correct 3D drift macro,"# napari-correct-drift +",text/markdown,https://github.com/seankmartin/napari-cookiecut,Sean Martin,martins7@tcd.ie,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/seankmartin/napari-cookiecut/issues', 'Documentation, https://github.com/seankmartin/napari-cookiecut#README.md', 'Source Code, https://github.com/seankmartin/napari-cookiecut', 'User Support, https://github.com/seankmartin/napari-cookiecut/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-cookiecut.write_multiple,Save multi-layer data with Cookiecut,napari_cookiecut._writer:write_multiple,napari-cookiecut.write_single_image,Save image data with Cookiecut,napari_cookiecut._writer:write_single_image,napari-cookiecut.make_sample_data,Load sample data from Cookiecut,napari_cookiecut._sample_data:make_sample_data,napari-cookiecut.make_qwidget,Example QWidget,False,napari-cookiecut.make_magic_widget,Example Magic Widget,False,napari-cookiecut.make_func_widget,Example Function Widget,True,,,,napari-cookiecut.make_qwidget,Make example QWidget,napari_cookiecut._widget:ExampleQWidget,napari-cookiecut.write_multiple,"['image*', 'labels*']",,napari-cookiecut.write_single_image,['image'],['.npy'],,napari-cookiecut.make_sample_data,unique_id.1,Cookiecut,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-cookiecut.make_magic_widget,Make example magic widget,napari_cookiecut._widget:example_magic_widget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-cookiecut.make_func_widget,Make example function widget,napari_cookiecut._widget:example_function_widget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +141,napari-correct-drift,0.4.0,Napari Correct Drift,Drift correction 2D/3D for Napari similar to Fijis Correct 3D drift macro,Christoph Sommer,BSD-3-Clause,https://github.com/sommerc/napari-correct-drift,64c93fd3fa1fed29fb030bd0,['conda'],,https://github.com/sommerc/napari-correct-drift,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-correct-drift,http://api.anaconda.org/packages/conda-forge/napari-correct-drift,http://anaconda.org/conda-forge/napari-correct-drift,"['0.0.1', '0.0.2', '0.3.0', '0.4.0']",0.4.0,0.4.0,['noarch'],9.0,https://github.com/sommerc/napari-correct-drift,['pyh9208f05_0'],0.0.1,conda-forge/napari-correct-drift/0.0.1,1.0,0.0,2023-08-01 17:24:32.959000+00:00,2023-11-06 23:26:12.300000+00:00,conda,noarch/napari-correct-drift-0.0.1-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image', 'scipy']",noarch,1690910547025.0,None-any-None,pyh9208f05_0,2023-08-01 17:24:33.344000+00:00,321f6ec370ec284dbe436b8ef33a691b,c01685898bee2771496f12969d38c25e785dde4f2d91182a94967357d738f56c,20940.0,conda-forge/napari-correct-drift/0.0.1/noarch/napari-correct-drift-0.0.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-correct-drift/0.0.1/noarch/napari-correct-drift-0.0.1-pyh9208f05_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-correct-drift.sample_2d,Sample Data 2D,napari_correct_drift._sample_data:sample_2d,,,,2.1,napari-correct-drift,0.4.0,,Drift correction 2D/3D for Napari similar to Fijis Correct 3D drift macro,"# napari-correct-drift [![License BSD-3](https://img.shields.io/pypi/l/napari-correct-drift.svg?color=green)](https://github.com/sommerc/napari-correct-drift/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-correct-drift.svg?color=green)](https://pypi.org/project/napari-correct-drift) @@ -14104,8 +14874,8 @@ Distributed under the terms of the [BSD-3] license, ### Acknowledgment This project has been made possible in part by grant number NP2-0000000051 from the napari Plugin Foundations Grants (Cycle 2). -",text/markdown,https://github.com/sommerc/napari-correct-drift,Christoph Sommer,christoph.sommer@ist.ac.at,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['napari', 'numpy', 'qtpy', 'pandas', 'scikit-image', 'scipy', 'dask', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/sommerc/napari-correct-drift/issues', 'Documentation, https://github.com/sommerc/napari-correct-drift#README.md', 'Source Code, https://github.com/sommerc/napari-correct-drift', 'User Support, https://github.com/sommerc/napari-correct-drift/issues']",['testing'],False,0.0.2,conda-forge/napari-correct-drift/0.0.2,0.3.0,conda-forge/napari-correct-drift/0.3.0,0.4.0,conda-forge/napari-correct-drift/0.4.0,conda,noarch/napari-correct-drift-0.0.2-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['napari', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scipy']",pyh9208f05_0,1691106611399.0,None-any-None,noarch,2023-08-03 23:52:45.497000+00:00,1e4c9bcb92cdcd976bfa211a6fb88a40,612d3b32219e8d76b5113277cb39579030820fbb89a746fd837021bae26a1eba,21283.0,conda-forge/napari-correct-drift/0.0.2/noarch/napari-correct-drift-0.0.2-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-correct-drift/0.0.2/noarch/napari-correct-drift-0.0.2-pyh9208f05_0.conda,conda,0.0.2,conda-forge,['main'],conda,noarch/napari-correct-drift-0.3.0-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['dask-core', 'napari', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scipy']",noarch,1698094081684.0,None-any-None,pyh9208f05_0,2023-10-23 20:49:48.125000+00:00,4fc001cf394083f77978d6b1d8821b71,d02863e52c1126a17aea064d09b24f098a4cdfb053a5553a5ef9a628dcb77d31,22001.0,conda-forge/napari-correct-drift/0.3.0/noarch/napari-correct-drift-0.3.0-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-correct-drift/0.3.0/noarch/napari-correct-drift-0.3.0-pyh9208f05_0.conda,conda,0.3.0,conda-forge,['main'],conda,noarch/napari-correct-drift-0.4.0-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['dask-core', 'napari', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scipy']",BSD-3-Clause,python,1699313021121.0,2023-11-06 23:26:10.664000+00:00,d9635b8e31d6d7e2412a91d213c4da56,6dda7476a4b06a0acae9e2379a65332cb266fe1d6361b6ca95f5cda12ecbaea9,23334.0,conda-forge/napari-correct-drift/0.4.0/noarch/napari-correct-drift-0.4.0-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-correct-drift/0.4.0/noarch/napari-correct-drift-0.4.0-pyh9208f05_0.conda,conda,0.4.0,conda-forge,['main'],,napari-correct-drift.sample_3d,Sample Data 3D,napari_correct_drift._sample_data:sample_3d,napari-correct-drift.sample_3d_ch,Sample Data 3D + Channel,napari_correct_drift._sample_data:sample_3d_ch,napari-correct-drift.make_qwidget,Make CorrectDriftDock QWidget,napari_correct_drift._widget:CorrectDriftDock,napari-correct-drift.make_qwidget,Napari Correct Drift,False,,,,,,,,,,,,,,,,,,,,napari-correct-drift.sample_2d,unique_id.0,Synthetic Drift 2D,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-correct-drift.sample_3d,unique_id.1,Synthetic Drift 3D,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-correct-drift.sample_3d_ch,unique_id.2,Synthetic Drift 2D + Channel -134,napari-cosmos-ts,0.3.2,napari-cosmos-ts,napari plugin for colocalization single-molecule spectroscopy (CoSMoS) time series (TS) analysis,Marcel Goldschen-Ohm,,https://github.com/marcel-goldschen-ohm/napari-cosmos-ts,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-cosmos-ts.main_widget,Colocalization Single-Molecule Time Series,napari_cosmos_ts.main_widget:MainWidget,,,,2.1,napari-cosmos-ts,0.3.2,,napari plugin for colocalization single-molecule spectroscopy (CoSMoS) time series (TS) analysis,"# napari-cosmos-ts +",text/markdown,https://github.com/sommerc/napari-correct-drift,Christoph Sommer,christoph.sommer@ist.ac.at,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['napari', 'numpy', 'qtpy', 'pandas', 'scikit-image', 'scipy', 'dask', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/sommerc/napari-correct-drift/issues', 'Documentation, https://github.com/sommerc/napari-correct-drift#README.md', 'Source Code, https://github.com/sommerc/napari-correct-drift', 'User Support, https://github.com/sommerc/napari-correct-drift/issues']",['testing'],False,0.0.2,conda-forge/napari-correct-drift/0.0.2,0.3.0,conda-forge/napari-correct-drift/0.3.0,0.4.0,conda-forge/napari-correct-drift/0.4.0,conda,noarch/napari-correct-drift-0.0.2-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['napari', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scipy']",pyh9208f05_0,1691106611399.0,None-any-None,noarch,2023-08-03 23:52:45.497000+00:00,1e4c9bcb92cdcd976bfa211a6fb88a40,612d3b32219e8d76b5113277cb39579030820fbb89a746fd837021bae26a1eba,21283.0,conda-forge/napari-correct-drift/0.0.2/noarch/napari-correct-drift-0.0.2-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-correct-drift/0.0.2/noarch/napari-correct-drift-0.0.2-pyh9208f05_0.conda,conda,0.0.2,conda-forge,['main'],conda,noarch/napari-correct-drift-0.3.0-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['dask-core', 'napari', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scipy']",noarch,1698094081684.0,None-any-None,pyh9208f05_0,2023-10-23 20:49:48.125000+00:00,4fc001cf394083f77978d6b1d8821b71,d02863e52c1126a17aea064d09b24f098a4cdfb053a5553a5ef9a628dcb77d31,22001.0,conda-forge/napari-correct-drift/0.3.0/noarch/napari-correct-drift-0.3.0-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-correct-drift/0.3.0/noarch/napari-correct-drift-0.3.0-pyh9208f05_0.conda,conda,0.3.0,conda-forge,['main'],conda,noarch/napari-correct-drift-0.4.0-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['dask-core', 'napari', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scipy']",BSD-3-Clause,python,1699313021121.0,2023-11-06 23:26:10.664000+00:00,d9635b8e31d6d7e2412a91d213c4da56,6dda7476a4b06a0acae9e2379a65332cb266fe1d6361b6ca95f5cda12ecbaea9,23334.0,conda-forge/napari-correct-drift/0.4.0/noarch/napari-correct-drift-0.4.0-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-correct-drift/0.4.0/noarch/napari-correct-drift-0.4.0-pyh9208f05_0.conda,conda,0.4.0,conda-forge,['main'],,napari-correct-drift.sample_3d,Sample Data 3D,napari_correct_drift._sample_data:sample_3d,napari-correct-drift.sample_3d_ch,Sample Data 3D + Channel,napari_correct_drift._sample_data:sample_3d_ch,napari-correct-drift.make_qwidget,Make CorrectDriftDock QWidget,napari_correct_drift._widget:CorrectDriftDock,napari-correct-drift.make_qwidget,Napari Correct Drift,False,,,,,,,,,,,,,,,,,,,,napari-correct-drift.sample_2d,unique_id.0,Synthetic Drift 2D,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-correct-drift.sample_3d,unique_id.1,Synthetic Drift 3D,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-correct-drift.sample_3d_ch,unique_id.2,Synthetic Drift 2D + Channel +142,napari-cosmos-ts,0.3.6,napari-cosmos-ts,napari plugin for colocalization single-molecule spectroscopy (CoSMoS) time series (TS) analysis,Marcel Goldschen-Ohm,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-cosmos-ts.main_widget,Colocalization Single-Molecule Time Series,napari_cosmos_ts.main_widget:MainWidget,,,,2.1,napari-cosmos-ts,0.3.6,,napari plugin for colocalization single-molecule spectroscopy (CoSMoS) time series (TS) analysis,"# napari-cosmos-ts [napari](https://napari.org/stable/) plugin for colocalization single-molecule spectroscopy (CoSMoS) time series (TS) analysis. ![GitHub Tag](https://img.shields.io/github/v/tag/marcel-goldschen-ohm/napari-cosmos-ts?cacheSeconds=1) @@ -14168,8 +14938,8 @@ Or for the latest version of `napari-cosmos-ts`: pip install napari-cosmos-ts@git+https://github.com/marcel-goldschen-ohm/napari-cosmos-ts ``` *!!! Remember, every time you open a new command shell or terminal you will need to activate the virtual environment where you installed napari-cosmos-ts before [running the app](#run).* -",text/markdown,https://github.com/marcel-goldschen-ohm/napari-cosmos-ts,Marcel Goldschen-Ohm,Marcel Goldschen-Ohm ,,"['Development Status :: 4 - Beta', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: MIT License', 'Framework :: napari', 'Programming Language :: Python :: 3 :: Only']","['qtpy>=2.4.1', 'pyqtgraph>=0.13.4', 'pystackreg>=0.2.7', 'pycpd>=2.0.0', 'qtawesome>=1.3.1', 'h5py>=3.11.0']",>=3.10,"['Homepage, https://github.com/marcel-goldschen-ohm/napari-cosmos-ts', 'Repository, https://github.com/marcel-goldschen-ohm/napari-cosmos-ts']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-cosmos-ts.main_widget,Colocalization Single-Molecule Time Series,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -135,napari-cryoet-data-portal,0.4.1,CryoET Data Portal,"List, preview, and open data from the CZII CryoET Data Portal",Andy Sweet,MIT,https://github.com/chanzuckerberg/napari-cryoet-data-portal,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-cryoet-data-portal.DataPortalWidget,CryoET Data Portal,napari_cryoet_data_portal._widget:DataPortalWidget,napari-cryoet-data-portal.tomogram_ome_zarr_reader,['*.zarr'],True,2.1,napari-cryoet-data-portal,0.4.1,,"List, preview, and open data from the CZII CryoET Data Portal","# napari-cryoet-data-portal +",text/markdown,,Marcel Goldschen-Ohm,Marcel Goldschen-Ohm ,,"['Development Status :: 4 - Beta', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: MIT License', 'Framework :: napari', 'Programming Language :: Python :: 3 :: Only']","['numpy<2.1,>=2.0', 'qtpy>=2.4.1', 'pyqtgraph>=0.13.4', 'pystackreg>=0.2.7', 'pycpd>=2.0.0', 'qtawesome>=1.3.1', 'h5py>=3.11.0']",>=3.10,"['homepage, https://github.com/marcel-goldschen-ohm/napari-cosmos-ts', 'repository, https://github.com/marcel-goldschen-ohm/napari-cosmos-ts']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-cosmos-ts.main_widget,Colocalization Single-Molecule Time Series,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +143,napari-cryoet-data-portal,0.5.0,CryoET Data Portal,"List, preview, and open data from the CZII CryoET Data Portal",Andy Sweet,MIT,https://github.com/chanzuckerberg/napari-cryoet-data-portal,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-cryoet-data-portal.DataPortalWidget,CryoET Data Portal,napari_cryoet_data_portal._widget:DataPortalWidget,napari-cryoet-data-portal.tomogram_ome_zarr_reader,['*.zarr'],True,2.1,napari-cryoet-data-portal,0.5.0,,"List, preview, and open data from the CZII CryoET Data Portal","# napari-cryoet-data-portal [![MIT License](https://img.shields.io/pypi/l/napari-cryoet-data-portal.svg?color=green)](https://github.com/chanzuckerberg/napari-cryoet-data-portal/raw/main/LICENSE) [![Python package index](https://img.shields.io/pypi/v/napari-cryoet-data-portal.svg?color=green)](https://pypi.org/project/napari-cryoet-data-portal) @@ -14281,8 +15051,8 @@ This plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-na [open an issue]: https://github.com/chanzuckerberg/napari-cryoet-data-portal/issues [open a pull request]: https://github.com/chanzuckerberg/napari-cryoet-data-portal/pulls [latest napari installation instructions]: https://napari.org/stable/tutorials/fundamentals/installation.html#install-as-python-package-recommended -",text/markdown,https://github.com/chanzuckerberg/napari-cryoet-data-portal,Andy Sweet,andrewdsweet@gmail.com,MIT,"['Development Status :: 4 - Beta', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['cmap', 'cryoet-data-portal~=3.0', 'fsspec[http,s3]', 'npe2', 'numpy', 'napari>=0.4.19', 'napari-ome-zarr', 'ndjson', 'qtpy', 'superqt', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-mock; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.8,"['Bug Tracker, https://github.com/chanzuckerberg/napari-cryoet-data-portal/issues', 'Documentation, https://github.com/chanzuckerberg/napari-cryoet-data-portal#README.md', 'Source Code, https://github.com/chanzuckerberg/napari-cryoet-data-portal', 'User Support, https://github.com/chanzuckerberg/napari-cryoet-data-portal/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-cryoet-data-portal.tomogram_ome_zarr_reader,Read tomograms in the OME-Zarr format,napari_cryoet_data_portal._reader:tomogram_ome_zarr_reader,napari-cryoet-data-portal.points_annotations_reader,Read points annotations,napari_cryoet_data_portal._reader:points_annotations_reader,napari-cryoet-data-portal.tomogram_10000_ts_026,Tomogram 10000-TS_026,napari_cryoet_data_portal._sample_data:tomogram_10000_ts_026,napari-cryoet-data-portal.DataPortalWidget,CryoET Data Portal,False,,,,,,,,,,napari-cryoet-data-portal.tomogram_10000_ts_027,Tomogram 10000-TS_027,napari_cryoet_data_portal._sample_data:tomogram_10000_ts_027,,,,,,,,napari-cryoet-data-portal.tomogram_10000_ts_026,tomogram-10000-ts-026,Tomogram 10000-TS_026,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-cryoet-data-portal.tomogram_10000_ts_027,tomogram-10000-ts-027,Tomogram 10000-TS_027,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -136,napari-cryofibsem-imgpro,0.0.1,Cryo-FIB/SEM Image Post-Processing,A napari plugin for post-processing of Cryo-FIB/SEM image stacks,Shaina Vivienne To,"Apache License +",text/markdown,https://github.com/chanzuckerberg/napari-cryoet-data-portal,Andy Sweet,andrewdsweet@gmail.com,MIT,"['Development Status :: 4 - Beta', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['cmap', 'cryoet_data_portal~=4.0', 'fsspec[http,s3]', 'npe2', 'numpy', 'napari>=0.4.19', 'napari_ome_zarr', 'ndjson', 'qtpy', 'superqt', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-mock; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.8,"['Bug Tracker, https://github.com/chanzuckerberg/napari-cryoet-data-portal/issues', 'Documentation, https://github.com/chanzuckerberg/napari-cryoet-data-portal#README.md', 'Source Code, https://github.com/chanzuckerberg/napari-cryoet-data-portal', 'User Support, https://github.com/chanzuckerberg/napari-cryoet-data-portal/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-cryoet-data-portal.tomogram_ome_zarr_reader,Read tomograms in the OME-Zarr format,napari_cryoet_data_portal._reader:tomogram_ome_zarr_reader,napari-cryoet-data-portal.points_annotations_reader,Read points annotations,napari_cryoet_data_portal._reader:points_annotations_reader,napari-cryoet-data-portal.tomogram_10000_ts_026,Tomogram 10000-TS_026,napari_cryoet_data_portal._sample_data:tomogram_10000_ts_026,napari-cryoet-data-portal.DataPortalWidget,CryoET Data Portal,False,,,,,,,,,,napari-cryoet-data-portal.tomogram_10000_ts_027,Tomogram 10000-TS_027,napari_cryoet_data_portal._sample_data:tomogram_10000_ts_027,,,,,,,,napari-cryoet-data-portal.tomogram_10000_ts_026,tomogram-10000-ts-026,Tomogram 10000-TS_026,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-cryoet-data-portal.tomogram_10000_ts_027,tomogram-10000-ts-027,Tomogram 10000-TS_027,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +144,napari-cryofibsem-imgpro,0.0.1,Cryo-FIB/SEM Image Post-Processing,A napari plugin for post-processing of Cryo-FIB/SEM image stacks,Shaina Vivienne To,"Apache License Version 2.0, January 2004 http://www.apache.org/licenses/ @@ -14760,8 +15530,8 @@ This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookie WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. -","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', 'PyWavelets', 'opencv-python', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.10,"['Bug Tracker, https://github.com/shainatorumc/napari-cryofibsem-imgpro/issues', 'Documentation, https://github.com/shainatorumc/napari-cryofibsem-imgpro#README.md', 'Source Code, https://github.com/shainatorumc/napari-cryofibsem-imgpro', 'User Support, https://github.com/shainatorumc/napari-cryofibsem-imgpro/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",napari-cryofibsem-imgpro.write_multiple,Save multi-layer data with Cryo-FIB/SEM Image Post-Processing,napari_cryofibsem_imgpro._writer:write_multiple,napari-cryofibsem-imgpro.write_single_image,Save image data with Cryo-FIB/SEM Image Post-Processing,napari_cryofibsem_imgpro._writer:write_single_image,napari-cryofibsem-imgpro.make_sample_data,Load sample data from Cryo-FIB/SEM Image Post-Processing,napari_cryofibsem_imgpro._sample_data:make_sample_data,napari-cryofibsem-imgpro.make_decurtain_widget,Decurtaining,False,napari-cryofibsem-imgpro.make_decharge_widget,Decharging,False,napari-cryofibsem-imgpro.make_denoise_widget,Denoising,False,napari-cryofibsem-imgpro.make_contrast_widget,Enhancing Contrast,False,napari-cryofibsem-imgpro.make_decurtain_widget,Make decurtain widget,napari_cryofibsem_imgpro:decurtain,napari-cryofibsem-imgpro.write_multiple,"['image*', 'labels*']",,napari-cryofibsem-imgpro.write_single_image,['image'],['.npy'],,napari-cryofibsem-imgpro.make_sample_data,unique_id.1,Cryo-FIB/SEM Image Post-Processing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-cryofibsem-imgpro.make_decharge_widget,Make decharge widget,napari_cryofibsem_imgpro:decharge,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-cryofibsem-imgpro.make_denoise_widget,Make denoise widget,napari_cryofibsem_imgpro:denoise,napari-cryofibsem-imgpro.make_contrast_widget,Make contrast widget,napari_cryofibsem_imgpro:contrast,napari-cryofibsem-imgpro.make_brightness_widget,Make brightness widget,napari_cryofibsem_imgpro:brightness,,,,,,,,,,,napari-cryofibsem-imgpro.make_brightness_widget,Correcting Brightness,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -137,napari-cryofibsem-imgproc,0.0.1,Cryo-FIB/SEM Image Stacks Post-Processing,"A napari plugin for artifact removal, noise reduction, contrast enhancement and stack brightness correction of Cryo-FIB/SEM image stacks.",Shaina V. To," +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', 'PyWavelets', 'opencv-python', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.10,"['Bug Tracker, https://github.com/shainatorumc/napari-cryofibsem-imgpro/issues', 'Documentation, https://github.com/shainatorumc/napari-cryofibsem-imgpro#README.md', 'Source Code, https://github.com/shainatorumc/napari-cryofibsem-imgpro', 'User Support, https://github.com/shainatorumc/napari-cryofibsem-imgpro/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",napari-cryofibsem-imgpro.write_multiple,Save multi-layer data with Cryo-FIB/SEM Image Post-Processing,napari_cryofibsem_imgpro._writer:write_multiple,napari-cryofibsem-imgpro.write_single_image,Save image data with Cryo-FIB/SEM Image Post-Processing,napari_cryofibsem_imgpro._writer:write_single_image,napari-cryofibsem-imgpro.make_sample_data,Load sample data from Cryo-FIB/SEM Image Post-Processing,napari_cryofibsem_imgpro._sample_data:make_sample_data,napari-cryofibsem-imgpro.make_decurtain_widget,Decurtaining,False,napari-cryofibsem-imgpro.make_decharge_widget,Decharging,False,napari-cryofibsem-imgpro.make_denoise_widget,Denoising,False,napari-cryofibsem-imgpro.make_contrast_widget,Enhancing Contrast,False,napari-cryofibsem-imgpro.make_decurtain_widget,Make decurtain widget,napari_cryofibsem_imgpro:decurtain,napari-cryofibsem-imgpro.write_multiple,"['image*', 'labels*']",,napari-cryofibsem-imgpro.write_single_image,['image'],['.npy'],,napari-cryofibsem-imgpro.make_sample_data,unique_id.1,Cryo-FIB/SEM Image Post-Processing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-cryofibsem-imgpro.make_decharge_widget,Make decharge widget,napari_cryofibsem_imgpro:decharge,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-cryofibsem-imgpro.make_denoise_widget,Make denoise widget,napari_cryofibsem_imgpro:denoise,napari-cryofibsem-imgpro.make_contrast_widget,Make contrast widget,napari_cryofibsem_imgpro:contrast,napari-cryofibsem-imgpro.make_brightness_widget,Make brightness widget,napari_cryofibsem_imgpro:brightness,,,,,,,,napari-cryofibsem-imgpro.make_brightness_widget,Correcting Brightness,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +145,napari-cryofibsem-imgproc,0.0.3,Cryo-FIB/SEM Image Stacks Post-Processing,"A napari plugin for artifact removal, noise reduction, contrast enhancement and stack brightness correction of Cryo-FIB/SEM image stacks.",Shaina V. To," Apache License Version 2.0, January 2004 http://www.apache.org/licenses/ @@ -14963,7 +15733,7 @@ distributed under the License is distributed on an ""AS IS"" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. -",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-cryofibsem-imgproc.make_sample_data,Load sample data from Cryo-FIB/SEM Image Stacks Post-Processing,napari_cryofibsem_imgproc._sample_data:make_sample_data,,,,2.1,napari-cryofibsem-imgproc,0.0.1,,"A napari plugin for artifact removal, noise reduction, contrast enhancement and stack brightness correction of Cryo-FIB/SEM image stacks.","# napari-cryofibsem-imgproc +",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-cryofibsem-imgproc.make_sample_data,Load sample data from Cryo-FIB/SEM Image Stacks Post-Processing,napari_cryofibsem_imgproc._sample_data:make_sample_data,,,,2.1,napari-cryofibsem-imgproc,0.0.3,,"A napari plugin for artifact removal, noise reduction, contrast enhancement and stack brightness correction of Cryo-FIB/SEM image stacks.","# napari-cryofibsem-imgproc [![License Apache Software License 2.0](https://img.shields.io/pypi/l/napari-cryofibsem-imgproc.svg?color=green)](https://github.com/EMCRUMC/napari-cryofibsem-imgproc/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-cryofibsem-imgproc.svg?color=green)](https://pypi.org/project/napari-cryofibsem-imgproc) @@ -14990,7 +15760,7 @@ https://napari.org/stable/plugins/index.html It is recommended to create a fresh [conda] environment with Python 3.12 and napari: - conda create -n imgpro_env -c conda-forge python=3.12.0 napari pyqt + conda create -n imgproc-env -c conda-forge python=3.12.0 napari pyqt You can install `napari-cryofibsem-imgproc` via [pip]: @@ -15238,8 +16008,8 @@ distributed under the License is distributed on an ""AS IS"" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. -","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy==1.26.4', 'magicgui', 'scikit-image==0.24.0', 'PyWavelets==1.6.0', 'opencv-python==4.10.0.84', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.10,"['Bug Tracker, https://github.com/EMCRUMC/napari-cryofibsem-imgproc/issues', 'Documentation, https://github.com/EMCRUMC/napari-cryofibsem-imgproc#README.md', 'Source Code, https://github.com/EMCRUMC/napari-cryofibsem-imgproc', 'User Support, https://github.com/EMCRUMC/napari-cryofibsem-imgproc/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-cryofibsem-imgproc.make_decurtain_widget,Make decurtain widget,napari_cryofibsem_imgproc:decurtain,napari-cryofibsem-imgproc.make_decharge_widget,Make decharge widget,napari_cryofibsem_imgproc:decharge,napari-cryofibsem-imgproc.make_denoise_widget,Make denoise widget,napari_cryofibsem_imgproc:denoise,napari-cryofibsem-imgproc.make_decurtain_widget,Decurtaining,False,napari-cryofibsem-imgproc.make_decharge_widget,Decharging,False,napari-cryofibsem-imgproc.make_denoise_widget,Denoising,False,napari-cryofibsem-imgproc.make_contrast_widget,Enhancing Contrast,False,napari-cryofibsem-imgproc.make_contrast_widget,Make contrast widget,napari_cryofibsem_imgproc:contrast,,,,,,,,napari-cryofibsem-imgproc.make_sample_data,unique_id.1,Cryo-FIB/SEM Image Stacks Post-Processing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-cryofibsem-imgproc.make_brightness_widget,Make brightness widget,napari_cryofibsem_imgproc:brightness,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-cryofibsem-imgproc.make_brightness_widget,Correcting Brightness,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -138,napari-cryofibsem-monitor,0.0.3,napari-cryofibsem-monitor,A plugin to monitor the creation of lamella using AutoTEM on a TFS Acquilos instrument,Johannes Elferich,MIT,https://github.com/jojoelfe/napari-cryofibsem-monitor,61f54f348d5f589364a19f52,['conda'],,https://github.com/jojoelfe/napari-cryofibsem-monitor,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-cryofibsem-monitor,http://api.anaconda.org/packages/conda-forge/napari-cryofibsem-monitor,http://anaconda.org/conda-forge/napari-cryofibsem-monitor,"['0.0.1', '0.0.3']",0.0.3,0.0.3,['noarch'],4.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-cryofibsem-monitor/0.0.1,1.0,0.0,2022-01-29 14:29:05.393000+00:00,2023-06-18 08:40:39.385000+00:00,conda,noarch/napari-cryofibsem-monitor-0.0.1-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['imreg_dft', 'matplotlib-base', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'tifffile']",noarch,1643466390151.0,None-any-None,pyhd8ed1ab_0,2022-01-29 14:29:06.518000+00:00,7f5087748132b3b1dca8ed79928c0d0e,None,10172.0,conda-forge/napari-cryofibsem-monitor/0.0.1/noarch/napari-cryofibsem-monitor-0.0.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-cryofibsem-monitor/0.0.1/noarch/napari-cryofibsem-monitor-0.0.1-pyhd8ed1ab_0.tar.bz2,conda,0.0.1,conda-forge,['main'],public,,0.1.0,napari-cryofibsem-monitor.ExampleQWidget,Monitor,napari_cryofibsem_monitor._dock_widget:ExampleQWidget,,,,2.1,napari-cryofibsem-monitor,0.0.3,,A plugin to monitor the creation of lamella using AutoTEM on a TFS Acquilos instrument,"# napari-cryofibsem-monitor +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy==1.26.4', 'magicgui', 'scikit-image==0.24.0', 'PyWavelets==1.6.0', 'opencv-python==4.10.0.84', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.10,"['Bug Tracker, https://github.com/EMCRUMC/napari-cryofibsem-imgproc/issues', 'Documentation, https://github.com/EMCRUMC/napari-cryofibsem-imgproc#README.md', 'Source Code, https://github.com/EMCRUMC/napari-cryofibsem-imgproc', 'User Support, https://github.com/EMCRUMC/napari-cryofibsem-imgproc/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-cryofibsem-imgproc.make_decurtain_widget,Make decurtain widget,napari_cryofibsem_imgproc:decurtain,napari-cryofibsem-imgproc.make_decharge_widget,Make decharge widget,napari_cryofibsem_imgproc:decharge,napari-cryofibsem-imgproc.make_denoise_widget,Make denoise widget,napari_cryofibsem_imgproc:denoise,napari-cryofibsem-imgproc.make_decurtain_widget,Decurtaining,False,napari-cryofibsem-imgproc.make_decharge_widget,Decharging,False,napari-cryofibsem-imgproc.make_denoise_widget,Denoising,False,napari-cryofibsem-imgproc.make_contrast_widget,Enhancing Contrast,False,napari-cryofibsem-imgproc.make_contrast_widget,Make contrast widget,napari_cryofibsem_imgproc:contrast,,,,,,,,napari-cryofibsem-imgproc.make_sample_data,unique_id.1,Cryo-FIB/SEM Image Stacks Post-Processing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-cryofibsem-imgproc.make_brightness_widget,Make brightness widget,napari_cryofibsem_imgproc:brightness,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-cryofibsem-imgproc.make_brightness_widget,Correcting Brightness,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +146,napari-cryofibsem-monitor,0.0.3,napari-cryofibsem-monitor,A plugin to monitor the creation of lamella using AutoTEM on a TFS Acquilos instrument,Johannes Elferich,MIT,https://github.com/jojoelfe/napari-cryofibsem-monitor,61f54f348d5f589364a19f52,['conda'],,https://github.com/jojoelfe/napari-cryofibsem-monitor,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-cryofibsem-monitor,http://api.anaconda.org/packages/conda-forge/napari-cryofibsem-monitor,http://anaconda.org/conda-forge/napari-cryofibsem-monitor,"['0.0.1', '0.0.3']",0.0.3,0.0.3,['noarch'],4.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-cryofibsem-monitor/0.0.1,1.0,0.0,2022-01-29 14:29:05.393000+00:00,2023-06-18 08:40:39.385000+00:00,conda,noarch/napari-cryofibsem-monitor-0.0.1-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['imreg_dft', 'matplotlib-base', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'tifffile']",noarch,1643466390151.0,None-any-None,pyhd8ed1ab_0,2022-01-29 14:29:06.518000+00:00,7f5087748132b3b1dca8ed79928c0d0e,None,10172.0,conda-forge/napari-cryofibsem-monitor/0.0.1/noarch/napari-cryofibsem-monitor-0.0.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-cryofibsem-monitor/0.0.1/noarch/napari-cryofibsem-monitor-0.0.1-pyhd8ed1ab_0.tar.bz2,conda,0.0.1,conda-forge,['main'],public,,0.1.0,napari-cryofibsem-monitor.ExampleQWidget,Monitor,napari_cryofibsem_monitor._dock_widget:ExampleQWidget,,,,2.1,napari-cryofibsem-monitor,0.0.3,,A plugin to monitor the creation of lamella using AutoTEM on a TFS Acquilos instrument,"# napari-cryofibsem-monitor [![License](https://img.shields.io/pypi/l/napari-cryofibsem-monitor.svg?color=green)](https://github.com/jojoelfe/napari-cryofibsem-monitor/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-cryofibsem-monitor.svg?color=green)](https://pypi.org/project/napari-cryofibsem-monitor) @@ -15316,8 +16086,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/jojoelfe/napari-cryofibsem-monitor,Johannes Elferich,jojotux123@hotmail.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'tifffile', 'imreg-dft', 'matplotlib']",>=3.7,"['Bug Tracker, https://github.com/jojoelfe/napari-cryofibsem-monitor/issues', 'Documentation, https://github.com/jojoelfe/napari-cryofibsem-monitor#README.md', 'Source Code, https://github.com/jojoelfe/napari-cryofibsem-monitor', 'User Support, https://github.com/jojoelfe/napari-cryofibsem-monitor/issues']",,False,0.0.3,conda-forge/napari-cryofibsem-monitor/0.0.3,,,,,conda,noarch/napari-cryofibsem-monitor-0.0.3-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['imreg_dft', 'matplotlib-base', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'tifffile']",pyhd8ed1ab_0,1668537349214.0,None-any-None,noarch,2022-11-15 18:38:21.991000+00:00,d96541ea9bb9c1b094b96e1cd2acad48,None,11690.0,conda-forge/napari-cryofibsem-monitor/0.0.3/noarch/napari-cryofibsem-monitor-0.0.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-cryofibsem-monitor/0.0.3/noarch/napari-cryofibsem-monitor-0.0.3-pyhd8ed1ab_0.tar.bz2,conda,0.0.3,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-cryofibsem-monitor.ExampleQWidget,Monitor,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -139,napari-ctc-io,0.2.0,Open/write CTC data format,Drag and drop annotations/results in the Cell Tracking Challenge (CTC) format into napari.,Benjamin Gallusser,BSD-3-Clause,https://github.com/bentaculum/napari-ctc-io,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-ctc-io.read_ctc,Open CTC TRA/RES data,napari_ctc_io._reader:napari_get_reader,napari-ctc-io.read_ctc,"['TRA', '*RES']",True,2.1,napari-ctc-io,0.2.0,,Drag and drop annotations/results in the Cell Tracking Challenge (CTC) format into napari.,"# napari-ctc-io +",text/markdown,https://github.com/jojoelfe/napari-cryofibsem-monitor,Johannes Elferich,jojotux123@hotmail.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'tifffile', 'imreg-dft', 'matplotlib']",>=3.7,"['Bug Tracker, https://github.com/jojoelfe/napari-cryofibsem-monitor/issues', 'Documentation, https://github.com/jojoelfe/napari-cryofibsem-monitor#README.md', 'Source Code, https://github.com/jojoelfe/napari-cryofibsem-monitor', 'User Support, https://github.com/jojoelfe/napari-cryofibsem-monitor/issues']",,False,0.0.3,conda-forge/napari-cryofibsem-monitor/0.0.3,,,,,conda,noarch/napari-cryofibsem-monitor-0.0.3-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['imreg_dft', 'matplotlib-base', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'tifffile']",pyhd8ed1ab_0,1668537349214.0,None-any-None,noarch,2022-11-15 18:38:21.991000+00:00,d96541ea9bb9c1b094b96e1cd2acad48,None,11690.0,conda-forge/napari-cryofibsem-monitor/0.0.3/noarch/napari-cryofibsem-monitor-0.0.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-cryofibsem-monitor/0.0.3/noarch/napari-cryofibsem-monitor-0.0.3-pyhd8ed1ab_0.tar.bz2,conda,0.0.3,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-cryofibsem-monitor.ExampleQWidget,Monitor,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +147,napari-ctc-io,0.2.1,Read CTC format,Drag and drop/write tracks from/to the Cell Tracking Challenge (CTC) format.,Benjamin Gallusser,BSD-3-Clause,https://github.com/bentaculum/napari-ctc-io,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-ctc-io.read_ctc,Open CTC TRA/RES data,napari_ctc_io._reader:napari_get_reader,napari-ctc-io.read_ctc,"['TRA', '*RES']",True,2.1,napari-ctc-io,0.2.1,,Drag and drop/write tracks from/to the Cell Tracking Challenge (CTC) format.,"# napari-ctc-io [![PyPI](https://img.shields.io/pypi/v/napari-ctc-io.svg?color=green)](https://pypi.org/project/napari-ctc-io) [![tests](https://github.com/bentaculum/napari-ctc-io/workflows/tests/badge.svg)](https://github.com/bentaculum/napari-ctc-io/actions) @@ -15401,8 +16171,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/bentaculum/napari-ctc-io,Benjamin Gallusser,benjamin.gallusser@epfl.ch,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Framework :: napari', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']","['napari', 'numpy', 'scikit-image', 'tifffile', 'pandas', 'imagecodecs', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.9,"['Bug Tracker, https://github.com/bentaculum/napari-ctc-io/issues', 'Documentation, https://github.com/bentaculum/napari-ctc-io#README.md', 'Source Code, https://github.com/bentaculum/napari-ctc-io', 'User Support, https://github.com/bentaculum/napari-ctc-io/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Visualization', 'Utilities']",napari-ctc-io.write_multiple,Save masks + tracks to CTC format,napari_ctc_io._writer:write_multiple,,,,,,,,,,,,,,,,,,,,,,napari-ctc-io.write_multiple,"['labels', 'tracks']",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -140,napari-cupy-image-processing,0.4.1,napari-cupy-image-processing,GPU-accelerated image processing using CUDA,Robert Haase,MIT,https://github.com/haesleinhuepf/napari-cupy-image-processing,620643c646456342396b2892,['conda'],,https://github.com/haesleinhuepf/napari-cupy-image-processing,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-cupy-image-processing,http://api.anaconda.org/packages/conda-forge/napari-cupy-image-processing,http://anaconda.org/conda-forge/napari-cupy-image-processing,"['0.1.9', '0.2.0', '0.2.1', '0.2.2', '0.2.3', '0.3.0', '0.3.1', '0.4.1']",0.3.1,0.4.1,['noarch'],10.0,,['pyhd8ed1ab_0'],0.1.9,conda-forge/napari-cupy-image-processing/0.1.9,1.0,0.0,2022-02-11 11:08:51.388000+00:00,2023-08-17 13:53:30.303000+00:00,conda,noarch/napari-cupy-image-processing-0.1.9-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['cupy', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'scikit-image', 'toolz']",noarch,1644577447776.0,None-any-None,pyhd8ed1ab_0,2022-02-11 11:08:51.940000+00:00,38a075324de5c919fd20cc077e96851e,None,11667.0,conda-forge/napari-cupy-image-processing/0.1.9/noarch/napari-cupy-image-processing-0.1.9-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-cupy-image-processing/0.1.9/noarch/napari-cupy-image-processing-0.1.9-pyhd8ed1ab_0.tar.bz2,conda,0.1.9,conda-forge,['main'],public,,0.2.1,napari-cupy-image-processing.napari_experimental_provide_function,gaussian_filter,napari_cupy_image_processing._cupy_image_processing:gaussian_filter,,,,2.1,napari-cupy-image-processing,0.4.1,,GPU-accelerated image processing using CUDA,"# napari-cupy-image-processing +",text/markdown,https://github.com/bentaculum/napari-ctc-io,Benjamin Gallusser,benjamin.gallusser@epfl.ch,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Framework :: napari', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']","['napari', 'numpy', 'scikit-image', 'tifffile', 'pandas', 'imagecodecs', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""']",>=3.9,"['Bug Tracker, https://github.com/bentaculum/napari-ctc-io/issues', 'Documentation, https://github.com/bentaculum/napari-ctc-io#README.md', 'Source Code, https://github.com/bentaculum/napari-ctc-io', 'User Support, https://github.com/bentaculum/napari-ctc-io/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Visualization', 'Utilities']",napari-ctc-io.write_multiple,Save masks + tracks to CTC format,napari_ctc_io._writer:write_multiple,,,,,,,,,,,,,,,,,,,,,,napari-ctc-io.write_multiple,"['labels', 'tracks']",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +148,napari-cupy-image-processing,0.4.1,napari-cupy-image-processing,GPU-accelerated image processing using CUDA,Robert Haase,MIT,https://github.com/haesleinhuepf/napari-cupy-image-processing,620643c646456342396b2892,['conda'],,https://github.com/haesleinhuepf/napari-cupy-image-processing,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-cupy-image-processing,http://api.anaconda.org/packages/conda-forge/napari-cupy-image-processing,http://anaconda.org/conda-forge/napari-cupy-image-processing,"['0.1.9', '0.2.0', '0.2.1', '0.2.2', '0.2.3', '0.3.0', '0.3.1', '0.4.1']",0.3.1,0.4.1,['noarch'],10.0,,['pyhd8ed1ab_0'],0.1.9,conda-forge/napari-cupy-image-processing/0.1.9,1.0,0.0,2022-02-11 11:08:51.388000+00:00,2023-08-17 13:53:30.303000+00:00,conda,noarch/napari-cupy-image-processing-0.1.9-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['cupy', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'scikit-image', 'toolz']",noarch,1644577447776.0,None-any-None,pyhd8ed1ab_0,2022-02-11 11:08:51.940000+00:00,38a075324de5c919fd20cc077e96851e,None,11667.0,conda-forge/napari-cupy-image-processing/0.1.9/noarch/napari-cupy-image-processing-0.1.9-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-cupy-image-processing/0.1.9/noarch/napari-cupy-image-processing-0.1.9-pyhd8ed1ab_0.tar.bz2,conda,0.1.9,conda-forge,['main'],public,,0.2.1,napari-cupy-image-processing.napari_experimental_provide_function,gaussian_filter,napari_cupy_image_processing._cupy_image_processing:gaussian_filter,,,,2.1,napari-cupy-image-processing,0.4.1,,GPU-accelerated image processing using CUDA,"# napari-cupy-image-processing [![License](https://img.shields.io/pypi/l/napari-cupy-image-processing.svg?color=green)](https://github.com/haesleinhuepf/napari-cupy-image-processing/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-cupy-image-processing.svg?color=green)](https://pypi.org/project/napari-cupy-image-processing) @@ -15484,8 +16254,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/haesleinhuepf/napari-cupy-image-processing,Robert Haase,robert.haase@tu-dresden.de,MIT,"['Development Status :: 3 - Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['napari-plugin-engine >=0.1.4', 'numpy', 'toolz', 'cupy', 'napari-tools-menu', 'scikit-image', 'napari-time-slicer >=0.4.8', 'napari-skimage-regionprops', 'napari-assistant', 'stackview >=0.3.2']",>=3.7,"['Bug Tracker, https://github.com/haesleinhuepf/napari-cupy-image-processing/issues', 'Documentation, https://github.com/haesleinhuepf/napari-cupy-image-processing#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-cupy-image-processing', 'User Support, https://github.com/haesleinhuepf/napari-cupy-image-processing/issues']",,True,0.2.0,conda-forge/napari-cupy-image-processing/0.2.0,0.2.1,conda-forge/napari-cupy-image-processing/0.2.1,0.2.2,conda-forge/napari-cupy-image-processing/0.2.2,conda,noarch/napari-cupy-image-processing-0.2.0-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['cupy', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'scikit-image', 'toolz']",pyhd8ed1ab_0,1646823861027.0,None-any-None,noarch,2022-03-09 11:09:03.214000+00:00,1248ed540826e2f218c254460cc3c520,None,11740.0,conda-forge/napari-cupy-image-processing/0.2.0/noarch/napari-cupy-image-processing-0.2.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-cupy-image-processing/0.2.0/noarch/napari-cupy-image-processing-0.2.0-pyhd8ed1ab_0.tar.bz2,conda,0.2.0,conda-forge,['main'],conda,noarch/napari-cupy-image-processing-0.2.1-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['cupy', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'scikit-image', 'toolz']",noarch,1647808727455.0,None-any-None,pyhd8ed1ab_0,2022-03-20 20:44:07.565000+00:00,53dbc3c1f5696df34103119354c8bc5f,None,11888.0,conda-forge/napari-cupy-image-processing/0.2.1/noarch/napari-cupy-image-processing-0.2.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-cupy-image-processing/0.2.1/noarch/napari-cupy-image-processing-0.2.1-pyhd8ed1ab_0.tar.bz2,conda,0.2.1,conda-forge,['main'],conda,noarch/napari-cupy-image-processing-0.2.2-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['cupy', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'scikit-image', 'toolz']",MIT,python,1647817663013.0,2022-03-20 23:12:09.749000+00:00,e28b6542be8ca3d0f2eb165d327baa60,None,11884.0,conda-forge/napari-cupy-image-processing/0.2.2/noarch/napari-cupy-image-processing-0.2.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-cupy-image-processing/0.2.2/noarch/napari-cupy-image-processing-0.2.2-pyhd8ed1ab_0.tar.bz2,conda,0.2.2,conda-forge,['main'],,napari-cupy-image-processing.napari_experimental_provide_function,gaussian_laplace,napari_cupy_image_processing._cupy_image_processing:gaussian_laplace,napari-cupy-image-processing.napari_experimental_provide_function,median_filter,napari_cupy_image_processing._cupy_image_processing:median_filter,napari-cupy-image-processing.napari_experimental_provide_function,percentile_filter,napari_cupy_image_processing._cupy_image_processing:percentile_filter,napari-cupy-image-processing.napari_experimental_provide_function,gaussian_filter,True,napari-cupy-image-processing.napari_experimental_provide_function,gaussian_laplace,True,napari-cupy-image-processing.napari_experimental_provide_function,median_filter,True,napari-cupy-image-processing.napari_experimental_provide_function,percentile_filter,True,napari-cupy-image-processing.napari_experimental_provide_function,white_tophat,napari_cupy_image_processing._cupy_image_processing:white_tophat,,,,,,,,,,,0.2.3,conda-forge/napari-cupy-image-processing/0.2.3,0.3.0,conda-forge/napari-cupy-image-processing/0.3.0,0.3.1,conda-forge/napari-cupy-image-processing/0.3.1,conda,noarch/napari-cupy-image-processing-0.2.3-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['cupy', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'scikit-image', 'toolz']",noarch,1652030276481.0,None-any-None,pyhd8ed1ab_0,2022-05-08 17:22:05.356000+00:00,ad6ac859539d4301f36400955ab348f1,None,12011.0,conda-forge/napari-cupy-image-processing/0.2.3/noarch/napari-cupy-image-processing-0.2.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-cupy-image-processing/0.2.3/noarch/napari-cupy-image-processing-0.2.3-pyhd8ed1ab_0.tar.bz2,conda,0.2.3,conda-forge,['main'],conda,noarch/napari-cupy-image-processing-0.3.0-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['cupy', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'scikit-image', 'toolz']",noarch,1657459562101.0,None-any-None,pyhd8ed1ab_0,2022-07-10 13:30:35.139000+00:00,38dd732c1f4918d7c07bce87f10d51b7,None,13634.0,conda-forge/napari-cupy-image-processing/0.3.0/noarch/napari-cupy-image-processing-0.3.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-cupy-image-processing/0.3.0/noarch/napari-cupy-image-processing-0.3.0-pyhd8ed1ab_0.tar.bz2,conda,0.3.0,conda-forge,['main'],conda,noarch/napari-cupy-image-processing-0.3.1-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['cupy', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops', 'napari-time-slicer', 'napari-tools-menu >=0.1.17', 'numpy', 'python >=3.7', 'scikit-image', 'stackview >=0.3.2', 'toolz']",MIT,python,1661704404464.0,2022-08-28 16:37:33.472000+00:00,213e54ba8bf54b9ebdf6975c8fc348da,None,13705.0,conda-forge/napari-cupy-image-processing/0.3.1/noarch/napari-cupy-image-processing-0.3.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-cupy-image-processing/0.3.1/noarch/napari-cupy-image-processing-0.3.1-pyhd8ed1ab_0.tar.bz2,conda,0.3.1,conda-forge,['main'],,,,napari-cupy-image-processing.napari_experimental_provide_function,morphological_gradient,napari_cupy_image_processing._cupy_image_processing:morphological_gradient,0.4.1,conda-forge/napari-cupy-image-processing/0.4.1,,,conda,noarch/napari-cupy-image-processing-0.4.1-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['cupy', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops', 'napari-time-slicer', 'napari-tools-menu >=0.1.17', 'numpy', 'python >=3.7', 'scikit-image', 'stackview >=0.3.2', 'toolz']",noarch,1692280281771.0,None-any-None,pyhd8ed1ab_0,2023-08-17 13:53:28.567000+00:00,dba5f49a0f0dbc2b48392cbb01726067,e4de6a5527dfee4f30b7551727469f7a1775381a3701c03ff4873aa4689a5bdc,15113.0,conda-forge/napari-cupy-image-processing/0.4.1/noarch/napari-cupy-image-processing-0.4.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-cupy-image-processing/0.4.1/noarch/napari-cupy-image-processing-0.4.1-pyhd8ed1ab_0.conda,conda,0.4.1,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,napari-cupy-image-processing.napari_experimental_provide_function,morphological_laplace,napari_cupy_image_processing._cupy_image_processing:morphological_laplace,napari-cupy-image-processing.napari_experimental_provide_function,wiener,napari_cupy_image_processing._cupy_image_processing:wiener,napari-cupy-image-processing.napari_experimental_provide_function,threshold_otsu,napari_cupy_image_processing._cupy_image_processing:threshold_otsu,napari-cupy-image-processing.napari_experimental_provide_function,binary_fill_holes,napari_cupy_image_processing._cupy_image_processing:binary_fill_holes,napari-cupy-image-processing.napari_experimental_provide_function,label,napari_cupy_image_processing._cupy_image_processing:label,napari-cupy-image-processing.napari_experimental_provide_function,black_tophat,napari_cupy_image_processing._cupy_image_processing:black_tophat,,napari-cupy-image-processing.napari_experimental_provide_function,white_tophat,True,napari-cupy-image-processing.napari_experimental_provide_function,morphological_gradient,True,napari-cupy-image-processing.napari_experimental_provide_function,morphological_laplace,True,napari-cupy-image-processing.napari_experimental_provide_function,wiener,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -141,napari-cursor-tracker,0.1.3,Cursor tracker,Plugin for easy manual annotation/tracking of 3D or 2D + t dataset by following the cursor.,Florian Aymanns,BSD-3-Clause,https://github.com/faymanns/napari-cursor-tracker,653e741d29d410386f8de676,['conda'],,https://pypi.org/project/napari-cursor-tracker,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-cursor-tracker,http://api.anaconda.org/packages/conda-forge/napari-cursor-tracker,http://anaconda.org/conda-forge/napari-cursor-tracker,['0.1.3'],0.1.3,0.1.3,['noarch'],3.0,https://github.com/faymanns/napari-cursor-tracker,['pyh9208f05_0'],0.1.3,conda-forge/napari-cursor-tracker/0.1.3,1.0,0.0,2023-10-29 15:02:50.357000+00:00,2023-10-29 15:02:53.300000+00:00,conda,noarch/napari-cursor-tracker-0.1.3-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy']",noarch,1698591641598.0,None-any-None,pyh9208f05_0,2023-10-29 15:02:50.784000+00:00,a026402bea7d95e33a58bf5c44aaa010,945917d55161abe8fc07decb8d81ff207bc0ff66158cbfc660e9a25a127bc798,15399.0,conda-forge/napari-cursor-tracker/0.1.3/noarch/napari-cursor-tracker-0.1.3-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-cursor-tracker/0.1.3/noarch/napari-cursor-tracker-0.1.3-pyh9208f05_0.conda,conda,0.1.3,conda-forge,['main'],public,,0.2.1,napari-cursor-tracker.make_sample_data,Load sample data from Cursor tracker,napari_cursor_tracker._sample_data:make_sample_data,,,,2.1,napari-cursor-tracker,0.1.3,,Plugin for easy manual annotation/tracking of 3D or 2D + t dataset by following the cursor.,"# napari-cursor-tracker +",text/markdown,https://github.com/haesleinhuepf/napari-cupy-image-processing,Robert Haase,robert.haase@tu-dresden.de,MIT,"['Development Status :: 3 - Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['napari-plugin-engine >=0.1.4', 'numpy', 'toolz', 'cupy', 'napari-tools-menu', 'scikit-image', 'napari-time-slicer >=0.4.8', 'napari-skimage-regionprops', 'napari-assistant', 'stackview >=0.3.2']",>=3.7,"['Bug Tracker, https://github.com/haesleinhuepf/napari-cupy-image-processing/issues', 'Documentation, https://github.com/haesleinhuepf/napari-cupy-image-processing#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-cupy-image-processing', 'User Support, https://github.com/haesleinhuepf/napari-cupy-image-processing/issues']",,True,0.2.0,conda-forge/napari-cupy-image-processing/0.2.0,0.2.1,conda-forge/napari-cupy-image-processing/0.2.1,0.2.2,conda-forge/napari-cupy-image-processing/0.2.2,conda,noarch/napari-cupy-image-processing-0.2.0-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['cupy', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'scikit-image', 'toolz']",pyhd8ed1ab_0,1646823861027.0,None-any-None,noarch,2022-03-09 11:09:03.214000+00:00,1248ed540826e2f218c254460cc3c520,None,11740.0,conda-forge/napari-cupy-image-processing/0.2.0/noarch/napari-cupy-image-processing-0.2.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-cupy-image-processing/0.2.0/noarch/napari-cupy-image-processing-0.2.0-pyhd8ed1ab_0.tar.bz2,conda,0.2.0,conda-forge,['main'],conda,noarch/napari-cupy-image-processing-0.2.1-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['cupy', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'scikit-image', 'toolz']",noarch,1647808727455.0,None-any-None,pyhd8ed1ab_0,2022-03-20 20:44:07.565000+00:00,53dbc3c1f5696df34103119354c8bc5f,None,11888.0,conda-forge/napari-cupy-image-processing/0.2.1/noarch/napari-cupy-image-processing-0.2.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-cupy-image-processing/0.2.1/noarch/napari-cupy-image-processing-0.2.1-pyhd8ed1ab_0.tar.bz2,conda,0.2.1,conda-forge,['main'],conda,noarch/napari-cupy-image-processing-0.2.2-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['cupy', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'scikit-image', 'toolz']",MIT,python,1647817663013.0,2022-03-20 23:12:09.749000+00:00,e28b6542be8ca3d0f2eb165d327baa60,None,11884.0,conda-forge/napari-cupy-image-processing/0.2.2/noarch/napari-cupy-image-processing-0.2.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-cupy-image-processing/0.2.2/noarch/napari-cupy-image-processing-0.2.2-pyhd8ed1ab_0.tar.bz2,conda,0.2.2,conda-forge,['main'],,napari-cupy-image-processing.napari_experimental_provide_function,gaussian_laplace,napari_cupy_image_processing._cupy_image_processing:gaussian_laplace,napari-cupy-image-processing.napari_experimental_provide_function,median_filter,napari_cupy_image_processing._cupy_image_processing:median_filter,napari-cupy-image-processing.napari_experimental_provide_function,percentile_filter,napari_cupy_image_processing._cupy_image_processing:percentile_filter,napari-cupy-image-processing.napari_experimental_provide_function,gaussian_filter,True,napari-cupy-image-processing.napari_experimental_provide_function,gaussian_laplace,True,napari-cupy-image-processing.napari_experimental_provide_function,median_filter,True,napari-cupy-image-processing.napari_experimental_provide_function,percentile_filter,True,napari-cupy-image-processing.napari_experimental_provide_function,white_tophat,napari_cupy_image_processing._cupy_image_processing:white_tophat,,,,,,,,,,,0.2.3,conda-forge/napari-cupy-image-processing/0.2.3,0.3.0,conda-forge/napari-cupy-image-processing/0.3.0,0.3.1,conda-forge/napari-cupy-image-processing/0.3.1,conda,noarch/napari-cupy-image-processing-0.2.3-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['cupy', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'scikit-image', 'toolz']",noarch,1652030276481.0,None-any-None,pyhd8ed1ab_0,2022-05-08 17:22:05.356000+00:00,ad6ac859539d4301f36400955ab348f1,None,12011.0,conda-forge/napari-cupy-image-processing/0.2.3/noarch/napari-cupy-image-processing-0.2.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-cupy-image-processing/0.2.3/noarch/napari-cupy-image-processing-0.2.3-pyhd8ed1ab_0.tar.bz2,conda,0.2.3,conda-forge,['main'],conda,noarch/napari-cupy-image-processing-0.3.0-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['cupy', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'scikit-image', 'toolz']",noarch,1657459562101.0,None-any-None,pyhd8ed1ab_0,2022-07-10 13:30:35.139000+00:00,38dd732c1f4918d7c07bce87f10d51b7,None,13634.0,conda-forge/napari-cupy-image-processing/0.3.0/noarch/napari-cupy-image-processing-0.3.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-cupy-image-processing/0.3.0/noarch/napari-cupy-image-processing-0.3.0-pyhd8ed1ab_0.tar.bz2,conda,0.3.0,conda-forge,['main'],conda,noarch/napari-cupy-image-processing-0.3.1-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['cupy', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops', 'napari-time-slicer', 'napari-tools-menu >=0.1.17', 'numpy', 'python >=3.7', 'scikit-image', 'stackview >=0.3.2', 'toolz']",MIT,python,1661704404464.0,2022-08-28 16:37:33.472000+00:00,213e54ba8bf54b9ebdf6975c8fc348da,None,13705.0,conda-forge/napari-cupy-image-processing/0.3.1/noarch/napari-cupy-image-processing-0.3.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-cupy-image-processing/0.3.1/noarch/napari-cupy-image-processing-0.3.1-pyhd8ed1ab_0.tar.bz2,conda,0.3.1,conda-forge,['main'],,,,napari-cupy-image-processing.napari_experimental_provide_function,morphological_gradient,napari_cupy_image_processing._cupy_image_processing:morphological_gradient,0.4.1,conda-forge/napari-cupy-image-processing/0.4.1,,,conda,noarch/napari-cupy-image-processing-0.4.1-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['cupy', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops', 'napari-time-slicer', 'napari-tools-menu >=0.1.17', 'numpy', 'python >=3.7', 'scikit-image', 'stackview >=0.3.2', 'toolz']",noarch,1692280281771.0,None-any-None,pyhd8ed1ab_0,2023-08-17 13:53:28.567000+00:00,dba5f49a0f0dbc2b48392cbb01726067,e4de6a5527dfee4f30b7551727469f7a1775381a3701c03ff4873aa4689a5bdc,15113.0,conda-forge/napari-cupy-image-processing/0.4.1/noarch/napari-cupy-image-processing-0.4.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-cupy-image-processing/0.4.1/noarch/napari-cupy-image-processing-0.4.1-pyhd8ed1ab_0.conda,conda,0.4.1,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,napari-cupy-image-processing.napari_experimental_provide_function,morphological_laplace,napari_cupy_image_processing._cupy_image_processing:morphological_laplace,napari-cupy-image-processing.napari_experimental_provide_function,wiener,napari_cupy_image_processing._cupy_image_processing:wiener,napari-cupy-image-processing.napari_experimental_provide_function,threshold_otsu,napari_cupy_image_processing._cupy_image_processing:threshold_otsu,napari-cupy-image-processing.napari_experimental_provide_function,binary_fill_holes,napari_cupy_image_processing._cupy_image_processing:binary_fill_holes,napari-cupy-image-processing.napari_experimental_provide_function,label,napari_cupy_image_processing._cupy_image_processing:label,,napari-cupy-image-processing.napari_experimental_provide_function,white_tophat,True,napari-cupy-image-processing.napari_experimental_provide_function,morphological_gradient,True,napari-cupy-image-processing.napari_experimental_provide_function,morphological_laplace,True,napari-cupy-image-processing.napari_experimental_provide_function,wiener,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +149,napari-cursor-tracker,0.1.3,Cursor tracker,Plugin for easy manual annotation/tracking of 3D or 2D + t dataset by following the cursor.,Florian Aymanns,BSD-3-Clause,https://github.com/faymanns/napari-cursor-tracker,653e741d29d410386f8de676,['conda'],,https://pypi.org/project/napari-cursor-tracker,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-cursor-tracker,http://api.anaconda.org/packages/conda-forge/napari-cursor-tracker,http://anaconda.org/conda-forge/napari-cursor-tracker,['0.1.3'],0.1.3,0.1.3,['noarch'],3.0,https://github.com/faymanns/napari-cursor-tracker,['pyh9208f05_0'],0.1.3,conda-forge/napari-cursor-tracker/0.1.3,1.0,0.0,2023-10-29 15:02:50.357000+00:00,2023-10-29 15:02:53.300000+00:00,conda,noarch/napari-cursor-tracker-0.1.3-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy']",noarch,1698591641598.0,None-any-None,pyh9208f05_0,2023-10-29 15:02:50.784000+00:00,a026402bea7d95e33a58bf5c44aaa010,945917d55161abe8fc07decb8d81ff207bc0ff66158cbfc660e9a25a127bc798,15399.0,conda-forge/napari-cursor-tracker/0.1.3/noarch/napari-cursor-tracker-0.1.3-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-cursor-tracker/0.1.3/noarch/napari-cursor-tracker-0.1.3-pyh9208f05_0.conda,conda,0.1.3,conda-forge,['main'],public,,0.2.1,napari-cursor-tracker.make_sample_data,Load sample data from Cursor tracker,napari_cursor_tracker._sample_data:make_sample_data,,,,2.1,napari-cursor-tracker,0.1.3,,Plugin for easy manual annotation/tracking of 3D or 2D + t dataset by following the cursor.,"# napari-cursor-tracker [![License BSD-3](https://img.shields.io/pypi/l/napari-cursor-tracker.svg?color=green)](https://github.com/faymanns/napari-cursor-tracker/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-cursor-tracker.svg?color=green)](https://pypi.org/project/napari-cursor-tracker) @@ -15584,8 +16354,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/faymanns/napari-cursor-tracker,Florian Aymanns,florian.aymanns@epfl.ch,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-cursor-tracker.make_qwidget,CursorTracker,napari_cursor_tracker._widget:CursorTracker,,,,,,,napari-cursor-tracker.make_qwidget,Cursor tracker,False,,,,,,,,,,,,,,,,,,,,napari-cursor-tracker.make_sample_data,unique_id.1,Cursor tracker,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -142,napari-curtain,0.1.1,napari-curtain,View one image over another as curtain,Robert Haase,BSD-3-Clause,https://github.com/haesleinhuepf/napari-curtain,61fd238613ef1fb79ebf9f8b,['conda'],,https://github.com/haesleinhuepf/napari-curtain,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-curtain,http://api.anaconda.org/packages/conda-forge/napari-curtain,http://anaconda.org/conda-forge/napari-curtain,['0.1.1'],0.1.1,0.1.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.1,conda-forge/napari-curtain/0.1.1,1.0,0.0,2022-02-04 13:00:52.049000+00:00,2023-06-18 08:40:46.728000+00:00,conda,noarch/napari-curtain-0.1.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'python >=3.7']",noarch,1643979488557.0,None-any-None,pyhd8ed1ab_0,2022-02-04 13:00:52.680000+00:00,f612170b66b505d11e41a810f338dc11,None,8860.0,conda-forge/napari-curtain/0.1.1/noarch/napari-curtain-0.1.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-curtain/0.1.1/noarch/napari-curtain-0.1.1-pyhd8ed1ab_0.tar.bz2,conda,0.1.1,conda-forge,['main'],public,,0.2.1,napari-curtain.curtain,curtain,napari_curtain._function:curtain,,,,2.1,napari-curtain,0.1.1,['UNKNOWN'],View one image over another as curtain,"# napari-curtain +",text/markdown,https://github.com/faymanns/napari-cursor-tracker,Florian Aymanns,florian.aymanns@epfl.ch,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-cursor-tracker.make_qwidget,CursorTracker,napari_cursor_tracker._widget:CursorTracker,,,,,,,napari-cursor-tracker.make_qwidget,Cursor tracker,False,,,,,,,,,,,,,,,,,,,,napari-cursor-tracker.make_sample_data,unique_id.1,Cursor tracker,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +150,napari-curtain,0.1.1,napari-curtain,View one image over another as curtain,Robert Haase,BSD-3-Clause,https://github.com/haesleinhuepf/napari-curtain,61fd238613ef1fb79ebf9f8b,['conda'],,https://github.com/haesleinhuepf/napari-curtain,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-curtain,http://api.anaconda.org/packages/conda-forge/napari-curtain,http://anaconda.org/conda-forge/napari-curtain,['0.1.1'],0.1.1,0.1.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.1,conda-forge/napari-curtain/0.1.1,1.0,0.0,2022-02-04 13:00:52.049000+00:00,2023-06-18 08:40:46.728000+00:00,conda,noarch/napari-curtain-0.1.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'python >=3.7']",noarch,1643979488557.0,None-any-None,pyhd8ed1ab_0,2022-02-04 13:00:52.680000+00:00,f612170b66b505d11e41a810f338dc11,None,8860.0,conda-forge/napari-curtain/0.1.1/noarch/napari-curtain-0.1.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-curtain/0.1.1/noarch/napari-curtain-0.1.1-pyhd8ed1ab_0.tar.bz2,conda,0.1.1,conda-forge,['main'],public,,0.2.1,napari-curtain.curtain,curtain,napari_curtain._function:curtain,,,,2.1,napari-curtain,0.1.1,['UNKNOWN'],View one image over another as curtain,"# napari-curtain [![License](https://img.shields.io/pypi/l/napari-curtain.svg?color=green)](https://github.com/haesleinhuepf/napari-curtain/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-curtain.svg?color=green)](https://pypi.org/project/napari-curtain) @@ -15646,8 +16416,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/haesleinhuepf/napari-curtain,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari-tools-menu']",>=3.7,"['Bug Tracker, https://github.com/haesleinhuepf/napari-curtain/issues', 'Documentation, https://github.com/haesleinhuepf/napari-curtain#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-curtain', 'User Support, https://github.com/haesleinhuepf/napari-curtain/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-curtain.curtain,curtain,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -143,napari-curviewer,0.1.0,Curviewer,A plugin to unroll organs along their curved central line,Romain Fernandez,LGPL-3.0-only,https://github.com/Rocsg/napari-curviewer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-curviewer.get_reader,Open data with Curviewer,napari_curviewer._reader:napari_get_reader,napari-curviewer.get_reader,['*.npy'],False,2.1,napari-curviewer,0.1.0,,A plugin to unroll organs along their curved central line,"# napari-curviewer +",text/markdown,https://github.com/haesleinhuepf/napari-curtain,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari-tools-menu']",>=3.7,"['Bug Tracker, https://github.com/haesleinhuepf/napari-curtain/issues', 'Documentation, https://github.com/haesleinhuepf/napari-curtain#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-curtain', 'User Support, https://github.com/haesleinhuepf/napari-curtain/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-curtain.curtain,curtain,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +151,napari-curviewer,0.1.0,Curviewer,A plugin to unroll organs along their curved central line,Romain Fernandez,LGPL-3.0-only,https://github.com/Rocsg/napari-curviewer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-curviewer.get_reader,Open data with Curviewer,napari_curviewer._reader:napari_get_reader,napari-curviewer.get_reader,['*.npy'],False,2.1,napari-curviewer,0.1.0,,A plugin to unroll organs along their curved central line,"# napari-curviewer [![License GNU LGPL v3.0](https://img.shields.io/pypi/l/napari-curviewer.svg?color=green)](https://github.com/Rocsg/napari-curviewer/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-curviewer.svg?color=green)](https://pypi.org/project/napari-curviewer) @@ -15714,8 +16484,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/Rocsg/napari-curviewer,Romain Fernandez,romain.fernandez@cirad.fr,LGPL-3.0-only,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU Lesser General Public License v3 (LGPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', 'vedo', 'vtk', 'scipy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/Rocsg/napari-curviewer/issues', 'Documentation, https://github.com/Rocsg/napari-curviewer#README.md', 'Source Code, https://github.com/Rocsg/napari-curviewer', 'User Support, https://github.com/Rocsg/napari-curviewer/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",napari-curviewer.write_multiple,Save multi-layer data with Curviewer,napari_curviewer._writer:write_multiple,napari-curviewer.write_single_image,Save image data with Curviewer,napari_curviewer._writer:write_single_image,napari-curviewer.make_sample_data,Load sample data from Curviewer,napari_curviewer._sample_data:make_sample_data,napari-curviewer.make_container_widget,Container Threshold,False,napari-curviewer.make_magic_widget,Magic Threshold,False,napari-curviewer.make_function_widget,Autogenerate Threshold,True,napari-curviewer.make_qwidget,Example QWidget,False,napari-curviewer.make_container_widget,Make threshold Container widget,napari_curviewer:ImageThreshold,napari-curviewer.write_multiple,"['image*', 'labels*']",,napari-curviewer.write_single_image,['image'],['.npy'],,napari-curviewer.make_sample_data,unique_id.1,Curviewer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-curviewer.make_magic_widget,Make threshold magic widget,napari_curviewer:threshold_magic_widget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-curviewer.make_function_widget,Make threshold function widget,napari_curviewer:threshold_autogenerate_widget,napari-curviewer.make_qwidget,Make example QWidget,napari_curviewer:ExampleQWidget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -144,napari-czann-segment,0.0.18,CZANN Segmentation,Semantic Segmentation using Deep Learning ONNX models packaged as *.czann files,Sebastian Rhode,BSD-3-Clause,https://github.com/sebi06/napari-czann-segment,62fe08cb0ec81727876850a6,['conda'],,https://github.com/sebi06/napari-czann-segment,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-czann-segment,http://api.anaconda.org/packages/conda-forge/napari-czann-segment,http://anaconda.org/conda-forge/napari-czann-segment,"['0.0.12', '0.0.15', '0.0.16', '0.0.17']",0.0.16,0.0.17,['noarch'],6.0,https://github.com/sebi06/napari-czann-segment,['pyhd8ed1ab_0'],0.0.12,conda-forge/napari-czann-segment/0.0.12,1.0,0.0,2022-08-18 09:39:21.190000+00:00,2023-07-28 18:46:02.509000+00:00,conda,noarch/napari-czann-segment-0.0.12-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['aicsimageio', 'czmodel', 'cztile', 'magicgui', 'napari', 'numpy', 'onnxruntime', 'python >=3.8', 'qtpy']",noarch,1660814529971.0,None-any-None,pyhd8ed1ab_0,2022-08-18 09:39:21.752000+00:00,5fce67fb140b2a6108ecc4d700b34895,9eb2e2e90623f2fce44fc0237a7dc09a5d7ff0b546da30a26116472cd151c80e,24093.0,conda-forge/napari-czann-segment/0.0.12/noarch/napari-czann-segment-0.0.12-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-czann-segment/0.0.12/noarch/napari-czann-segment-0.0.12-pyhd8ed1ab_0.tar.bz2,conda,0.0.12,conda-forge,['main'],public,,0.2.1,napari-czann-segment.get_czann_widget,CZANN segmentation Adv,napari_czann_segment.dock_widget:segment_with_czann,,,,2.1,napari-czann-segment,0.0.18,,Semantic Segmentation using Deep Learning ONNX models packaged as *.czann files,"# napari-czann-segment +",text/markdown,https://github.com/Rocsg/napari-curviewer,Romain Fernandez,romain.fernandez@cirad.fr,LGPL-3.0-only,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU Lesser General Public License v3 (LGPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', 'vedo', 'vtk', 'scipy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/Rocsg/napari-curviewer/issues', 'Documentation, https://github.com/Rocsg/napari-curviewer#README.md', 'Source Code, https://github.com/Rocsg/napari-curviewer', 'User Support, https://github.com/Rocsg/napari-curviewer/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",napari-curviewer.write_multiple,Save multi-layer data with Curviewer,napari_curviewer._writer:write_multiple,napari-curviewer.write_single_image,Save image data with Curviewer,napari_curviewer._writer:write_single_image,napari-curviewer.make_sample_data,Load sample data from Curviewer,napari_curviewer._sample_data:make_sample_data,napari-curviewer.make_container_widget,Container Threshold,False,napari-curviewer.make_magic_widget,Magic Threshold,False,napari-curviewer.make_function_widget,Autogenerate Threshold,True,napari-curviewer.make_qwidget,Example QWidget,False,napari-curviewer.make_container_widget,Make threshold Container widget,napari_curviewer:ImageThreshold,napari-curviewer.write_multiple,"['image*', 'labels*']",,napari-curviewer.write_single_image,['image'],['.npy'],,napari-curviewer.make_sample_data,unique_id.1,Curviewer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-curviewer.make_magic_widget,Make threshold magic widget,napari_curviewer:threshold_magic_widget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-curviewer.make_function_widget,Make threshold function widget,napari_curviewer:threshold_autogenerate_widget,napari-curviewer.make_qwidget,Make example QWidget,napari_curviewer:ExampleQWidget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +152,napari-czann-segment,0.0.18,CZANN Segmentation,Semantic Segmentation using Deep Learning ONNX models packaged as *.czann files,Sebastian Rhode,BSD-3-Clause,https://github.com/sebi06/napari-czann-segment,62fe08cb0ec81727876850a6,['conda'],,https://github.com/sebi06/napari-czann-segment,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-czann-segment,http://api.anaconda.org/packages/conda-forge/napari-czann-segment,http://anaconda.org/conda-forge/napari-czann-segment,"['0.0.12', '0.0.15', '0.0.16', '0.0.17']",0.0.16,0.0.17,['noarch'],6.0,https://github.com/sebi06/napari-czann-segment,['pyhd8ed1ab_0'],0.0.12,conda-forge/napari-czann-segment/0.0.12,1.0,0.0,2022-08-18 09:39:21.190000+00:00,2023-07-28 18:46:02.509000+00:00,conda,noarch/napari-czann-segment-0.0.12-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['aicsimageio', 'czmodel', 'cztile', 'magicgui', 'napari', 'numpy', 'onnxruntime', 'python >=3.8', 'qtpy']",noarch,1660814529971.0,None-any-None,pyhd8ed1ab_0,2022-08-18 09:39:21.752000+00:00,5fce67fb140b2a6108ecc4d700b34895,9eb2e2e90623f2fce44fc0237a7dc09a5d7ff0b546da30a26116472cd151c80e,24093.0,conda-forge/napari-czann-segment/0.0.12/noarch/napari-czann-segment-0.0.12-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-czann-segment/0.0.12/noarch/napari-czann-segment-0.0.12-pyhd8ed1ab_0.tar.bz2,conda,0.0.12,conda-forge,['main'],public,,0.2.1,napari-czann-segment.get_czann_widget,CZANN segmentation Adv,napari_czann_segment.dock_widget:segment_with_czann,,,,2.1,napari-czann-segment,0.0.18,,Semantic Segmentation using Deep Learning ONNX models packaged as *.czann files,"# napari-czann-segment [![License](https://img.shields.io/pypi/l/napari-czann-segment.svg?color=green)](https://github.com/sebi06/napari-czann-segment/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-czann-segment.svg?color=green)](https://pypi.org/project/napari-czann-segment) @@ -15862,8 +16632,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [ONNX-CPU]: https://pypi.org/project/onnxruntime/ [conda]: https://docs.conda.io/projects/conda/en/latest/user-guide/getting-started.html [pytorch]: https://pytorch.org/get-started/locally -",text/markdown,https://github.com/sebi06/napari-czann-segment,Sebastian Rhode,sebrhode@gmail.com,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: BSD License', 'Operating System :: Unix', 'Operating System :: Microsoft :: Windows', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'napari', 'cztile', 'czmodel[pytorch] >=5', 'onnxruntime-gpu', 'aicsimageio', 'pytest', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.9,"['Bug Tracker, https://github.com/sebi06/napari-czann-segment/issues', 'Documentation, https://github.com/sebi06/napari-czann-segment#README.md', 'Source Code, https://github.com/sebi06/napari-czann-segment', 'User Support, https://github.com/sebi06/napari-czann-segment/issues']",['testing'],False,0.0.15,conda-forge/napari-czann-segment/0.0.15,0.0.16,conda-forge/napari-czann-segment/0.0.16,0.0.17,conda-forge/napari-czann-segment/0.0.17,conda,noarch/napari-czann-segment-0.0.15-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['aicsimageio', 'czmodel', 'cztile', 'dask-core', 'magicgui', 'napari', 'numpy', 'onnxruntime', 'python >=3.8', 'qtpy', 'scikit-image', 'tqdm']",pyhd8ed1ab_0,1661418871912.0,None-any-None,noarch,2022-08-25 09:17:23.140000+00:00,9452ba09d40801406c577aafb09b972e,None,23716.0,conda-forge/napari-czann-segment/0.0.15/noarch/napari-czann-segment-0.0.15-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-czann-segment/0.0.15/noarch/napari-czann-segment-0.0.15-pyhd8ed1ab_0.tar.bz2,conda,0.0.15,conda-forge,['main'],conda,noarch/napari-czann-segment-0.0.16-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['aicsimageio', 'czmodel', 'cztile', 'dask-core', 'magicgui', 'napari', 'numpy', 'onnxruntime', 'python >=3.8', 'qtpy', 'scikit-image', 'tqdm']",noarch,1666567308538.0,None-any-None,pyhd8ed1ab_0,2022-10-23 23:24:59.149000+00:00,3e13b4ba1de7e5aa55880a9fe7ea29e8,None,23831.0,conda-forge/napari-czann-segment/0.0.16/noarch/napari-czann-segment-0.0.16-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-czann-segment/0.0.16/noarch/napari-czann-segment-0.0.16-pyhd8ed1ab_0.tar.bz2,conda,0.0.16,conda-forge,['main'],conda,noarch/napari-czann-segment-0.0.17-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['aicsimageio', 'czmodel >=5', 'cztile', 'dask-core', 'magicgui', 'napari', 'numpy', 'onnxruntime', 'python >=3.8', 'pytorch', 'qtpy', 'scikit-image', 'tifffile >=2023.4.12', 'tqdm']",BSD-3-Clause,python,1690569731386.0,2023-07-28 18:46:00.948000+00:00,7bbbced5954418b59aed5733cc0b8b19,511e966a0bbf8e853cb0e763527796801c530b23abb6bdb577ae4fca0c52752d,25658.0,conda-forge/napari-czann-segment/0.0.17/noarch/napari-czann-segment-0.0.17-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-czann-segment/0.0.17/noarch/napari-czann-segment-0.0.17-pyhd8ed1ab_0.conda,conda,0.0.17,conda-forge,['main'],,,,,,,,,,,napari-czann-segment.get_czann_widget,Segment with CZANN Model,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -145,napari-czifile2,0.2.7,napari-czifile2,Carl Zeiss Image (.czi) file support for napari,Jonas Windhager,MIT,https://github.com/BodenmillerGroup/napari-czifile2,61f856f639552dcb59984301,['conda'],,https://github.com/BodenmillerGroup/napari-czifile2,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-czifile2,http://api.anaconda.org/packages/conda-forge/napari-czifile2,http://anaconda.org/conda-forge/napari-czifile2,"['0.2.5', '0.2.6', '0.2.7']",0.2.7,0.2.7,['noarch'],5.0,,['pyhd8ed1ab_0'],0.2.5,conda-forge/napari-czifile2/0.2.5,1.0,0.0,2022-01-31 21:39:00.861000+00:00,2023-06-18 08:40:40.535000+00:00,conda,noarch/napari-czifile2-0.2.5-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['czifile', 'imagecodecs', 'napari >=0.4.11', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'tifffile']",noarch,1643664988456.0,None-any-None,pyhd8ed1ab_0,2022-01-31 21:39:01.183000+00:00,92a2cb5c9bc7976c20b3a0742cdd5d95,None,9445.0,conda-forge/napari-czifile2/0.2.5/noarch/napari-czifile2-0.2.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-czifile2/0.2.5/noarch/napari-czifile2-0.2.5-pyhd8ed1ab_0.tar.bz2,conda,0.2.5,conda-forge,['main'],public,,0.1.0,napari-czifile2.get_reader,Read Carl Zeiss Image (CZI) image files using czifile,napari_czifile2._reader:napari_get_reader,napari-czifile2.get_reader,['*.czi'],False,2.1,napari-czifile2,0.2.7,,Carl Zeiss Image (.czi) file support for napari,"# napari-czifile2 +",text/markdown,https://github.com/sebi06/napari-czann-segment,Sebastian Rhode,sebrhode@gmail.com,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: BSD License', 'Operating System :: Unix', 'Operating System :: Microsoft :: Windows', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'napari', 'cztile', 'czmodel[pytorch] >=5', 'onnxruntime-gpu', 'aicsimageio', 'pytest', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.9,"['Bug Tracker, https://github.com/sebi06/napari-czann-segment/issues', 'Documentation, https://github.com/sebi06/napari-czann-segment#README.md', 'Source Code, https://github.com/sebi06/napari-czann-segment', 'User Support, https://github.com/sebi06/napari-czann-segment/issues']",['testing'],False,0.0.15,conda-forge/napari-czann-segment/0.0.15,0.0.16,conda-forge/napari-czann-segment/0.0.16,0.0.17,conda-forge/napari-czann-segment/0.0.17,conda,noarch/napari-czann-segment-0.0.15-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['aicsimageio', 'czmodel', 'cztile', 'dask-core', 'magicgui', 'napari', 'numpy', 'onnxruntime', 'python >=3.8', 'qtpy', 'scikit-image', 'tqdm']",pyhd8ed1ab_0,1661418871912.0,None-any-None,noarch,2022-08-25 09:17:23.140000+00:00,9452ba09d40801406c577aafb09b972e,None,23716.0,conda-forge/napari-czann-segment/0.0.15/noarch/napari-czann-segment-0.0.15-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-czann-segment/0.0.15/noarch/napari-czann-segment-0.0.15-pyhd8ed1ab_0.tar.bz2,conda,0.0.15,conda-forge,['main'],conda,noarch/napari-czann-segment-0.0.16-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['aicsimageio', 'czmodel', 'cztile', 'dask-core', 'magicgui', 'napari', 'numpy', 'onnxruntime', 'python >=3.8', 'qtpy', 'scikit-image', 'tqdm']",noarch,1666567308538.0,None-any-None,pyhd8ed1ab_0,2022-10-23 23:24:59.149000+00:00,3e13b4ba1de7e5aa55880a9fe7ea29e8,None,23831.0,conda-forge/napari-czann-segment/0.0.16/noarch/napari-czann-segment-0.0.16-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-czann-segment/0.0.16/noarch/napari-czann-segment-0.0.16-pyhd8ed1ab_0.tar.bz2,conda,0.0.16,conda-forge,['main'],conda,noarch/napari-czann-segment-0.0.17-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['aicsimageio', 'czmodel >=5', 'cztile', 'dask-core', 'magicgui', 'napari', 'numpy', 'onnxruntime', 'python >=3.8', 'pytorch', 'qtpy', 'scikit-image', 'tifffile >=2023.4.12', 'tqdm']",BSD-3-Clause,python,1690569731386.0,2023-07-28 18:46:00.948000+00:00,7bbbced5954418b59aed5733cc0b8b19,511e966a0bbf8e853cb0e763527796801c530b23abb6bdb577ae4fca0c52752d,25658.0,conda-forge/napari-czann-segment/0.0.17/noarch/napari-czann-segment-0.0.17-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-czann-segment/0.0.17/noarch/napari-czann-segment-0.0.17-pyhd8ed1ab_0.conda,conda,0.0.17,conda-forge,['main'],,,,,,,,,,,napari-czann-segment.get_czann_widget,Segment with CZANN Model,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +153,napari-czifile2,0.2.7,napari-czifile2,Carl Zeiss Image (.czi) file support for napari,Jonas Windhager,MIT,https://github.com/BodenmillerGroup/napari-czifile2,61f856f639552dcb59984301,['conda'],,https://github.com/BodenmillerGroup/napari-czifile2,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-czifile2,http://api.anaconda.org/packages/conda-forge/napari-czifile2,http://anaconda.org/conda-forge/napari-czifile2,"['0.2.5', '0.2.6', '0.2.7']",0.2.7,0.2.7,['noarch'],5.0,,['pyhd8ed1ab_0'],0.2.5,conda-forge/napari-czifile2/0.2.5,1.0,0.0,2022-01-31 21:39:00.861000+00:00,2023-06-18 08:40:40.535000+00:00,conda,noarch/napari-czifile2-0.2.5-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['czifile', 'imagecodecs', 'napari >=0.4.11', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'tifffile']",noarch,1643664988456.0,None-any-None,pyhd8ed1ab_0,2022-01-31 21:39:01.183000+00:00,92a2cb5c9bc7976c20b3a0742cdd5d95,None,9445.0,conda-forge/napari-czifile2/0.2.5/noarch/napari-czifile2-0.2.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-czifile2/0.2.5/noarch/napari-czifile2-0.2.5-pyhd8ed1ab_0.tar.bz2,conda,0.2.5,conda-forge,['main'],public,,0.1.0,napari-czifile2.get_reader,Read Carl Zeiss Image (CZI) image files using czifile,napari_czifile2._reader:napari_get_reader,napari-czifile2.get_reader,['*.czi'],False,2.1,napari-czifile2,0.2.7,,Carl Zeiss Image (.czi) file support for napari,"# napari-czifile2 @@ -15910,8 +16680,8 @@ Created and maintained by Jonas Windhager [jonas.windhager@uzh.ch](mailto:jonas. ## License [MIT](https://github.com/BodenmillerGroup/napari-czifile2/blob/main/LICENSE.md) -",text/markdown,https://github.com/BodenmillerGroup/napari-czifile2,Jonas Windhager,jonas.windhager@uzh.ch,MIT,"['Development Status :: 4 - Beta', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['czifile', 'imagecodecs', 'numpy', 'tifffile']",>=3.8,"['Bug Tracker, https://github.com/BodenmillerGroup/napari-czifile2/issues', 'Documentation, https://github.com/BodenmillerGroup/napari-czifile2#README.md', 'Source Code, https://github.com/BodenmillerGroup/napari-czifile2', 'User Support, https://github.com/BodenmillerGroup/napari-czifile2/issues']",,False,0.2.6,conda-forge/napari-czifile2/0.2.6,0.2.7,conda-forge/napari-czifile2/0.2.7,,,conda,noarch/napari-czifile2-0.2.6-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['czifile', 'imagecodecs', 'napari >=0.4.11', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'tifffile']",pyhd8ed1ab_0,1643978610704.0,None-any-None,noarch,2022-02-04 12:46:21.775000+00:00,3d1f0eb5acf11bf336e6a62b3798960f,None,9529.0,conda-forge/napari-czifile2/0.2.6/noarch/napari-czifile2-0.2.6-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-czifile2/0.2.6/noarch/napari-czifile2-0.2.6-pyhd8ed1ab_0.tar.bz2,conda,0.2.6,conda-forge,['main'],conda,noarch/napari-czifile2-0.2.7-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['czifile', 'imagecodecs', 'napari >=0.4.11', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'tifffile']",noarch,1654160218210.0,None-any-None,pyhd8ed1ab_0,2022-06-02 08:59:38.969000+00:00,21365e0a38d4c1939a4ed25164fbcc01,None,9807.0,conda-forge/napari-czifile2/0.2.7/noarch/napari-czifile2-0.2.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-czifile2/0.2.7/noarch/napari-czifile2-0.2.7-pyhd8ed1ab_0.tar.bz2,conda,0.2.7,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -146,napari-data-preview,0.0.3a0,napari-data-preview,"Preview lightsheet microscopes acquisition, and allow the creation of an XML for importing the data into TeraStitcher.","Vivien Gaillet, Jules Scholler",MPL-2.0,https://github.com/WyssCenter/napari-data-preview,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.0.3-alpha,napari-data-preview.DataPreview,Open my widget,napari_data_preview:DataPreview,napari-data-preview.napari_get_reader,['*'],True,2.1,napari-data-preview,0.0.3a0,,"Preview lightsheet microscopes acquisition, and allow the creation of an XML for importing the data into TeraStitcher.","# napari-data-preview +",text/markdown,https://github.com/BodenmillerGroup/napari-czifile2,Jonas Windhager,jonas.windhager@uzh.ch,MIT,"['Development Status :: 4 - Beta', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['czifile', 'imagecodecs', 'numpy', 'tifffile']",>=3.8,"['Bug Tracker, https://github.com/BodenmillerGroup/napari-czifile2/issues', 'Documentation, https://github.com/BodenmillerGroup/napari-czifile2#README.md', 'Source Code, https://github.com/BodenmillerGroup/napari-czifile2', 'User Support, https://github.com/BodenmillerGroup/napari-czifile2/issues']",,False,0.2.6,conda-forge/napari-czifile2/0.2.6,0.2.7,conda-forge/napari-czifile2/0.2.7,,,conda,noarch/napari-czifile2-0.2.6-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['czifile', 'imagecodecs', 'napari >=0.4.11', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'tifffile']",pyhd8ed1ab_0,1643978610704.0,None-any-None,noarch,2022-02-04 12:46:21.775000+00:00,3d1f0eb5acf11bf336e6a62b3798960f,None,9529.0,conda-forge/napari-czifile2/0.2.6/noarch/napari-czifile2-0.2.6-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-czifile2/0.2.6/noarch/napari-czifile2-0.2.6-pyhd8ed1ab_0.tar.bz2,conda,0.2.6,conda-forge,['main'],conda,noarch/napari-czifile2-0.2.7-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['czifile', 'imagecodecs', 'napari >=0.4.11', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'tifffile']",noarch,1654160218210.0,None-any-None,pyhd8ed1ab_0,2022-06-02 08:59:38.969000+00:00,21365e0a38d4c1939a4ed25164fbcc01,None,9807.0,conda-forge/napari-czifile2/0.2.7/noarch/napari-czifile2-0.2.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-czifile2/0.2.7/noarch/napari-czifile2-0.2.7-pyhd8ed1ab_0.tar.bz2,conda,0.2.7,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +154,napari-data-preview,0.0.3a0,napari-data-preview,"Preview lightsheet microscopes acquisition, and allow the creation of an XML for importing the data into TeraStitcher.","Vivien Gaillet, Jules Scholler",MPL-2.0,https://github.com/WyssCenter/napari-data-preview,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.0.3-alpha,napari-data-preview.DataPreview,Open my widget,napari_data_preview:DataPreview,napari-data-preview.napari_get_reader,['*'],True,2.1,napari-data-preview,0.0.3a0,,"Preview lightsheet microscopes acquisition, and allow the creation of an XML for importing the data into TeraStitcher.","# napari-data-preview Preview lightsheet microscopes acquisition, and allow the creation of an XML for importing the data into TeraStitcher. @@ -15926,8 +16696,8 @@ You can install `napari-data-preview` via [pip]: To install latest development version : pip install git+https://github.com/WyssCenter/napari-data-preview.git -",text/markdown,https://github.com/WyssCenter/napari-data-preview,"Vivien Gaillet, Jules Scholler",jules.scholler@wysscenter.ch,MPL-2.0,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: Mozilla Public License 2.0 (MPL 2.0)']","['numpy', 'napari[all]', 'lxml', 'napari-tools-menu', 'magic-class', 'napari-plugin-engine (>=0.1.4)', 'dask', 'tifffile', 'dask-image', 'elementpath', 'tk (>=0.1.0)', 'zarr', 'scikit-image', 'PySimpleGUI', 'pytest-shutil']",>=3.7,,,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-data-preview.napari_get_reader,Get Reader,napari_data_preview._reader:napari_get_reader,,,,,,,napari-data-preview.DataPreview,Lightsheet data preview,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -147,napari-deepfinder,0.0.1,Napari DeepFinder,"A napari plugin for the DeepFinder library which includes display, annotation, target generation, segmentation and clustering functionalities. An orthoslice view has been added for an easier visualisation and annotation process.",Constantin Aronssohn,GPL-3.0-only,https://github.com/deep-finder/napari-deepfinder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-deepfinder.get_reader,Open data with Napari DeepFinder,napari_deepfinder._reader:napari_get_reader,napari-deepfinder.get_reader,"['*.mrc', '*.map', '*.rec', '*.h5', '*.tif', '*.TIF', '*.xml', '*.ods', '*.xls', '*.xlsx']",False,2.1,napari-deepfinder,0.0.1,,"A napari plugin for the DeepFinder library which includes display, annotation, target generation, segmentation and clustering functionalities. An orthoslice view has been added for an easier visualisation and annotation process.","# napari-deepfinder +",text/markdown,https://github.com/WyssCenter/napari-data-preview,"Vivien Gaillet, Jules Scholler",jules.scholler@wysscenter.ch,MPL-2.0,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: Mozilla Public License 2.0 (MPL 2.0)']","['numpy', 'napari[all]', 'lxml', 'napari-tools-menu', 'magic-class', 'napari-plugin-engine (>=0.1.4)', 'dask', 'tifffile', 'dask-image', 'elementpath', 'tk (>=0.1.0)', 'zarr', 'scikit-image', 'PySimpleGUI', 'pytest-shutil']",>=3.7,,,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-data-preview.napari_get_reader,Get Reader,napari_data_preview._reader:napari_get_reader,,,,,,,napari-data-preview.DataPreview,Lightsheet data preview,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +155,napari-deepfinder,0.0.1,Napari DeepFinder,"A napari plugin for the DeepFinder library which includes display, annotation, target generation, segmentation and clustering functionalities. An orthoslice view has been added for an easier visualisation and annotation process.",Constantin Aronssohn,GPL-3.0-only,https://github.com/deep-finder/napari-deepfinder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-deepfinder.get_reader,Open data with Napari DeepFinder,napari_deepfinder._reader:napari_get_reader,napari-deepfinder.get_reader,"['*.mrc', '*.map', '*.rec', '*.h5', '*.tif', '*.TIF', '*.xml', '*.ods', '*.xls', '*.xlsx']",False,2.1,napari-deepfinder,0.0.1,,"A napari plugin for the DeepFinder library which includes display, annotation, target generation, segmentation and clustering functionalities. An orthoslice view has been added for an easier visualisation and annotation process.","# napari-deepfinder [![License GNU GPL v3.0](https://img.shields.io/pypi/l/napari-deepfinder.svg?color=green)](https://github.com/deep-finder/napari-deepfinder/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-deepfinder.svg?color=green)](https://pypi.org/project/napari-deepfinder) @@ -15997,8 +16767,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/deep-finder/napari-deepfinder,Constantin Aronssohn,cnstt@tutanota.com,GPL-3.0-only,"['Development Status :: 3 - Alpha', 'Intended Audience :: Education', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering', 'Topic :: Scientific/Engineering :: Visualization', 'Topic :: Scientific/Engineering :: Information Analysis', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Topic :: Scientific/Engineering :: Artificial Intelligence', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']","['em-deepfinder', 'numpy', 'magicgui', 'qtpy', 'napari', 'scikit-image', 'typing', 'pandas', 'lxml', 'pillow', 'h5py', 'mrcfile', 'scipy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/deep-finder/napari-deepfinder/issues', 'Documentation, https://deep-finder.github.io/napari-deepfinder/', 'Source Code, https://github.com/deep-finder/napari-deepfinder', 'User Support, https://github.com/deep-finder/napari-deepfinder/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-deepfinder.make_denoise_widget,Make denoise widget,napari_deepfinder._widget:denoise_widget,napari-deepfinder.make_reorder_widget,Reorder layers automatically,napari_deepfinder._widget:reorder_widget,napari-deepfinder.make_add_points_widget,Add points to layers,napari_deepfinder._widget:AddPointsWidget,napari-deepfinder.make_reorder_widget,Reorder layers automatically,False,napari-deepfinder.make_denoise_widget,Denoise tomogram,False,napari-deepfinder.make_add_points_widget,Annotation,False,napari-deepfinder.make_orthoview,Orthoslice view,False,napari-deepfinder.write_annotations,Save annotation layers (points) to xml file,napari_deepfinder._writer:write_annotations_xml,napari-deepfinder.write_annotations,['points*'],,napari-deepfinder.write_labelmap,['labels'],['.mrc'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-deepfinder.write_labelmap,Save labelmap layer (labels) to mrc file,napari_deepfinder._writer:write_labelmap,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-deepfinder.write_tomogram,Save tomogram layer (image) to mrc file,napari_deepfinder._writer:write_tomogram,napari-deepfinder.make_orthoview,Orthoslice,napari_deepfinder._orthoview_widget:Orthoslice,napari-deepfinder.make_segmentation,Segmentation,napari_deepfinder._segmentation_widget:SegmentationWidget,napari-deepfinder.make_cluster,Clustering,napari_deepfinder._cluster_widget:ClusterWidget,,,,,,,['.xml'],napari-deepfinder.make_segmentation,Segmentation,False,napari-deepfinder.make_cluster,Clustering,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -148,napari-deeplabcut,0.2.1.7,napari DeepLabCut,napari + DeepLabCut annotation tool,"Team DeepLabCut, Lead by Jessy Lauer",BSD-3-Clause,https://github.com/DeepLabCut/napari-deeplabcut,62c45dcde8e8f33544852bf8,['conda'],,https://github.com/DeepLabCut/napari-deeplabcut,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-deeplabcut,http://api.anaconda.org/packages/conda-forge/napari-deeplabcut,http://anaconda.org/conda-forge/napari-deeplabcut,"['0.0.2', '0.0.3', '0.0.4', '0.0.5', '0.0.6', '0.0.7', '0.0.9', '0.1.2', '0.2.1', '0.2.1.1', '0.2.1.2', '0.2.1.3', '0.2.1.7']",0.2.1.7,0.2.1.7,['noarch'],27.0,https://github.com/DeepLabCut/napari-deeplabcut,"['pyhd8ed1ab_0', 'pyhd8ed1ab_1']",0.0.2,conda-forge/napari-deeplabcut/0.0.2,1.0,0.0,2022-07-05 15:50:35.585000+00:00,2024-07-11 10:18:10.512000+00:00,conda,noarch/napari-deeplabcut-0.0.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-image', 'napari <0.5.0', 'numpy', 'pandas', 'pytables', 'python >=3.8', 'qtpy', 'ruamel.yaml']",noarch,1657036103409.0,None-any-None,pyhd8ed1ab_0,2022-07-05 15:50:35.911000+00:00,a0b194c309c2398ee2261c4653aa6bab,None,19947.0,conda-forge/napari-deeplabcut/0.0.2/noarch/napari-deeplabcut-0.0.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-deeplabcut/0.0.2/noarch/napari-deeplabcut-0.0.2-pyhd8ed1ab_0.tar.bz2,conda,0.0.2,conda-forge,['main'],public,,0.2.1,napari-deeplabcut.get_hdf_reader,Open data with napari DeepLabCut,napari_deeplabcut._reader:get_hdf_reader,napari-deeplabcut.get_hdf_reader,['*.h5'],False,2.1,napari-deeplabcut,0.2.1.7,,napari + DeepLabCut annotation tool,"# napari-deeplabcut: keypoint annotation for pose estimation +",text/markdown,https://github.com/deep-finder/napari-deepfinder,Constantin Aronssohn,cnstt@tutanota.com,GPL-3.0-only,"['Development Status :: 3 - Alpha', 'Intended Audience :: Education', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering', 'Topic :: Scientific/Engineering :: Visualization', 'Topic :: Scientific/Engineering :: Information Analysis', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Topic :: Scientific/Engineering :: Artificial Intelligence', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']","['em-deepfinder', 'numpy', 'magicgui', 'qtpy', 'napari', 'scikit-image', 'typing', 'pandas', 'lxml', 'pillow', 'h5py', 'mrcfile', 'scipy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/deep-finder/napari-deepfinder/issues', 'Documentation, https://deep-finder.github.io/napari-deepfinder/', 'Source Code, https://github.com/deep-finder/napari-deepfinder', 'User Support, https://github.com/deep-finder/napari-deepfinder/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-deepfinder.make_denoise_widget,Make denoise widget,napari_deepfinder._widget:denoise_widget,napari-deepfinder.make_reorder_widget,Reorder layers automatically,napari_deepfinder._widget:reorder_widget,napari-deepfinder.make_add_points_widget,Add points to layers,napari_deepfinder._widget:AddPointsWidget,napari-deepfinder.make_reorder_widget,Reorder layers automatically,False,napari-deepfinder.make_denoise_widget,Denoise tomogram,False,napari-deepfinder.make_add_points_widget,Annotation,False,napari-deepfinder.make_orthoview,Orthoslice view,False,napari-deepfinder.write_annotations,Save annotation layers (points) to xml file,napari_deepfinder._writer:write_annotations_xml,napari-deepfinder.write_annotations,['points*'],,napari-deepfinder.write_labelmap,['labels'],['.mrc'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-deepfinder.write_labelmap,Save labelmap layer (labels) to mrc file,napari_deepfinder._writer:write_labelmap,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-deepfinder.write_tomogram,Save tomogram layer (image) to mrc file,napari_deepfinder._writer:write_tomogram,napari-deepfinder.make_orthoview,Orthoslice,napari_deepfinder._orthoview_widget:Orthoslice,napari-deepfinder.make_segmentation,Segmentation,napari_deepfinder._segmentation_widget:SegmentationWidget,napari-deepfinder.make_cluster,Clustering,napari_deepfinder._cluster_widget:ClusterWidget,,,,['.xml'],napari-deepfinder.make_segmentation,Segmentation,False,napari-deepfinder.make_cluster,Clustering,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +156,napari-deeplabcut,0.2.1.7,napari DeepLabCut,napari + DeepLabCut annotation tool,"Team DeepLabCut, Lead by Jessy Lauer",BSD-3-Clause,https://github.com/DeepLabCut/napari-deeplabcut,62c45dcde8e8f33544852bf8,['conda'],,https://github.com/DeepLabCut/napari-deeplabcut,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-deeplabcut,http://api.anaconda.org/packages/conda-forge/napari-deeplabcut,http://anaconda.org/conda-forge/napari-deeplabcut,"['0.0.2', '0.0.3', '0.0.4', '0.0.5', '0.0.6', '0.0.7', '0.0.9', '0.1.2', '0.2.1', '0.2.1.1', '0.2.1.2', '0.2.1.3', '0.2.1.7']",0.2.1.7,0.2.1.7,['noarch'],27.0,https://github.com/DeepLabCut/napari-deeplabcut,"['pyhd8ed1ab_0', 'pyhd8ed1ab_1']",0.0.2,conda-forge/napari-deeplabcut/0.0.2,1.0,0.0,2022-07-05 15:50:35.585000+00:00,2024-07-11 10:18:10.512000+00:00,conda,noarch/napari-deeplabcut-0.0.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-image', 'napari <0.5.0', 'numpy', 'pandas', 'pytables', 'python >=3.8', 'qtpy', 'ruamel.yaml']",noarch,1657036103409.0,None-any-None,pyhd8ed1ab_0,2022-07-05 15:50:35.911000+00:00,a0b194c309c2398ee2261c4653aa6bab,None,19947.0,conda-forge/napari-deeplabcut/0.0.2/noarch/napari-deeplabcut-0.0.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-deeplabcut/0.0.2/noarch/napari-deeplabcut-0.0.2-pyhd8ed1ab_0.tar.bz2,conda,0.0.2,conda-forge,['main'],public,,0.2.1,napari-deeplabcut.get_hdf_reader,Open data with napari DeepLabCut,napari_deeplabcut._reader:get_hdf_reader,napari-deeplabcut.get_hdf_reader,['*.h5'],False,2.1,napari-deeplabcut,0.2.1.7,,napari + DeepLabCut annotation tool,"# napari-deeplabcut: keypoint annotation for pose estimation @@ -16223,8 +16993,8 @@ https://napari.org/plugins/stable/index.html [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/DeepLabCut/napari-deeplabcut,"Team DeepLabCut, Lead by Jessy Lauer",admin@deeplabcut.org,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Artificial Intelligence', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Visualization']","['dask-image', 'matplotlib >=3.3', 'napari ==0.4.18', 'natsort', 'numpy', 'opencv-python-headless', 'pandas', 'pyyaml', 'qtpy >=2.4', 'scikit-image', 'scipy', 'tables', ""pyside6 ==6.4.2 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]",>=3.9,"['Bug Tracker, https://github.com/DeepLabCut/napari-deeplabcut/issues', 'Documentation, https://github.com/DeepLabCut/napari-deeplabcut#README.md', 'Source Code, https://github.com/DeepLabCut/napari-deeplabcut', 'User Support, https://github.com/DeepLabCut/napari-deeplabcut/issues']",['testing'],False,0.0.3,conda-forge/napari-deeplabcut/0.0.3,0.0.4,conda-forge/napari-deeplabcut/0.0.4,0.0.5,conda-forge/napari-deeplabcut/0.0.5,conda,noarch/napari-deeplabcut-0.0.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-image', 'napari <0.5.0', 'numpy', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image']",pyhd8ed1ab_0,1657120927654.0,None-any-None,noarch,2022-07-06 15:24:13.190000+00:00,91c53d8e1ac98f709a506c197062afd0,None,20691.0,conda-forge/napari-deeplabcut/0.0.3/noarch/napari-deeplabcut-0.0.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-deeplabcut/0.0.3/noarch/napari-deeplabcut-0.0.3-pyhd8ed1ab_0.tar.bz2,conda,0.0.3,conda-forge,['main'],conda,noarch/napari-deeplabcut-0.0.3-pyhd8ed1ab_1.tar.bz2,1.0,BSD-3-Clause,False,python,"['dask-image', 'napari <0.5.0', 'numpy', 'pandas', 'pytables', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image']",noarch,1657237177249.0,None-any-None,pyhd8ed1ab_1,2022-07-07 23:42:03.754000+00:00,04edf7c83b48b4613df0b9907b37595b,None,20635.0,conda-forge/napari-deeplabcut/0.0.3/noarch/napari-deeplabcut-0.0.3-pyhd8ed1ab_1.tar.bz2,//api.anaconda.org/download/conda-forge/napari-deeplabcut/0.0.3/noarch/napari-deeplabcut-0.0.3-pyhd8ed1ab_1.tar.bz2,conda,0.0.3,conda-forge,['main'],conda,noarch/napari-deeplabcut-0.0.4-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['dask-core', 'dask-image', 'napari <0.5.0', 'numpy', 'opencv', 'pandas', 'pytables', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image']",BSD-3-Clause,python,1660338057174.0,2022-08-12 21:03:14.570000+00:00,eb0ea449795728ae3f96405e1837a8c9,None,22200.0,conda-forge/napari-deeplabcut/0.0.4/noarch/napari-deeplabcut-0.0.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-deeplabcut/0.0.4/noarch/napari-deeplabcut-0.0.4-pyhd8ed1ab_0.tar.bz2,conda,0.0.4,conda-forge,['main'],,napari-deeplabcut.get_image_reader,Open images with napari DeepLabCut,napari_deeplabcut._reader:get_image_reader,napari-deeplabcut.get_video_reader,Open videos with napari DeepLabCut,napari_deeplabcut._reader:get_video_reader,napari-deeplabcut.get_folder_parser,Open folder with napari DeepLabCut,napari_deeplabcut._reader:get_folder_parser,napari-deeplabcut.make_keypoint_controls,Keypoint controls,False,,,,,,,,,,napari-deeplabcut.get_config_reader,Open config with napari DeepLabCut,napari_deeplabcut._reader:get_config_reader,napari-deeplabcut.write_hdf,['points{1}'],,napari-deeplabcut.write_masks,['shapes{1}'],['.csv'],,,,,0.0.6,conda-forge/napari-deeplabcut/0.0.6,0.0.7,conda-forge/napari-deeplabcut/0.0.7,0.0.9,conda-forge/napari-deeplabcut/0.0.9,conda,noarch/napari-deeplabcut-0.0.5-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core', 'dask-image', 'napari <0.5.0', 'numpy', 'opencv', 'pandas', 'pytables', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image']",noarch,1661968431295.0,None-any-None,pyhd8ed1ab_0,2022-08-31 17:56:48.984000+00:00,c6706d8c1b2b13d0a8871863ee9bb6c5,None,23837.0,conda-forge/napari-deeplabcut/0.0.5/noarch/napari-deeplabcut-0.0.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-deeplabcut/0.0.5/noarch/napari-deeplabcut-0.0.5-pyhd8ed1ab_0.tar.bz2,conda,0.0.5,conda-forge,['main'],conda,noarch/napari-deeplabcut-0.0.6-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core', 'dask-image', 'napari <0.5.0', 'numpy', 'opencv', 'pandas', 'pytables', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image']",noarch,1662425389256.0,None-any-None,pyhd8ed1ab_0,2022-09-06 00:52:32.504000+00:00,b5741759306057c745e6b8d9a67c738f,None,24750.0,conda-forge/napari-deeplabcut/0.0.6/noarch/napari-deeplabcut-0.0.6-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-deeplabcut/0.0.6/noarch/napari-deeplabcut-0.0.6-pyhd8ed1ab_0.tar.bz2,conda,0.0.6,conda-forge,['main'],conda,noarch/napari-deeplabcut-0.0.7-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['dask-core', 'dask-image', 'napari <0.5.0', 'numpy', 'opencv', 'pandas', 'pytables', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image']",BSD-3-Clause,python,1666210461060.0,2022-10-19 20:16:47.136000+00:00,7702f497e42e67b8218fa47e12def0e3,None,24751.0,conda-forge/napari-deeplabcut/0.0.7/noarch/napari-deeplabcut-0.0.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-deeplabcut/0.0.7/noarch/napari-deeplabcut-0.0.7-pyhd8ed1ab_0.tar.bz2,conda,0.0.7,conda-forge,['main'],,,,napari-deeplabcut.write_hdf,Save keypoint annotations with napari DeepLabCut,napari_deeplabcut._writer:write_hdf,0.1.2,conda-forge/napari-deeplabcut/0.1.2,0.2.1,conda-forge/napari-deeplabcut/0.2.1,conda,noarch/napari-deeplabcut-0.0.9-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['dask-core', 'dask-image', 'napari <0.5.0', 'numpy', 'opencv', 'pandas', 'pytables', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image']",noarch,1670556554070.0,None-any-None,pyhd8ed1ab_0,2022-12-09 03:31:51.124000+00:00,c51fdc67985d1c45469d0e297ae117fc,95e24dfcf1201b9e948bb4fc0807fdb5079434c2ce8bcb19d4724a8e2a845705,30133.0,conda-forge/napari-deeplabcut/0.0.9/noarch/napari-deeplabcut-0.0.9-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-deeplabcut/0.0.9/noarch/napari-deeplabcut-0.0.9-pyhd8ed1ab_0.conda,conda,0.0.9,conda-forge,['main'],conda,noarch/napari-deeplabcut-0.1.2-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['dask-core', 'dask-image', 'napari <0.5.0', 'natsort', 'numpy', 'opencv', 'pandas', 'pytables', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image']",BSD-3-Clause,python,1682252194601.0,2023-04-23 12:18:33.501000+00:00,a9c6e8d7337d9e90f41b55cd5cf5daa5,004c14458bddd0ac9045fe18cb4474462d173295448e3855fbfb223cf5fcd14c,31977.0,conda-forge/napari-deeplabcut/0.1.2/noarch/napari-deeplabcut-0.1.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-deeplabcut/0.1.2/noarch/napari-deeplabcut-0.1.2-pyhd8ed1ab_0.conda,conda,0.1.2,conda-forge,['main'],napari-deeplabcut.write_masks,Save segmentation masks with napari DeepLabCut,napari_deeplabcut._writer:write_masks,napari-deeplabcut.make_keypoint_controls,Make keypoint controls,napari_deeplabcut._widgets:KeypointControls,,,,,,,,,,,,,['.h5'],,,,,,,,,,,,,conda,noarch/napari-deeplabcut-0.2.1-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['dask-core', 'dask-image', 'matplotlib-base >=3.3', 'napari <0.5.0', 'natsort', 'numpy', 'opencv', 'pandas', 'pytables', 'python >=3.8', 'pyyaml', 'qtpy >=2.4', 'scikit-image']",BSD-3-Clause,python,1698085156519.0,2023-10-23 18:22:16.508000+00:00,c16e4723901789c483db3d7ef40e65ed,f482b39b95c25027cf16edf8becbde754f0e87dcdefefb31401f0a3381a94fc9,130783.0,conda-forge/napari-deeplabcut/0.2.1/noarch/napari-deeplabcut-0.2.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-deeplabcut/0.2.1/noarch/napari-deeplabcut-0.2.1-pyhd8ed1ab_0.conda,conda,0.2.1,conda-forge,['main'],0.2.1.1,conda-forge/napari-deeplabcut/0.2.1.1,conda,noarch/napari-deeplabcut-0.2.1.1-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['dask-core', 'dask-image', 'matplotlib-base >=3.3', 'napari <0.5.0', 'natsort', 'numpy', 'opencv', 'pandas', 'pytables', 'python >=3.8', 'pyyaml', 'qtpy >=2.4', 'scikit-image']",BSD-3-Clause,1698191106172.0,2023-10-24 23:47:20.613000+00:00,ffe247b0799a0ababe3e85f74c2f96c3,99b332780d0eccb61f794d209b4f9e56110c9c0b5d6bb92ac87689a5b36096a0,130862.0,conda-forge/napari-deeplabcut/0.2.1.1/noarch/napari-deeplabcut-0.2.1.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-deeplabcut/0.2.1.1/noarch/napari-deeplabcut-0.2.1.1-pyhd8ed1ab_0.conda,conda,0.2.1.1,conda-forge,['main'],conda,noarch/napari-deeplabcut-0.2.1.2-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['dask-core', 'dask-image', 'matplotlib-base >=3.3', 'napari <0.5.0', 'natsort', 'numpy', 'opencv', 'pandas', 'pytables', 'python >=3.8', 'pyyaml', 'qtpy >=2.4', 'scikit-image']",BSD-3-Clause,1698191860332.0,2023-10-24 23:59:56.943000+00:00,999620dacd231d132fa3260bce4135f1,2720a5d3ea543004eecf3c5c4b34c347b3ad11b24be2f853fe7338ff4ecd988f,399419.0,conda-forge/napari-deeplabcut/0.2.1.2/noarch/napari-deeplabcut-0.2.1.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-deeplabcut/0.2.1.2/noarch/napari-deeplabcut-0.2.1.2-pyhd8ed1ab_0.conda,conda,0.2.1.2,conda-forge,['main'],conda,noarch/napari-deeplabcut-0.2.1.3-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['dask-core', 'dask-image', 'matplotlib-base >=3.3', 'napari <0.5.0', 'natsort', 'numpy', 'opencv', 'pandas', 'pytables', 'python >=3.8', 'pyyaml', 'qtpy >=2.4', 'scikit-image']",BSD-3-Clause,1702074277426.0,2023-12-08 22:27:38.443000+00:00,3cd1b0538ec57d5583bb0f5be755744c,196f6f69a832acd893898043e727c312657131199a744f99c9d23923ab6b5f9d,400715.0,conda-forge/napari-deeplabcut/0.2.1.3/noarch/napari-deeplabcut-0.2.1.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-deeplabcut/0.2.1.3/noarch/napari-deeplabcut-0.2.1.3-pyhd8ed1ab_0.conda,conda,0.2.1.3,conda-forge,['main'],,, -149,napari-deepmeta,2.1,napari DeepMeta,Mice lungs and metastases segmentation tool.,Edgar Lefevre,MIT,https://github.com/EdgarLefevre/napari-deepmeta,620a21f903b93eb2b19f8c8a,['conda'],,https://github.com/EdgarLefevre/napari-deepmeta,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-deepmeta,http://api.anaconda.org/packages/conda-forge/napari-deepmeta,http://anaconda.org/conda-forge/napari-deepmeta,['1.2'],1.2,1.2,['noarch'],3.0,,['pyhd8ed1ab_0'],1.2,conda-forge/napari-deepmeta/1.2,1.0,0.0,2022-02-14 09:33:42.938000+00:00,2023-06-18 08:40:51.481000+00:00,conda,noarch/napari-deepmeta-1.2-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['connected-components-3d', 'napari 0.4.8', 'napari-plugin-engine >=0.1.4', 'numpy', 'opencv', 'pyqt', 'pytest', 'pytest-cov', 'pytest-qt', 'pytest-xvfb', 'python >=3.6', 'qtpy >=1.9.0', 'scikit-image', 'tensorflow']",noarch,1644830996806.0,None-any-None,pyhd8ed1ab_0,2022-02-14 09:33:43.410000+00:00,102df61087b4f5ad6ebb25e0bdb7cdb0,None,13992861.0,conda-forge/napari-deepmeta/1.2/noarch/napari-deepmeta-1.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-deepmeta/1.2/noarch/napari-deepmeta-1.2-pyhd8ed1ab_0.tar.bz2,conda,1.2,conda-forge,['main'],public,,0.2.1,napari-deepmeta.make_qwidget,DeepmetaWidget,napari_deepmeta._widget:DeepmetaWidget,,,,2.1,napari-deepmeta,2.1,,Mice lungs and metastases segmentation tool.,"# napari-deepmeta +",text/markdown,https://github.com/DeepLabCut/napari-deeplabcut,"Team DeepLabCut, Lead by Jessy Lauer",admin@deeplabcut.org,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Artificial Intelligence', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Visualization']","['dask-image', 'matplotlib >=3.3', 'napari ==0.4.18', 'natsort', 'numpy', 'opencv-python-headless', 'pandas', 'pyyaml', 'qtpy >=2.4', 'scikit-image', 'scipy', 'tables', ""pyside6 ==6.4.2 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]",>=3.9,"['Bug Tracker, https://github.com/DeepLabCut/napari-deeplabcut/issues', 'Documentation, https://github.com/DeepLabCut/napari-deeplabcut#README.md', 'Source Code, https://github.com/DeepLabCut/napari-deeplabcut', 'User Support, https://github.com/DeepLabCut/napari-deeplabcut/issues']",['testing'],False,0.0.3,conda-forge/napari-deeplabcut/0.0.3,0.0.4,conda-forge/napari-deeplabcut/0.0.4,0.0.5,conda-forge/napari-deeplabcut/0.0.5,conda,noarch/napari-deeplabcut-0.0.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-image', 'napari <0.5.0', 'numpy', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image']",pyhd8ed1ab_0,1657120927654.0,None-any-None,noarch,2022-07-06 15:24:13.190000+00:00,91c53d8e1ac98f709a506c197062afd0,None,20691.0,conda-forge/napari-deeplabcut/0.0.3/noarch/napari-deeplabcut-0.0.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-deeplabcut/0.0.3/noarch/napari-deeplabcut-0.0.3-pyhd8ed1ab_0.tar.bz2,conda,0.0.3,conda-forge,['main'],conda,noarch/napari-deeplabcut-0.0.3-pyhd8ed1ab_1.tar.bz2,1.0,BSD-3-Clause,False,python,"['dask-image', 'napari <0.5.0', 'numpy', 'pandas', 'pytables', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image']",noarch,1657237177249.0,None-any-None,pyhd8ed1ab_1,2022-07-07 23:42:03.754000+00:00,04edf7c83b48b4613df0b9907b37595b,None,20635.0,conda-forge/napari-deeplabcut/0.0.3/noarch/napari-deeplabcut-0.0.3-pyhd8ed1ab_1.tar.bz2,//api.anaconda.org/download/conda-forge/napari-deeplabcut/0.0.3/noarch/napari-deeplabcut-0.0.3-pyhd8ed1ab_1.tar.bz2,conda,0.0.3,conda-forge,['main'],conda,noarch/napari-deeplabcut-0.0.4-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['dask-core', 'dask-image', 'napari <0.5.0', 'numpy', 'opencv', 'pandas', 'pytables', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image']",BSD-3-Clause,python,1660338057174.0,2022-08-12 21:03:14.570000+00:00,eb0ea449795728ae3f96405e1837a8c9,None,22200.0,conda-forge/napari-deeplabcut/0.0.4/noarch/napari-deeplabcut-0.0.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-deeplabcut/0.0.4/noarch/napari-deeplabcut-0.0.4-pyhd8ed1ab_0.tar.bz2,conda,0.0.4,conda-forge,['main'],,napari-deeplabcut.get_image_reader,Open images with napari DeepLabCut,napari_deeplabcut._reader:get_image_reader,napari-deeplabcut.get_video_reader,Open videos with napari DeepLabCut,napari_deeplabcut._reader:get_video_reader,napari-deeplabcut.get_folder_parser,Open folder with napari DeepLabCut,napari_deeplabcut._reader:get_folder_parser,napari-deeplabcut.make_keypoint_controls,Keypoint controls,False,,,,,,,,,,napari-deeplabcut.get_config_reader,Open config with napari DeepLabCut,napari_deeplabcut._reader:get_config_reader,napari-deeplabcut.write_hdf,['points{1}'],,napari-deeplabcut.write_masks,['shapes{1}'],['.csv'],,,,,0.0.6,conda-forge/napari-deeplabcut/0.0.6,0.0.7,conda-forge/napari-deeplabcut/0.0.7,0.0.9,conda-forge/napari-deeplabcut/0.0.9,conda,noarch/napari-deeplabcut-0.0.5-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core', 'dask-image', 'napari <0.5.0', 'numpy', 'opencv', 'pandas', 'pytables', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image']",noarch,1661968431295.0,None-any-None,pyhd8ed1ab_0,2022-08-31 17:56:48.984000+00:00,c6706d8c1b2b13d0a8871863ee9bb6c5,None,23837.0,conda-forge/napari-deeplabcut/0.0.5/noarch/napari-deeplabcut-0.0.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-deeplabcut/0.0.5/noarch/napari-deeplabcut-0.0.5-pyhd8ed1ab_0.tar.bz2,conda,0.0.5,conda-forge,['main'],conda,noarch/napari-deeplabcut-0.0.6-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core', 'dask-image', 'napari <0.5.0', 'numpy', 'opencv', 'pandas', 'pytables', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image']",noarch,1662425389256.0,None-any-None,pyhd8ed1ab_0,2022-09-06 00:52:32.504000+00:00,b5741759306057c745e6b8d9a67c738f,None,24750.0,conda-forge/napari-deeplabcut/0.0.6/noarch/napari-deeplabcut-0.0.6-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-deeplabcut/0.0.6/noarch/napari-deeplabcut-0.0.6-pyhd8ed1ab_0.tar.bz2,conda,0.0.6,conda-forge,['main'],conda,noarch/napari-deeplabcut-0.0.7-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['dask-core', 'dask-image', 'napari <0.5.0', 'numpy', 'opencv', 'pandas', 'pytables', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image']",BSD-3-Clause,python,1666210461060.0,2022-10-19 20:16:47.136000+00:00,7702f497e42e67b8218fa47e12def0e3,None,24751.0,conda-forge/napari-deeplabcut/0.0.7/noarch/napari-deeplabcut-0.0.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-deeplabcut/0.0.7/noarch/napari-deeplabcut-0.0.7-pyhd8ed1ab_0.tar.bz2,conda,0.0.7,conda-forge,['main'],,,,napari-deeplabcut.write_hdf,Save keypoint annotations with napari DeepLabCut,napari_deeplabcut._writer:write_hdf,0.1.2,conda-forge/napari-deeplabcut/0.1.2,0.2.1,conda-forge/napari-deeplabcut/0.2.1,conda,noarch/napari-deeplabcut-0.0.9-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['dask-core', 'dask-image', 'napari <0.5.0', 'numpy', 'opencv', 'pandas', 'pytables', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image']",noarch,1670556554070.0,None-any-None,pyhd8ed1ab_0,2022-12-09 03:31:51.124000+00:00,c51fdc67985d1c45469d0e297ae117fc,95e24dfcf1201b9e948bb4fc0807fdb5079434c2ce8bcb19d4724a8e2a845705,30133.0,conda-forge/napari-deeplabcut/0.0.9/noarch/napari-deeplabcut-0.0.9-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-deeplabcut/0.0.9/noarch/napari-deeplabcut-0.0.9-pyhd8ed1ab_0.conda,conda,0.0.9,conda-forge,['main'],conda,noarch/napari-deeplabcut-0.1.2-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['dask-core', 'dask-image', 'napari <0.5.0', 'natsort', 'numpy', 'opencv', 'pandas', 'pytables', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image']",BSD-3-Clause,python,1682252194601.0,2023-04-23 12:18:33.501000+00:00,a9c6e8d7337d9e90f41b55cd5cf5daa5,004c14458bddd0ac9045fe18cb4474462d173295448e3855fbfb223cf5fcd14c,31977.0,conda-forge/napari-deeplabcut/0.1.2/noarch/napari-deeplabcut-0.1.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-deeplabcut/0.1.2/noarch/napari-deeplabcut-0.1.2-pyhd8ed1ab_0.conda,conda,0.1.2,conda-forge,['main'],napari-deeplabcut.write_masks,Save segmentation masks with napari DeepLabCut,napari_deeplabcut._writer:write_masks,napari-deeplabcut.make_keypoint_controls,Make keypoint controls,napari_deeplabcut._widgets:KeypointControls,,,,,,,,,,['.h5'],,,,,,,,,,,,,conda,noarch/napari-deeplabcut-0.2.1-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['dask-core', 'dask-image', 'matplotlib-base >=3.3', 'napari <0.5.0', 'natsort', 'numpy', 'opencv', 'pandas', 'pytables', 'python >=3.8', 'pyyaml', 'qtpy >=2.4', 'scikit-image']",BSD-3-Clause,python,1698085156519.0,2023-10-23 18:22:16.508000+00:00,c16e4723901789c483db3d7ef40e65ed,f482b39b95c25027cf16edf8becbde754f0e87dcdefefb31401f0a3381a94fc9,130783.0,conda-forge/napari-deeplabcut/0.2.1/noarch/napari-deeplabcut-0.2.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-deeplabcut/0.2.1/noarch/napari-deeplabcut-0.2.1-pyhd8ed1ab_0.conda,conda,0.2.1,conda-forge,['main'],conda,noarch/napari-deeplabcut-0.2.1.1-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['dask-core', 'dask-image', 'matplotlib-base >=3.3', 'napari <0.5.0', 'natsort', 'numpy', 'opencv', 'pandas', 'pytables', 'python >=3.8', 'pyyaml', 'qtpy >=2.4', 'scikit-image']",BSD-3-Clause,python,1698191106172.0,2023-10-24 23:47:20.613000+00:00,ffe247b0799a0ababe3e85f74c2f96c3,99b332780d0eccb61f794d209b4f9e56110c9c0b5d6bb92ac87689a5b36096a0,130862.0,conda-forge/napari-deeplabcut/0.2.1.1/noarch/napari-deeplabcut-0.2.1.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-deeplabcut/0.2.1.1/noarch/napari-deeplabcut-0.2.1.1-pyhd8ed1ab_0.conda,conda,0.2.1.1,conda-forge,['main'],0.2.1.1,conda-forge/napari-deeplabcut/0.2.1.1,conda,noarch/napari-deeplabcut-0.2.1.2-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['dask-core', 'dask-image', 'matplotlib-base >=3.3', 'napari <0.5.0', 'natsort', 'numpy', 'opencv', 'pandas', 'pytables', 'python >=3.8', 'pyyaml', 'qtpy >=2.4', 'scikit-image']",BSD-3-Clause,1698191860332.0,2023-10-24 23:59:56.943000+00:00,999620dacd231d132fa3260bce4135f1,2720a5d3ea543004eecf3c5c4b34c347b3ad11b24be2f853fe7338ff4ecd988f,399419.0,conda-forge/napari-deeplabcut/0.2.1.2/noarch/napari-deeplabcut-0.2.1.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-deeplabcut/0.2.1.2/noarch/napari-deeplabcut-0.2.1.2-pyhd8ed1ab_0.conda,conda,0.2.1.2,conda-forge,['main'],0.2.1.2,conda-forge/napari-deeplabcut/0.2.1.2,conda,noarch/napari-deeplabcut-0.2.1.3-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['dask-core', 'dask-image', 'matplotlib-base >=3.3', 'napari <0.5.0', 'natsort', 'numpy', 'opencv', 'pandas', 'pytables', 'python >=3.8', 'pyyaml', 'qtpy >=2.4', 'scikit-image']",BSD-3-Clause,1702074277426.0,2023-12-08 22:27:38.443000+00:00,3cd1b0538ec57d5583bb0f5be755744c,196f6f69a832acd893898043e727c312657131199a744f99c9d23923ab6b5f9d,400715.0,conda-forge/napari-deeplabcut/0.2.1.3/noarch/napari-deeplabcut-0.2.1.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-deeplabcut/0.2.1.3/noarch/napari-deeplabcut-0.2.1.3-pyhd8ed1ab_0.conda,conda,0.2.1.3,conda-forge,['main'],conda,noarch/napari-deeplabcut-0.2.1.7-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['dask-core', 'dask-image', 'matplotlib-base >=3.3', 'napari <0.5.0', 'natsort', 'numpy', 'opencv', 'pandas', 'pytables', 'python >=3.9', 'pyyaml', 'qtpy >=2.4', 'scikit-image', 'scipy']",BSD-3-Clause,2024-07-11 10:17:50.125000+00:00,11ecddb1ca71603db0499543ae6b9f44,a7a47e3edbeb62c0a7e1cc257faff7ca6bbabdd86777e99ef468dc2214905a32,838375.0,conda-forge/napari-deeplabcut/0.2.1.7/noarch/napari-deeplabcut-0.2.1.7-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-deeplabcut/0.2.1.7/noarch/napari-deeplabcut-0.2.1.7-pyhd8ed1ab_0.conda,conda,0.2.1.7,conda-forge,['main'],,, +157,napari-deepmeta,2.1,napari DeepMeta,Mice lungs and metastases segmentation tool.,Edgar Lefevre,MIT,https://github.com/EdgarLefevre/napari-deepmeta,620a21f903b93eb2b19f8c8a,['conda'],,https://github.com/EdgarLefevre/napari-deepmeta,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-deepmeta,http://api.anaconda.org/packages/conda-forge/napari-deepmeta,http://anaconda.org/conda-forge/napari-deepmeta,['1.2'],1.2,1.2,['noarch'],3.0,,['pyhd8ed1ab_0'],1.2,conda-forge/napari-deepmeta/1.2,1.0,0.0,2022-02-14 09:33:42.938000+00:00,2023-06-18 08:40:51.481000+00:00,conda,noarch/napari-deepmeta-1.2-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['connected-components-3d', 'napari 0.4.8', 'napari-plugin-engine >=0.1.4', 'numpy', 'opencv', 'pyqt', 'pytest', 'pytest-cov', 'pytest-qt', 'pytest-xvfb', 'python >=3.6', 'qtpy >=1.9.0', 'scikit-image', 'tensorflow']",noarch,1644830996806.0,None-any-None,pyhd8ed1ab_0,2022-02-14 09:33:43.410000+00:00,102df61087b4f5ad6ebb25e0bdb7cdb0,None,13992861.0,conda-forge/napari-deepmeta/1.2/noarch/napari-deepmeta-1.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-deepmeta/1.2/noarch/napari-deepmeta-1.2-pyhd8ed1ab_0.tar.bz2,conda,1.2,conda-forge,['main'],public,,0.2.1,napari-deepmeta.make_qwidget,DeepmetaWidget,napari_deepmeta._widget:DeepmetaWidget,,,,2.1,napari-deepmeta,2.1,,Mice lungs and metastases segmentation tool.,"# napari-deepmeta [![License MIT](https://img.shields.io/pypi/l/napari-deepmeta.svg?color=green)](https://github.com/EdgarLefevre/napari-deepmeta/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-deepmeta.svg?color=green)](https://pypi.org/project/napari-deepmeta) @@ -16296,8 +17066,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/EdgarLefevre/napari-deepmeta,Edgar Lefevre,lefevreedg@gmail.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['connected-components-3d', 'magicgui', 'napari', 'numpy', 'opencv-python', 'qtpy', 'scikit-image', 'torch', ""connected-components-3d ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""opencv-python ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/EdgarLefevre/napari-deepmeta/issues', 'Documentation, https://github.com/EdgarLefevre/napari-deepmeta#README.md', 'Source Code, https://github.com/EdgarLefevre/napari-deepmeta', 'User Support, https://github.com/EdgarLefevre/napari-deepmeta/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-deepmeta.make_qwidget2,DeepmetaDemoWidget,napari_deepmeta._widget:DeepmetaDemoWidget,,,,,,,napari-deepmeta.make_qwidget,DeepmetaWidget,False,napari-deepmeta.make_qwidget2,DeepmetaDemoWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -150,napari-DeepSpot,0.0.7,napari-DeepSpot,RNA spot enhancement for fluorescent microscopy images,Emmanuel Bouilhol,MIT,https://github.com/ebouilhol/napari-DeepSpot,621635e06526fc1f99f0b677,['conda'],,https://github.com/ebouilhol/napari-DeepSpot,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-deepspot,http://api.anaconda.org/packages/conda-forge/napari-deepspot,http://anaconda.org/conda-forge/napari-deepspot,['0.0.7'],0.0.7,0.0.7,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.7,conda-forge/napari-deepspot/0.0.7,1.0,0.0,2022-02-23 13:25:47.320000+00:00,2023-06-18 08:40:55.603000+00:00,conda,noarch/napari-deepspot-0.0.7-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'opencv', 'python >=3.7', 'qtpy >=1.9.0', 'scikit-image', 'tensorflow']",noarch,1645622474010.0,None-any-None,pyhd8ed1ab_0,2022-02-23 13:25:48.208000+00:00,28410f5f7c041c8f580bb59fae6cc7d9,None,91805793.0,conda-forge/napari-deepspot/0.0.7/noarch/napari-deepspot-0.0.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-deepspot/0.0.7/noarch/napari-deepspot-0.0.7-pyhd8ed1ab_0.tar.bz2,conda,0.0.7,conda-forge,['main'],public,,0.2.1,napari-DeepSpot.EnhanceSpot,EnhanceSpot,napari_deepspot._dock_widget:EnhanceSpot,,,,2.1,napari-DeepSpot,0.0.7,['UNKNOWN'],RNA spot enhancement for fluorescent microscopy images,"# napari-DeepSpot +",text/markdown,https://github.com/EdgarLefevre/napari-deepmeta,Edgar Lefevre,lefevreedg@gmail.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['connected-components-3d', 'magicgui', 'napari', 'numpy', 'opencv-python', 'qtpy', 'scikit-image', 'torch', ""connected-components-3d ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""opencv-python ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/EdgarLefevre/napari-deepmeta/issues', 'Documentation, https://github.com/EdgarLefevre/napari-deepmeta#README.md', 'Source Code, https://github.com/EdgarLefevre/napari-deepmeta', 'User Support, https://github.com/EdgarLefevre/napari-deepmeta/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-deepmeta.make_qwidget2,DeepmetaDemoWidget,napari_deepmeta._widget:DeepmetaDemoWidget,,,,,,,napari-deepmeta.make_qwidget,DeepmetaWidget,False,napari-deepmeta.make_qwidget2,DeepmetaDemoWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +158,napari-DeepSpot,0.0.7,napari-DeepSpot,RNA spot enhancement for fluorescent microscopy images,Emmanuel Bouilhol,MIT,https://github.com/ebouilhol/napari-DeepSpot,621635e06526fc1f99f0b677,['conda'],,https://github.com/ebouilhol/napari-DeepSpot,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-deepspot,http://api.anaconda.org/packages/conda-forge/napari-deepspot,http://anaconda.org/conda-forge/napari-deepspot,['0.0.7'],0.0.7,0.0.7,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.7,conda-forge/napari-deepspot/0.0.7,1.0,0.0,2022-02-23 13:25:47.320000+00:00,2023-06-18 08:40:55.603000+00:00,conda,noarch/napari-deepspot-0.0.7-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'opencv', 'python >=3.7', 'qtpy >=1.9.0', 'scikit-image', 'tensorflow']",noarch,1645622474010.0,None-any-None,pyhd8ed1ab_0,2022-02-23 13:25:48.208000+00:00,28410f5f7c041c8f580bb59fae6cc7d9,None,91805793.0,conda-forge/napari-deepspot/0.0.7/noarch/napari-deepspot-0.0.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-deepspot/0.0.7/noarch/napari-deepspot-0.0.7-pyhd8ed1ab_0.tar.bz2,conda,0.0.7,conda-forge,['main'],public,,0.2.1,napari-DeepSpot.EnhanceSpot,EnhanceSpot,napari_deepspot._dock_widget:EnhanceSpot,,,,2.1,napari-DeepSpot,0.0.7,['UNKNOWN'],RNA spot enhancement for fluorescent microscopy images,"# napari-DeepSpot [![License](https://img.shields.io/pypi/l/napari-DeepSpot.svg?color=green)](https://github.com/ebouilhol/napari-DeepSpot/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-DeepSpot.svg?color=green)](https://pypi.org/project/napari-DeepSpot) @@ -16418,8 +17188,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/ebouilhol/napari-DeepSpot,Emmanuel Bouilhol,emmanuel.bouilhol@u-bordeaux.fr,MIT,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'pytest', 'pytest-cov', 'pytest-xvfb', 'pytest-qt', 'napari', 'qtpy (==1.9.0)', 'pyqt5', 'tensorflow', 'scikit-image', 'opencv-python']",>=3.7,"['Bug Tracker, https://github.com/ebouilhol/napari-DeepSpot/issues', 'Documentation, https://github.com/ebouilhol/napari-DeepSpot#README.md', 'Source Code, https://github.com/ebouilhol/napari-DeepSpot', 'User Support, https://github.com/ebouilhol/napari-DeepSpot/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-DeepSpot.EnhanceSpot,EnhanceSpot,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -151,napari-demo,0.2.5,Demo plugin ported from npe2 example,example plugin for napari plugin developers,napari hub team,BSD-3,https://github.com/chanzuckerberg/napari-demo,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,hidden,,0.2.1,napari-demo.about,About napari demo plugin,napari_demo:about,napari-demo.some_reader,"['*.fzy', '*.fzzy']",True,2.1,napari-demo,0.2.5,,example plugin for napari plugin developers,"# napari-demo +",text/markdown,https://github.com/ebouilhol/napari-DeepSpot,Emmanuel Bouilhol,emmanuel.bouilhol@u-bordeaux.fr,MIT,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'pytest', 'pytest-cov', 'pytest-xvfb', 'pytest-qt', 'napari', 'qtpy (==1.9.0)', 'pyqt5', 'tensorflow', 'scikit-image', 'opencv-python']",>=3.7,"['Bug Tracker, https://github.com/ebouilhol/napari-DeepSpot/issues', 'Documentation, https://github.com/ebouilhol/napari-DeepSpot#README.md', 'Source Code, https://github.com/ebouilhol/napari-DeepSpot', 'User Support, https://github.com/ebouilhol/napari-DeepSpot/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-DeepSpot.EnhanceSpot,EnhanceSpot,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +159,napari-demo,0.2.5,Demo plugin ported from npe2 example,example plugin for napari plugin developers,napari hub team,BSD-3,https://github.com/chanzuckerberg/napari-demo,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,hidden,,0.2.1,napari-demo.about,About napari demo plugin,napari_demo:about,napari-demo.some_reader,"['*.fzy', '*.fzzy']",True,2.1,napari-demo,0.2.5,,example plugin for napari plugin developers,"# napari-demo [![License](https://img.shields.io/pypi/l/napari-demo.svg?color=green)](https://github.com/chanzuckerberg/napari-demo/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-demo.svg?color=green)](https://pypi.org/project/napari-demo) @@ -16483,8 +17253,8 @@ To report security issues, see [security](SECURITY.md) This project adheres to the Contributor Covenant [code of conduct](https://github.com/chanzuckerberg/.github/blob/master/CODE_OF_CONDUCT.md). By participating, you are expected to uphold this code. Please report unacceptable behavior to [opensource@chanzuckerberg.com](mailto:opensource@chanzuckerberg.com). -",text/markdown,https://github.com/chanzuckerberg/napari-demo,napari hub team,team@napari-hub.org,BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Programming Language :: Python', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing', 'Operating System :: OS Independent', 'Framework :: napari']","['pydantic', 'npe2', 'numpy']",>=3.7,"['Source Code, https://github.com/chanzuckerberg/napari-demo']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Acquisition', 'Dataset', 'Segmentation']",napari-demo.hello_world,send,napari_demo:hello_world,napari-demo.some_reader,Some Reader,napari_demo:get_reader,napari-demo.url_reader,URL Reader,napari_demo:url_reader,napari-demo.image_arithmetic,calculate a new layer arithmetically from two existing layers,True,,,,,,,,,,napari-demo.my_writer,My Multi-layer Writer,napari_demo:writer_function,napari-demo.my_writer,"['image{2,4}', 'tracks?']",,napari-demo.my_writer,"['points{1}', 'surface+']","['.pcd', '.e57']",,napari-demo.generate_random_data,random_data,Some Random Data (10 x 10 x 10),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-demo.my_single_writer,My single-layer Writer,napari_demo:writer_function_single,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-demo.generate_random_data,Generate uniform random data,napari_demo:random_data,napari-demo.image_arithmetic,Create widget from my function,napari_demo:image_arithmetic,,,,,,,,,,,,,"['.tif', '.tiff']",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -152,napari-denoiseg,0.0.1rc2,DenoiSeg,A napari plugin performing joint denoising and segmentation of microscopy images using DenoiSeg.,"Tom Burke, Joran Deschamps",BSD-3-Clause,https://github.com/juglab/napari_denoiseg,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-denoiseg.make_train_widget,DenoiSeg train,napari_denoiseg._train_widget:TrainingWidgetWrapper,,,,2.1,napari-denoiseg,0.0.1rc2,,A napari plugin performing joint denoising and segmentation of microscopy images using DenoiSeg.,"# napari-denoiseg +",text/markdown,https://github.com/chanzuckerberg/napari-demo,napari hub team,team@napari-hub.org,BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Programming Language :: Python', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing', 'Operating System :: OS Independent', 'Framework :: napari']","['pydantic', 'npe2', 'numpy']",>=3.7,"['Source Code, https://github.com/chanzuckerberg/napari-demo']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Acquisition', 'Dataset', 'Segmentation']",napari-demo.hello_world,send,napari_demo:hello_world,napari-demo.some_reader,Some Reader,napari_demo:get_reader,napari-demo.url_reader,URL Reader,napari_demo:url_reader,napari-demo.image_arithmetic,calculate a new layer arithmetically from two existing layers,True,,,,,,,,,,napari-demo.my_writer,My Multi-layer Writer,napari_demo:writer_function,napari-demo.my_writer,"['image{2,4}', 'tracks?']",,napari-demo.my_writer,"['points{1}', 'surface+']","['.pcd', '.e57']",,napari-demo.generate_random_data,random_data,Some Random Data (10 x 10 x 10),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-demo.my_single_writer,My single-layer Writer,napari_demo:writer_function_single,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-demo.generate_random_data,Generate uniform random data,napari_demo:random_data,napari-demo.image_arithmetic,Create widget from my function,napari_demo:image_arithmetic,,,,,,,,,,"['.tif', '.tiff']",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +160,napari-denoiseg,0.0.1rc2,DenoiSeg,A napari plugin performing joint denoising and segmentation of microscopy images using DenoiSeg.,"Tom Burke, Joran Deschamps",BSD-3-Clause,https://github.com/juglab/napari_denoiseg,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-denoiseg.make_train_widget,DenoiSeg train,napari_denoiseg._train_widget:TrainingWidgetWrapper,,,,2.1,napari-denoiseg,0.0.1rc2,,A napari plugin performing joint denoising and segmentation of microscopy images using DenoiSeg.,"# napari-denoiseg [![License](https://img.shields.io/pypi/l/napari-denoiseg.svg?color=green)](https://github.com/juglab/napari-denoiseg/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-denoiseg.svg?color=green)](https://pypi.org/project/napari-denoiseg) @@ -16557,8 +17327,8 @@ Distributed under the terms of the [BSD-3] license, [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/juglab/napari_denoiseg,"Tom Burke, Joran Deschamps",joran.deschamps@fht.org,BSD-3-Clause,"['Framework :: napari', 'Development Status :: 3 - Alpha', 'Intended Audience :: Science/Research', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['numpy', 'pyqtgraph', 'denoiseg (>=0.3.0)', 'bioimageio.core', 'magicgui', 'qtpy', 'napari-time-slicer (>=0.4.9)', 'napari (<=0.4.15)', 'vispy (<=0.9.6)', 'imageio (!=2.11.0,!=2.22.1,>=2.5.0)', 'tensorflow ; platform_system != ""Darwin"" or platform_machine != ""arm64""', 'tensorflow-macos ; platform_system == ""Darwin"" and platform_machine == ""arm64""', 'tensorflow-metal ; platform_system == ""Darwin"" and platform_machine == ""arm64""', ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.7,"['Bug Tracker, https://github.com/juglab/napari_denoiseg/issues', 'Documentation, https://juglab.github.io/napari-denoiseg/', 'Source Code, https://github.com/juglab/napari_denoiseg', 'User Support, https://github.com/juglab/napari_denoiseg/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-denoiseg.make_predict_widget,DenoiSeg predict,napari_denoiseg._predict_widget:PredictWidgetWrapper,napari-denoiseg.make_threshold_widget,DenoiSeg threshold optimizer,napari_denoiseg._threshold_widget:ThresholdWidgetWrapper,napari-denoiseg.make_denoiseg_demo_prediction,Make DenoiSeg demo prediction,napari_denoiseg._predict_widget:DemoPrediction,napari-denoiseg.make_train_widget,DenoiSeg train,False,napari-denoiseg.make_predict_widget,DenoiSeg predict,False,napari-denoiseg.make_threshold_widget,DenoiSeg threshold optimizer,False,napari-denoiseg.make_denoiseg_demo_prediction,DenoiSeg Demo prediction,False,napari-denoiseg.denoiseg_data_2D_n0,DenoiSeg sample 2D data (n0),napari_denoiseg._sample_data:denoiseg_data_2D_n0,,,,,,,,napari-denoiseg.denoiseg_data_2D_n0,denoiseg_data_2D_n0,Download 2D data (n0 noise),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-denoiseg.denoiseg_data_2D_n10,denoiseg_data_2D_n10,Download 2D data (n10 noise),napari-denoiseg.denoiseg_data_2D_n10,DenoiSeg sample 2D data (n10),napari_denoiseg._sample_data:denoiseg_data_2D_n10,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-denoiseg.denoiseg_data_2D_n20,DenoiSeg sample 2D data (n20),napari_denoiseg._sample_data:denoiseg_data_2D_n20,napari-denoiseg.denoiseg_data_3D_n10,DenoiSeg sample 3D data (n10),napari_denoiseg._sample_data:denoiseg_data_3D_n10,napari-denoiseg.denoiseg_data_3D_n20,DenoiSeg sample 3D data (n20),napari_denoiseg._sample_data:denoiseg_data_3D_n20,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-denoiseg.denoiseg_data_2D_n20,denoiseg_data_2D_n20,Download 2D data (n20 noise) -153,napari-dexp,0.0.7,DEXP,A simple plugin to use with napari,Jordao Bragantini,BSD-3,https://github.com/royerlab/napari-dexp,6246ee9b13ef1fb79e4dcf73,['conda'],,https://github.com/royerlab/napari-dexp,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-dexp,http://api.anaconda.org/packages/conda-forge/napari-dexp,http://anaconda.org/conda-forge/napari-dexp,"['0.0.4', '0.0.7']",0.0.7,0.0.7,['noarch'],4.0,,['pyhd8ed1ab_0'],0.0.4,conda-forge/napari-dexp/0.0.4,1.0,0.0,2022-04-01 12:22:49.067000+00:00,2023-06-18 08:41:10.165000+00:00,conda,noarch/napari-dexp-0.0.4-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dexp', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7']",noarch,1648815615862.0,None-any-None,pyhd8ed1ab_0,2022-04-01 12:22:49.534000+00:00,b6422ccc015d169e98ef3f49cdd8f88c,None,10650.0,conda-forge/napari-dexp/0.0.4/noarch/napari-dexp-0.0.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-dexp/0.0.4/noarch/napari-dexp-0.0.4-pyhd8ed1ab_0.tar.bz2,conda,0.0.4,conda-forge,['main'],public,,0.1.0,napari-dexp.get_reader,Get Reader,napari_dexp._reader:napari_get_reader,napari-dexp.get_reader,"['*.zarr', '*.zarr.zip']",True,2.1,napari-dexp,0.0.7,,A simple plugin to use with napari,"# napari-DEXP +",text/markdown,https://github.com/juglab/napari_denoiseg,"Tom Burke, Joran Deschamps",joran.deschamps@fht.org,BSD-3-Clause,"['Framework :: napari', 'Development Status :: 3 - Alpha', 'Intended Audience :: Science/Research', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['numpy', 'pyqtgraph', 'denoiseg (>=0.3.0)', 'bioimageio.core', 'magicgui', 'qtpy', 'napari-time-slicer (>=0.4.9)', 'napari (<=0.4.15)', 'vispy (<=0.9.6)', 'imageio (!=2.11.0,!=2.22.1,>=2.5.0)', 'tensorflow ; platform_system != ""Darwin"" or platform_machine != ""arm64""', 'tensorflow-macos ; platform_system == ""Darwin"" and platform_machine == ""arm64""', 'tensorflow-metal ; platform_system == ""Darwin"" and platform_machine == ""arm64""', ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.7,"['Bug Tracker, https://github.com/juglab/napari_denoiseg/issues', 'Documentation, https://juglab.github.io/napari-denoiseg/', 'Source Code, https://github.com/juglab/napari_denoiseg', 'User Support, https://github.com/juglab/napari_denoiseg/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-denoiseg.make_predict_widget,DenoiSeg predict,napari_denoiseg._predict_widget:PredictWidgetWrapper,napari-denoiseg.make_threshold_widget,DenoiSeg threshold optimizer,napari_denoiseg._threshold_widget:ThresholdWidgetWrapper,napari-denoiseg.make_denoiseg_demo_prediction,Make DenoiSeg demo prediction,napari_denoiseg._predict_widget:DemoPrediction,napari-denoiseg.make_train_widget,DenoiSeg train,False,napari-denoiseg.make_predict_widget,DenoiSeg predict,False,napari-denoiseg.make_threshold_widget,DenoiSeg threshold optimizer,False,napari-denoiseg.make_denoiseg_demo_prediction,DenoiSeg Demo prediction,False,napari-denoiseg.denoiseg_data_2D_n0,DenoiSeg sample 2D data (n0),napari_denoiseg._sample_data:denoiseg_data_2D_n0,,,,,,,,napari-denoiseg.denoiseg_data_2D_n0,denoiseg_data_2D_n0,Download 2D data (n0 noise),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-denoiseg.denoiseg_data_2D_n10,denoiseg_data_2D_n10,Download 2D data (n10 noise),napari-denoiseg.denoiseg_data_2D_n10,DenoiSeg sample 2D data (n10),napari_denoiseg._sample_data:denoiseg_data_2D_n10,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-denoiseg.denoiseg_data_2D_n20,DenoiSeg sample 2D data (n20),napari_denoiseg._sample_data:denoiseg_data_2D_n20,napari-denoiseg.denoiseg_data_3D_n10,DenoiSeg sample 3D data (n10),napari_denoiseg._sample_data:denoiseg_data_3D_n10,napari-denoiseg.denoiseg_data_3D_n20,DenoiSeg sample 3D data (n20),napari_denoiseg._sample_data:denoiseg_data_3D_n20,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-denoiseg.denoiseg_data_2D_n20,denoiseg_data_2D_n20,Download 2D data (n20 noise) +161,napari-dexp,0.0.7,DEXP,A simple plugin to use with napari,Jordao Bragantini,BSD-3,https://github.com/royerlab/napari-dexp,6246ee9b13ef1fb79e4dcf73,['conda'],,https://github.com/royerlab/napari-dexp,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-dexp,http://api.anaconda.org/packages/conda-forge/napari-dexp,http://anaconda.org/conda-forge/napari-dexp,"['0.0.4', '0.0.7']",0.0.7,0.0.7,['noarch'],4.0,,['pyhd8ed1ab_0'],0.0.4,conda-forge/napari-dexp/0.0.4,1.0,0.0,2022-04-01 12:22:49.067000+00:00,2023-06-18 08:41:10.165000+00:00,conda,noarch/napari-dexp-0.0.4-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dexp', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7']",noarch,1648815615862.0,None-any-None,pyhd8ed1ab_0,2022-04-01 12:22:49.534000+00:00,b6422ccc015d169e98ef3f49cdd8f88c,None,10650.0,conda-forge/napari-dexp/0.0.4/noarch/napari-dexp-0.0.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-dexp/0.0.4/noarch/napari-dexp-0.0.4-pyhd8ed1ab_0.tar.bz2,conda,0.0.4,conda-forge,['main'],public,,0.1.0,napari-dexp.get_reader,Get Reader,napari_dexp._reader:napari_get_reader,napari-dexp.get_reader,"['*.zarr', '*.zarr.zip']",True,2.1,napari-dexp,0.0.7,,A simple plugin to use with napari,"# napari-DEXP [![License](https://img.shields.io/pypi/l/napari-dexp.svg?color=green)](https://github.com/royerlab/napari-dexp/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-dexp.svg?color=green)](https://pypi.org/project/napari-dexp) @@ -16615,8 +17385,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/royerlab/napari-dexp,Jordao Bragantini,jordao.bragantini@czbiohub.org,BSD-3,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari', 'napari-plugin-engine (>=0.1.4)', 'dexp', 'numpy']",>=3.7,,,False,0.0.7,conda-forge/napari-dexp/0.0.7,,,,,conda,noarch/napari-dexp-0.0.7-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dexp', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7']",pyhd8ed1ab_0,1656091148771.0,None-any-None,noarch,2022-06-24 17:21:30.270000+00:00,2703bcc0fa3ef40b50e0de9cd734e592,None,11072.0,conda-forge/napari-dexp/0.0.7/noarch/napari-dexp-0.0.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-dexp/0.0.7/noarch/napari-dexp-0.0.7-pyhd8ed1ab_0.tar.bz2,conda,0.0.7,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-dexp.write_image,Write Image,napari_dexp._writer:napari_write_image,napari-dexp.write_labels,Write Labels,napari_dexp._writer:napari_write_labels,,,,,,,,,,,,,,,,,,,napari-dexp.write_image,['image'],image,napari-dexp.write_labels,['labels'],['.zarr'],labels,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['.zarr'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -154,napari-dv,0.3.0,napari-dv,Deltavision/MRC file reader for napari,Talley Lambert,MIT,https://github.com/tlambert03/napari-dv,61fa687f414b5ba20eb11f28,['conda'],,https://github.com/tlambert03/napari-dv,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-dv,http://api.anaconda.org/packages/conda-forge/napari-dv,http://anaconda.org/conda-forge/napari-dv,"['0.2.6', '0.3.0']",0.2.6,0.3.0,['noarch'],4.0,,['pyhd8ed1ab_0'],0.2.6,conda-forge/napari-dv/0.2.6,1.0,0.0,2022-02-02 11:18:20.190000+00:00,2023-07-10 11:37:20.347000+00:00,conda,noarch/napari-dv-0.2.6-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['mrc >=0.1.5', 'napari-plugin-engine >=0.1.4', 'python >=3.7']",noarch,1643800667286.0,None-any-None,pyhd8ed1ab_0,2022-02-02 11:18:20.943000+00:00,b2822b4fb24a9688c23cf19b2001c98d,None,8267.0,conda-forge/napari-dv/0.2.6/noarch/napari-dv-0.2.6-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-dv/0.2.6/noarch/napari-dv-0.2.6-pyhd8ed1ab_0.tar.bz2,conda,0.2.6,conda-forge,['main'],public,,0.1.0,napari-dv.get_reader,Get Reader,napari_dv._reader:napari_get_reader,napari-dv.get_reader,"['*.dv', '*.mrc']",True,2.1,napari-dv,0.3.0,['UNKNOWN'],Deltavision/MRC file reader for napari,"# napari-dv +",text/markdown,https://github.com/royerlab/napari-dexp,Jordao Bragantini,jordao.bragantini@czbiohub.org,BSD-3,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari', 'napari-plugin-engine (>=0.1.4)', 'dexp', 'numpy']",>=3.7,,,False,0.0.7,conda-forge/napari-dexp/0.0.7,,,,,conda,noarch/napari-dexp-0.0.7-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dexp', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7']",pyhd8ed1ab_0,1656091148771.0,None-any-None,noarch,2022-06-24 17:21:30.270000+00:00,2703bcc0fa3ef40b50e0de9cd734e592,None,11072.0,conda-forge/napari-dexp/0.0.7/noarch/napari-dexp-0.0.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-dexp/0.0.7/noarch/napari-dexp-0.0.7-pyhd8ed1ab_0.tar.bz2,conda,0.0.7,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-dexp.write_image,Write Image,napari_dexp._writer:napari_write_image,napari-dexp.write_labels,Write Labels,napari_dexp._writer:napari_write_labels,,,,,,,,,,,,,,,,,,,napari-dexp.write_image,['image'],image,napari-dexp.write_labels,['labels'],['.zarr'],labels,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['.zarr'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +162,napari-dv,0.3.0,napari-dv,Deltavision/MRC file reader for napari,Talley Lambert,MIT,https://github.com/tlambert03/napari-dv,61fa687f414b5ba20eb11f28,['conda'],,https://github.com/tlambert03/napari-dv,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-dv,http://api.anaconda.org/packages/conda-forge/napari-dv,http://anaconda.org/conda-forge/napari-dv,"['0.2.6', '0.3.0']",0.2.6,0.3.0,['noarch'],4.0,,['pyhd8ed1ab_0'],0.2.6,conda-forge/napari-dv/0.2.6,1.0,0.0,2022-02-02 11:18:20.190000+00:00,2023-07-10 11:37:20.347000+00:00,conda,noarch/napari-dv-0.2.6-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['mrc >=0.1.5', 'napari-plugin-engine >=0.1.4', 'python >=3.7']",noarch,1643800667286.0,None-any-None,pyhd8ed1ab_0,2022-02-02 11:18:20.943000+00:00,b2822b4fb24a9688c23cf19b2001c98d,None,8267.0,conda-forge/napari-dv/0.2.6/noarch/napari-dv-0.2.6-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-dv/0.2.6/noarch/napari-dv-0.2.6-pyhd8ed1ab_0.tar.bz2,conda,0.2.6,conda-forge,['main'],public,,0.1.0,napari-dv.get_reader,Get Reader,napari_dv._reader:napari_get_reader,napari-dv.get_reader,"['*.dv', '*.mrc']",True,2.1,napari-dv,0.3.0,['UNKNOWN'],Deltavision/MRC file reader for napari,"# napari-dv [![License](https://img.shields.io/pypi/l/napari-dv.svg?color=green)](https://github.com/tlambert03/napari-dv/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-dv.svg?color=green)](https://pypi.org/project/napari-dv) @@ -16659,8 +17429,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ -",text/markdown,https://github.com/tlambert03/napari-dv,Talley Lambert,talley.lambert@gmail.com,MIT,"['Development Status :: 4 - Beta', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10']","['mrc (>=0.2.0)', 'napari-plugin-engine (>=0.1.4)', ""numpy ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.7,"['Bug Tracker, https://github.com/tlambert03/napari-dv/issues', 'Documentation, https://github.com/tlambert03/napari-dv#README.md', 'Source Code, https://github.com/tlambert03/napari-dv', 'User Support, https://github.com/tlambert03/napari-dv/issues']",['testing'],False,0.3.0,conda-forge/napari-dv/0.3.0,,,,,conda,noarch/napari-dv-0.3.0-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['mrc >=0.1.5', 'napari-plugin-engine >=0.1.4', 'python >=3.7']",pyhd8ed1ab_0,1688988992420.0,None-any-None,noarch,2023-07-10 11:37:18.382000+00:00,52f930ae9483ac7e04abc1964897bb56,13ac577b0b8e8d9f654285082eaf7a7b6cde609de84a9d28072206007986bb4f,569096.0,conda-forge/napari-dv/0.3.0/noarch/napari-dv-0.3.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-dv/0.3.0/noarch/napari-dv-0.3.0-pyhd8ed1ab_0.conda,conda,0.3.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-dv.write_image,Write Image,napari_dv._writer:napari_write_image,,,,,,,,,,,,,,,,,,,,,,napari-dv.write_image,['image'],image,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['.dv', '.mrc']",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -155,napari-dvid,0.2.0,napari-dvid,"DVID loader for napari, from a url",Emma Zhou,MIT,https://github.com/emmazhou/napari-dvid,6205050a4645634239ec0519,['conda'],,https://github.com/emmazhou/napari-dvid,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-dvid,http://api.anaconda.org/packages/conda-forge/napari-dvid,http://anaconda.org/conda-forge/napari-dvid,['0.2.0'],0.2.0,0.2.0,['noarch'],3.0,,['pyhd8ed1ab_0'],0.2.0,conda-forge/napari-dvid/0.2.0,1.0,0.0,2022-02-10 12:28:56.436000+00:00,2023-06-18 08:40:49.007000+00:00,conda,noarch/napari-dvid-0.2.0-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'requests']",noarch,1644496003564.0,None-any-None,pyhd8ed1ab_0,2022-02-10 12:28:56.681000+00:00,482e5279978a01f9f53af5d431919e27,None,9336.0,conda-forge/napari-dvid/0.2.0/noarch/napari-dvid-0.2.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-dvid/0.2.0/noarch/napari-dvid-0.2.0-pyhd8ed1ab_0.tar.bz2,conda,0.2.0,conda-forge,['main'],public,,0.2.1,napari-dvid.UrlWidget,UrlWidget,napari_dvid._dock_widget:UrlWidget,napari-dvid.napari_get_reader,['*'],True,2.1,napari-dvid,0.2.0,['UNKNOWN'],"DVID loader for napari, from a url","# napari-dvid +",text/markdown,https://github.com/tlambert03/napari-dv,Talley Lambert,talley.lambert@gmail.com,MIT,"['Development Status :: 4 - Beta', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10']","['mrc (>=0.2.0)', 'napari-plugin-engine (>=0.1.4)', ""numpy ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.7,"['Bug Tracker, https://github.com/tlambert03/napari-dv/issues', 'Documentation, https://github.com/tlambert03/napari-dv#README.md', 'Source Code, https://github.com/tlambert03/napari-dv', 'User Support, https://github.com/tlambert03/napari-dv/issues']",['testing'],False,0.3.0,conda-forge/napari-dv/0.3.0,,,,,conda,noarch/napari-dv-0.3.0-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['mrc >=0.1.5', 'napari-plugin-engine >=0.1.4', 'python >=3.7']",pyhd8ed1ab_0,1688988992420.0,None-any-None,noarch,2023-07-10 11:37:18.382000+00:00,52f930ae9483ac7e04abc1964897bb56,13ac577b0b8e8d9f654285082eaf7a7b6cde609de84a9d28072206007986bb4f,569096.0,conda-forge/napari-dv/0.3.0/noarch/napari-dv-0.3.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-dv/0.3.0/noarch/napari-dv-0.3.0-pyhd8ed1ab_0.conda,conda,0.3.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-dv.write_image,Write Image,napari_dv._writer:napari_write_image,,,,,,,,,,,,,,,,,,,,,,napari-dv.write_image,['image'],image,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['.dv', '.mrc']",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +163,napari-dvid,0.2.0,napari-dvid,"DVID loader for napari, from a url",Emma Zhou,MIT,https://github.com/emmazhou/napari-dvid,6205050a4645634239ec0519,['conda'],,https://github.com/emmazhou/napari-dvid,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-dvid,http://api.anaconda.org/packages/conda-forge/napari-dvid,http://anaconda.org/conda-forge/napari-dvid,['0.2.0'],0.2.0,0.2.0,['noarch'],3.0,,['pyhd8ed1ab_0'],0.2.0,conda-forge/napari-dvid/0.2.0,1.0,0.0,2022-02-10 12:28:56.436000+00:00,2023-06-18 08:40:49.007000+00:00,conda,noarch/napari-dvid-0.2.0-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'requests']",noarch,1644496003564.0,None-any-None,pyhd8ed1ab_0,2022-02-10 12:28:56.681000+00:00,482e5279978a01f9f53af5d431919e27,None,9336.0,conda-forge/napari-dvid/0.2.0/noarch/napari-dvid-0.2.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-dvid/0.2.0/noarch/napari-dvid-0.2.0-pyhd8ed1ab_0.tar.bz2,conda,0.2.0,conda-forge,['main'],public,,0.2.1,napari-dvid.UrlWidget,UrlWidget,napari_dvid._dock_widget:UrlWidget,napari-dvid.napari_get_reader,['*'],True,2.1,napari-dvid,0.2.0,['UNKNOWN'],"DVID loader for napari, from a url","# napari-dvid [![License](https://img.shields.io/pypi/l/napari-dvid.svg?color=green)](https://github.com/emmazhou/napari-dvid/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-dvid.svg?color=green)](https://pypi.org/project/napari-dvid) @@ -16729,8 +17499,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pypi]: https://pypi.org/ -",text/markdown,https://github.com/emmazhou/napari-dvid,Emma Zhou,emma@emmazhou.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'requests']",>=3.7,"['Bug Tracker, https://github.com/emmazhou/napari-dvid/issues', 'Documentation, https://github.com/emmazhou/napari-dvid#README.md', 'Source Code, https://github.com/emmazhou/napari-dvid', 'User Support, https://github.com/emmazhou/napari-dvid/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-dvid.UrlWidget,UrlWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -156,napari-dzi-zarr,0.1.2,napari-dzi-zarr,An experimental plugin for viewing Deep Zoom Images (DZI) with napari and zarr.,Trevor Manz,BSD-3,https://github.com/manzt/napari-dzi-zarr,61f68dfe39552dcb59de3907,['conda'],,https://github.com/manzt/napari-dzi-zarr,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-dzi-zarr,http://api.anaconda.org/packages/conda-forge/napari-dzi-zarr,http://anaconda.org/conda-forge/napari-dzi-zarr,['0.1.2'],0.1.2,0.1.2,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.2,conda-forge/napari-dzi-zarr/0.1.2,1.0,0.0,2022-01-30 13:09:15.883000+00:00,2023-06-18 08:40:39.557000+00:00,conda,noarch/napari-dzi-zarr-0.1.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['aiohttp >=3.6.2', 'dask-core >=2.23.0', 'fsspec >=0.8.0', 'imageio >=2.9.0', 'napari-plugin-engine >=0.1.4', 'numpy >=0.1.19', 'python >=3.6', 'requests >=2.24.0', 'zarr >=0.2.4']",noarch,1643548114815.0,None-any-None,pyhd8ed1ab_0,2022-01-30 13:09:16.441000+00:00,355334b182133acc13ca958bbe2b047c,None,11027.0,conda-forge/napari-dzi-zarr/0.1.2/noarch/napari-dzi-zarr-0.1.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-dzi-zarr/0.1.2/noarch/napari-dzi-zarr-0.1.2-pyhd8ed1ab_0.tar.bz2,conda,0.1.2,conda-forge,['main'],public,,0.2.1,napari-dzi-zarr.napari_get_reader,napari_get_reader,napari_dzi_zarr.dzi_zarr:napari_get_reader,napari-dzi-zarr.napari_get_reader,['*'],True,2.1,napari-dzi-zarr,0.1.2,['UNKNOWN'],An experimental plugin for viewing Deep Zoom Images (DZI) with napari and zarr.,"# napari-dzi-zarr +",text/markdown,https://github.com/emmazhou/napari-dvid,Emma Zhou,emma@emmazhou.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'requests']",>=3.7,"['Bug Tracker, https://github.com/emmazhou/napari-dvid/issues', 'Documentation, https://github.com/emmazhou/napari-dvid#README.md', 'Source Code, https://github.com/emmazhou/napari-dvid', 'User Support, https://github.com/emmazhou/napari-dvid/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-dvid.UrlWidget,UrlWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +164,napari-dzi-zarr,0.1.2,napari-dzi-zarr,An experimental plugin for viewing Deep Zoom Images (DZI) with napari and zarr.,Trevor Manz,BSD-3,https://github.com/manzt/napari-dzi-zarr,61f68dfe39552dcb59de3907,['conda'],,https://github.com/manzt/napari-dzi-zarr,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-dzi-zarr,http://api.anaconda.org/packages/conda-forge/napari-dzi-zarr,http://anaconda.org/conda-forge/napari-dzi-zarr,['0.1.2'],0.1.2,0.1.2,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.2,conda-forge/napari-dzi-zarr/0.1.2,1.0,0.0,2022-01-30 13:09:15.883000+00:00,2023-06-18 08:40:39.557000+00:00,conda,noarch/napari-dzi-zarr-0.1.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['aiohttp >=3.6.2', 'dask-core >=2.23.0', 'fsspec >=0.8.0', 'imageio >=2.9.0', 'napari-plugin-engine >=0.1.4', 'numpy >=0.1.19', 'python >=3.6', 'requests >=2.24.0', 'zarr >=0.2.4']",noarch,1643548114815.0,None-any-None,pyhd8ed1ab_0,2022-01-30 13:09:16.441000+00:00,355334b182133acc13ca958bbe2b047c,None,11027.0,conda-forge/napari-dzi-zarr/0.1.2/noarch/napari-dzi-zarr-0.1.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-dzi-zarr/0.1.2/noarch/napari-dzi-zarr-0.1.2-pyhd8ed1ab_0.tar.bz2,conda,0.1.2,conda-forge,['main'],public,,0.2.1,napari-dzi-zarr.napari_get_reader,napari_get_reader,napari_dzi_zarr.dzi_zarr:napari_get_reader,napari-dzi-zarr.napari_get_reader,['*'],True,2.1,napari-dzi-zarr,0.1.2,['UNKNOWN'],An experimental plugin for viewing Deep Zoom Images (DZI) with napari and zarr.,"# napari-dzi-zarr [![License](https://img.shields.io/pypi/l/napari-dzi-zarr.svg?color=green)](https://github.com/napari/napari-dzi-zarr/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-dzi-zarr.svg?color=green)](https://pypi.org/project/napari-dzi-zarr) @@ -16797,8 +17567,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/manzt/napari-dzi-zarr,Trevor Manz,trevor.j.manz@gmail.com,BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.6', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: Implementation :: CPython', 'Programming Language :: Python :: Implementation :: PyPy', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License', 'Framework :: napari']","['napari-plugin-engine (>=0.1.4)', 'numpy (>=0.1.19)', 'zarr (>=0.2.4)', 'dask[array] (>=2.23.0)', 'fsspec (>=0.8.0)', 'requests (>=2.24.0)', 'aiohttp (>=3.6.2)', 'imageio (>=2.9.0)']",>=3.6,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -157,napari-ehooke,0.0.9,eHooke,eHooke implementation within napari,António Brito,BSD-3-Clause,https://github.com/antmsbrito/napari-ehooke,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-ehooke.phase_example,Load phase contrast S.aureus sample data,napari_ehooke._sample_data:phase_example,,,,2.1,napari-ehooke,0.0.9,,eHooke implementation within napari,"# napari-ehooke +",text/markdown,https://github.com/manzt/napari-dzi-zarr,Trevor Manz,trevor.j.manz@gmail.com,BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.6', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: Implementation :: CPython', 'Programming Language :: Python :: Implementation :: PyPy', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License', 'Framework :: napari']","['napari-plugin-engine (>=0.1.4)', 'numpy (>=0.1.19)', 'zarr (>=0.2.4)', 'dask[array] (>=2.23.0)', 'fsspec (>=0.8.0)', 'requests (>=2.24.0)', 'aiohttp (>=3.6.2)', 'imageio (>=2.9.0)']",>=3.6,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +165,napari-ehooke,0.0.13,eHooke,eHooke implementation within napari,António Brito,BSD-3-Clause,https://github.com/antmsbrito/napari-ehooke,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-ehooke.phase_example,Load phase contrast S.aureus sample data,napari_ehooke._sample_data:phase_example,,,,2.1,napari-ehooke,0.0.13,,eHooke implementation within napari,"# napari-ehooke [![License BSD-3](https://img.shields.io/pypi/l/napari-ehooke.svg?color=green)](https://github.com/antmsbrito/napari-ehooke/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-ehooke.svg?color=green)](https://pypi.org/project/napari-ehooke) @@ -16865,8 +17635,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/antmsbrito/napari-ehooke,António Brito,antmsbrito95@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'napari[all]', 'tensorflow <=2.15.0', 'napari-skimage-regionprops', 'stardist-napari', 'scikit-learn', 'pandas', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/antmsbrito/napari-ehooke/issues', 'Documentation, https://github.com/antmsbrito/napari-ehooke#README.md', 'Source Code, https://github.com/antmsbrito/napari-ehooke', 'User Support, https://github.com/antmsbrito/napari-ehooke/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-ehooke.membrane_example,Load membrane dye S.aureus sample data,napari_ehooke._sample_data:membrane_example,napari-ehooke.dna_example,Load DNA dye S.aureus sample data,napari_ehooke._sample_data:dna_example,napari-ehooke.compute_mask,Compute base mask,napari_ehooke._computemask:compute_mask,napari-ehooke.compute_mask,Compute base mask,False,napari-ehooke.compute_features,Compute features,False,napari-ehooke.compute_cells,Compute cells,False,napari-ehooke.filter_cells,Filter cells,False,napari-ehooke.compute_features,Compute features,napari_ehooke._computefeatures:compute_features,,,,,,,,napari-ehooke.phase_example,unique_id.1,Phase contrast S. aureus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-ehooke.membrane_example,unique_id.2,Membrane dye S.aureus,napari-ehooke.compute_cells,Compute cells,napari_ehooke._computecells:compute_cells,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-ehooke.filter_cells,Filter cells,napari_ehooke._filtercells:filter_cells,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-ehooke.dna_example,unique_id.3,DNA dye S.aureus -158,napari-elementary-numpy-operations,0.0.5,napari-elementary-numpy-operations,"A napari plugin covers elementary numpy operations like swap axes, flip, sqeeze an array or rotate an arrays by 90° steps","Marc Boucsein, Robin Koch",BSD-3,https://github.com/MBPhys/napari-elementary-numpy-operations,62050a0f03b93eb2b11cd86a,['conda'],,https://github.com/MBPhys/napari-elementary-numpy-operations,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-elementary-numpy-operations,http://api.anaconda.org/packages/conda-forge/napari-elementary-numpy-operations,http://anaconda.org/conda-forge/napari-elementary-numpy-operations,['0.0.5'],0.0.5,0.0.5,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.5,conda-forge/napari-elementary-numpy-operations/0.0.5,1.0,0.0,2022-02-10 12:50:21.175000+00:00,2023-06-18 08:40:49.087000+00:00,conda,noarch/napari-elementary-numpy-operations-0.0.5-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'qtpy', 'superqt']",noarch,1644497243460.0,None-any-None,pyhd8ed1ab_0,2022-02-10 12:50:21.461000+00:00,58243db0cfb79c6b93016c04cba21b9e,None,10055.0,conda-forge/napari-elementary-numpy-operations/0.0.5/noarch/napari-elementary-numpy-operations-0.0.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-elementary-numpy-operations/0.0.5/noarch/napari-elementary-numpy-operations-0.0.5-pyhd8ed1ab_0.tar.bz2,conda,0.0.5,conda-forge,['main'],public,,0.2.1,napari-elementary-numpy-operations.elementary_numpy,elementary_numpy,napari_elementary_numpy_operations.napari_numpy:elementary_numpy,,,,2.1,napari-elementary-numpy-operations,0.0.5,['UNKNOWN'],"A napari plugin covers elementary numpy operations like swap axes, flip, sqeeze an array or rotate an arrays by 90° steps","# napari-elementary-numpy-operations +",text/markdown,https://github.com/antmsbrito/napari-ehooke,António Brito,antmsbrito95@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy<2.0', 'magicgui==0.6.1', 'napari[all]', 'tensorflow<=2.15.0', 'napari-skimage-regionprops', 'stardist-napari==2022.12.6', 'scikit-learn', 'scikit-image==0.20.0', 'pandas', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.8,"['Bug Tracker, https://github.com/antmsbrito/napari-ehooke/issues', 'Documentation, https://github.com/antmsbrito/napari-ehooke#README.md', 'Source Code, https://github.com/antmsbrito/napari-ehooke', 'User Support, https://github.com/antmsbrito/napari-ehooke/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-ehooke.membrane_example,Load membrane dye S.aureus sample data,napari_ehooke._sample_data:membrane_example,napari-ehooke.dna_example,Load DNA dye S.aureus sample data,napari_ehooke._sample_data:dna_example,napari-ehooke.compute_mask,Compute base mask,napari_ehooke._computemask:compute_mask,napari-ehooke.compute_mask,Compute base mask,False,napari-ehooke.compute_features,Compute features,False,napari-ehooke.compute_cells,Compute cells,False,napari-ehooke.filter_cells,Filter cells,False,napari-ehooke.compute_features,Compute features,napari_ehooke._computefeatures:compute_features,,,,,,,,napari-ehooke.phase_example,unique_id.1,Phase contrast S. aureus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-ehooke.membrane_example,unique_id.2,Membrane dye S.aureus,napari-ehooke.compute_cells,Compute cells,napari_ehooke._computecells:compute_cells,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-ehooke.filter_cells,Filter cells,napari_ehooke._filtercells:filter_cells,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-ehooke.dna_example,unique_id.3,DNA dye S.aureus +166,napari-elementary-numpy-operations,0.0.5,napari-elementary-numpy-operations,"A napari plugin covers elementary numpy operations like swap axes, flip, sqeeze an array or rotate an arrays by 90° steps","Marc Boucsein, Robin Koch",BSD-3,https://github.com/MBPhys/napari-elementary-numpy-operations,62050a0f03b93eb2b11cd86a,['conda'],,https://github.com/MBPhys/napari-elementary-numpy-operations,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-elementary-numpy-operations,http://api.anaconda.org/packages/conda-forge/napari-elementary-numpy-operations,http://anaconda.org/conda-forge/napari-elementary-numpy-operations,['0.0.5'],0.0.5,0.0.5,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.5,conda-forge/napari-elementary-numpy-operations/0.0.5,1.0,0.0,2022-02-10 12:50:21.175000+00:00,2023-06-18 08:40:49.087000+00:00,conda,noarch/napari-elementary-numpy-operations-0.0.5-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'qtpy', 'superqt']",noarch,1644497243460.0,None-any-None,pyhd8ed1ab_0,2022-02-10 12:50:21.461000+00:00,58243db0cfb79c6b93016c04cba21b9e,None,10055.0,conda-forge/napari-elementary-numpy-operations/0.0.5/noarch/napari-elementary-numpy-operations-0.0.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-elementary-numpy-operations/0.0.5/noarch/napari-elementary-numpy-operations-0.0.5-pyhd8ed1ab_0.tar.bz2,conda,0.0.5,conda-forge,['main'],public,,0.2.1,napari-elementary-numpy-operations.elementary_numpy,elementary_numpy,napari_elementary_numpy_operations.napari_numpy:elementary_numpy,,,,2.1,napari-elementary-numpy-operations,0.0.5,['UNKNOWN'],"A napari plugin covers elementary numpy operations like swap axes, flip, sqeeze an array or rotate an arrays by 90° steps","# napari-elementary-numpy-operations [![License](https://img.shields.io/pypi/l/napari-medical-image-formats.svg?color=green)](https://github.com/MBPhys/napari-elementary-numpy-operations/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-elementary-numpy-operations.svg?color=green)](https://pypi.org/project/napari-elementary-numpy-operations) @@ -16914,8 +17684,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/MBPhys/napari-elementary-numpy-operations,"Marc Boucsein, Robin Koch",,BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'qtpy', 'superqt']",>=3.7,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-elementary-numpy-operations.elementary_numpy,elementary_numpy,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -159,napari-em-reader,0.1.0,napari-em-reader,A napari plugin to read .em files,Lorenzo Gaifas,BSD-3,https://github.com/brisvag/napari-em-reader,61fa6744af92e1173d7235d0,['conda'],,https://github.com/brisvag/napari-em-reader,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-em-reader,http://api.anaconda.org/packages/conda-forge/napari-em-reader,http://anaconda.org/conda-forge/napari-em-reader,['0.1.0'],0.1.0,0.1.0,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.0,conda-forge/napari-em-reader/0.1.0,1.0,0.0,2022-02-02 11:13:05.633000+00:00,2023-06-18 08:40:40.992000+00:00,conda,noarch/napari-em-reader-0.1.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['emfile >=0.2', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.6']",noarch,1643800350811.0,None-any-None,pyhd8ed1ab_0,2022-02-02 11:13:06.547000+00:00,b8a504932d455a92a0d4a2389f22eef3,None,9514.0,conda-forge/napari-em-reader/0.1.0/noarch/napari-em-reader-0.1.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-em-reader/0.1.0/noarch/napari-em-reader-0.1.0-pyhd8ed1ab_0.tar.bz2,conda,0.1.0,conda-forge,['main'],public,,0.2.1,napari-em-reader.napari_get_reader,napari_get_reader,napari_em_reader._reader:napari_get_reader,napari-em-reader.napari_get_reader,['*'],True,2.1,napari-em-reader,0.1.0,['UNKNOWN'],A napari plugin to read .em files,"# napari-em-reader +",text/markdown,https://github.com/MBPhys/napari-elementary-numpy-operations,"Marc Boucsein, Robin Koch",,BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'qtpy', 'superqt']",>=3.7,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-elementary-numpy-operations.elementary_numpy,elementary_numpy,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +167,napari-em-reader,0.1.0,napari-em-reader,A napari plugin to read .em files,Lorenzo Gaifas,BSD-3,https://github.com/brisvag/napari-em-reader,61fa6744af92e1173d7235d0,['conda'],,https://github.com/brisvag/napari-em-reader,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-em-reader,http://api.anaconda.org/packages/conda-forge/napari-em-reader,http://anaconda.org/conda-forge/napari-em-reader,['0.1.0'],0.1.0,0.1.0,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.0,conda-forge/napari-em-reader/0.1.0,1.0,0.0,2022-02-02 11:13:05.633000+00:00,2023-06-18 08:40:40.992000+00:00,conda,noarch/napari-em-reader-0.1.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['emfile >=0.2', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.6']",noarch,1643800350811.0,None-any-None,pyhd8ed1ab_0,2022-02-02 11:13:06.547000+00:00,b8a504932d455a92a0d4a2389f22eef3,None,9514.0,conda-forge/napari-em-reader/0.1.0/noarch/napari-em-reader-0.1.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-em-reader/0.1.0/noarch/napari-em-reader-0.1.0-pyhd8ed1ab_0.tar.bz2,conda,0.1.0,conda-forge,['main'],public,,0.2.1,napari-em-reader.napari_get_reader,napari_get_reader,napari_em_reader._reader:napari_get_reader,napari-em-reader.napari_get_reader,['*'],True,2.1,napari-em-reader,0.1.0,['UNKNOWN'],A napari plugin to read .em files,"# napari-em-reader [![License](https://img.shields.io/pypi/l/napari-em-reader.svg?color=green)](https://github.com/brisvag/napari-em-reader/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-em-reader.svg?color=green)](https://pypi.org/project/napari-em-reader) @@ -16974,8 +17744,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/brisvag/napari-em-reader,Lorenzo Gaifas,brisvag@gmail.com,BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'emfile (>=0.2)']",>=3.6,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -160,napari-EMD,0.1.1,EMD File Viewer,A simple plugin to view .emd files in napari (Velox files),Nicolette Shaw,BSD-3-Clause,https://github.com/NickiShaw/napari-EMD.git,656e2a670eede9cee500fd44,['conda'],,https://pypi.org/project/napari-EMD/,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-emd,http://api.anaconda.org/packages/conda-forge/napari-emd,http://anaconda.org/conda-forge/napari-emd,"['0.0.1', '0.1.1']",0.1.1,0.1.1,['noarch'],5.0,https://github.com/NickiShaw/napari-EMD,['pyh9208f05_0'],0.0.1,conda-forge/napari-emd/0.0.1,1.0,0.0,2023-12-04 19:37:08.648000+00:00,2023-12-08 22:48:07.768000+00:00,conda,noarch/napari-emd-0.0.1-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['h5py', 'magicgui', 'numpy', 'python >=3.8', 'ujson']",noarch,1701718555448.0,None-any-None,pyh9208f05_0,2023-12-04 19:37:09.046000+00:00,4986c02d3509bccdcfe76889d5cf5090,e5a7d97efcb1b7cd57f81863ae82bed07d12bcb355bf715134eb801abb54bb59,15581.0,conda-forge/napari-emd/0.0.1/noarch/napari-emd-0.0.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-emd/0.0.1/noarch/napari-emd-0.0.1-pyh9208f05_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-EMD.get_reader,Open data with EMD File Viewer,napari_emd._reader:napari_get_reader,napari-EMD.get_reader,['*.emd'],False,2.1,napari-EMD,0.1.1,,A simple plugin to view .emd files in napari (Velox files),"# napari-EMD +",text/markdown,https://github.com/brisvag/napari-em-reader,Lorenzo Gaifas,brisvag@gmail.com,BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'emfile (>=0.2)']",>=3.6,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +168,napari-EMD,0.1.1,EMD File Viewer,A simple plugin to view .emd files in napari (Velox files),Nicolette Shaw,BSD-3-Clause,https://github.com/NickiShaw/napari-EMD.git,656e2a670eede9cee500fd44,['conda'],,https://pypi.org/project/napari-EMD/,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-emd,http://api.anaconda.org/packages/conda-forge/napari-emd,http://anaconda.org/conda-forge/napari-emd,"['0.0.1', '0.1.1']",0.1.1,0.1.1,['noarch'],5.0,https://github.com/NickiShaw/napari-EMD,['pyh9208f05_0'],0.0.1,conda-forge/napari-emd/0.0.1,1.0,0.0,2023-12-04 19:37:08.648000+00:00,2023-12-08 22:48:07.768000+00:00,conda,noarch/napari-emd-0.0.1-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['h5py', 'magicgui', 'numpy', 'python >=3.8', 'ujson']",noarch,1701718555448.0,None-any-None,pyh9208f05_0,2023-12-04 19:37:09.046000+00:00,4986c02d3509bccdcfe76889d5cf5090,e5a7d97efcb1b7cd57f81863ae82bed07d12bcb355bf715134eb801abb54bb59,15581.0,conda-forge/napari-emd/0.0.1/noarch/napari-emd-0.0.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-emd/0.0.1/noarch/napari-emd-0.0.1-pyh9208f05_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-EMD.get_reader,Open data with EMD File Viewer,napari_emd._reader:napari_get_reader,napari-EMD.get_reader,['*.emd'],False,2.1,napari-EMD,0.1.1,,A simple plugin to view .emd files in napari (Velox files),"# napari-EMD [![License BSD-3](https://img.shields.io/pypi/l/napari-EMD.svg?color=green)](https://github.com/NickiShaw/napari-EMD/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-EMD.svg?color=green)](https://pypi.org/project/napari-EMD) @@ -17053,8 +17823,8 @@ Images A and B show different frames in the same image stack, the metadata plugi [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/NickiShaw/napari-EMD.git,Nicolette Shaw,shaw.nicki@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'h5py', 'magicgui', 'ujson', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,,['testing'],False,0.1.1,conda-forge/napari-emd/0.1.1,,,,,conda,noarch/napari-emd-0.1.1-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['h5py', 'magicgui', 'numpy', 'python >=3.8', 'qtpy', 'ujson']",pyh9208f05_0,1702075624771.0,None-any-None,noarch,2023-12-08 22:48:06.051000+00:00,247a746677da513fdfa59818506b92e8,6a8e37d0a1aed0864de0fc7f99528da98b660c49dc9aa9acf35e96b4b947c7e9,15875.0,conda-forge/napari-emd/0.1.1/noarch/napari-emd-0.1.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-emd/0.1.1/noarch/napari-emd-0.1.1-pyh9208f05_0.conda,conda,0.1.1,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-EMD.load_widget,Display metadata for EMD file,napari_emd._widget:EMDWidget,,,,,,,napari-EMD.load_widget,EMD Reader Widget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -161,napari-error-reporter,0.3.1,Napari Error Reporter,Opt-in automated bug/error reporting for napari,Talley Lambert,BSD-3-Clause,https://github.com/tlambert03/napari-error-reporter,62a723cbaae6eba13a8cee31,['conda'],,https://github.com/tlambert03/napari-error-reporter,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-error-reporter,http://api.anaconda.org/packages/conda-forge/napari-error-reporter,http://anaconda.org/conda-forge/napari-error-reporter,"['0.3.0', '0.3.1']",0.3.1,0.3.1,['noarch'],4.0,,['pyhd8ed1ab_0'],0.3.0,conda-forge/napari-error-reporter/0.3.0,1.0,0.0,2022-06-13 11:47:20.647000+00:00,2023-06-18 08:41:46.411000+00:00,conda,noarch/napari-error-reporter-0.3.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['appdirs', 'python >=3.8', 'qtpy', 'sentry-sdk']",noarch,1655120807708.0,None-any-None,pyhd8ed1ab_0,2022-06-13 11:47:21.139000+00:00,0d18c2b377c9b11cb765d6d77945485d,None,16769.0,conda-forge/napari-error-reporter/0.3.0/noarch/napari-error-reporter-0.3.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-error-reporter/0.3.0/noarch/napari-error-reporter-0.3.0-pyhd8ed1ab_0.tar.bz2,conda,0.3.0,conda-forge,['main'],public,,0.2.1,,,,,,,2.1,napari-error-reporter,0.3.1,,Opt-in automated bug/error reporting for napari,"# 🐛 napari-error-reporter +",text/markdown,https://github.com/NickiShaw/napari-EMD.git,Nicolette Shaw,shaw.nicki@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'h5py', 'magicgui', 'ujson', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,,['testing'],False,0.1.1,conda-forge/napari-emd/0.1.1,,,,,conda,noarch/napari-emd-0.1.1-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['h5py', 'magicgui', 'numpy', 'python >=3.8', 'qtpy', 'ujson']",pyh9208f05_0,1702075624771.0,None-any-None,noarch,2023-12-08 22:48:06.051000+00:00,247a746677da513fdfa59818506b92e8,6a8e37d0a1aed0864de0fc7f99528da98b660c49dc9aa9acf35e96b4b947c7e9,15875.0,conda-forge/napari-emd/0.1.1/noarch/napari-emd-0.1.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-emd/0.1.1/noarch/napari-emd-0.1.1-pyh9208f05_0.conda,conda,0.1.1,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-EMD.load_widget,Display metadata for EMD file,napari_emd._widget:EMDWidget,,,,,,,napari-EMD.load_widget,EMD Reader Widget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +169,napari-error-reporter,0.3.1,Napari Error Reporter,Opt-in automated bug/error reporting for napari,Talley Lambert,BSD-3-Clause,https://github.com/tlambert03/napari-error-reporter,62a723cbaae6eba13a8cee31,['conda'],,https://github.com/tlambert03/napari-error-reporter,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-error-reporter,http://api.anaconda.org/packages/conda-forge/napari-error-reporter,http://anaconda.org/conda-forge/napari-error-reporter,"['0.3.0', '0.3.1']",0.3.1,0.3.1,['noarch'],4.0,,['pyhd8ed1ab_0'],0.3.0,conda-forge/napari-error-reporter/0.3.0,1.0,0.0,2022-06-13 11:47:20.647000+00:00,2023-06-18 08:41:46.411000+00:00,conda,noarch/napari-error-reporter-0.3.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['appdirs', 'python >=3.8', 'qtpy', 'sentry-sdk']",noarch,1655120807708.0,None-any-None,pyhd8ed1ab_0,2022-06-13 11:47:21.139000+00:00,0d18c2b377c9b11cb765d6d77945485d,None,16769.0,conda-forge/napari-error-reporter/0.3.0/noarch/napari-error-reporter-0.3.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-error-reporter/0.3.0/noarch/napari-error-reporter-0.3.0-pyhd8ed1ab_0.tar.bz2,conda,0.3.0,conda-forge,['main'],public,,0.2.1,,,,,,,2.1,napari-error-reporter,0.3.1,,Opt-in automated bug/error reporting for napari,"# 🐛 napari-error-reporter [![License](https://img.shields.io/pypi/l/napari-error-reporter.svg?color=green)](https://github.com/tlambert03/napari-error-reporter/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-error-reporter.svg?color=green)](https://pypi.org/project/napari-error-reporter) @@ -17541,8 +18311,8 @@ local variables and posted to https://github.com/napari/napari/issues Sentry retains event data for 90 days by default. For complete details, see Sentry's page on [Security & Compliance](https://sentry.io/security/) -",text/markdown,https://github.com/tlambert03/napari-error-reporter,Talley Lambert,talley.lambert@gmail.com,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Framework :: napari', 'License :: OSI Approved :: BSD License', 'Natural Language :: English', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10']","['appdirs', 'qtpy', 'sentry-sdk', ""black ; extra == 'dev'"", ""flake8 ; extra == 'dev'"", ""flake8-docstrings ; extra == 'dev'"", ""ipython ; extra == 'dev'"", ""isort ; extra == 'dev'"", ""jedi (<0.18.0) ; extra == 'dev'"", ""mypy ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""pydocstyle ; extra == 'dev'"", ""pytest ; extra == 'dev'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'"", ""tox-conda ; extra == 'testing'""]",>=3.8,"['Source Code, https://github.com/tlambert03/napari-error-reporter']","['dev', 'testing']",False,0.3.1,conda-forge/napari-error-reporter/0.3.1,,,,,conda,noarch/napari-error-reporter-0.3.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['appdirs', 'python >=3.8', 'qtpy', 'sentry-sdk']",pyhd8ed1ab_0,1655890753335.0,None-any-None,noarch,2022-06-22 09:39:39.050000+00:00,73ad0a0149401b4cb13bff1c734a87c0,None,17641.0,conda-forge/napari-error-reporter/0.3.1/noarch/napari-error-reporter-0.3.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-error-reporter/0.3.1/noarch/napari-error-reporter-0.3.1-pyhd8ed1ab_0.tar.bz2,conda,0.3.1,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -162,napari-exodeepfinder,0.0.3,Napari ExoDeepFinder,"A napari plugin for the ExpDeepFinder library which includes display, annotation, target generation, segmentation and clustering functionalities. An orthoslice view has been added for an easier visualisation and annotation process.","Constantin Aronssohn, Arthur Masson",GPL-3.0-only,https://github.com/deep-finder/napari-exodeepfinder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-exodeepfinder.get_reader,Open data with Napari ExoDeepFinder,napari_exodeepfinder._reader:napari_get_reader,napari-exodeepfinder.get_reader,"['*.mrc', '*.map', '*.rec', '*.h5', '*.tif', '*.TIF', '*.xml', '*.ods', '*.xls', '*.xlsx']",False,2.1,napari-exodeepfinder,0.0.3,,"A napari plugin for the ExpDeepFinder library which includes display, annotation, target generation, segmentation and clustering functionalities. An orthoslice view has been added for an easier visualisation and annotation process.","# napari-exodeepfinder +",text/markdown,https://github.com/tlambert03/napari-error-reporter,Talley Lambert,talley.lambert@gmail.com,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Framework :: napari', 'License :: OSI Approved :: BSD License', 'Natural Language :: English', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10']","['appdirs', 'qtpy', 'sentry-sdk', ""black ; extra == 'dev'"", ""flake8 ; extra == 'dev'"", ""flake8-docstrings ; extra == 'dev'"", ""ipython ; extra == 'dev'"", ""isort ; extra == 'dev'"", ""jedi (<0.18.0) ; extra == 'dev'"", ""mypy ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""pydocstyle ; extra == 'dev'"", ""pytest ; extra == 'dev'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'"", ""tox-conda ; extra == 'testing'""]",>=3.8,"['Source Code, https://github.com/tlambert03/napari-error-reporter']","['dev', 'testing']",False,0.3.1,conda-forge/napari-error-reporter/0.3.1,,,,,conda,noarch/napari-error-reporter-0.3.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['appdirs', 'python >=3.8', 'qtpy', 'sentry-sdk']",pyhd8ed1ab_0,1655890753335.0,None-any-None,noarch,2022-06-22 09:39:39.050000+00:00,73ad0a0149401b4cb13bff1c734a87c0,None,17641.0,conda-forge/napari-error-reporter/0.3.1/noarch/napari-error-reporter-0.3.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-error-reporter/0.3.1/noarch/napari-error-reporter-0.3.1-pyhd8ed1ab_0.tar.bz2,conda,0.3.1,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +170,napari-exodeepfinder,0.0.11,Napari ExoDeepFinder,"A napari plugin for the ExpDeepFinder library which includes display, annotation, target generation, segmentation and clustering functionalities. An orthoslice view has been added for an easier visualisation and annotation process.","Constantin Aronssohn, Arthur Masson",GPL-3.0-only,https://github.com/deep-finder/napari-exodeepfinder,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-exodeepfinder.get_reader,Open data with Napari ExoDeepFinder,napari_exodeepfinder._reader:napari_get_reader,napari-exodeepfinder.get_reader,"['*.mrc', '*.map', '*.rec', '*.h5', '*.tif', '*.TIF', '*.xml', '*.ods', '*.xls', '*.xlsx']",False,2.1,napari-exodeepfinder,0.0.11,,"A napari plugin for the ExpDeepFinder library which includes display, annotation, target generation, segmentation and clustering functionalities. An orthoslice view has been added for an easier visualisation and annotation process.","# napari-exodeepfinder [![License GNU GPL v3.0](https://img.shields.io/pypi/l/napari-exodeepfinder.svg?color=green)](https://github.com/deep-finder/napari-exodeepfinder/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-exodeepfinder.svg?color=green)](https://pypi.org/project/napari-exodeepfinder) @@ -17554,8 +18324,6 @@ see Sentry's page on [Security & Compliance](https://sentry.io/security/) A napari plugin for the ExoDeepFinder library which includes display, annotation, target generation, segmentation and clustering functionalities. An orthoslice view has been added for an easier visualisation and annotation process. -**The documentation for users is available [here](https://deep-finder.github.io/napari-exodeepfinder/).** - ---------------------------------- This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template. @@ -17605,8 +18373,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/deep-finder/napari-exodeepfinder,"Constantin Aronssohn, Arthur Masson",cnstt@tutanota.com,GPL-3.0-only,"['Development Status :: 3 - Alpha', 'Intended Audience :: Education', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering', 'Topic :: Scientific/Engineering :: Visualization', 'Topic :: Scientific/Engineering :: Information Analysis', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Topic :: Scientific/Engineering :: Artificial Intelligence', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']","['exodeepfinder >=0.2.5', 'numpy >=1.26.4', 'magicgui >=0.8.2', 'QtPy >=2.4.1', 'napari[all] >=0.4.19', 'scikit-image >=0.22.0', 'typing >=3.7.4.3', 'pandas >=2.2.2', 'lxml[html_clean] >=5.2.2', 'pillow >=10.3.0', 'h5py >=3.11.0', 'mrcfile >=1.5.0', 'scipy >=1.13.1', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'""]",>=3.9,"['Bug Tracker, https://github.com/deep-finder/napari-exodeepfinder/issues', 'Documentation, https://deep-finder.github.io/napari-exodeepfinder/', 'Source Code, https://github.com/deep-finder/napari-exodeepfinder', 'User Support, https://github.com/deep-finder/napari-exodeepfinder/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-exodeepfinder.make_denoise_widget,Make denoise widget,napari_exodeepfinder._widget:denoise_widget,napari-exodeepfinder.make_reorder_widget,Reorder layers automatically,napari_exodeepfinder._widget:reorder_widget,napari-exodeepfinder.make_add_points_widget,Add points to layers,napari_exodeepfinder._widget:AddPointsWidget,napari-exodeepfinder.make_reorder_widget,Reorder layers automatically,False,napari-exodeepfinder.make_denoise_widget,Denoise tomogram,False,napari-exodeepfinder.make_add_points_widget,Annotation,False,napari-exodeepfinder.make_orthoview,Orthoslice view,False,napari-exodeepfinder.write_annotations,Save annotation layers (points) to xml file,napari_exodeepfinder._writer:write_annotations_xml,napari-exodeepfinder.write_annotations,['points*'],,napari-exodeepfinder.write_labelmap,['labels'],['.mrc'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-exodeepfinder.write_labelmap,Save labelmap layer (labels) to mrc file,napari_exodeepfinder._writer:write_labelmap,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-exodeepfinder.write_tomogram,Save tomogram layer (image) to mrc file,napari_exodeepfinder._writer:write_tomogram,napari-exodeepfinder.make_orthoview,Orthoslice,napari_exodeepfinder._orthoview_widget:Orthoslice,napari-exodeepfinder.make_segmentation,Segmentation,napari_exodeepfinder._segmentation_widget:SegmentationWidget,napari-exodeepfinder.make_cluster,Clustering,napari_exodeepfinder._cluster_widget:ClusterWidget,,,,,,,['.xml'],napari-exodeepfinder.make_segmentation,Segmentation,False,napari-exodeepfinder.make_cluster,Clustering,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -163,napari-explorer,0.0.2,Explorer,"Browse files in a folder, filter, and open within napari",Tim Monko,BSD-3-Clause,https://github.com/TimMonko/napari-explorer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-explorer.folder_explorer,make Folder Explorer,napari_explorer._widget:folder_explorer,,,,2.1,napari-explorer,0.0.2,,"Browse files in a folder, filter, and open within napari","# napari-explorer +",text/markdown,https://github.com/deep-finder/napari-exodeepfinder,"Constantin Aronssohn, Arthur Masson",cnstt@tutanota.com,GPL-3.0-only,"['Development Status :: 3 - Alpha', 'Intended Audience :: Education', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering', 'Topic :: Scientific/Engineering :: Visualization', 'Topic :: Scientific/Engineering :: Information Analysis', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Topic :: Scientific/Engineering :: Artificial Intelligence', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']","['exodeepfinder>=0.3.11', 'typing>=3.7.4.3', 'pandas>=2.2.2', 'pillow>=10.3.0', 'napari[all]>=0.4.19; extra == ""all""', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari[all]>=0.4.19; extra == ""testing""']",>=3.9,"['Bug Tracker, https://github.com/deep-finder/napari-exodeepfinder/issues', 'Documentation, https://deep-finder.github.io/napari-exodeepfinder/', 'Source Code, https://github.com/deep-finder/napari-exodeepfinder', 'User Support, https://github.com/deep-finder/napari-exodeepfinder/issues']","['all', 'testing']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-exodeepfinder.make_denoise_widget,Make denoise widget,napari_exodeepfinder._widget:denoise_widget,napari-exodeepfinder.make_reorder_widget,Reorder layers automatically,napari_exodeepfinder._widget:reorder_widget,napari-exodeepfinder.make_add_points_widget,Add points to layers,napari_exodeepfinder._widget:AddPointsWidget,napari-exodeepfinder.make_reorder_widget,Reorder layers automatically,False,napari-exodeepfinder.make_denoise_widget,Denoise tomogram,False,napari-exodeepfinder.make_add_points_widget,Annotation,False,napari-exodeepfinder.make_orthoview,Orthoslice view,False,napari-exodeepfinder.write_annotations,Save annotation layers (points) to xml file,napari_exodeepfinder._writer:write_annotations_xml,napari-exodeepfinder.write_annotations,['points*'],,napari-exodeepfinder.write_labelmap,['labels'],['.mrc'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-exodeepfinder.write_labelmap,Save labelmap layer (labels) to mrc file,napari_exodeepfinder._writer:write_labelmap,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-exodeepfinder.write_tomogram,Save tomogram layer (image) to mrc file,napari_exodeepfinder._writer:write_tomogram,napari-exodeepfinder.make_orthoview,Orthoslice,napari_exodeepfinder._orthoview_widget:Orthoslice,napari-exodeepfinder.make_segmentation,Segmentation,napari_exodeepfinder._segmentation_widget:SegmentationWidget,napari-exodeepfinder.make_cluster,Clustering,napari_exodeepfinder._cluster_widget:ClusterWidget,,,,['.xml'],napari-exodeepfinder.make_segmentation,Segmentation,False,napari-exodeepfinder.make_cluster,Clustering,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +171,napari-explorer,0.0.2,Explorer,"Browse files in a folder, filter, and open within napari",Tim Monko,BSD-3-Clause,https://github.com/TimMonko/napari-explorer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-explorer.folder_explorer,make Folder Explorer,napari_explorer._widget:folder_explorer,,,,2.1,napari-explorer,0.0.2,,"Browse files in a folder, filter, and open within napari","# napari-explorer [![License BSD-3](https://img.shields.io/pypi/l/napari-explorer.svg?color=green)](https://github.com/TimMonko/napari-explorer/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-explorer.svg?color=green)](https://pypi.org/project/napari-explorer) @@ -17667,8 +18435,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/TimMonko/napari-explorer,Tim Monko,timmonko@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'napari', 'napari-aicsimageio', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-explorer.folder_explorer,Folder Explorer,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -164,napari-fast4dreg,0.0.1,Fast4DReg,"Dask empowered multidim, rigid registration for volumetric measurements",Marcel Issler,BSD-3-Clause,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-fast4dreg.get_reader,Open data with Fast4DReg,napari_fast4dreg._reader:napari_get_reader,napari-fast4dreg.get_reader,['*.npy'],False,2.1,napari-fast4dreg,0.0.1,,"Dask empowered multidim, rigid registration for volumetric measurements","# napari-fast4dreg +",text/markdown,https://github.com/TimMonko/napari-explorer,Tim Monko,timmonko@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'napari', 'napari-aicsimageio', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-explorer.folder_explorer,Folder Explorer,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +172,napari-fast4dreg,0.0.1,Fast4DReg,"Dask empowered multidim, rigid registration for volumetric measurements",Marcel Issler,BSD-3-Clause,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-fast4dreg.get_reader,Open data with Fast4DReg,napari_fast4dreg._reader:napari_get_reader,napari-fast4dreg.get_reader,['*.npy'],False,2.1,napari-fast4dreg,0.0.1,,"Dask empowered multidim, rigid registration for volumetric measurements","# napari-fast4dreg [![License BSD-3](https://img.shields.io/pypi/l/napari-fast4dreg.svg?color=green)](https://github.com/Macl-I/napari-fast4dreg/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-fast4dreg.svg?color=green)](https://pypi.org/project/napari-fast4dreg) @@ -17759,8 +18527,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,,Marcel Issler,"marcel.issler@kuleuven.be, marcel.issler@vib.be",BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', 'matplotlib', 'zarr', 'tqdm', 'scipy', 'pandas', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",napari-fast4dreg.write_multiple,Save multi-layer data with Fast4DReg,napari_fast4dreg._writer:write_multiple,napari-fast4dreg.write_single_image,Save image data with Fast4DReg,napari_fast4dreg._writer:write_single_image,napari-fast4dreg.make_sample_data,Load sample data from Fast4DReg,napari_fast4dreg._sample_data:make_sample_data,napari-fast4dreg.make_function_widget,fast4dreg,True,,,,,,,,,,napari-fast4dreg.make_function_widget,Make threshold function widget,napari_fast4dreg:Fast4DReg_widget,napari-fast4dreg.write_multiple,"['image*', 'labels*']",,napari-fast4dreg.write_single_image,['image'],['.npy'],,napari-fast4dreg.make_sample_data,unique_id.1,Fast4DReg,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -165,napari-feature-classifier,0.2.1,napari feature classifier,An interactive classifier plugin to use with label images and feature measurements,Joel Luethi and Max Hess,BSD-3-Clause,https://github.com/fractal-napari-plugins-collection/napari-feature-classifier,62ab6240aae6eba13ab133fa,['conda'],,https://github.com/fractal-napari-plugins-collection/napari-feature-classifier,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-feature-classifier,http://api.anaconda.org/packages/conda-forge/napari-feature-classifier,http://anaconda.org/conda-forge/napari-feature-classifier,"['0.0.1', '0.0.2', '0.0.3', '0.1.0', '0.1.1', '0.1.2', '0.2.0', '0.2.1']",0.2.1,0.2.1,['noarch'],23.0,,"['pyh9208f05_0', 'pyhd8ed1ab_0']",0.0.1,conda-forge/napari-feature-classifier/0.0.1,1.0,0.0,2022-06-16 17:02:54.898000+00:00,2024-09-17 07:07:21.635000+00:00,conda,noarch/napari-feature-classifier-0.0.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'pandas', 'python >=3.7', 'scikit-learn']",noarch,1655398805616.0,None-any-None,pyhd8ed1ab_0,2022-06-16 17:02:55.209000+00:00,b3bab5b12ee9a725bf960acba9660057,None,20911.0,conda-forge/napari-feature-classifier/0.0.1/noarch/napari-feature-classifier-0.0.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-feature-classifier/0.0.1/noarch/napari-feature-classifier-0.0.1-pyhd8ed1ab_0.tar.bz2,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-feature-classifier.annotator_init_widget,Annotator,napari_feature_classifier.annotator_init_widget:InitializeLabelAnnotatorWidget,,,,2.1,napari-feature-classifier,0.2.1,,An interactive classifier plugin to use with label images and feature measurements,"# napari-feature-classifier +",text/markdown,,Marcel Issler,"marcel.issler@kuleuven.be, marcel.issler@vib.be",BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', 'matplotlib', 'zarr', 'tqdm', 'scipy', 'pandas', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",napari-fast4dreg.write_multiple,Save multi-layer data with Fast4DReg,napari_fast4dreg._writer:write_multiple,napari-fast4dreg.write_single_image,Save image data with Fast4DReg,napari_fast4dreg._writer:write_single_image,napari-fast4dreg.make_sample_data,Load sample data from Fast4DReg,napari_fast4dreg._sample_data:make_sample_data,napari-fast4dreg.make_function_widget,fast4dreg,True,,,,,,,,,,napari-fast4dreg.make_function_widget,Make threshold function widget,napari_fast4dreg:Fast4DReg_widget,napari-fast4dreg.write_multiple,"['image*', 'labels*']",,napari-fast4dreg.write_single_image,['image'],['.npy'],,napari-fast4dreg.make_sample_data,unique_id.1,Fast4DReg,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +173,napari-feature-classifier,0.2.1,napari feature classifier,An interactive classifier plugin to use with label images and feature measurements,Joel Luethi and Max Hess,BSD-3-Clause,https://github.com/fractal-napari-plugins-collection/napari-feature-classifier,62ab6240aae6eba13ab133fa,['conda'],,https://github.com/fractal-napari-plugins-collection/napari-feature-classifier,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-feature-classifier,http://api.anaconda.org/packages/conda-forge/napari-feature-classifier,http://anaconda.org/conda-forge/napari-feature-classifier,"['0.0.1', '0.0.2', '0.0.3', '0.1.0', '0.1.1', '0.1.2', '0.2.0', '0.2.1']",0.2.1,0.2.1,['noarch'],23.0,,"['pyh9208f05_0', 'pyhd8ed1ab_0']",0.0.1,conda-forge/napari-feature-classifier/0.0.1,1.0,0.0,2022-06-16 17:02:54.898000+00:00,2024-09-17 07:07:21.635000+00:00,conda,noarch/napari-feature-classifier-0.0.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'pandas', 'python >=3.7', 'scikit-learn']",noarch,1655398805616.0,None-any-None,pyhd8ed1ab_0,2022-06-16 17:02:55.209000+00:00,b3bab5b12ee9a725bf960acba9660057,None,20911.0,conda-forge/napari-feature-classifier/0.0.1/noarch/napari-feature-classifier-0.0.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-feature-classifier/0.0.1/noarch/napari-feature-classifier-0.0.1-pyhd8ed1ab_0.tar.bz2,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-feature-classifier.annotator_init_widget,Annotator,napari_feature_classifier.annotator_init_widget:InitializeLabelAnnotatorWidget,,,,2.1,napari-feature-classifier,0.2.1,,An interactive classifier plugin to use with label images and feature measurements,"# napari-feature-classifier [![License](https://img.shields.io/pypi/l/napari-feature-classifier.svg?color=green)](https://github.com/fractal-napari-plugins-collection/napari-feature-classifier/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-feature-classifier.svg?color=green)](https://pypi.org/project/napari-feature-classifier) @@ -17907,8 +18675,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/fractal-napari-plugins-collection/napari-feature-classifier,Joel Luethi and Max Hess,joel.luethi@uzh.ch,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['numpy<2.0', 'napari', 'matplotlib', 'magicgui', 'pandas', 'scikit-learn>=1.2.2', 'pandera<0.20.0', 'xxhash', 'hypothesis']",>=3.9,"['Bug Tracker, https://github.com/fractal-napari-plugins-collection/napari-feature-classifier/issues', 'Documentation, https://github.com/fractal-napari-plugins-collection/napari-feature-classifier#napari-feature-classifier', 'Source Code, https://github.com/fractal-napari-plugins-collection/napari-feature-classifier', 'User Support, https://github.com/fractal-napari-plugins-collection/napari-feature-classifier/issues']",,False,0.0.2,conda-forge/napari-feature-classifier/0.0.2,0.0.3,conda-forge/napari-feature-classifier/0.0.3,0.1.0,conda-forge/napari-feature-classifier/0.1.0,conda,noarch/napari-feature-classifier-0.0.2-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'pandas', 'python >=3.7', 'qtpy', 'scikit-learn']",pyhd8ed1ab_0,1676682631873.0,None-any-None,noarch,2023-02-18 01:12:23.493000+00:00,6d8787b2122fd9e616bf339dcae90541,fb864c4d4e242e60623b0f4303e05fb25e0ffb231cc4f05f2ca29882d3fcbc1d,26397.0,conda-forge/napari-feature-classifier/0.0.2/noarch/napari-feature-classifier-0.0.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-feature-classifier/0.0.2/noarch/napari-feature-classifier-0.0.2-pyhd8ed1ab_0.conda,conda,0.0.2,conda-forge,['main'],conda,noarch/napari-feature-classifier-0.0.3-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'pandas', 'python >=3.7', 'qtpy', 'scikit-learn']",noarch,1678203187837.0,None-any-None,pyhd8ed1ab_0,2023-03-07 15:34:52.574000+00:00,e0803d0adc10e2d81c91d54e4fa51547,f2ff1c10e3dbeeb3e3d70a325da1ae1675f6de91655f386e867fe2c83a487360,26639.0,conda-forge/napari-feature-classifier/0.0.3/noarch/napari-feature-classifier-0.0.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-feature-classifier/0.0.3/noarch/napari-feature-classifier-0.0.3-pyhd8ed1ab_0.conda,conda,0.0.3,conda-forge,['main'],conda,noarch/napari-feature-classifier-0.1.0-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['imageio', 'magicgui', 'matplotlib-base', 'napari', 'numpy', 'pandas', 'pandera', 'python >=3.7', 'python-xxhash', 'qtpy', 'scikit-learn', 'typing_extensions']",BSD-3-Clause,python,1690320628070.0,2023-07-25 21:33:11.620000+00:00,1db857e552a736d45c858385f28d575c,a9bcb4d59ffbb03be90b7baacaa916068a0704d0ac090959684aeb5fc0a4212f,28986.0,conda-forge/napari-feature-classifier/0.1.0/noarch/napari-feature-classifier-0.1.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-feature-classifier/0.1.0/noarch/napari-feature-classifier-0.1.0-pyhd8ed1ab_0.conda,conda,0.1.0,conda-forge,['main'],,napari-feature-classifier.initialize_classifier_new,Initialize a Classifier,napari_feature_classifier.classifier_widget:ClassifierWidget,napari-feature-classifier.load_classifier,Load a Classifier,napari_feature_classifier.classifier_widget:LoadClassifierContainer,napari-feature-classifier.load_csv_features,CSV Feature loader,napari_feature_classifier.feature_loader_widget:load_features_factory,napari-feature-classifier.annotator_init_widget,Annotator,False,napari-feature-classifier.initialize_classifier_new,Initialize a Classifier,False,napari-feature-classifier.load_classifier,Load Classifier,False,napari-feature-classifier.load_csv_features,CSV Feature loader,False,,,,,,,,,,,,,,0.1.1,conda-forge/napari-feature-classifier/0.1.1,0.1.2,conda-forge/napari-feature-classifier/0.1.2,0.2.0,conda-forge/napari-feature-classifier/0.2.0,conda,noarch/napari-feature-classifier-0.1.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['imageio', 'magicgui', 'matplotlib-base', 'napari', 'numpy', 'pandas', 'pandera', 'python >=3.7', 'python-xxhash', 'qtpy', 'scikit-learn', 'typing_extensions']",noarch,1690321447720.0,None-any-None,pyhd8ed1ab_0,2023-07-25 21:46:43.417000+00:00,239a2381eff1026947c356bb97c03ef9,326a8e7aabbde37f7285aafefd14980c60a911fdead7615262d758c0bb3ee13c,29245.0,conda-forge/napari-feature-classifier/0.1.1/noarch/napari-feature-classifier-0.1.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-feature-classifier/0.1.1/noarch/napari-feature-classifier-0.1.1-pyhd8ed1ab_0.conda,conda,0.1.1,conda-forge,['main'],conda,noarch/napari-feature-classifier-0.1.2-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['imageio', 'magicgui', 'matplotlib-base', 'napari <0.4.19', 'numpy <2.0', 'pandas', 'pandera <0.20.0', 'python >=3.7', 'python-xxhash', 'qtpy', 'scikit-learn >=1.2.2', 'typing_extensions']",noarch,1721717945839.0,None-any-None,pyh9208f05_0,2024-07-23 07:01:24.577000+00:00,696d1abc472dd59af57a76cb53781143,f4de306ff348223bae121babc0d70cf8d70de779b0b876858efeee6c172906a2,30580.0,conda-forge/napari-feature-classifier/0.1.2/noarch/napari-feature-classifier-0.1.2-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-feature-classifier/0.1.2/noarch/napari-feature-classifier-0.1.2-pyh9208f05_0.conda,conda,0.1.2,conda-forge,['main'],conda,noarch/napari-feature-classifier-0.2.0-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['imageio', 'magicgui', 'matplotlib-base', 'napari', 'numpy <2.0', 'pandas', 'pandera <0.20.0', 'python >=3.7', 'python-xxhash', 'qtpy', 'scikit-learn >=1.2.2', 'typing_extensions']",BSD-3-Clause,python,1722075737514.0,2024-07-27 10:24:18.964000+00:00,174ff3d2e50c5ee8db3cc0779ff157c2,d1a6f5da57e943bfbcf89fb31124ea3097ba0118a5779d4a6c8398d98cbedbfa,30743.0,conda-forge/napari-feature-classifier/0.2.0/noarch/napari-feature-classifier-0.2.0-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-feature-classifier/0.2.0/noarch/napari-feature-classifier-0.2.0-pyh9208f05_0.conda,conda,0.2.0,conda-forge,['main'],,,,,,,0.2.1,conda-forge/napari-feature-classifier/0.2.1,,,conda,noarch/napari-feature-classifier-0.2.1-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['imageio', 'magicgui', 'matplotlib-base', 'napari', 'numpy <2.0', 'pandas', 'pandera <0.20.0', 'python >=3.7', 'python-xxhash', 'qtpy', 'scikit-learn >=1.2.2', 'typing_extensions']",noarch,1726556736834.0,None-any-None,pyh9208f05_0,2024-09-17 07:07:19.785000+00:00,2ae8ce528727148590ee229a8835443a,014d239287f737f745f1a27d6e03f2296258496f5b4fb9f78e542106de4281c1,31402.0,conda-forge/napari-feature-classifier/0.2.1/noarch/napari-feature-classifier-0.2.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-feature-classifier/0.2.1/noarch/napari-feature-classifier-0.2.1-pyh9208f05_0.conda,conda,0.2.1,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -166,napari-feature-visualization,0.0.1,Napari Feature Visualization,Visualizing feature measurements on label images in napari,"Joel Luethi, Adrian Tschan"," +",text/markdown,https://github.com/fractal-napari-plugins-collection/napari-feature-classifier,Joel Luethi and Max Hess,joel.luethi@uzh.ch,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['numpy<2.0', 'napari', 'matplotlib', 'magicgui', 'pandas', 'scikit-learn>=1.2.2', 'pandera<0.20.0', 'xxhash', 'hypothesis']",>=3.9,"['Bug Tracker, https://github.com/fractal-napari-plugins-collection/napari-feature-classifier/issues', 'Documentation, https://github.com/fractal-napari-plugins-collection/napari-feature-classifier#napari-feature-classifier', 'Source Code, https://github.com/fractal-napari-plugins-collection/napari-feature-classifier', 'User Support, https://github.com/fractal-napari-plugins-collection/napari-feature-classifier/issues']",,False,0.0.2,conda-forge/napari-feature-classifier/0.0.2,0.0.3,conda-forge/napari-feature-classifier/0.0.3,0.1.0,conda-forge/napari-feature-classifier/0.1.0,conda,noarch/napari-feature-classifier-0.0.2-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'pandas', 'python >=3.7', 'qtpy', 'scikit-learn']",pyhd8ed1ab_0,1676682631873.0,None-any-None,noarch,2023-02-18 01:12:23.493000+00:00,6d8787b2122fd9e616bf339dcae90541,fb864c4d4e242e60623b0f4303e05fb25e0ffb231cc4f05f2ca29882d3fcbc1d,26397.0,conda-forge/napari-feature-classifier/0.0.2/noarch/napari-feature-classifier-0.0.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-feature-classifier/0.0.2/noarch/napari-feature-classifier-0.0.2-pyhd8ed1ab_0.conda,conda,0.0.2,conda-forge,['main'],conda,noarch/napari-feature-classifier-0.0.3-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'pandas', 'python >=3.7', 'qtpy', 'scikit-learn']",noarch,1678203187837.0,None-any-None,pyhd8ed1ab_0,2023-03-07 15:34:52.574000+00:00,e0803d0adc10e2d81c91d54e4fa51547,f2ff1c10e3dbeeb3e3d70a325da1ae1675f6de91655f386e867fe2c83a487360,26639.0,conda-forge/napari-feature-classifier/0.0.3/noarch/napari-feature-classifier-0.0.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-feature-classifier/0.0.3/noarch/napari-feature-classifier-0.0.3-pyhd8ed1ab_0.conda,conda,0.0.3,conda-forge,['main'],conda,noarch/napari-feature-classifier-0.1.0-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['imageio', 'magicgui', 'matplotlib-base', 'napari', 'numpy', 'pandas', 'pandera', 'python >=3.7', 'python-xxhash', 'qtpy', 'scikit-learn', 'typing_extensions']",BSD-3-Clause,python,1690320628070.0,2023-07-25 21:33:11.620000+00:00,1db857e552a736d45c858385f28d575c,a9bcb4d59ffbb03be90b7baacaa916068a0704d0ac090959684aeb5fc0a4212f,28986.0,conda-forge/napari-feature-classifier/0.1.0/noarch/napari-feature-classifier-0.1.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-feature-classifier/0.1.0/noarch/napari-feature-classifier-0.1.0-pyhd8ed1ab_0.conda,conda,0.1.0,conda-forge,['main'],,napari-feature-classifier.initialize_classifier_new,Initialize a Classifier,napari_feature_classifier.classifier_widget:ClassifierWidget,napari-feature-classifier.load_classifier,Load a Classifier,napari_feature_classifier.classifier_widget:LoadClassifierContainer,napari-feature-classifier.load_csv_features,CSV Feature loader,napari_feature_classifier.feature_loader_widget:load_features_factory,napari-feature-classifier.annotator_init_widget,Annotator,False,napari-feature-classifier.initialize_classifier_new,Initialize a Classifier,False,napari-feature-classifier.load_classifier,Load Classifier,False,napari-feature-classifier.load_csv_features,CSV Feature loader,False,,,,,,,,,,,,,,0.1.1,conda-forge/napari-feature-classifier/0.1.1,0.1.2,conda-forge/napari-feature-classifier/0.1.2,0.2.0,conda-forge/napari-feature-classifier/0.2.0,conda,noarch/napari-feature-classifier-0.1.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['imageio', 'magicgui', 'matplotlib-base', 'napari', 'numpy', 'pandas', 'pandera', 'python >=3.7', 'python-xxhash', 'qtpy', 'scikit-learn', 'typing_extensions']",noarch,1690321447720.0,None-any-None,pyhd8ed1ab_0,2023-07-25 21:46:43.417000+00:00,239a2381eff1026947c356bb97c03ef9,326a8e7aabbde37f7285aafefd14980c60a911fdead7615262d758c0bb3ee13c,29245.0,conda-forge/napari-feature-classifier/0.1.1/noarch/napari-feature-classifier-0.1.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-feature-classifier/0.1.1/noarch/napari-feature-classifier-0.1.1-pyhd8ed1ab_0.conda,conda,0.1.1,conda-forge,['main'],conda,noarch/napari-feature-classifier-0.1.2-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['imageio', 'magicgui', 'matplotlib-base', 'napari <0.4.19', 'numpy <2.0', 'pandas', 'pandera <0.20.0', 'python >=3.7', 'python-xxhash', 'qtpy', 'scikit-learn >=1.2.2', 'typing_extensions']",noarch,1721717945839.0,None-any-None,pyh9208f05_0,2024-07-23 07:01:24.577000+00:00,696d1abc472dd59af57a76cb53781143,f4de306ff348223bae121babc0d70cf8d70de779b0b876858efeee6c172906a2,30580.0,conda-forge/napari-feature-classifier/0.1.2/noarch/napari-feature-classifier-0.1.2-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-feature-classifier/0.1.2/noarch/napari-feature-classifier-0.1.2-pyh9208f05_0.conda,conda,0.1.2,conda-forge,['main'],conda,noarch/napari-feature-classifier-0.2.0-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['imageio', 'magicgui', 'matplotlib-base', 'napari', 'numpy <2.0', 'pandas', 'pandera <0.20.0', 'python >=3.7', 'python-xxhash', 'qtpy', 'scikit-learn >=1.2.2', 'typing_extensions']",BSD-3-Clause,python,1722075737514.0,2024-07-27 10:24:18.964000+00:00,174ff3d2e50c5ee8db3cc0779ff157c2,d1a6f5da57e943bfbcf89fb31124ea3097ba0118a5779d4a6c8398d98cbedbfa,30743.0,conda-forge/napari-feature-classifier/0.2.0/noarch/napari-feature-classifier-0.2.0-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-feature-classifier/0.2.0/noarch/napari-feature-classifier-0.2.0-pyh9208f05_0.conda,conda,0.2.0,conda-forge,['main'],,,,,,,0.2.1,conda-forge/napari-feature-classifier/0.2.1,,,conda,noarch/napari-feature-classifier-0.2.1-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['imageio', 'magicgui', 'matplotlib-base', 'napari', 'numpy <2.0', 'pandas', 'pandera <0.20.0', 'python >=3.7', 'python-xxhash', 'qtpy', 'scikit-learn >=1.2.2', 'typing_extensions']",noarch,1726556736834.0,None-any-None,pyh9208f05_0,2024-09-17 07:07:19.785000+00:00,2ae8ce528727148590ee229a8835443a,014d239287f737f745f1a27d6e03f2296258496f5b4fb9f78e542106de4281c1,31402.0,conda-forge/napari-feature-classifier/0.2.1/noarch/napari-feature-classifier-0.2.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-feature-classifier/0.2.1/noarch/napari-feature-classifier-0.2.1-pyh9208f05_0.conda,conda,0.2.1,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +174,napari-feature-visualization,0.0.1,Napari Feature Visualization,Visualizing feature measurements on label images in napari,"Joel Luethi, Adrian Tschan"," Copyright (c) 2024, Joel Luethi, Adrian Tschan All rights reserved. @@ -18035,8 +18803,8 @@ SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. -","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy <2.0', 'magicgui', 'qtpy', 'scikit-image', 'matplotlib', 'pandas', 'packaging', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.9,"['Bug Tracker, https://github.com/fractal-napari-plugins-collection/napari-feature-visualization/issues', 'Documentation, https://github.com/fractal-napari-plugins-collection/napari-feature-visualization#README.md', 'Source Code, https://github.com/fractal-napari-plugins-collection/napari-feature-visualization', 'User Support, https://github.com/fractal-napari-plugins-collection/napari-feature-visualization/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['Annotation'],napari-feature-visualization.feature_vis,Visualize features on label layer,napari_feature_visualization.feature_vis:feature_vis,,,,,,,napari-feature-visualization.feature_vis,Feature Visualization,False,,,,,,,,,,,,,,,,,,,,napari-feature-visualization.make_sample_data,unique_id.1,Napari Feature Visualization,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -167,napari-features,0.1.4,napari-features,extracts image and object features,Allen Goodman,MIT,https://github.com/0x00b1/napari-features,62062a92af92e1173d25ff46,['conda'],,https://github.com/0x00b1/napari-features,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-features,http://api.anaconda.org/packages/conda-forge/napari-features,http://anaconda.org/conda-forge/napari-features,['0.1.4'],0.1.4,0.1.4,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.4,conda-forge/napari-features/0.1.4,1.0,0.0,2022-02-11 09:21:19.268000+00:00,2023-06-18 08:40:49.611000+00:00,conda,noarch/napari-features-0.1.4-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['magicgui >=0.2.9', 'napari >=0.4.10', 'napari-plugin-engine >=0.1.4', 'numpy >=1.19.5', 'pandas >=1.2.4', 'python >=3.7', 'qtpy >=1.9.0', 'scikit-image >=0.18.1', 'scipy >=1.4.1']",noarch,1644571137462.0,None-any-None,pyhd8ed1ab_0,2022-02-11 09:21:20.526000+00:00,35aa7b11a89fd6b4664fcf71f6e2a9ff,None,94840.0,conda-forge/napari-features/0.1.4/noarch/napari-features-0.1.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-features/0.1.4/noarch/napari-features-0.1.4-pyhd8ed1ab_0.tar.bz2,conda,0.1.4,conda-forge,['main'],public,,0.2.1,,,,,,,2.1,napari-features,0.1.4,['UNKNOWN'],extracts image and object features,"# napari-features +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy <2.0', 'magicgui', 'qtpy', 'scikit-image', 'matplotlib', 'pandas', 'packaging', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.9,"['Bug Tracker, https://github.com/fractal-napari-plugins-collection/napari-feature-visualization/issues', 'Documentation, https://github.com/fractal-napari-plugins-collection/napari-feature-visualization#README.md', 'Source Code, https://github.com/fractal-napari-plugins-collection/napari-feature-visualization', 'User Support, https://github.com/fractal-napari-plugins-collection/napari-feature-visualization/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['Annotation'],napari-feature-visualization.feature_vis,Visualize features on label layer,napari_feature_visualization.feature_vis:feature_vis,,,,,,,napari-feature-visualization.feature_vis,Feature Visualization,False,,,,,,,,,,,,,,,,,,,,napari-feature-visualization.make_sample_data,unique_id.1,Napari Feature Visualization,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +175,napari-features,0.1.4,napari-features,extracts image and object features,Allen Goodman,MIT,https://github.com/0x00b1/napari-features,62062a92af92e1173d25ff46,['conda'],,https://github.com/0x00b1/napari-features,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-features,http://api.anaconda.org/packages/conda-forge/napari-features,http://anaconda.org/conda-forge/napari-features,['0.1.4'],0.1.4,0.1.4,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.4,conda-forge/napari-features/0.1.4,1.0,0.0,2022-02-11 09:21:19.268000+00:00,2023-06-18 08:40:49.611000+00:00,conda,noarch/napari-features-0.1.4-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['magicgui >=0.2.9', 'napari >=0.4.10', 'napari-plugin-engine >=0.1.4', 'numpy >=1.19.5', 'pandas >=1.2.4', 'python >=3.7', 'qtpy >=1.9.0', 'scikit-image >=0.18.1', 'scipy >=1.4.1']",noarch,1644571137462.0,None-any-None,pyhd8ed1ab_0,2022-02-11 09:21:20.526000+00:00,35aa7b11a89fd6b4664fcf71f6e2a9ff,None,94840.0,conda-forge/napari-features/0.1.4/noarch/napari-features-0.1.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-features/0.1.4/noarch/napari-features-0.1.4-pyhd8ed1ab_0.tar.bz2,conda,0.1.4,conda-forge,['main'],public,,0.2.1,,,,,,,2.1,napari-features,0.1.4,['UNKNOWN'],extracts image and object features,"# napari-features [![License](https://img.shields.io/pypi/l/napari-features.svg?color=green)](https://github.com/0x00b1/napari-features/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-features.svg?color=green)](https://pypi.org/project/napari-features) @@ -18244,8 +19012,8 @@ An extensible, general-purpose feature extraction plug-in for the [Napari](https texture_object_haralick_maximum_correlation_coefficient -",text/markdown,https://github.com/0x00b1/napari-features,Allen Goodman,allen.goodman@icloud.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['magicgui (>=0.2.9)', 'napari (>=0.4.10)', 'napari-plugin-engine (>=0.1.4)', 'numpy (>=1.19.5)', 'pandas (>=1.2.4)', 'qtpy (>=1.9.0)', 'scikit-image (>=0.18.1)', 'scipy (>=1.4.1)']",>=3.7,"['Bug Tracker, https://github.com/0x00b1/napari-features/issues', 'Documentation, https://github.com/0x00b1/napari-features#README.md', 'Source Code, https://github.com/0x00b1/napari-features', 'User Support, https://github.com/0x00b1/napari-features/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -168,napari-features-selector,0.0.4,Features Selection GA,A lightweight widget for features selection.,Sanjeev Kumar,BSD-3-Clause,https://github.com/kumar-sanjeeev/napari-features-selector,6436f4442e917f0f9be7a8a0,['conda'],,https://github.com/kumar-sanjeeev/napari-features-selector,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-features-selector,http://api.anaconda.org/packages/conda-forge/napari-features-selector,http://anaconda.org/conda-forge/napari-features-selector,['0.0.4'],0.0.4,0.0.4,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.4,conda-forge/napari-features-selector/0.0.4,1.0,0.0,2023-04-12 18:11:11.993000+00:00,2023-06-18 17:28:00.177000+00:00,conda,noarch/napari-features-selector-0.0.4-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-learn', 'sklearn-genetic-opt']",noarch,1681322869570.0,None-any-None,pyhd8ed1ab_0,2023-04-12 18:11:12.470000+00:00,f8432bf3baf42d7b52e48363b48b579d,4e22ebd334f79c4701d42f90af13ca3edb0e544b81f73d4b2dd796dcd6185b1c,16404.0,conda-forge/napari-features-selector/0.0.4/noarch/napari-features-selector-0.0.4-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-features-selector/0.0.4/noarch/napari-features-selector-0.0.4-pyhd8ed1ab_0.conda,conda,0.0.4,conda-forge,['main'],public,,0.2.1,napari-features-selector.gui_GA,Genetic Algorithm,napari_features_selector._widget:initialize_widget,,,,2.1,napari-features-selector,0.0.4,,A lightweight widget for features selection.,"# napari-features-selector +",text/markdown,https://github.com/0x00b1/napari-features,Allen Goodman,allen.goodman@icloud.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['magicgui (>=0.2.9)', 'napari (>=0.4.10)', 'napari-plugin-engine (>=0.1.4)', 'numpy (>=1.19.5)', 'pandas (>=1.2.4)', 'qtpy (>=1.9.0)', 'scikit-image (>=0.18.1)', 'scipy (>=1.4.1)']",>=3.7,"['Bug Tracker, https://github.com/0x00b1/napari-features/issues', 'Documentation, https://github.com/0x00b1/napari-features#README.md', 'Source Code, https://github.com/0x00b1/napari-features', 'User Support, https://github.com/0x00b1/napari-features/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +176,napari-features-selector,0.0.4,Features Selection GA,A lightweight widget for features selection.,Sanjeev Kumar,BSD-3-Clause,https://github.com/kumar-sanjeeev/napari-features-selector,6436f4442e917f0f9be7a8a0,['conda'],,https://github.com/kumar-sanjeeev/napari-features-selector,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-features-selector,http://api.anaconda.org/packages/conda-forge/napari-features-selector,http://anaconda.org/conda-forge/napari-features-selector,['0.0.4'],0.0.4,0.0.4,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.4,conda-forge/napari-features-selector/0.0.4,1.0,0.0,2023-04-12 18:11:11.993000+00:00,2023-06-18 17:28:00.177000+00:00,conda,noarch/napari-features-selector-0.0.4-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-learn', 'sklearn-genetic-opt']",noarch,1681322869570.0,None-any-None,pyhd8ed1ab_0,2023-04-12 18:11:12.470000+00:00,f8432bf3baf42d7b52e48363b48b579d,4e22ebd334f79c4701d42f90af13ca3edb0e544b81f73d4b2dd796dcd6185b1c,16404.0,conda-forge/napari-features-selector/0.0.4/noarch/napari-features-selector-0.0.4-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-features-selector/0.0.4/noarch/napari-features-selector-0.0.4-pyhd8ed1ab_0.conda,conda,0.0.4,conda-forge,['main'],public,,0.2.1,napari-features-selector.gui_GA,Genetic Algorithm,napari_features_selector._widget:initialize_widget,,,,2.1,napari-features-selector,0.0.4,,A lightweight widget for features selection.,"# napari-features-selector [![License BSD-3](https://img.shields.io/pypi/l/napari-features-selector.svg?color=green)](https://github.com/kumar-sanjeeev/napari-features-selector/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-features-selector.svg?color=green)](https://pypi.org/project/napari-features-selector) @@ -18310,8 +19078,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/kumar-sanjeeev/napari-features-selector,Sanjeev Kumar,kumar.san96@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'pandas', 'scikit-learn', 'sklearn-genetic-opt', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/kumar-sanjeeev/napari-features-selector/issues', 'Documentation, https://github.com/kumar-sanjeeev/napari-features-selector#README.md', 'Source Code, https://github.com/kumar-sanjeeev/napari-features-selector', 'User Support, https://github.com/kumar-sanjeeev/napari-features-selector/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-features-selector.gui_GA,Feature Selection using - GA [Genetic Algorithm],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -169,napari-figure,0.1.1,Figure,Making Figure with napari more easily,romainGuiet,BSD-3-Clause,https://github.com/BIOP/napari-figure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-figure.make_qwidget,Figure,napari_figure.figure_widget:FigureWidget,,,,2.1,napari-figure,0.1.1,,Making Figure with napari more easily,"# napari-figure +",text/markdown,https://github.com/kumar-sanjeeev/napari-features-selector,Sanjeev Kumar,kumar.san96@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'pandas', 'scikit-learn', 'sklearn-genetic-opt', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/kumar-sanjeeev/napari-features-selector/issues', 'Documentation, https://github.com/kumar-sanjeeev/napari-features-selector#README.md', 'Source Code, https://github.com/kumar-sanjeeev/napari-features-selector', 'User Support, https://github.com/kumar-sanjeeev/napari-features-selector/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-features-selector.gui_GA,Feature Selection using - GA [Genetic Algorithm],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +177,napari-figure,0.1.1,Figure,Making Figure with napari more easily,romainGuiet,BSD-3-Clause,https://github.com/BIOP/napari-figure,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-figure.make_qwidget,Figure,napari_figure.figure_widget:FigureWidget,,,,2.1,napari-figure,0.1.1,,Making Figure with napari more easily,"# napari-figure [![License BSD-3](https://img.shields.io/pypi/l/napari-figure.svg?color=green)](https://github.com/romainGuiet/napari-figure/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-figure.svg?color=green)](https://pypi.org/project/napari-figure) @@ -18378,8 +19146,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/BIOP/napari-figure,romainGuiet,romain.guiet@epfl.ch,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'microfilm', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/BIOP/napari-figure/issues', 'Documentation, https://github.com/BIOP/napari-figure#README.md', 'Source Code, https://github.com/BIOP/napari-figure', 'User Support, https://github.com/BIOP/napari-figure/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-figure.make_qwidget,Figure maker,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -170,napari-filament-annotator,0.1.2,napari 3D filament annotator,Annotation of filaments / curvilinear structures in 3D,Anna Medyukhina,Apache-2.0,https://github.com/amedyukhina/napari-filament-annotator,63aed46b912363225b83f5a4,['conda'],,https://github.com/amedyukhina/napari-filament-annotator,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-filament-annotator,http://api.anaconda.org/packages/conda-forge/napari-filament-annotator,http://anaconda.org/conda-forge/napari-filament-annotator,['0.1.2'],0.1.2,0.1.2,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.2,conda-forge/napari-filament-annotator/0.1.2,1.0,0.0,2022-12-30 12:07:04.705000+00:00,2023-06-18 08:43:24.064000+00:00,conda,noarch/napari-filament-annotator-0.1.2-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['geometry3d', 'imageio !=2.22.1', 'magicgui', 'napari', 'networkx', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scikit-learn', 'scipy']",noarch,1672401897570.0,None-any-None,pyhd8ed1ab_0,2022-12-30 12:07:05.072000+00:00,7c26a8c655e373ca6442e0d232348ea5,73afbaff80336be45680c7bdfc9ce58b187772d2ee535b48ee6d0b2f5b779a22,25297.0,conda-forge/napari-filament-annotator/0.1.2/noarch/napari-filament-annotator-0.1.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-filament-annotator/0.1.2/noarch/napari-filament-annotator-0.1.2-pyhd8ed1ab_0.conda,conda,0.1.2,conda-forge,['main'],public,,0.2.1,napari-filament-annotator.load_sample_image,Load sample data for napari 3D filament annotator,napari_filament_annotator._sample_data:load_sample_image,,,,2.1,napari-filament-annotator,0.1.2,,Annotation of filaments / curvilinear structures in 3D,"# 3D Filament Annotator +",text/markdown,https://github.com/BIOP/napari-figure,romainGuiet,romain.guiet@epfl.ch,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'microfilm', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/BIOP/napari-figure/issues', 'Documentation, https://github.com/BIOP/napari-figure#README.md', 'Source Code, https://github.com/BIOP/napari-figure', 'User Support, https://github.com/BIOP/napari-figure/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-figure.make_qwidget,Figure maker,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +178,napari-filament-annotator,0.1.2,napari 3D filament annotator,Annotation of filaments / curvilinear structures in 3D,Anna Medyukhina,Apache-2.0,https://github.com/amedyukhina/napari-filament-annotator,63aed46b912363225b83f5a4,['conda'],,https://github.com/amedyukhina/napari-filament-annotator,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-filament-annotator,http://api.anaconda.org/packages/conda-forge/napari-filament-annotator,http://anaconda.org/conda-forge/napari-filament-annotator,['0.1.2'],0.1.2,0.1.2,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.2,conda-forge/napari-filament-annotator/0.1.2,1.0,0.0,2022-12-30 12:07:04.705000+00:00,2023-06-18 08:43:24.064000+00:00,conda,noarch/napari-filament-annotator-0.1.2-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['geometry3d', 'imageio !=2.22.1', 'magicgui', 'napari', 'networkx', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scikit-learn', 'scipy']",noarch,1672401897570.0,None-any-None,pyhd8ed1ab_0,2022-12-30 12:07:05.072000+00:00,7c26a8c655e373ca6442e0d232348ea5,73afbaff80336be45680c7bdfc9ce58b187772d2ee535b48ee6d0b2f5b779a22,25297.0,conda-forge/napari-filament-annotator/0.1.2/noarch/napari-filament-annotator-0.1.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-filament-annotator/0.1.2/noarch/napari-filament-annotator-0.1.2-pyhd8ed1ab_0.conda,conda,0.1.2,conda-forge,['main'],public,,0.2.1,napari-filament-annotator.load_sample_image,Load sample data for napari 3D filament annotator,napari_filament_annotator._sample_data:load_sample_image,,,,2.1,napari-filament-annotator,0.1.2,,Annotation of filaments / curvilinear structures in 3D,"# 3D Filament Annotator [![DOI](https://zenodo.org/badge/513980347.svg)](https://zenodo.org/badge/latestdoi/513980347) [![License Apache Software License 2.0](https://img.shields.io/pypi/l/napari-filament-annotator.svg?color=green)](https://github.com/amedyukhina/napari-filament-annotator/raw/main/LICENSE) @@ -18476,8 +19244,8 @@ https://napari.org/plugins/index.html [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/amedyukhina/napari-filament-annotator,Anna Medyukhina,anna.medyukhina@gmail.com,Apache-2.0,"['Development Status :: 3 - Alpha', 'Framework :: napari', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Geometry3D', 'networkx', 'numpy', 'magicgui', 'pandas', 'qtpy', 'scipy', 'sklearn', 'imageio (!=2.22.1)', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/amedyukhina/napari-filament-annotator/issues', 'Documentation, https://github.com/amedyukhina/napari-filament-annotator#README.md', 'Source Code, https://github.com/amedyukhina/napari-filament-annotator', 'User Support, https://github.com/amedyukhina/napari-filament-annotator/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-filament-annotator.make_annotator_widget,Make Annotator Widget,napari_filament_annotator._widget:AnnotatorWidget,,,,,,,napari-filament-annotator.make_annotator_widget,3D Filament Annotator,False,,,,,,,,,,,,,,,,,,,,napari-filament-annotator.load_sample_image,napari.sample_filament_image_3d,Sample Image,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -171,napari-filaments,0.3.0,napari filaments,A napari plugin for filament analysis,Hanjin Liu,BSD-3-Clause,https://github.com/hanjinliu/napari-filaments,62cbdcbae8e8f33544f48cc5,['conda'],,https://github.com/hanjinliu/napari-filaments,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-filaments,http://api.anaconda.org/packages/conda-forge/napari-filaments,http://anaconda.org/conda-forge/napari-filaments,"['0.2.0', '0.2.1', '0.3.0']",0.2.1,0.3.0,['noarch'],5.0,,['pyhd8ed1ab_0'],0.2.0,conda-forge/napari-filaments/0.2.0,1.0,0.0,2022-07-11 08:17:59.430000+00:00,2023-08-01 03:52:23.832000+00:00,conda,noarch/napari-filaments-0.2.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magic-class >=0.6.7', 'magicgui', 'matplotlib-base', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'scipy']",noarch,1657527337102.0,None-any-None,pyhd8ed1ab_0,2022-07-11 08:17:59.971000+00:00,64a79facdb1b3c3abbc73cba4d2dbd0f,None,119244.0,conda-forge/napari-filaments/0.2.0/noarch/napari-filaments-0.2.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-filaments/0.2.0/noarch/napari-filaments-0.2.0-pyhd8ed1ab_0.tar.bz2,conda,0.2.0,conda-forge,['main'],public,,0.2.1,napari-filaments.make_qwidget,Open Filament Analyzer,napari_filaments._widget:FilamentAnalyzer,,,,2.1,napari-filaments,0.3.0,,A napari plugin for filament analysis,"# napari-filaments +",text/markdown,https://github.com/amedyukhina/napari-filament-annotator,Anna Medyukhina,anna.medyukhina@gmail.com,Apache-2.0,"['Development Status :: 3 - Alpha', 'Framework :: napari', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Geometry3D', 'networkx', 'numpy', 'magicgui', 'pandas', 'qtpy', 'scipy', 'sklearn', 'imageio (!=2.22.1)', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/amedyukhina/napari-filament-annotator/issues', 'Documentation, https://github.com/amedyukhina/napari-filament-annotator#README.md', 'Source Code, https://github.com/amedyukhina/napari-filament-annotator', 'User Support, https://github.com/amedyukhina/napari-filament-annotator/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-filament-annotator.make_annotator_widget,Make Annotator Widget,napari_filament_annotator._widget:AnnotatorWidget,,,,,,,napari-filament-annotator.make_annotator_widget,3D Filament Annotator,False,,,,,,,,,,,,,,,,,,,,napari-filament-annotator.load_sample_image,napari.sample_filament_image_3d,Sample Image,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +179,napari-filaments,0.3.0,napari filaments,A napari plugin for filament analysis,Hanjin Liu,BSD-3-Clause,https://github.com/hanjinliu/napari-filaments,62cbdcbae8e8f33544f48cc5,['conda'],,https://github.com/hanjinliu/napari-filaments,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-filaments,http://api.anaconda.org/packages/conda-forge/napari-filaments,http://anaconda.org/conda-forge/napari-filaments,"['0.2.0', '0.2.1', '0.3.0']",0.2.1,0.3.0,['noarch'],5.0,,['pyhd8ed1ab_0'],0.2.0,conda-forge/napari-filaments/0.2.0,1.0,0.0,2022-07-11 08:17:59.430000+00:00,2023-08-01 03:52:23.832000+00:00,conda,noarch/napari-filaments-0.2.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magic-class >=0.6.7', 'magicgui', 'matplotlib-base', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'scipy']",noarch,1657527337102.0,None-any-None,pyhd8ed1ab_0,2022-07-11 08:17:59.971000+00:00,64a79facdb1b3c3abbc73cba4d2dbd0f,None,119244.0,conda-forge/napari-filaments/0.2.0/noarch/napari-filaments-0.2.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-filaments/0.2.0/noarch/napari-filaments-0.2.0-pyhd8ed1ab_0.tar.bz2,conda,0.2.0,conda-forge,['main'],public,,0.2.1,napari-filaments.make_qwidget,Open Filament Analyzer,napari_filaments._widget:FilamentAnalyzer,,,,2.1,napari-filaments,0.3.0,,A napari plugin for filament analysis,"# napari-filaments [![License BSD-3](https://img.shields.io/pypi/l/napari-filaments.svg?color=green)](https://github.com/hanjinliu/napari-filaments/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-filaments.svg?color=green)](https://pypi.org/project/napari-filaments) @@ -18573,8 +19341,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/hanjinliu/napari-filaments,Hanjin Liu,liuhanjin-sc@g.ecc.u-tokyo.ac.jp,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Topic :: Software Development :: Testing']","['magic-class (>=0.7.3)', 'magicgui', 'matplotlib', 'numpy', 'qtpy', 'scipy', ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""roifile ; extra == 'testing'"", ""tox ; extra == 'testing'""]",>=3.9,"['Bug Tracker, https://github.com/hanjinliu/napari-filaments/issues', 'Documentation, https://github.com/hanjinliu/napari-filaments#README.md', 'Source Code, https://github.com/hanjinliu/napari-filaments', 'User Support, https://github.com/hanjinliu/napari-filaments/issues']",['testing'],False,0.2.1,conda-forge/napari-filaments/0.2.1,0.3.0,conda-forge/napari-filaments/0.3.0,,,conda,noarch/napari-filaments-0.2.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magic-class >=0.6.7', 'magicgui', 'matplotlib-base', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'scipy']",pyhd8ed1ab_0,1660241051106.0,None-any-None,noarch,2022-08-11 18:06:25.572000+00:00,7759af7fbed0b0eb28cc0ee4adb5b736,None,121284.0,conda-forge/napari-filaments/0.2.1/noarch/napari-filaments-0.2.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-filaments/0.2.1/noarch/napari-filaments-0.2.1-pyhd8ed1ab_0.tar.bz2,conda,0.2.1,conda-forge,['main'],conda,noarch/napari-filaments-0.3.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['importlib_metadata', 'macro-kit', 'magic-class >=0.7.3', 'magicgui', 'matplotlib-base', 'napari', 'numpy', 'pandas', 'psygnal', 'python >=3.9', 'qtpy', 'scipy']",noarch,1690861775601.0,None-any-None,pyhd8ed1ab_0,2023-08-01 03:52:22.289000+00:00,23c327ff37b9cdabb37e67925b30ed43,6585370b8f0a64e416113ae968c97dbc30e1184d6c9df5dcc2483011c2387a77,133451.0,conda-forge/napari-filaments/0.3.0/noarch/napari-filaments-0.3.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-filaments/0.3.0/noarch/napari-filaments-0.3.0-pyhd8ed1ab_0.conda,conda,0.3.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-filaments.make_qwidget,Open Filament Analyzer,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -172,napari-file-watcher,0.1.1,napari-file-watcher,A napari plugin for file watching,Xavier Casas Moreno,GPL-3.0,https://github.com/kasasxav/napari-file-watcher,6549a6e7b404149de38e5829,['conda'],,https://pypi.org/project/napari-file-watcher,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-file-watcher,http://api.anaconda.org/packages/conda-forge/napari-file-watcher,http://anaconda.org/conda-forge/napari-file-watcher,['0.1.1'],0.1.1,0.1.1,['noarch'],3.0,https://github.com/kasasxav/napari-file-watcher,['pyh9208f05_1'],0.1.1,conda-forge/napari-file-watcher/0.1.1,1.0,0.0,2023-11-07 02:54:28.965000+00:00,2023-11-07 02:54:31.588000+00:00,conda,noarch/napari-file-watcher-0.1.1-pyh9208f05_1.conda,1.0,GPL-3.0-only,False,python,"['h5py', 'napari', 'ome-zarr', 'python >=3.8', 'qscintilla2', 'qtpy', 'zarr']",noarch,1699325514765.0,None-any-None,pyh9208f05_1,2023-11-07 02:54:29.382000+00:00,41608dabd5023be13447784c1113a6ed,4411741f2bb4f9b6a7875f695008c68fb43d2a51a2b6a794b0665fdf59cf4f7e,25765.0,conda-forge/napari-file-watcher/0.1.1/noarch/napari-file-watcher-0.1.1-pyh9208f05_1.conda,//api.anaconda.org/download/conda-forge/napari-file-watcher/0.1.1/noarch/napari-file-watcher-0.1.1-pyh9208f05_1.conda,conda,0.1.1,conda-forge,['main'],public,,0.2.1,napari-file-watcher.watcher_widget,File watcher,napari_file_watcher.main_module:WatcherWidget,,,,2.1,napari-file-watcher,0.1.1,,A napari plugin for file watching,"# File watcher plugin for napari (napari-file-watcher) +",text/markdown,https://github.com/hanjinliu/napari-filaments,Hanjin Liu,liuhanjin-sc@g.ecc.u-tokyo.ac.jp,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Topic :: Software Development :: Testing']","['magic-class (>=0.7.3)', 'magicgui', 'matplotlib', 'numpy', 'qtpy', 'scipy', ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""roifile ; extra == 'testing'"", ""tox ; extra == 'testing'""]",>=3.9,"['Bug Tracker, https://github.com/hanjinliu/napari-filaments/issues', 'Documentation, https://github.com/hanjinliu/napari-filaments#README.md', 'Source Code, https://github.com/hanjinliu/napari-filaments', 'User Support, https://github.com/hanjinliu/napari-filaments/issues']",['testing'],False,0.2.1,conda-forge/napari-filaments/0.2.1,0.3.0,conda-forge/napari-filaments/0.3.0,,,conda,noarch/napari-filaments-0.2.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magic-class >=0.6.7', 'magicgui', 'matplotlib-base', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'scipy']",pyhd8ed1ab_0,1660241051106.0,None-any-None,noarch,2022-08-11 18:06:25.572000+00:00,7759af7fbed0b0eb28cc0ee4adb5b736,None,121284.0,conda-forge/napari-filaments/0.2.1/noarch/napari-filaments-0.2.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-filaments/0.2.1/noarch/napari-filaments-0.2.1-pyhd8ed1ab_0.tar.bz2,conda,0.2.1,conda-forge,['main'],conda,noarch/napari-filaments-0.3.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['importlib_metadata', 'macro-kit', 'magic-class >=0.7.3', 'magicgui', 'matplotlib-base', 'napari', 'numpy', 'pandas', 'psygnal', 'python >=3.9', 'qtpy', 'scipy']",noarch,1690861775601.0,None-any-None,pyhd8ed1ab_0,2023-08-01 03:52:22.289000+00:00,23c327ff37b9cdabb37e67925b30ed43,6585370b8f0a64e416113ae968c97dbc30e1184d6c9df5dcc2483011c2387a77,133451.0,conda-forge/napari-filaments/0.3.0/noarch/napari-filaments-0.3.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-filaments/0.3.0/noarch/napari-filaments-0.3.0-pyhd8ed1ab_0.conda,conda,0.3.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-filaments.make_qwidget,Open Filament Analyzer,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +180,napari-file-watcher,0.1.1,napari-file-watcher,A napari plugin for file watching,Xavier Casas Moreno,GPL-3.0,https://github.com/kasasxav/napari-file-watcher,6549a6e7b404149de38e5829,['conda'],,https://pypi.org/project/napari-file-watcher,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-file-watcher,http://api.anaconda.org/packages/conda-forge/napari-file-watcher,http://anaconda.org/conda-forge/napari-file-watcher,['0.1.1'],0.1.1,0.1.1,['noarch'],3.0,https://github.com/kasasxav/napari-file-watcher,['pyh9208f05_1'],0.1.1,conda-forge/napari-file-watcher/0.1.1,1.0,0.0,2023-11-07 02:54:28.965000+00:00,2023-11-07 02:54:31.588000+00:00,conda,noarch/napari-file-watcher-0.1.1-pyh9208f05_1.conda,1.0,GPL-3.0-only,False,python,"['h5py', 'napari', 'ome-zarr', 'python >=3.8', 'qscintilla2', 'qtpy', 'zarr']",noarch,1699325514765.0,None-any-None,pyh9208f05_1,2023-11-07 02:54:29.382000+00:00,41608dabd5023be13447784c1113a6ed,4411741f2bb4f9b6a7875f695008c68fb43d2a51a2b6a794b0665fdf59cf4f7e,25765.0,conda-forge/napari-file-watcher/0.1.1/noarch/napari-file-watcher-0.1.1-pyh9208f05_1.conda,//api.anaconda.org/download/conda-forge/napari-file-watcher/0.1.1/noarch/napari-file-watcher-0.1.1-pyh9208f05_1.conda,conda,0.1.1,conda-forge,['main'],public,,0.2.1,napari-file-watcher.watcher_widget,File watcher,napari_file_watcher.main_module:WatcherWidget,,,,2.1,napari-file-watcher,0.1.1,,A napari plugin for file watching,"# File watcher plugin for napari (napari-file-watcher) This plugin contains two widgets: file watcher and script editor. @@ -18625,8 +19393,147 @@ Contributions are welcome, tests are run with pytest. ## Issues Issues can be reported at: https://github.com/kasasxav/napari-file-watcher/issues -",text/markdown,https://github.com/kasasxav/napari-file-watcher,Xavier Casas Moreno,xaviercm@kth.se,GPL-3.0,"['Framework :: napari', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8']","['napari', 'ome-zarr', 'zarr', 'h5py', 'PyQt5', 'qtpy', 'QScintilla']",,"['Bug Tracker, https://github.com/kasasxav/napari-file-watcher', 'Documentation, https://github.com/kasasxav/napari-file-watcher/blob/main/README.md', 'Source Code, https://github.com/kasasxav/napari-file-watcher', 'User Support, https://github.com/kasasxav/napari-file-watcher/issues']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-file-watcher.scripting_widget,Scripting editor,napari_file_watcher.main_module:ScriptingWidget,,,,,,,napari-file-watcher.watcher_widget,File watcher,False,napari-file-watcher.scripting_widget,Scripting editor,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -173,napari-findaureus,0.0.4,napari-findaureus,Locate bacteria in CLSM obtained infected bone tissue images,Shibarjun Mandal,MIT,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-findaureus.get_reader,Open data to locate bacteria,findaureus._reader:napari_get_reader,napari-findaureus.get_reader,"['*.czi', '*.nd2', '*.lif', '*.tiff']",False,2.1,napari-findaureus,0.0.4,,Locate bacteria in CLSM obtained infected bone tissue images,"# napari-findaureus +",text/markdown,https://github.com/kasasxav/napari-file-watcher,Xavier Casas Moreno,xaviercm@kth.se,GPL-3.0,"['Framework :: napari', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8']","['napari', 'ome-zarr', 'zarr', 'h5py', 'PyQt5', 'qtpy', 'QScintilla']",,"['Bug Tracker, https://github.com/kasasxav/napari-file-watcher', 'Documentation, https://github.com/kasasxav/napari-file-watcher/blob/main/README.md', 'Source Code, https://github.com/kasasxav/napari-file-watcher', 'User Support, https://github.com/kasasxav/napari-file-watcher/issues']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-file-watcher.scripting_widget,Scripting editor,napari_file_watcher.main_module:ScriptingWidget,,,,,,,napari-file-watcher.watcher_widget,File watcher,False,napari-file-watcher.scripting_widget,Scripting editor,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +181,napari-file2folder,0.0.1,Save multidimensional file as folder of tifs,Save multidimensional file as folder of tifs,Jules Vanaret," +The MIT License (MIT) + +Copyright (c) 2024 Jules Vanaret + +Permission is hereby granted, free of charge, to any person obtaining a copy +of this software and associated documentation files (the ""Software""), to deal +in the Software without restriction, including without limitation the rights +to use, copy, modify, merge, publish, distribute, sublicense, and/or sell +copies of the Software, and to permit persons to whom the Software is +furnished to do so, subject to the following conditions: + +The above copyright notice and this permission notice shall be included in +all copies or substantial portions of the Software. + +THE SOFTWARE IS PROVIDED ""AS IS"", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR +IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, +FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE +AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER +LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, +OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN +THE SOFTWARE. +",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-file2folder.make_qwidget,Save multidimensional file as folder of tifs,napari_file2folder:File2FolderWidget,,,,2.1,napari-file2folder,0.0.1,,Save multidimensional file as folder of tifs,"# napari-file2folder + +[![License MIT](https://img.shields.io/pypi/l/napari-file2folder.svg?color=green)](https://github.com/jules-vanaret/napari-file2folder/raw/main/LICENSE) +[![PyPI](https://img.shields.io/pypi/v/napari-file2folder.svg?color=green)](https://pypi.org/project/napari-file2folder) +[![Python Version](https://img.shields.io/pypi/pyversions/napari-file2folder.svg?color=green)](https://python.org) +[![tests](https://github.com/jules-vanaret/napari-file2folder/workflows/tests/badge.svg)](https://github.com/jules-vanaret/napari-file2folder/actions) +[![codecov](https://codecov.io/gh/jules-vanaret/napari-file2folder/branch/main/graph/badge.svg)](https://codecov.io/gh/jules-vanaret/napari-file2folder) +[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-file2folder)](https://napari-hub.org/plugins/napari-file2folder) + + + +A plugin to inspect bioimages (e.g. .tif, .czi, .nd2, .lsm...) and save them as individual .tif files in a folder. + +`napari-file2folder` is a [napari] plugin that is part of the [Tapenade](https://github.com/GuignardLab/tapenade) project. Tapenade is a tool for the analysis of dense 3D tissues acquired with deep imaging microscopy. It is designed to be user-friendly and to provide a comprehensive analysis of the data. + +If you use this plugin for your research, please [cite us](https://github.com/GuignardLab/tapenade/blob/main/README.md#how-to-cite). + +## Overview + + + +This plugin allows you to inspect (possibly large) bioimages by displaying their shape (number of elements in each dimension), and allowing you to save each element along a chosen dimension as a separate .tif file in a folder. This is useful when you have a large movie or stack of images and you want to save each frame or slice as a separate file. Optionally, the plugin allows the user to visualize the middle element of a given dimension to help the user decide which dimension to save as separate files. + +The plugin currently supports the following file formats: +- .tif +- .ome.tiff +- .zarr +- .ome.zarr +- .nd2 +- .lsm +- .czi + +This plugin leverages [tifffile], [bioio], and [zarr] to circumvent loading the entire images in memory, which allows inspection of very large images. + +> [!CAUTION] +> When inspecting the middle element of a dimension, or when saving one element of a dimension as a separate file, the plugin loads the element in memory, which means that at least this lone element must fit in memory. + +## Installation + +The plugin obviously requires [napari] to run. If you don't have it yet, follow the instructions [here](https://napari.org/stable/tutorials/fundamentals/installation.html). + +The simplest way to install `napari-file2folder` is via the [napari] plugin manager. Open Napari, go to `Plugins > Install/Uninstall Packages...` and search for `napari-file2folder`. Click on the install button and you are ready to go! + +You can install `napari-file2folder` via [pip]: + + pip install napari-file2folder + + + + +## Contributing + +Contributions are very welcome. Tests can be run with [tox], please ensure +the coverage at least stays the same before you submit a pull request. + +## License + +Distributed under the terms of the [MIT] license, +""napari-file2folder"" is free and open source software + +## Issues + +If you encounter any problems, please [file an issue] along with a detailed description. + +---------------------------------- + +This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template. + + + +[napari]: https://github.com/napari/napari +[Cookiecutter]: https://github.com/audreyr/cookiecutter +[@napari]: https://github.com/napari +[MIT]: http://opensource.org/licenses/MIT +[BSD-3]: http://opensource.org/licenses/BSD-3-Clause +[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt +[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt +[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0 +[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt +[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin + +[napari]: https://github.com/napari/napari +[tox]: https://tox.readthedocs.io/en/latest/ +[pip]: https://pypi.org/project/pip/ +[PyPI]: https://pypi.org/ +[tifffile]: https://github.com/cgohlke/tifffile +[bioio]: https://github.com/bioio-devs/bioio +[zarr]: https://github.com/zarr-developers/zarr-python +",text/markdown,,Jules Vanaret,jules.vanaret@univ-amu.fr," +The MIT License (MIT) + +Copyright (c) 2024 Jules Vanaret + +Permission is hereby granted, free of charge, to any person obtaining a copy +of this software and associated documentation files (the ""Software""), to deal +in the Software without restriction, including without limitation the rights +to use, copy, modify, merge, publish, distribute, sublicense, and/or sell +copies of the Software, and to permit persons to whom the Software is +furnished to do so, subject to the following conditions: + +The above copyright notice and this permission notice shall be included in +all copies or substantial portions of the Software. + +THE SOFTWARE IS PROVIDED ""AS IS"", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR +IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, +FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE +AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER +LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, +OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN +THE SOFTWARE. +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'qtpy', 'magicgui', 'tifffile', 'bioio', 'bioio-ome-tiff', 'bioio-ome-zarr', 'bioio-nd2', 'bioio-czi', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.9,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",,,,,,,,,,napari-file2folder.make_qwidget,Save multidimensional file as folder of tifs,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +182,napari-findaureus,0.0.4,napari-findaureus,Locate bacteria in CLSM obtained infected bone tissue images,Shibarjun Mandal,MIT,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-findaureus.get_reader,Open data to locate bacteria,findaureus._reader:napari_get_reader,napari-findaureus.get_reader,"['*.czi', '*.nd2', '*.lif', '*.tiff']",False,2.1,napari-findaureus,0.0.4,,Locate bacteria in CLSM obtained infected bone tissue images,"# napari-findaureus ""Findaureus"" is now available to use in napari.

@@ -18697,8 +19604,8 @@ Mandal S, Tannert A, Ebert C, Guliev RR, Ozegowski Y, Carvalho L, Wildemann B, E ## Acknowledgements This project is a part of the European Union's Horizon 2020 research and innovation program under grant agreement No 861122 (ITN IMAGE-IN). We acknowledge support from the Jena Biophotonics and Imaging Laboratory (JBIL), from the European Union via EFRE funds within the Thüringer Innovationszentrum für Medizintechnik-Lösungen (ThIMEDOP, FKZ IZN 2018 0002), the BMBF via the funding program Photonics Research Germany (LPI, FKZ: 13N15713) and via the CSCC (FKZ 01EO1502) and the Institute of Anatomical and Molecular Pathology, University Coimbra, Portugal. -",text/markdown,,Shibarjun Mandal,shibarjunmandal@gmail.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['magicgui', 'qtpy', 'napari[all]', 'aicsimageio ==4.11.0', 'nd2 ==0.5.3', 'aicspylibczi ==3.1.2', 'fsspec ==2023.5.0', 'readlif ==0.6.5', 'czifile ==2019.7.2', 'tifffile ==2023.7.10', 'webcolors ==1.13', 'opencv-python ==4.7.0.72', 'numpy ==1.24.3', 'scikit-image ==0.20.0', 'xmltodict', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-findaureus.make_magic_widget,napari-findaureus,findaureus._widget:Find_Bacteria,,,,,,,napari-findaureus.make_magic_widget,napari-findaureus,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -174,napari-flim-phasor-plotter,0.1.2,FLIM phasor plotter,A plugin that performs phasor plot from TCSPC FLIM data.,"Marcelo L. Zoccoler, Cornelia Wetzker",BSD-3-Clause,https://github.com/zoccoler/napari-flim-phasor-plotter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-flim-phasor-plotter.get_reader,Open data with FLIM phasor plotter,napari_flim_phasor_plotter._reader:napari_get_reader,napari-flim-phasor-plotter.get_reader,"['*.ptu', '*.PTU', '*.sdt', '*.SDT', '*.tif', '*.zarr']",True,2.1,napari-flim-phasor-plotter,0.1.2,,A plugin that performs phasor plot from TCSPC FLIM data.,"# napari-flim-phasor-plotter +",text/markdown,,Shibarjun Mandal,shibarjunmandal@gmail.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['magicgui', 'qtpy', 'napari[all]', 'aicsimageio ==4.11.0', 'nd2 ==0.5.3', 'aicspylibczi ==3.1.2', 'fsspec ==2023.5.0', 'readlif ==0.6.5', 'czifile ==2019.7.2', 'tifffile ==2023.7.10', 'webcolors ==1.13', 'opencv-python ==4.7.0.72', 'numpy ==1.24.3', 'scikit-image ==0.20.0', 'xmltodict', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-findaureus.make_magic_widget,napari-findaureus,findaureus._widget:Find_Bacteria,,,,,,,napari-findaureus.make_magic_widget,napari-findaureus,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +183,napari-flim-phasor-plotter,0.1.2,FLIM phasor plotter,A plugin that performs phasor plot from TCSPC FLIM data.,"Marcelo L. Zoccoler, Cornelia Wetzker",BSD-3-Clause,https://github.com/zoccoler/napari-flim-phasor-plotter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-flim-phasor-plotter.get_reader,Open data with FLIM phasor plotter,napari_flim_phasor_plotter._reader:napari_get_reader,napari-flim-phasor-plotter.get_reader,"['*.ptu', '*.PTU', '*.sdt', '*.SDT', '*.tif', '*.zarr']",True,2.1,napari-flim-phasor-plotter,0.1.2,,A plugin that performs phasor plot from TCSPC FLIM data.,"# napari-flim-phasor-plotter [![License BSD-3](https://img.shields.io/pypi/l/napari-flim-phasor-plotter.svg?color=green)](https://github.com/zoccoler/napari-flim-phasor-plotter/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-flim-phasor-plotter.svg?color=green)](https://pypi.org/project/napari-flim-phasor-plotter) @@ -18918,8 +19825,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/zoccoler/napari-flim-phasor-plotter,"Marcelo L. Zoccoler, Cornelia Wetzker",marzoccoler@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'napari>=0.4.19', 'napari-clusters-plotter>=0.8.1', 'ptufile', 'sdtfile', 'natsort', 'rocket-fft', 'dask', 'zarr', 'napari-segment-blobs-and-things-with-membranes', 'napari-skimage-regionprops', 'scikit-image>=0.20.0', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.9,"['Bug Tracker, https://github.com/zoccoler/napari-flim-phasor-plotter/issues', 'Documentation, https://github.com/zoccoler/napari-flim-phasor-plotter#README.md', 'Source Code, https://github.com/zoccoler/napari-flim-phasor-plotter', 'User Support, https://github.com/zoccoler/napari-flim-phasor-plotter/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-flim-phasor-plotter.load_seminal_receptacle_image,Load sample data from FLIM phasor plotter,napari_flim_phasor_plotter._sample_data:load_seminal_receptacle_image,napari-flim-phasor-plotter.load_hazelnut_image,Load sample data from FLIM phasor plotter,napari_flim_phasor_plotter._sample_data:load_hazelnut_image,napari-flim-phasor-plotter.load_hazelnut_z_stack,Load sample data from FLIM phasor plotter,napari_flim_phasor_plotter._sample_data:load_hazelnut_z_stack,napari-flim-phasor-plotter.calculate_phasors,Calculate Phasors,False,napari-flim-phasor-plotter.convert_to_zarr,Convert to zarr,False,napari-flim-phasor-plotter.apply_binning,Apply binning to TCSPC FLIM data,False,napari-flim-phasor-plotter.open_phasor_plot,Phasor Plotter Widget,False,napari-flim-phasor-plotter.load_lifetime_cat_synthetic,Load sample data from FLIM phasor plotter,napari_flim_phasor_plotter._sample_data:load_lifetime_cat_synthtetic_single_image,,,,,,,,napari-flim-phasor-plotter.load_seminal_receptacle_image,receptacle,Seminal Receptacle (2D Raw FLIM),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-flim-phasor-plotter.load_hazelnut_image,hazelnut,Hazelnut (2D Raw FLIM),napari-flim-phasor-plotter.calculate_phasors,Calculate Phasors,napari_flim_phasor_plotter._widget:make_flim_phasor_plot,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-flim-phasor-plotter.open_phasor_plot,Open FLIM Phasor Plotter,napari_flim_phasor_plotter._plotting:PhasorPlotterWidget,napari-flim-phasor-plotter.convert_to_zarr,Convert to zarr,napari_flim_phasor_plotter._io.convert_to_zarr:convert_folder_to_zarr,napari-flim-phasor-plotter.apply_binning,Apply binning to TCSPC FLIM data,napari_flim_phasor_plotter._widget:apply_binning_widget,napari-flim-phasor-plotter.Split_N_Largest_Cluster_Labels,Split N Largest Clusters Labels,napari_flim_phasor_plotter._widget:Split_N_Largest_Cluster_Labels,napari-flim-phasor-plotter.manual_label_extract,Manual Label Extract,napari_flim_phasor_plotter._widget:manual_label_extract,napari-flim-phasor-plotter.smooth_cluster_mask,Smooth Cluster Mask,napari_flim_phasor_plotter._widget:smooth_cluster_mask,,napari-flim-phasor-plotter.Split_N_Largest_Cluster_Labels,Split N Largest Clusters Labels,False,napari-flim-phasor-plotter.manual_label_extract,Manual Label Extraction,True,napari-flim-phasor-plotter.smooth_cluster_mask,Smooth Cluster Mask,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-flim-phasor-plotter.load_hazelnut_z_stack,hazelnut_z_stack,Hazelnut (3D Raw FLIM) -175,napari-folder-browser,0.1.4,napari-folder-browser,Browse folders of images and open them using double-click,Robert Haase,BSD-3-Clause,https://github.com/haesleinhuepf/napari-folder-browser,61fd272e302e80ce8c295e4c,['conda'],,https://github.com/haesleinhuepf/napari-folder-browser,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-folder-browser,http://api.anaconda.org/packages/conda-forge/napari-folder-browser,http://anaconda.org/conda-forge/napari-folder-browser,['0.1.3'],0.1.3,0.1.3,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.3,conda-forge/napari-folder-browser/0.1.3,1.0,0.0,2022-02-04 13:16:28.112000+00:00,2023-06-18 08:40:46.752000+00:00,conda,noarch/napari-folder-browser-0.1.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'python >=3.7']",noarch,1643980435942.0,None-any-None,pyhd8ed1ab_0,2022-02-04 13:16:28.917000+00:00,208078db96ffb5cc5a2a30256ba1ac99,None,9638.0,conda-forge/napari-folder-browser/0.1.3/noarch/napari-folder-browser-0.1.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-folder-browser/0.1.3/noarch/napari-folder-browser-0.1.3-pyhd8ed1ab_0.tar.bz2,conda,0.1.3,conda-forge,['main'],public,,0.2.1,napari-folder-browser.FolderBrowser,FolderBrowser,napari_folder_browser._dock_widget:FolderBrowser,,,,2.1,napari-folder-browser,0.1.4,,Browse folders of images and open them using double-click,"# napari-folder-browser +",text/markdown,https://github.com/zoccoler/napari-flim-phasor-plotter,"Marcelo L. Zoccoler, Cornelia Wetzker",marzoccoler@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'napari>=0.4.19', 'napari-clusters-plotter>=0.8.1', 'ptufile', 'sdtfile', 'natsort', 'rocket-fft', 'dask', 'zarr', 'napari-segment-blobs-and-things-with-membranes', 'napari-skimage-regionprops', 'scikit-image>=0.20.0', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.9,"['Bug Tracker, https://github.com/zoccoler/napari-flim-phasor-plotter/issues', 'Documentation, https://github.com/zoccoler/napari-flim-phasor-plotter#README.md', 'Source Code, https://github.com/zoccoler/napari-flim-phasor-plotter', 'User Support, https://github.com/zoccoler/napari-flim-phasor-plotter/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-flim-phasor-plotter.load_seminal_receptacle_image,Load sample data from FLIM phasor plotter,napari_flim_phasor_plotter._sample_data:load_seminal_receptacle_image,napari-flim-phasor-plotter.load_hazelnut_image,Load sample data from FLIM phasor plotter,napari_flim_phasor_plotter._sample_data:load_hazelnut_image,napari-flim-phasor-plotter.load_hazelnut_z_stack,Load sample data from FLIM phasor plotter,napari_flim_phasor_plotter._sample_data:load_hazelnut_z_stack,napari-flim-phasor-plotter.calculate_phasors,Calculate Phasors,False,napari-flim-phasor-plotter.convert_to_zarr,Convert to zarr,False,napari-flim-phasor-plotter.apply_binning,Apply binning to TCSPC FLIM data,False,napari-flim-phasor-plotter.open_phasor_plot,Phasor Plotter Widget,False,napari-flim-phasor-plotter.load_lifetime_cat_synthetic,Load sample data from FLIM phasor plotter,napari_flim_phasor_plotter._sample_data:load_lifetime_cat_synthtetic_single_image,,,,,,,,napari-flim-phasor-plotter.load_seminal_receptacle_image,receptacle,Seminal Receptacle (2D Raw FLIM),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-flim-phasor-plotter.load_hazelnut_image,hazelnut,Hazelnut (2D Raw FLIM),napari-flim-phasor-plotter.calculate_phasors,Calculate Phasors,napari_flim_phasor_plotter._widget:make_flim_phasor_plot,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-flim-phasor-plotter.open_phasor_plot,Open FLIM Phasor Plotter,napari_flim_phasor_plotter._plotting:PhasorPlotterWidget,napari-flim-phasor-plotter.convert_to_zarr,Convert to zarr,napari_flim_phasor_plotter._io.convert_to_zarr:convert_folder_to_zarr,napari-flim-phasor-plotter.apply_binning,Apply binning to TCSPC FLIM data,napari_flim_phasor_plotter._widget:apply_binning_widget,napari-flim-phasor-plotter.Split_N_Largest_Cluster_Labels,Split N Largest Clusters Labels,napari_flim_phasor_plotter._widget:Split_N_Largest_Cluster_Labels,napari-flim-phasor-plotter.manual_label_extract,Manual Label Extract,napari_flim_phasor_plotter._widget:manual_label_extract,,napari-flim-phasor-plotter.Split_N_Largest_Cluster_Labels,Split N Largest Clusters Labels,False,napari-flim-phasor-plotter.manual_label_extract,Manual Label Extraction,True,napari-flim-phasor-plotter.smooth_cluster_mask,Smooth Cluster Mask,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-flim-phasor-plotter.load_hazelnut_z_stack,hazelnut_z_stack,Hazelnut (3D Raw FLIM) +184,napari-folder-browser,0.1.4,napari-folder-browser,Browse folders of images and open them using double-click,Robert Haase,BSD-3-Clause,https://github.com/haesleinhuepf/napari-folder-browser,61fd272e302e80ce8c295e4c,['conda'],,https://github.com/haesleinhuepf/napari-folder-browser,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-folder-browser,http://api.anaconda.org/packages/conda-forge/napari-folder-browser,http://anaconda.org/conda-forge/napari-folder-browser,['0.1.3'],0.1.3,0.1.3,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.3,conda-forge/napari-folder-browser/0.1.3,1.0,0.0,2022-02-04 13:16:28.112000+00:00,2023-06-18 08:40:46.752000+00:00,conda,noarch/napari-folder-browser-0.1.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'python >=3.7']",noarch,1643980435942.0,None-any-None,pyhd8ed1ab_0,2022-02-04 13:16:28.917000+00:00,208078db96ffb5cc5a2a30256ba1ac99,None,9638.0,conda-forge/napari-folder-browser/0.1.3/noarch/napari-folder-browser-0.1.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-folder-browser/0.1.3/noarch/napari-folder-browser-0.1.3-pyhd8ed1ab_0.tar.bz2,conda,0.1.3,conda-forge,['main'],public,,0.2.1,napari-folder-browser.FolderBrowser,FolderBrowser,napari_folder_browser._dock_widget:FolderBrowser,,,,2.1,napari-folder-browser,0.1.4,,Browse folders of images and open them using double-click,"# napari-folder-browser [![License](https://img.shields.io/pypi/l/napari-folder-browser.svg?color=green)](https://github.com/haesleinhuepf/napari-folder-browser/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-folder-browser.svg?color=green)](https://pypi.org/project/napari-folder-browser) @@ -18993,8 +19900,8 @@ If you encounter any problems, please create a thread on [image.sc] along with a [image.sc]: https://image.sc [@haesleinhuepf]: https://twitter.com/haesleinhuepf -",text/markdown,https://github.com/haesleinhuepf/napari-folder-browser,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine >=0.1.4', 'napari-tools-menu']",>=3.7,"['Bug Tracker, https://github.com/haesleinhuepf/napari-folder-browser/issues', 'Documentation, https://github.com/haesleinhuepf/napari-folder-browser#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-folder-browser', 'User Support, https://github.com/haesleinhuepf/napari-folder-browser/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-folder-browser.FolderBrowser,FolderBrowser,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -176,napari-gemspa,0.0.4,GEMspa,A plugin for analysis of single particle tracking experiments,Sarah Keegan,BSD-3-Clause,https://github.com/liamholtlab/napari-gemspa,657382faf106edd0dde3de42,['conda'],,https://github.com/liamholtlab/napari-gemspa,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-gemspa,http://api.anaconda.org/packages/conda-forge/napari-gemspa,http://anaconda.org/conda-forge/napari-gemspa,"['0.0.1', '0.0.4']",0.0.4,0.0.4,['noarch'],5.0,https://github.com/liamholtlab/napari-gemspa,['pyh9208f05_0'],0.0.1,conda-forge/napari-gemspa/0.0.1,1.0,0.0,2023-12-08 20:56:22.089000+00:00,2023-12-09 00:56:50.904000+00:00,conda,noarch/napari-gemspa-0.0.1-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['gemspa-spt', 'magicgui', 'matplotlib-base', 'napari', 'nd2', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'trackpy']",noarch,1702068843706.0,None-any-None,pyh9208f05_0,2023-12-08 20:56:22.453000+00:00,b722ca6449478256e7717f15494ac5a1,308ced25ceb41b878230b0bda2a82c5191587fc95cc1750a625e5eb11fc94bc4,28815.0,conda-forge/napari-gemspa/0.0.1/noarch/napari-gemspa-0.0.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-gemspa/0.0.1/noarch/napari-gemspa-0.0.1-pyh9208f05_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-gemspa.get_reader,Open data with GEMspa,napari_gemspa._reader:napari_get_reader,napari-gemspa.get_reader,"['*.txt', '*.csv', '*.tsv']",False,2.1,napari-gemspa,0.0.4,,A plugin for analysis of single particle tracking experiments,"# napari-gemspa +",text/markdown,https://github.com/haesleinhuepf/napari-folder-browser,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine >=0.1.4', 'napari-tools-menu']",>=3.7,"['Bug Tracker, https://github.com/haesleinhuepf/napari-folder-browser/issues', 'Documentation, https://github.com/haesleinhuepf/napari-folder-browser#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-folder-browser', 'User Support, https://github.com/haesleinhuepf/napari-folder-browser/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-folder-browser.FolderBrowser,FolderBrowser,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +185,napari-gemspa,0.0.4,GEMspa,A plugin for analysis of single particle tracking experiments,Sarah Keegan,BSD-3-Clause,https://github.com/liamholtlab/napari-gemspa,657382faf106edd0dde3de42,['conda'],,https://github.com/liamholtlab/napari-gemspa,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-gemspa,http://api.anaconda.org/packages/conda-forge/napari-gemspa,http://anaconda.org/conda-forge/napari-gemspa,"['0.0.1', '0.0.4']",0.0.4,0.0.4,['noarch'],5.0,https://github.com/liamholtlab/napari-gemspa,['pyh9208f05_0'],0.0.1,conda-forge/napari-gemspa/0.0.1,1.0,0.0,2023-12-08 20:56:22.089000+00:00,2023-12-09 00:56:50.904000+00:00,conda,noarch/napari-gemspa-0.0.1-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['gemspa-spt', 'magicgui', 'matplotlib-base', 'napari', 'nd2', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'trackpy']",noarch,1702068843706.0,None-any-None,pyh9208f05_0,2023-12-08 20:56:22.453000+00:00,b722ca6449478256e7717f15494ac5a1,308ced25ceb41b878230b0bda2a82c5191587fc95cc1750a625e5eb11fc94bc4,28815.0,conda-forge/napari-gemspa/0.0.1/noarch/napari-gemspa-0.0.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-gemspa/0.0.1/noarch/napari-gemspa-0.0.1-pyh9208f05_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-gemspa.get_reader,Open data with GEMspa,napari_gemspa._reader:napari_get_reader,napari-gemspa.get_reader,"['*.txt', '*.csv', '*.tsv']",False,2.1,napari-gemspa,0.0.4,,A plugin for analysis of single particle tracking experiments,"# napari-gemspa This plugin provides for analysis tools for data from single particle tracking experiments. It provides an interface for particle localization and tracking using [trackpy](http://soft-matter.github.io/trackpy/dev/index.html). It also allows for import of tracking data from Mosaic and Trackmate. These files must be tab/comma delimited text files. It provides an option to exclude particles/tracks masked with a labels layer. @@ -19162,8 +20069,8 @@ Here is an example: ![My Image](https://raw.githubusercontent.com/liamholtlab/napari-gemspa/main/screen_shots/5_12.png) -",text/markdown,https://github.com/liamholtlab/napari-gemspa,Sarah Keegan,sarah.keegan@nyulangone.org,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'pandas', 'napari', 'scikit-image', 'gemspa-spt', 'matplotlib', 'trackpy', 'nd2', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/liamholtlab/napari-gemspa/issues', 'Documentation, https://github.com/liamholtlab/napari-gemspa#README.md', 'Source Code, https://github.com/liamholtlab/napari-gemspa', 'User Support, https://github.com/liamholtlab/napari-gemspa/issues']",['testing'],False,0.0.4,conda-forge/napari-gemspa/0.0.4,,,,,conda,noarch/napari-gemspa-0.0.4-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['gemspa-spt', 'magicgui', 'matplotlib-base', 'napari', 'nd2', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'trackpy']",pyh9208f05_0,1702083257398.0,None-any-None,noarch,2023-12-09 00:56:49.591000+00:00,977ffc3223a1f10c722fecd3dc805c36,9e2dacc38655ff46590b153f9c9bdce1fe3c2fdd5a493741e54f1ab61ec773e3,33273.0,conda-forge/napari-gemspa/0.0.4/noarch/napari-gemspa-0.0.4-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-gemspa/0.0.4/noarch/napari-gemspa-0.0.4-pyh9208f05_0.conda,conda,0.0.4,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-gemspa.write_points,Save points layer data with GEMspa,napari_gemspa._writer:write_points,napari-gemspa.write_tracks,Save tracks layer data with GEMspa,napari_gemspa._writer:write_tracks,napari-gemspa.make_gemspa_plugin,Make GEMspa plugin,napari_gemspa._gemspa_plugin:GEMspaPlugin,napari-gemspa.make_gemspa_plugin,GEMspa,False,,,,,,,,,,,,,napari-gemspa.write_points,['points'],,napari-gemspa.write_tracks,['tracks'],"['.txt', '.csv', '.tsv']",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['.txt', '.csv', '.tsv']",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -177,napari-generic-SIMulator,0.1.3,napari generic SIMulator,A napari plugin to simulate raw-image stacks of Structured illumination microscopy (SIM).,Meizhu Liang,BSD-3-Clause,https://github.com/Meizhu-Liang/napari-generic-SIMulator,62fe5867b83b1da43e7f7e1e,['conda'],,https://github.com/Meizhu-Liang/napari-generic-SIMulator,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-generic-simulator,http://api.anaconda.org/packages/conda-forge/napari-generic-simulator,http://anaconda.org/conda-forge/napari-generic-simulator,"['0.0.9', '0.0.13', '0.0.15', '0.0.18', '0.0.19']",0.0.19,0.0.19,['noarch'],7.0,,['pyhd8ed1ab_0'],0.0.9,conda-forge/napari-generic-simulator/0.0.9,1.0,0.0,2022-08-18 15:19:00.512000+00:00,2023-06-18 08:42:20.608000+00:00,conda,noarch/napari-generic-simulator-0.0.9-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'tifffile']",noarch,1660835812270.0,None-any-None,pyhd8ed1ab_0,2022-08-18 15:19:00.945000+00:00,873a6e6071b9afd32ea0d0e17e5c7ee8,None,16076.0,conda-forge/napari-generic-simulator/0.0.9/noarch/napari-generic-simulator-0.0.9-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-generic-simulator/0.0.9/noarch/napari-generic-simulator-0.0.9-pyhd8ed1ab_0.tar.bz2,conda,0.0.9,conda-forge,['main'],public,,0.2.1,napari-generic-SIMulator.make_pointcloud_widget,Point cloud generator,napari_generic_simulator._widget:PointCloud,,,,2.1,napari-generic-SIMulator,0.1.3,,A napari plugin to simulate raw-image stacks of Structured illumination microscopy (SIM).,"# napari-generic-SIMulator +",text/markdown,https://github.com/liamholtlab/napari-gemspa,Sarah Keegan,sarah.keegan@nyulangone.org,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'pandas', 'napari', 'scikit-image', 'gemspa-spt', 'matplotlib', 'trackpy', 'nd2', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/liamholtlab/napari-gemspa/issues', 'Documentation, https://github.com/liamholtlab/napari-gemspa#README.md', 'Source Code, https://github.com/liamholtlab/napari-gemspa', 'User Support, https://github.com/liamholtlab/napari-gemspa/issues']",['testing'],False,0.0.4,conda-forge/napari-gemspa/0.0.4,,,,,conda,noarch/napari-gemspa-0.0.4-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['gemspa-spt', 'magicgui', 'matplotlib-base', 'napari', 'nd2', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'trackpy']",pyh9208f05_0,1702083257398.0,None-any-None,noarch,2023-12-09 00:56:49.591000+00:00,977ffc3223a1f10c722fecd3dc805c36,9e2dacc38655ff46590b153f9c9bdce1fe3c2fdd5a493741e54f1ab61ec773e3,33273.0,conda-forge/napari-gemspa/0.0.4/noarch/napari-gemspa-0.0.4-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-gemspa/0.0.4/noarch/napari-gemspa-0.0.4-pyh9208f05_0.conda,conda,0.0.4,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-gemspa.write_points,Save points layer data with GEMspa,napari_gemspa._writer:write_points,napari-gemspa.write_tracks,Save tracks layer data with GEMspa,napari_gemspa._writer:write_tracks,napari-gemspa.make_gemspa_plugin,Make GEMspa plugin,napari_gemspa._gemspa_plugin:GEMspaPlugin,napari-gemspa.make_gemspa_plugin,GEMspa,False,,,,,,,,,,,,,napari-gemspa.write_points,['points'],,napari-gemspa.write_tracks,['tracks'],"['.txt', '.csv', '.tsv']",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['.txt', '.csv', '.tsv']",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +186,napari-generic-SIMulator,0.1.3,napari generic SIMulator,A napari plugin to simulate raw-image stacks of Structured illumination microscopy (SIM).,Meizhu Liang,BSD-3-Clause,https://github.com/Meizhu-Liang/napari-generic-SIMulator,62fe5867b83b1da43e7f7e1e,['conda'],,https://github.com/Meizhu-Liang/napari-generic-SIMulator,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-generic-simulator,http://api.anaconda.org/packages/conda-forge/napari-generic-simulator,http://anaconda.org/conda-forge/napari-generic-simulator,"['0.0.9', '0.0.13', '0.0.15', '0.0.18', '0.0.19']",0.0.19,0.0.19,['noarch'],7.0,,['pyhd8ed1ab_0'],0.0.9,conda-forge/napari-generic-simulator/0.0.9,1.0,0.0,2022-08-18 15:19:00.512000+00:00,2023-06-18 08:42:20.608000+00:00,conda,noarch/napari-generic-simulator-0.0.9-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'tifffile']",noarch,1660835812270.0,None-any-None,pyhd8ed1ab_0,2022-08-18 15:19:00.945000+00:00,873a6e6071b9afd32ea0d0e17e5c7ee8,None,16076.0,conda-forge/napari-generic-simulator/0.0.9/noarch/napari-generic-simulator-0.0.9-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-generic-simulator/0.0.9/noarch/napari-generic-simulator-0.0.9-pyhd8ed1ab_0.tar.bz2,conda,0.0.9,conda-forge,['main'],public,,0.2.1,napari-generic-SIMulator.make_pointcloud_widget,Point cloud generator,napari_generic_simulator._widget:PointCloud,,,,2.1,napari-generic-SIMulator,0.1.3,,A napari plugin to simulate raw-image stacks of Structured illumination microscopy (SIM).,"# napari-generic-SIMulator [![License BSD-3](https://img.shields.io/pypi/l/napari-generic-SIMulator.svg?color=green)](https://github.com/Meizhu-Liang/napari-generic-SIMulator/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-generic-SIMulator.svg?color=green)](https://pypi.org/project/napari-generic-SIMulator) @@ -19289,8 +20196,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/Meizhu-Liang/napari-generic-SIMulator,Meizhu Liang,ml2618@ic.ac.uk,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10']","['numpy', 'magicgui', 'qtpy', 'tifffile', 'opt-einsum', 'matplotlib', 'pypcd-imp', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""', 'tifffile; extra == ""testing""', 'pypcd-imp; extra == ""testing""', 'opt-einsum; extra == ""testing""', 'matplotlib; extra == ""testing""']",>=3.8,"['Bug Tracker, https://github.com/Meizhu-Liang/napari-generic-SIMulator/issues', 'Documentation, https://github.com/Meizhu-Liang/napari-generic-SIMulator#README.md', 'Source Code, https://github.com/Meizhu-Liang/napari-generic-SIMulator', 'User Support, https://github.com/Meizhu-Liang/napari-generic-SIMulator/issues']",['testing'],False,0.0.13,conda-forge/napari-generic-simulator/0.0.13,0.0.15,conda-forge/napari-generic-simulator/0.0.15,0.0.18,conda-forge/napari-generic-simulator/0.0.18,conda,noarch/napari-generic-simulator-0.0.13-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'tifffile']",pyhd8ed1ab_0,1660887682074.0,None-any-None,noarch,2022-08-19 05:43:24.568000+00:00,0f5056a891fcaba3f2c8f2ef0973f19b,None,17728.0,conda-forge/napari-generic-simulator/0.0.13/noarch/napari-generic-simulator-0.0.13-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-generic-simulator/0.0.13/noarch/napari-generic-simulator-0.0.13-pyhd8ed1ab_0.tar.bz2,conda,0.0.13,conda-forge,['main'],conda,noarch/napari-generic-simulator-0.0.15-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'tifffile']",noarch,1662501587805.0,None-any-None,pyhd8ed1ab_0,2022-09-06 22:02:13.449000+00:00,f3d518a9916e684659b7c9bc3464acaa,None,16864.0,conda-forge/napari-generic-simulator/0.0.15/noarch/napari-generic-simulator-0.0.15-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-generic-simulator/0.0.15/noarch/napari-generic-simulator-0.0.15-pyhd8ed1ab_0.tar.bz2,conda,0.0.15,conda-forge,['main'],conda,noarch/napari-generic-simulator-0.0.18-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'tifffile']",BSD-3-Clause,python,1663625603292.0,2022-09-19 22:15:33.601000+00:00,c8d404707543352dbe9c3373a2ea7b59,None,16877.0,conda-forge/napari-generic-simulator/0.0.18/noarch/napari-generic-simulator-0.0.18-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-generic-simulator/0.0.18/noarch/napari-generic-simulator-0.0.18-pyhd8ed1ab_0.tar.bz2,conda,0.0.18,conda-forge,['main'],,napari-generic-SIMulator.make_simulator_widget,SIM data generator,napari_generic_simulator._widget:SIMulator,,,,,,,napari-generic-SIMulator.make_pointcloud_widget,Point cloud generator,False,napari-generic-SIMulator.make_simulator_widget,SIM data generator,False,,,,,,,,,,,,,,,,,,,,0.0.19,conda-forge/napari-generic-simulator/0.0.19,,,,,conda,noarch/napari-generic-simulator-0.0.19-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'tifffile']",noarch,1673987713417.0,None-any-None,pyhd8ed1ab_0,2023-01-17 20:36:51.780000+00:00,6c789478efc6208da86ff04f16eaf19e,f481bb8a4cb64c9bae163caed1d4ff6fcaa8fa63ca18248b89f0526188d3aa91,19385.0,conda-forge/napari-generic-simulator/0.0.19/noarch/napari-generic-simulator-0.0.19-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-generic-simulator/0.0.19/noarch/napari-generic-simulator-0.0.19-pyhd8ed1ab_0.conda,conda,0.0.19,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -178,napari-geojson,0.1.3,napari-geojson,Read and write geojson files in napari,Tim Morello,BSD-3-Clause,https://github.com/tdmorello/napari-geojson,61f83989414b5ba20e9959da,['conda'],,https://github.com/tdmorello/napari-geojson,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-geojson,http://api.anaconda.org/packages/conda-forge/napari-geojson,http://anaconda.org/conda-forge/napari-geojson,['0.1.0'],0.1.0,0.1.0,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.0,conda-forge/napari-geojson/0.1.0,1.0,0.0,2022-01-31 19:33:27.545000+00:00,2023-06-18 08:40:40.281000+00:00,conda,noarch/napari-geojson-0.1.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['geojson', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7']",noarch,1643657412618.0,None-any-None,pyhd8ed1ab_0,2022-01-31 19:33:28.010000+00:00,ad75cd00e8d46d76d0f692647077c547,None,11416.0,conda-forge/napari-geojson/0.1.0/noarch/napari-geojson-0.1.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-geojson/0.1.0/noarch/napari-geojson-0.1.0-pyhd8ed1ab_0.tar.bz2,conda,0.1.0,conda-forge,['main'],public,,0.1.0,napari-geojson.get_reader,Open data with napari-geojson,napari_geojson._reader:napari_get_reader,napari-geojson.get_reader,['*.geojson'],True,2.1,napari-geojson,0.1.3,,Read and write geojson files in napari,"# napari-geojson +",text/markdown,https://github.com/Meizhu-Liang/napari-generic-SIMulator,Meizhu Liang,ml2618@ic.ac.uk,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10']","['numpy', 'magicgui', 'qtpy', 'tifffile', 'opt-einsum', 'matplotlib', 'pypcd-imp', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""', 'tifffile; extra == ""testing""', 'pypcd-imp; extra == ""testing""', 'opt-einsum; extra == ""testing""', 'matplotlib; extra == ""testing""']",>=3.8,"['Bug Tracker, https://github.com/Meizhu-Liang/napari-generic-SIMulator/issues', 'Documentation, https://github.com/Meizhu-Liang/napari-generic-SIMulator#README.md', 'Source Code, https://github.com/Meizhu-Liang/napari-generic-SIMulator', 'User Support, https://github.com/Meizhu-Liang/napari-generic-SIMulator/issues']",['testing'],False,0.0.13,conda-forge/napari-generic-simulator/0.0.13,0.0.15,conda-forge/napari-generic-simulator/0.0.15,0.0.18,conda-forge/napari-generic-simulator/0.0.18,conda,noarch/napari-generic-simulator-0.0.13-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'tifffile']",pyhd8ed1ab_0,1660887682074.0,None-any-None,noarch,2022-08-19 05:43:24.568000+00:00,0f5056a891fcaba3f2c8f2ef0973f19b,None,17728.0,conda-forge/napari-generic-simulator/0.0.13/noarch/napari-generic-simulator-0.0.13-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-generic-simulator/0.0.13/noarch/napari-generic-simulator-0.0.13-pyhd8ed1ab_0.tar.bz2,conda,0.0.13,conda-forge,['main'],conda,noarch/napari-generic-simulator-0.0.15-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'tifffile']",noarch,1662501587805.0,None-any-None,pyhd8ed1ab_0,2022-09-06 22:02:13.449000+00:00,f3d518a9916e684659b7c9bc3464acaa,None,16864.0,conda-forge/napari-generic-simulator/0.0.15/noarch/napari-generic-simulator-0.0.15-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-generic-simulator/0.0.15/noarch/napari-generic-simulator-0.0.15-pyhd8ed1ab_0.tar.bz2,conda,0.0.15,conda-forge,['main'],conda,noarch/napari-generic-simulator-0.0.18-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'tifffile']",BSD-3-Clause,python,1663625603292.0,2022-09-19 22:15:33.601000+00:00,c8d404707543352dbe9c3373a2ea7b59,None,16877.0,conda-forge/napari-generic-simulator/0.0.18/noarch/napari-generic-simulator-0.0.18-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-generic-simulator/0.0.18/noarch/napari-generic-simulator-0.0.18-pyhd8ed1ab_0.tar.bz2,conda,0.0.18,conda-forge,['main'],,napari-generic-SIMulator.make_simulator_widget,SIM data generator,napari_generic_simulator._widget:SIMulator,,,,,,,napari-generic-SIMulator.make_pointcloud_widget,Point cloud generator,False,napari-generic-SIMulator.make_simulator_widget,SIM data generator,False,,,,,,,,,,,,,,,,,,,,0.0.19,conda-forge/napari-generic-simulator/0.0.19,,,,,conda,noarch/napari-generic-simulator-0.0.19-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'tifffile']",noarch,1673987713417.0,None-any-None,pyhd8ed1ab_0,2023-01-17 20:36:51.780000+00:00,6c789478efc6208da86ff04f16eaf19e,f481bb8a4cb64c9bae163caed1d4ff6fcaa8fa63ca18248b89f0526188d3aa91,19385.0,conda-forge/napari-generic-simulator/0.0.19/noarch/napari-generic-simulator-0.0.19-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-generic-simulator/0.0.19/noarch/napari-generic-simulator-0.0.19-pyhd8ed1ab_0.conda,conda,0.0.19,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +187,napari-geojson,0.1.3,napari-geojson,Read and write geojson files in napari,Tim Morello,BSD-3-Clause,https://github.com/tdmorello/napari-geojson,61f83989414b5ba20e9959da,['conda'],,https://github.com/tdmorello/napari-geojson,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-geojson,http://api.anaconda.org/packages/conda-forge/napari-geojson,http://anaconda.org/conda-forge/napari-geojson,['0.1.0'],0.1.0,0.1.0,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.0,conda-forge/napari-geojson/0.1.0,1.0,0.0,2022-01-31 19:33:27.545000+00:00,2023-06-18 08:40:40.281000+00:00,conda,noarch/napari-geojson-0.1.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['geojson', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7']",noarch,1643657412618.0,None-any-None,pyhd8ed1ab_0,2022-01-31 19:33:28.010000+00:00,ad75cd00e8d46d76d0f692647077c547,None,11416.0,conda-forge/napari-geojson/0.1.0/noarch/napari-geojson-0.1.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-geojson/0.1.0/noarch/napari-geojson-0.1.0-pyhd8ed1ab_0.tar.bz2,conda,0.1.0,conda-forge,['main'],public,,0.1.0,napari-geojson.get_reader,Open data with napari-geojson,napari_geojson._reader:napari_get_reader,napari-geojson.get_reader,['*.geojson'],True,2.1,napari-geojson,0.1.3,,Read and write geojson files in napari,"# napari-geojson [![License](https://img.shields.io/pypi/l/napari-geojson.svg?color=green)](https://github.com/tdmorello/napari-geojson/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-geojson.svg?color=green)](https://pypi.org/project/napari-geojson) @@ -19359,8 +20266,132 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/tdmorello/napari-geojson,Tim Morello,tdmorello@gmail.com,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['geojson', 'numpy', ""black ; extra == 'dev'"", ""flake8 ; extra == 'dev'"", ""flake8-black ; extra == 'dev'"", ""flake8-docstrings ; extra == 'dev'"", ""flake8-isort ; extra == 'dev'"", ""isort ; extra == 'dev'"", ""mypy ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""pytest ; extra == 'dev'"", ""pytest-cov ; extra == 'dev'"", ""pytest-qt ; extra == 'dev'"", ""tox ; extra == 'dev'"", ""napari[all] ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/tdmorello/napari-geojson/issues', 'Documentation, https://github.com/tdmorello/napari-geojson#README.md', 'Source Code, https://github.com/tdmorello/napari-geojson', 'User Support, https://github.com/tdmorello/napari-geojson/issues']","['dev', 'testing']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-geojson.write_shapes,Save shapes data with napari-geojson,napari_geojson._writer:write_shapes,,,,,,,,,,,,,,,,,,,,,,napari-geojson.write_shapes,"['shapes*', 'points*']",napari geojson,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['.geojson'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -179,napari-griottes,0.4.1,Griottes,Create graphs,Andrey Aristov,BSD-3-Clause,https://github.com/aaristov/napari-griottes,643d72eb452061e687eadd58,['conda'],,https://github.com/aaristov/napari-griottes,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-griottes,http://api.anaconda.org/packages/conda-forge/napari-griottes,http://anaconda.org/conda-forge/napari-griottes,"['0.3.9', '0.4.1']",0.4.1,0.4.1,['noarch'],4.0,,['pyhd8ed1ab_0'],0.3.9,conda-forge/napari-griottes/0.3.9,1.0,0.0,2023-04-17 16:25:13.049000+00:00,2023-06-18 17:28:02.125000+00:00,conda,noarch/napari-griottes-0.3.9-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['griottes', 'napari', 'networkx', 'numpy', 'pandas', 'python >=3.8']",noarch,1681748593750.0,None-any-None,pyhd8ed1ab_0,2023-04-17 16:25:13.701000+00:00,0534bcb1eaedcb731398274fbc602689,fd2e5acae54d9c82f6843fad1ede68294f3f9b1b62d11734fad848e91fb43639,17593.0,conda-forge/napari-griottes/0.3.9/noarch/napari-griottes-0.3.9-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-griottes/0.3.9/noarch/napari-griottes-0.3.9-pyhd8ed1ab_0.conda,conda,0.3.9,conda-forge,['main'],public,,0.2.1,napari-griottes.get_reader,Open data with Griottes,napari_griottes._reader:napari_get_reader,napari-griottes.get_reader,"['*.json', '*.npy', '*.tif', '*.tiff', '*.csv', '*.griottes']",False,2.1,napari-griottes,0.4.1,,Create graphs,"# napari-griottes +",text/markdown,https://github.com/tdmorello/napari-geojson,Tim Morello,tdmorello@gmail.com,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['geojson', 'numpy', ""black ; extra == 'dev'"", ""flake8 ; extra == 'dev'"", ""flake8-black ; extra == 'dev'"", ""flake8-docstrings ; extra == 'dev'"", ""flake8-isort ; extra == 'dev'"", ""isort ; extra == 'dev'"", ""mypy ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""pytest ; extra == 'dev'"", ""pytest-cov ; extra == 'dev'"", ""pytest-qt ; extra == 'dev'"", ""tox ; extra == 'dev'"", ""napari[all] ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/tdmorello/napari-geojson/issues', 'Documentation, https://github.com/tdmorello/napari-geojson#README.md', 'Source Code, https://github.com/tdmorello/napari-geojson', 'User Support, https://github.com/tdmorello/napari-geojson/issues']","['dev', 'testing']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-geojson.write_shapes,Save shapes data with napari-geojson,napari_geojson._writer:write_shapes,,,,,,,,,,,,,,,,,,,,,,napari-geojson.write_shapes,"['shapes*', 'points*']",napari geojson,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['.geojson'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +188,napari-grid-cropping,0.0.1,Grid cropping napari plugin,Create multiple crops of an image in a grid like fashion.,Niklas Breitenbach-Netter," +Copyright (c) 2024, Niklas Breitenbach-Netter +All rights reserved. + +Redistribution and use in source and binary forms, with or without +modification, are permitted provided that the following conditions are met: + +* Redistributions of source code must retain the above copyright notice, this + list of conditions and the following disclaimer. + +* Redistributions in binary form must reproduce the above copyright notice, + this list of conditions and the following disclaimer in the documentation + and/or other materials provided with the distribution. + +* Neither the name of copyright holder nor the names of its + contributors may be used to endorse or promote products derived from + this software without specific prior written permission. + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ""AS IS"" +AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE +IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE +DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE +FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL +DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR +SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER +CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, +OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE +OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. +",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-grid-cropping.make_grid_widget,Make Grid cropping widget,napari_grid_cropping:grid_widget,,,,2.1,napari-grid-cropping,0.0.1,,Create multiple crops of an image in a grid like fashion.,"# napari-grid-cropping + +[![License BSD-3](https://img.shields.io/pypi/l/napari-grid-cropping.svg?color=green)](https://github.com/gatoniel/napari-grid-cropping/raw/main/LICENSE) +[![PyPI](https://img.shields.io/pypi/v/napari-grid-cropping.svg?color=green)](https://pypi.org/project/napari-grid-cropping) +[![Python Version](https://img.shields.io/pypi/pyversions/napari-grid-cropping.svg?color=green)](https://python.org) +[![tests](https://github.com/gatoniel/napari-grid-cropping/workflows/tests/badge.svg)](https://github.com/gatoniel/napari-grid-cropping/actions) +[![codecov](https://codecov.io/gh/gatoniel/napari-grid-cropping/branch/main/graph/badge.svg)](https://codecov.io/gh/gatoniel/napari-grid-cropping) +[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-grid-cropping)](https://napari-hub.org/plugins/napari-grid-cropping) + +Create multiple crops of an image in a grid like fashion. + +---------------------------------- + +This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template. + + + +## Installation + +You can install `napari-grid-cropping` via [pip]: + + pip install napari-grid-cropping + + + +To install latest development version : + + pip install git+https://github.com/gatoniel/napari-grid-cropping.git + + +## Contributing + +Contributions are very welcome. Tests can be run with [tox], please ensure +the coverage at least stays the same before you submit a pull request. + +## License + +Distributed under the terms of the [BSD-3] license, +""napari-grid-cropping"" is free and open source software + +## Issues + +If you encounter any problems, please [file an issue] along with a detailed description. + +[napari]: https://github.com/napari/napari +[Cookiecutter]: https://github.com/audreyr/cookiecutter +[@napari]: https://github.com/napari +[MIT]: http://opensource.org/licenses/MIT +[BSD-3]: http://opensource.org/licenses/BSD-3-Clause +[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt +[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt +[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0 +[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt +[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin + +[file an issue]: https://github.com/gatoniel/napari-grid-cropping/issues + +[napari]: https://github.com/napari/napari +[tox]: https://tox.readthedocs.io/en/latest/ +[pip]: https://pypi.org/project/pip/ +[PyPI]: https://pypi.org/ +",text/markdown,,Niklas Breitenbach-Netter,niknett@gmail.com," +Copyright (c) 2024, Niklas Breitenbach-Netter +All rights reserved. + +Redistribution and use in source and binary forms, with or without +modification, are permitted provided that the following conditions are met: + +* Redistributions of source code must retain the above copyright notice, this + list of conditions and the following disclaimer. + +* Redistributions in binary form must reproduce the above copyright notice, + this list of conditions and the following disclaimer in the documentation + and/or other materials provided with the distribution. + +* Neither the name of copyright holder nor the names of its + contributors may be used to endorse or promote products derived from + this software without specific prior written permission. + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ""AS IS"" +AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE +IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE +DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE +FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL +DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR +SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER +CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, +OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE +OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'qtpy', 'tifffile', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""', 'magicgui; extra == ""testing""']",>=3.9,"['Bug Tracker, https://github.com/gatoniel/napari-grid-cropping/issues', 'Documentation, https://github.com/gatoniel/napari-grid-cropping#README.md', 'Source Code, https://github.com/gatoniel/napari-grid-cropping', 'User Support, https://github.com/gatoniel/napari-grid-cropping/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",napari-grid-cropping.make_label_widget,Make Label annotation widget,napari_grid_cropping:label_widget,,,,,,,napari-grid-cropping.make_grid_widget,Grid cropping,True,napari-grid-cropping.make_label_widget,Create label annotations,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +189,napari-griottes,0.4.1,Griottes,Create graphs,Andrey Aristov,BSD-3-Clause,https://github.com/aaristov/napari-griottes,643d72eb452061e687eadd58,['conda'],,https://github.com/aaristov/napari-griottes,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-griottes,http://api.anaconda.org/packages/conda-forge/napari-griottes,http://anaconda.org/conda-forge/napari-griottes,"['0.3.9', '0.4.1']",0.4.1,0.4.1,['noarch'],4.0,,['pyhd8ed1ab_0'],0.3.9,conda-forge/napari-griottes/0.3.9,1.0,0.0,2023-04-17 16:25:13.049000+00:00,2023-06-18 17:28:02.125000+00:00,conda,noarch/napari-griottes-0.3.9-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['griottes', 'napari', 'networkx', 'numpy', 'pandas', 'python >=3.8']",noarch,1681748593750.0,None-any-None,pyhd8ed1ab_0,2023-04-17 16:25:13.701000+00:00,0534bcb1eaedcb731398274fbc602689,fd2e5acae54d9c82f6843fad1ede68294f3f9b1b62d11734fad848e91fb43639,17593.0,conda-forge/napari-griottes/0.3.9/noarch/napari-griottes-0.3.9-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-griottes/0.3.9/noarch/napari-griottes-0.3.9-pyhd8ed1ab_0.conda,conda,0.3.9,conda-forge,['main'],public,,0.2.1,napari-griottes.get_reader,Open data with Griottes,napari_griottes._reader:napari_get_reader,napari-griottes.get_reader,"['*.json', '*.npy', '*.tif', '*.tiff', '*.csv', '*.griottes']",False,2.1,napari-griottes,0.4.1,,Create graphs,"# napari-griottes [![License](https://img.shields.io/pypi/l/napari-griottes.svg?color=green)](https://github.com/BaroudLab/napari-griottes/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-griottes.svg?color=green)](https://pypi.org/project/napari-griottes) @@ -19485,8 +20516,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/aaristov/napari-griottes,Andrey Aristov,aaristov@pasteur.fr,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['griottes', 'networkx', 'numpy', 'pandas (<2)']",>=3.8,"['Bug Tracker, https://github.com/aaristov/napari-griottes/issues', 'Documentation, https://github.com/aaristov/napari-griottes#README.md', 'Source Code, https://github.com/aaristov/napari-griottes', 'User Support, https://github.com/aaristov/napari-griottes/issues']",,False,0.4.1,conda-forge/napari-griottes/0.4.1,,,,,conda,noarch/napari-griottes-0.4.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['griottes', 'napari', 'networkx', 'numpy', 'pandas <2.0.0a0', 'python >=3.8']",pyhd8ed1ab_0,1682325135627.0,None-any-None,noarch,2023-04-24 08:34:48.758000+00:00,e4a3dcf8479041c9023f3fbeed8998dd,c14b8f677a4f2e701369e5e53c73150d6474ec188b36269899beef17cfb9a5d3,17999.0,conda-forge/napari-griottes/0.4.1/noarch/napari-griottes-0.4.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-griottes/0.4.1/noarch/napari-griottes-0.4.1-pyhd8ed1ab_0.conda,conda,0.4.1,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-griottes.save_graph,Save graph with Griottes,napari_griottes._writer:save_graph_to_json,napari-griottes.save_graph_widget,Save graph,napari_griottes._widget:save_graph,napari-griottes.make_zebrafish_data,Load zebrafish sample data from Griottes,napari_griottes._sample_data:make_zebrafish_data,napari-griottes.make_graph,Make graph,False,napari-griottes.save_graph_widget,Save graph,False,,,,,,,napari-griottes.make_cell_properties,Load zebrafish cell properties Griottes,napari_griottes._sample_data:make_cell_properties,napari-griottes.save_graph,"['shapes', 'vectors']",,,,,,napari-griottes.make_cell_properties,csv,Cell properties table 3D,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-griottes.make_zebrafish_data,zebra,Zebrafish 2D with labels,napari-griottes.make_graph,Make graph,napari_griottes._widget:make_graph,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['.json'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -180,napari-gruvbox,0.1.1,napari Gruvbox,Gruvbox theme for napari.,Lorenzo Gaifas,GPL-3.0-only,https://github.com/brisvag/napari-gruvbox,642dfad712ab8ac4c62d1383,['conda'],,https://github.com/brisvag/napari-gruvbox,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-gruvbox,http://api.anaconda.org/packages/conda-forge/napari-gruvbox,http://anaconda.org/conda-forge/napari-gruvbox,"['0.1.0', '0.1.1']",0.1.1,0.1.1,['noarch'],4.0,,['pyhd8ed1ab_0'],0.1.0,conda-forge/napari-gruvbox/0.1.0,1.0,0.0,2023-04-05 22:48:52.546000+00:00,2023-06-18 17:27:57.854000+00:00,conda,noarch/napari-gruvbox-0.1.0-pyhd8ed1ab_0.conda,0.0,GPL-3.0-only,False,python,['python >=3.8'],noarch,1680734873695.0,None-any-None,pyhd8ed1ab_0,2023-04-05 22:48:53.147000+00:00,12e14633e08271425de83b90e7aaeab6,648c8803175c25d7b522385eac11df420325c745bac61934b4bada6bfaa184e7,21105.0,conda-forge/napari-gruvbox/0.1.0/noarch/napari-gruvbox-0.1.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-gruvbox/0.1.0/noarch/napari-gruvbox-0.1.0-pyhd8ed1ab_0.conda,conda,0.1.0,conda-forge,['main'],public,,0.2.1,,,,,,,2.1,napari-gruvbox,0.1.1,,Gruvbox theme for napari.,"# napari-gruvbox +",text/markdown,https://github.com/aaristov/napari-griottes,Andrey Aristov,aaristov@pasteur.fr,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['griottes', 'networkx', 'numpy', 'pandas (<2)']",>=3.8,"['Bug Tracker, https://github.com/aaristov/napari-griottes/issues', 'Documentation, https://github.com/aaristov/napari-griottes#README.md', 'Source Code, https://github.com/aaristov/napari-griottes', 'User Support, https://github.com/aaristov/napari-griottes/issues']",,False,0.4.1,conda-forge/napari-griottes/0.4.1,,,,,conda,noarch/napari-griottes-0.4.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['griottes', 'napari', 'networkx', 'numpy', 'pandas <2.0.0a0', 'python >=3.8']",pyhd8ed1ab_0,1682325135627.0,None-any-None,noarch,2023-04-24 08:34:48.758000+00:00,e4a3dcf8479041c9023f3fbeed8998dd,c14b8f677a4f2e701369e5e53c73150d6474ec188b36269899beef17cfb9a5d3,17999.0,conda-forge/napari-griottes/0.4.1/noarch/napari-griottes-0.4.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-griottes/0.4.1/noarch/napari-griottes-0.4.1-pyhd8ed1ab_0.conda,conda,0.4.1,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-griottes.save_graph,Save graph with Griottes,napari_griottes._writer:save_graph_to_json,napari-griottes.save_graph_widget,Save graph,napari_griottes._widget:save_graph,napari-griottes.make_zebrafish_data,Load zebrafish sample data from Griottes,napari_griottes._sample_data:make_zebrafish_data,napari-griottes.make_graph,Make graph,False,napari-griottes.save_graph_widget,Save graph,False,,,,,,,napari-griottes.make_cell_properties,Load zebrafish cell properties Griottes,napari_griottes._sample_data:make_cell_properties,napari-griottes.save_graph,"['shapes', 'vectors']",,,,,,napari-griottes.make_cell_properties,csv,Cell properties table 3D,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-griottes.make_zebrafish_data,zebra,Zebrafish 2D with labels,napari-griottes.make_graph,Make graph,napari_griottes._widget:make_graph,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['.json'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +190,napari-gruvbox,0.1.1,napari Gruvbox,Gruvbox theme for napari.,Lorenzo Gaifas,GPL-3.0-only,https://github.com/brisvag/napari-gruvbox,642dfad712ab8ac4c62d1383,['conda'],,https://github.com/brisvag/napari-gruvbox,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-gruvbox,http://api.anaconda.org/packages/conda-forge/napari-gruvbox,http://anaconda.org/conda-forge/napari-gruvbox,"['0.1.0', '0.1.1']",0.1.1,0.1.1,['noarch'],4.0,,['pyhd8ed1ab_0'],0.1.0,conda-forge/napari-gruvbox/0.1.0,1.0,0.0,2023-04-05 22:48:52.546000+00:00,2023-06-18 17:27:57.854000+00:00,conda,noarch/napari-gruvbox-0.1.0-pyhd8ed1ab_0.conda,0.0,GPL-3.0-only,False,python,['python >=3.8'],noarch,1680734873695.0,None-any-None,pyhd8ed1ab_0,2023-04-05 22:48:53.147000+00:00,12e14633e08271425de83b90e7aaeab6,648c8803175c25d7b522385eac11df420325c745bac61934b4bada6bfaa184e7,21105.0,conda-forge/napari-gruvbox/0.1.0/noarch/napari-gruvbox-0.1.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-gruvbox/0.1.0/noarch/napari-gruvbox-0.1.0-pyhd8ed1ab_0.conda,conda,0.1.0,conda-forge,['main'],public,,0.2.1,,,,,,,2.1,napari-gruvbox,0.1.1,,Gruvbox theme for napari.,"# napari-gruvbox [![License GNU GPL v3.0](https://img.shields.io/pypi/l/napari-gruvbox.svg?color=green)](https://github.com/brisvag/napari-gruvbox/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-gruvbox.svg?color=green)](https://pypi.org/project/napari-gruvbox) @@ -19553,8 +20584,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/brisvag/napari-gruvbox,Lorenzo Gaifas,brisvag@gmail.com,GPL-3.0-only,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']",['pygments (>=2.9)'],>=3.8,"['Bug Tracker, https://github.com/brisvag/napari-gruvbox/issues', 'Documentation, https://github.com/brisvag/napari-gruvbox#README.md', 'Source Code, https://github.com/brisvag/napari-gruvbox', 'User Support, https://github.com/brisvag/napari-gruvbox/issues']",,False,0.1.1,conda-forge/napari-gruvbox/0.1.1,,,,,conda,noarch/napari-gruvbox-0.1.1-pyhd8ed1ab_0.conda,0.0,GPL-3.0-only,False,python,"['pygments >=2.9', 'python >=3.8']",pyhd8ed1ab_0,1682254658051.0,None-any-None,noarch,2023-04-23 12:58:36.047000+00:00,72b779a8866c913194dda1fbbdf59ce0,48623b4d90e0608f7dfd813d417996797ddaab01cd6d37418a6d6c0780c09348,21316.0,conda-forge/napari-gruvbox/0.1.1/noarch/napari-gruvbox-0.1.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-gruvbox/0.1.1/noarch/napari-gruvbox-0.1.1-pyhd8ed1ab_0.conda,conda,0.1.1,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -181,napari-h5,0.0.8,napari-h5,A hdf5 file reader plugin for napari,Luis Perdigao,Apache-2.0,https://github.com/rosalindfranklininstitute/napari-h5,653e936f5139c4f621c67195,['conda'],,https://pypi.org/project/napari-h5,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-h5,http://api.anaconda.org/packages/conda-forge/napari-h5,http://anaconda.org/conda-forge/napari-h5,"['0.0.7', '0.0.8']",0.0.8,0.0.8,['noarch'],7.0,https://github.com/rosalindfranklininstitute/napari-h5,['pyhd8ed1ab_0'],0.0.7,conda-forge/napari-h5/0.0.7,1.0,0.0,2023-10-29 17:16:28.901000+00:00,2024-07-11 10:28:03.845000+00:00,conda,noarch/napari-h5-0.0.7-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['h5py', 'numpy', 'python >=3.8']",noarch,1698599719335.0,None-any-None,pyhd8ed1ab_0,2023-10-29 17:16:29.353000+00:00,8dcd538f81863349d8f299c1e8df5f07,18866f20c126216c1481132296a3baa2c1633d2402e9987051a4d632367245de,16468.0,conda-forge/napari-h5/0.0.7/noarch/napari-h5-0.0.7-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-h5/0.0.7/noarch/napari-h5-0.0.7-pyhd8ed1ab_0.conda,conda,0.0.7,conda-forge,['main'],public,,0.2.1,napari-h5.get_reader,Open data with open h5 files,napari_h5._reader:get_reader,napari-h5.get_reader,['*.h5'],False,2.1,napari-h5,0.0.8,,A hdf5 file reader plugin for napari,"# napari-h5 +",text/markdown,https://github.com/brisvag/napari-gruvbox,Lorenzo Gaifas,brisvag@gmail.com,GPL-3.0-only,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']",['pygments (>=2.9)'],>=3.8,"['Bug Tracker, https://github.com/brisvag/napari-gruvbox/issues', 'Documentation, https://github.com/brisvag/napari-gruvbox#README.md', 'Source Code, https://github.com/brisvag/napari-gruvbox', 'User Support, https://github.com/brisvag/napari-gruvbox/issues']",,False,0.1.1,conda-forge/napari-gruvbox/0.1.1,,,,,conda,noarch/napari-gruvbox-0.1.1-pyhd8ed1ab_0.conda,0.0,GPL-3.0-only,False,python,"['pygments >=2.9', 'python >=3.8']",pyhd8ed1ab_0,1682254658051.0,None-any-None,noarch,2023-04-23 12:58:36.047000+00:00,72b779a8866c913194dda1fbbdf59ce0,48623b4d90e0608f7dfd813d417996797ddaab01cd6d37418a6d6c0780c09348,21316.0,conda-forge/napari-gruvbox/0.1.1/noarch/napari-gruvbox-0.1.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-gruvbox/0.1.1/noarch/napari-gruvbox-0.1.1-pyhd8ed1ab_0.conda,conda,0.1.1,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +191,napari-h5,0.0.8,napari-h5,A hdf5 file reader plugin for napari,Luis Perdigao,Apache-2.0,https://github.com/rosalindfranklininstitute/napari-h5,653e936f5139c4f621c67195,['conda'],,https://pypi.org/project/napari-h5,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-h5,http://api.anaconda.org/packages/conda-forge/napari-h5,http://anaconda.org/conda-forge/napari-h5,"['0.0.7', '0.0.8']",0.0.8,0.0.8,['noarch'],7.0,https://github.com/rosalindfranklininstitute/napari-h5,['pyhd8ed1ab_0'],0.0.7,conda-forge/napari-h5/0.0.7,1.0,0.0,2023-10-29 17:16:28.901000+00:00,2024-07-11 10:28:03.845000+00:00,conda,noarch/napari-h5-0.0.7-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['h5py', 'numpy', 'python >=3.8']",noarch,1698599719335.0,None-any-None,pyhd8ed1ab_0,2023-10-29 17:16:29.353000+00:00,8dcd538f81863349d8f299c1e8df5f07,18866f20c126216c1481132296a3baa2c1633d2402e9987051a4d632367245de,16468.0,conda-forge/napari-h5/0.0.7/noarch/napari-h5-0.0.7-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-h5/0.0.7/noarch/napari-h5-0.0.7-pyhd8ed1ab_0.conda,conda,0.0.7,conda-forge,['main'],public,,0.2.1,napari-h5.get_reader,Open data with open h5 files,napari_h5._reader:get_reader,napari-h5.get_reader,['*.h5'],False,2.1,napari-h5,0.0.8,,A hdf5 file reader plugin for napari,"# napari-h5 [![License Apache Software License 2.0](https://img.shields.io/pypi/l/napari-h5.svg?color=green)](https://github.com/rosalindfranklininstitute/napari-h5/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-h5.svg?color=green)](https://pypi.org/project/napari-h5) @@ -19623,8 +20654,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/rosalindfranklininstitute/napari-h5,Luis Perdigao,luis.perdigao@rfi.ac.uk,Apache-2.0,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'h5py', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/rosalindfranklininstitute/napari-h5/issues', 'Documentation, https://github.com/rosalindfranklininstitute/napari-h5#readme', 'Source Code, https://github.com/rosalindfranklininstitute/napari-h5', 'User Support, https://github.com/rosalindfranklininstitute/napari-h5/issues']",['testing'],False,0.0.8,conda-forge/napari-h5/0.0.8,,,,,conda,noarch/napari-h5-0.0.8-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['dask-core', 'h5py', 'numpy', 'python >=3.8']",pyhd8ed1ab_0,1720693559768.0,None-any-None,noarch,2024-07-11 10:27:11.797000+00:00,4da661841c1d3ed65bec59b9dfebd575,27340f9e26b28abd0eecf00b7130d7dd60b849e59f8270615a08686bd351e5c1,16525.0,conda-forge/napari-h5/0.0.8/noarch/napari-h5-0.0.8-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-h5/0.0.8/noarch/napari-h5-0.0.8-pyhd8ed1ab_0.conda,conda,0.0.8,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-h5.multi_layer_writer,Save multi-layer data with open h5 files,napari_h5._writer:multi_layer_writer,napari-h5.single_layer_writer,Save image data with open h5 files,napari_h5._writer:single_layer_writer,,,,,,,,,,,,,,,,,,,napari-h5.multi_layer_writer,"['image*', 'labels*']",,napari-h5.single_layer_writer,"['image', 'labels']",['.h5'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['.h5'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -182,napari-hdf5-labels-io,0.3.dev16,napari-hdf5-labels-io,Napari plugin to store set of layers in a .h5 file. Label layer are stored in a sparse representation.,"Duway Nicolas Lesmes Leon, Pranjal Dhole",GNU GPL v3.0,https://github.com/yapic/napari-hdf5-labels-io,62162feb41ba87b014ba0fe9,['conda'],,https://github.com/yapic/napari-hdf5-labels-io,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-hdf5-labels-io,http://api.anaconda.org/packages/conda-forge/napari-hdf5-labels-io,http://anaconda.org/conda-forge/napari-hdf5-labels-io,['0.3.dev16'],0.3.dev16,0.3.dev16,['noarch'],3.0,,['pyhd8ed1ab_0'],0.3.dev16,conda-forge/napari-hdf5-labels-io/0.3.dev16,1.0,0.0,2022-02-23 13:00:24.754000+00:00,2023-06-18 08:40:55.524000+00:00,conda,noarch/napari-hdf5-labels-io-0.3.dev16-pyhd8ed1ab_0.tar.bz2,0.0,GPL-3.0-only,False,python,"['h5py >=2.10.0', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.6,<3.9', 'sparse', 'zarr']",noarch,1645621184953.0,None-any-None,pyhd8ed1ab_0,2022-02-23 13:00:25.745000+00:00,5a63825ce03b9e8ef81060fda729208b,None,25043.0,conda-forge/napari-hdf5-labels-io/0.3.dev16/noarch/napari-hdf5-labels-io-0.3.dev16-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-hdf5-labels-io/0.3.dev16/noarch/napari-hdf5-labels-io-0.3.dev16-pyhd8ed1ab_0.tar.bz2,conda,0.3.dev16,conda-forge,['main'],public,,0.2.1,napari-hdf5-labels-io.napari_write_image,napari_write_image,napari_hdf5_labels_io._writer:napari_write_image,napari-hdf5-labels-io.h5_to_napari,['*'],True,2.1,napari-hdf5-labels-io,0.3.dev16,['UNKNOWN'],Napari plugin to store set of layers in a .h5 file. Label layer are stored in a sparse representation.,"# napari-hdf5-labels-io +",text/markdown,https://github.com/rosalindfranklininstitute/napari-h5,Luis Perdigao,luis.perdigao@rfi.ac.uk,Apache-2.0,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'h5py', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/rosalindfranklininstitute/napari-h5/issues', 'Documentation, https://github.com/rosalindfranklininstitute/napari-h5#readme', 'Source Code, https://github.com/rosalindfranklininstitute/napari-h5', 'User Support, https://github.com/rosalindfranklininstitute/napari-h5/issues']",['testing'],False,0.0.8,conda-forge/napari-h5/0.0.8,,,,,conda,noarch/napari-h5-0.0.8-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['dask-core', 'h5py', 'numpy', 'python >=3.8']",pyhd8ed1ab_0,1720693559768.0,None-any-None,noarch,2024-07-11 10:27:11.797000+00:00,4da661841c1d3ed65bec59b9dfebd575,27340f9e26b28abd0eecf00b7130d7dd60b849e59f8270615a08686bd351e5c1,16525.0,conda-forge/napari-h5/0.0.8/noarch/napari-h5-0.0.8-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-h5/0.0.8/noarch/napari-h5-0.0.8-pyhd8ed1ab_0.conda,conda,0.0.8,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-h5.multi_layer_writer,Save multi-layer data with open h5 files,napari_h5._writer:multi_layer_writer,napari-h5.single_layer_writer,Save image data with open h5 files,napari_h5._writer:single_layer_writer,,,,,,,,,,,,,,,,,,,napari-h5.multi_layer_writer,"['image*', 'labels*']",,napari-h5.single_layer_writer,"['image', 'labels']",['.h5'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['.h5'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +192,napari-hdf5-labels-io,0.3.dev16,napari-hdf5-labels-io,Napari plugin to store set of layers in a .h5 file. Label layer are stored in a sparse representation.,"Duway Nicolas Lesmes Leon, Pranjal Dhole",GNU GPL v3.0,https://github.com/yapic/napari-hdf5-labels-io,62162feb41ba87b014ba0fe9,['conda'],,https://github.com/yapic/napari-hdf5-labels-io,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-hdf5-labels-io,http://api.anaconda.org/packages/conda-forge/napari-hdf5-labels-io,http://anaconda.org/conda-forge/napari-hdf5-labels-io,['0.3.dev16'],0.3.dev16,0.3.dev16,['noarch'],3.0,,['pyhd8ed1ab_0'],0.3.dev16,conda-forge/napari-hdf5-labels-io/0.3.dev16,1.0,0.0,2022-02-23 13:00:24.754000+00:00,2023-06-18 08:40:55.524000+00:00,conda,noarch/napari-hdf5-labels-io-0.3.dev16-pyhd8ed1ab_0.tar.bz2,0.0,GPL-3.0-only,False,python,"['h5py >=2.10.0', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.6,<3.9', 'sparse', 'zarr']",noarch,1645621184953.0,None-any-None,pyhd8ed1ab_0,2022-02-23 13:00:25.745000+00:00,5a63825ce03b9e8ef81060fda729208b,None,25043.0,conda-forge/napari-hdf5-labels-io/0.3.dev16/noarch/napari-hdf5-labels-io-0.3.dev16-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-hdf5-labels-io/0.3.dev16/noarch/napari-hdf5-labels-io-0.3.dev16-pyhd8ed1ab_0.tar.bz2,conda,0.3.dev16,conda-forge,['main'],public,,0.2.1,napari-hdf5-labels-io.napari_write_image,napari_write_image,napari_hdf5_labels_io._writer:napari_write_image,napari-hdf5-labels-io.h5_to_napari,['*'],True,2.1,napari-hdf5-labels-io,0.3.dev16,['UNKNOWN'],Napari plugin to store set of layers in a .h5 file. Label layer are stored in a sparse representation.,"# napari-hdf5-labels-io [![License](https://img.shields.io/pypi/l/napari-hdf5-labels-io.svg?color=green)](https://github.com/yapic/napari-hdf5-labels-io/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-hdf5-labels-io.svg?color=green)](https://pypi.org/project/napari-hdf5-labels-io) @@ -19695,8 +20726,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/yapic/napari-hdf5-labels-io,"Duway Nicolas Lesmes Leon, Pranjal Dhole","dlesmesleon@hotmail.com, dhole.pranjal@gmail.com",GNU GPL v3.0,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']","['napari-plugin-engine (>=0.1.4)', 'typing', 'numpy', 'sparse', 'h5py (==2.10.0)', 'zarr']",<3.9,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-hdf5-labels-io.napari_write_labels,napari_write_labels,napari_hdf5_labels_io._writer:napari_write_labels,napari-hdf5-labels-io.napari_write_points,napari_write_points,napari_hdf5_labels_io._writer:napari_write_points,,,,,,,,,,,,,,,,,,,napari-hdf5-labels-io.napari_write_image,['image'],image,napari-hdf5-labels-io.napari_write_labels,['labels'],,labels,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -183,napari-help,0.1.0,napari Help,Helpful tooltips for napari.,Lorenzo Gaifas,GPL-3.0,https://github.com/brisvag/napari-help,62fe08c4f12c4ea79e233310,['conda'],,https://github.com/brisvag/napari-help,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-help,http://api.anaconda.org/packages/conda-forge/napari-help,http://anaconda.org/conda-forge/napari-help,['0.1.0'],0.1.0,0.1.0,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.0,conda-forge/napari-help/0.1.0,1.0,0.0,2022-08-18 09:39:13.472000+00:00,2023-06-18 08:42:20.486000+00:00,conda,noarch/napari-help-0.1.0-pyhd8ed1ab_0.tar.bz2,0.0,GPL-3.0-only,False,python,"['napari', 'python >=3.8', 'qtpy']",noarch,1660815395751.0,None-any-None,pyhd8ed1ab_0,2022-08-18 09:39:13.948000+00:00,6f949886dd4dc1213a07b4ef2b9b1258,9289d976a04bebcb92e355593b2db74d3d7942258d8436b0a70c13a29c3aaac0,22860.0,conda-forge/napari-help/0.1.0/noarch/napari-help-0.1.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-help/0.1.0/noarch/napari-help-0.1.0-pyhd8ed1ab_0.tar.bz2,conda,0.1.0,conda-forge,['main'],public,,0.2.1,napari-help.help_widget,Make help widget,napari_help._widget:HelpWidget,,,,2.1,napari-help,0.1.0,,Helpful tooltips for napari.,"# napari-help +",text/markdown,https://github.com/yapic/napari-hdf5-labels-io,"Duway Nicolas Lesmes Leon, Pranjal Dhole","dlesmesleon@hotmail.com, dhole.pranjal@gmail.com",GNU GPL v3.0,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']","['napari-plugin-engine (>=0.1.4)', 'typing', 'numpy', 'sparse', 'h5py (==2.10.0)', 'zarr']",<3.9,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-hdf5-labels-io.napari_write_labels,napari_write_labels,napari_hdf5_labels_io._writer:napari_write_labels,napari-hdf5-labels-io.napari_write_points,napari_write_points,napari_hdf5_labels_io._writer:napari_write_points,,,,,,,,,,,,,,,,,,,napari-hdf5-labels-io.napari_write_image,['image'],image,napari-hdf5-labels-io.napari_write_labels,['labels'],,labels,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +193,napari-help,0.1.0,napari Help,Helpful tooltips for napari.,Lorenzo Gaifas,GPL-3.0,https://github.com/brisvag/napari-help,62fe08c4f12c4ea79e233310,['conda'],,https://github.com/brisvag/napari-help,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-help,http://api.anaconda.org/packages/conda-forge/napari-help,http://anaconda.org/conda-forge/napari-help,['0.1.0'],0.1.0,0.1.0,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.0,conda-forge/napari-help/0.1.0,1.0,0.0,2022-08-18 09:39:13.472000+00:00,2023-06-18 08:42:20.486000+00:00,conda,noarch/napari-help-0.1.0-pyhd8ed1ab_0.tar.bz2,0.0,GPL-3.0-only,False,python,"['napari', 'python >=3.8', 'qtpy']",noarch,1660815395751.0,None-any-None,pyhd8ed1ab_0,2022-08-18 09:39:13.948000+00:00,6f949886dd4dc1213a07b4ef2b9b1258,9289d976a04bebcb92e355593b2db74d3d7942258d8436b0a70c13a29c3aaac0,22860.0,conda-forge/napari-help/0.1.0/noarch/napari-help-0.1.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-help/0.1.0/noarch/napari-help-0.1.0-pyhd8ed1ab_0.tar.bz2,conda,0.1.0,conda-forge,['main'],public,,0.2.1,napari-help.help_widget,Make help widget,napari_help._widget:HelpWidget,,,,2.1,napari-help,0.1.0,,Helpful tooltips for napari.,"# napari-help [![License GNU GPL v3.0](https://img.shields.io/pypi/l/napari-help.svg?color=green)](https://github.com/brisvag/napari-help/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-help.svg?color=green)](https://pypi.org/project/napari-help) @@ -19763,8 +20794,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/brisvag/napari-help,Lorenzo Gaifas,brisvag@gmail.com,GPL-3.0,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['napari', 'qtpy', ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/brisvag/napari-help/issues', 'Documentation, https://github.com/brisvag/napari-help#README.md', 'Source Code, https://github.com/brisvag/napari-help', 'User Support, https://github.com/brisvag/napari-help/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-help.help_widget,Help Widget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -184,napari-hierarchical,0.1.0,napari-hierarchical,Hierarchical file format support for napari,Jonas Windhager,MIT,https://github.com/BodenmillerGroup/napari-hierarchical,643da610408967d7b0e3a27a,['conda'],,https://github.com/BodenmillerGroup/napari-hierarchical,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-hierarchical,http://api.anaconda.org/packages/conda-forge/napari-hierarchical,http://anaconda.org/conda-forge/napari-hierarchical,['0.1.0'],0.1.0,0.1.0,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.0,conda-forge/napari-hierarchical/0.1.0,1.0,0.0,2023-04-17 20:03:26.232000+00:00,2023-06-18 17:28:02.272000+00:00,conda,noarch/napari-hierarchical-0.1.0-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['napari >=0.4.17', 'pluggy', 'python >=3.8,<3.11', 'qtpy']",noarch,1681761689141.0,None-any-None,pyhd8ed1ab_0,2023-04-17 20:03:26.537000+00:00,4cbf7cc174f9d283feccd6dba4a5a122,a2684d9384e6dbd4b9f948f3c9ac0407a9e8838dcdef215b8515068bc52114bb,35527.0,conda-forge/napari-hierarchical/0.1.0/noarch/napari-hierarchical-0.1.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-hierarchical/0.1.0/noarch/napari-hierarchical-0.1.0-pyhd8ed1ab_0.conda,conda,0.1.0,conda-forge,['main'],public,,0.2.1,napari-hierarchical.get_reader,Open data with napari-hierarchical,napari_hierarchical:napari_get_reader,napari-hierarchical.get_reader,['*'],False,2.1,napari-hierarchical,0.1.0,,Hierarchical file format support for napari,"# napari-hierarchical +",text/markdown,https://github.com/brisvag/napari-help,Lorenzo Gaifas,brisvag@gmail.com,GPL-3.0,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['napari', 'qtpy', ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/brisvag/napari-help/issues', 'Documentation, https://github.com/brisvag/napari-help#README.md', 'Source Code, https://github.com/brisvag/napari-help', 'User Support, https://github.com/brisvag/napari-help/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-help.help_widget,Help Widget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +194,napari-hierarchical,0.1.0,napari-hierarchical,Hierarchical file format support for napari,Jonas Windhager,MIT,https://github.com/BodenmillerGroup/napari-hierarchical,643da610408967d7b0e3a27a,['conda'],,https://github.com/BodenmillerGroup/napari-hierarchical,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-hierarchical,http://api.anaconda.org/packages/conda-forge/napari-hierarchical,http://anaconda.org/conda-forge/napari-hierarchical,['0.1.0'],0.1.0,0.1.0,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.0,conda-forge/napari-hierarchical/0.1.0,1.0,0.0,2023-04-17 20:03:26.232000+00:00,2023-06-18 17:28:02.272000+00:00,conda,noarch/napari-hierarchical-0.1.0-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['napari >=0.4.17', 'pluggy', 'python >=3.8,<3.11', 'qtpy']",noarch,1681761689141.0,None-any-None,pyhd8ed1ab_0,2023-04-17 20:03:26.537000+00:00,4cbf7cc174f9d283feccd6dba4a5a122,a2684d9384e6dbd4b9f948f3c9ac0407a9e8838dcdef215b8515068bc52114bb,35527.0,conda-forge/napari-hierarchical/0.1.0/noarch/napari-hierarchical-0.1.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-hierarchical/0.1.0/noarch/napari-hierarchical-0.1.0-pyhd8ed1ab_0.conda,conda,0.1.0,conda-forge,['main'],public,,0.2.1,napari-hierarchical.get_reader,Open data with napari-hierarchical,napari_hierarchical:napari_get_reader,napari-hierarchical.get_reader,['*'],False,2.1,napari-hierarchical,0.1.0,,Hierarchical file format support for napari,"# napari-hierarchical [![License MIT](https://img.shields.io/pypi/l/napari-hierarchical.svg?color=green)](https://github.com/BodenmillerGroup/napari-hierarchical/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-hierarchical.svg?color=green)](https://pypi.org/project/napari-hierarchical) @@ -19833,8 +20864,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/BodenmillerGroup/napari-hierarchical,Jonas Windhager,jonas.windhager@uzh.ch,MIT,"['Framework :: napari', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['napari (<0.4.18,>=0.4.17)', 'pluggy', 'qtpy', ""dask ; extra == 'all'"", ""h5py ; extra == 'all'"", ""readimc ; extra == 'all'"", ""s3fs ; extra == 'all'"", ""zarr ; extra == 'all'"", ""dask ; extra == 'hdf5'"", ""h5py ; extra == 'hdf5'"", ""dask ; extra == 'imc'"", ""readimc ; extra == 'imc'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""dask ; extra == 'zarr'"", ""s3fs ; extra == 'zarr'"", ""zarr ; extra == 'zarr'""]","<3.11,>=3.8","['Bug Tracker, https://github.com/BodenmillerGroup/napari-hierarchical/issues', 'Documentation, https://github.com/BodenmillerGroup/napari-hierarchical#README.md', 'Source Code, https://github.com/BodenmillerGroup/napari-hierarchical', 'User Support, https://github.com/BodenmillerGroup/napari-hierarchical/issues']","['all', 'hdf5', 'imc', 'testing', 'zarr']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-hierarchical.make_groups_widget,Make napari-hierarchical groups widget,napari_hierarchical.widgets:QGroupsWidget,napari-hierarchical.make_arrays_widget,Make napari-hierarchical arrays widget,napari_hierarchical.widgets:QArraysWidget,napari-hierarchical.sample_data.imc_mock,Make IMC mock sample data,napari_hierarchical.sample_data.imc_mock:make_sample_data,napari-hierarchical.make_groups_widget,Groups,False,napari-hierarchical.make_arrays_widget,Arrays,False,,,,,,,napari-hierarchical.sample_data.idr0052A,Make idr0052A sample data,napari_hierarchical.sample_data.idr0052A:make_sample_data,,,,,,,,napari-hierarchical.sample_data.imc_mock,imc_mock,"IMC mock data (Bodenmiller group, University of Zurich)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-hierarchical.sample_data.idr0052A,idr0052A,"3D confocal time-lapse imaging of human condensins (Walther et al., 2018)",napari-hierarchical.sample_data.pollen,Make pollen sample data,napari_hierarchical.sample_data.pollen:make_sample_data,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-hierarchical.sample_data.pollen,pollen,"3D confocal imaging of a pollen grain (Computer Vision Group, University of Freiburg)" -185,napari-hippo,0.2.0,Hippo,A fat and clumsy collection of hyperspectral tools,Sam Thiele,MIT,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-hippo.get_ENVI_reader,Open ENVI format hyperspectral data,napari_hippo._reader:napari_get_ENVI_reader,napari-hippo.get_ENVI_reader,"['*.hdr', '*.dat', '*.png', '*.jpg', '*.jpeg', '*.bmp']",False,2.1,napari-hippo,0.2.0,,A fat and clumsy collection of hyperspectral tools,"# napari-hippo +",text/markdown,https://github.com/BodenmillerGroup/napari-hierarchical,Jonas Windhager,jonas.windhager@uzh.ch,MIT,"['Framework :: napari', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['napari (<0.4.18,>=0.4.17)', 'pluggy', 'qtpy', ""dask ; extra == 'all'"", ""h5py ; extra == 'all'"", ""readimc ; extra == 'all'"", ""s3fs ; extra == 'all'"", ""zarr ; extra == 'all'"", ""dask ; extra == 'hdf5'"", ""h5py ; extra == 'hdf5'"", ""dask ; extra == 'imc'"", ""readimc ; extra == 'imc'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""dask ; extra == 'zarr'"", ""s3fs ; extra == 'zarr'"", ""zarr ; extra == 'zarr'""]","<3.11,>=3.8","['Bug Tracker, https://github.com/BodenmillerGroup/napari-hierarchical/issues', 'Documentation, https://github.com/BodenmillerGroup/napari-hierarchical#README.md', 'Source Code, https://github.com/BodenmillerGroup/napari-hierarchical', 'User Support, https://github.com/BodenmillerGroup/napari-hierarchical/issues']","['all', 'hdf5', 'imc', 'testing', 'zarr']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-hierarchical.make_groups_widget,Make napari-hierarchical groups widget,napari_hierarchical.widgets:QGroupsWidget,napari-hierarchical.make_arrays_widget,Make napari-hierarchical arrays widget,napari_hierarchical.widgets:QArraysWidget,napari-hierarchical.sample_data.imc_mock,Make IMC mock sample data,napari_hierarchical.sample_data.imc_mock:make_sample_data,napari-hierarchical.make_groups_widget,Groups,False,napari-hierarchical.make_arrays_widget,Arrays,False,,,,,,,napari-hierarchical.sample_data.idr0052A,Make idr0052A sample data,napari_hierarchical.sample_data.idr0052A:make_sample_data,,,,,,,,napari-hierarchical.sample_data.imc_mock,imc_mock,"IMC mock data (Bodenmiller group, University of Zurich)",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-hierarchical.sample_data.idr0052A,idr0052A,"3D confocal time-lapse imaging of human condensins (Walther et al., 2018)",napari-hierarchical.sample_data.pollen,Make pollen sample data,napari_hierarchical.sample_data.pollen:make_sample_data,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-hierarchical.sample_data.pollen,pollen,"3D confocal imaging of a pollen grain (Computer Vision Group, University of Freiburg)" +195,napari-hippo,0.2.0,Hippo,A fat and clumsy collection of hyperspectral tools,Sam Thiele,MIT,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-hippo.get_ENVI_reader,Open ENVI format hyperspectral data,napari_hippo._reader:napari_get_ENVI_reader,napari-hippo.get_ENVI_reader,"['*.hdr', '*.dat', '*.png', '*.jpg', '*.jpeg', '*.bmp']",False,2.1,napari-hippo,0.2.0,,A fat and clumsy collection of hyperspectral tools,"# napari-hippo | | [![License MIT](https://img.shields.io/pypi/l/napari-hippo.svg?color=green)](https://github.com/samthiele/napari-hippo/blob/main/LICENSE) | [![PyPI](https://img.shields.io/pypi/v/napari-hippo.svg?color=green)](https://pypi.org/project/napari-hippo) | [![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-hippo)](https://napari-hub.org/plugins/napari-hippo) @@ -19874,12 +20905,12 @@ If you encounter any problems, please [file an issue](https://github.com/samthie ## Citation A citation for `napari-hippo` will be announced shortly. -",text/markdown,,Sam Thiele,s.thiele@hzdr.de,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['natsort', 'hylite', 'numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""hylite ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-hippo.get_specim_reader,"Open raw Specim image directories (for FX, Fenix and OWL cameras).",napari_hippo._reader:napari_get_specim_reader,napari-hippo.write_multiple,Save multi-layer data with Hippo,napari_hippo._writer:write_multiple,napari-hippo.write_single_image,Save image data with Hippo,napari_hippo._writer:write_single_image,napari-hippo.make_IOTools,Input / Output,False,napari-hippo.make_crunchyTools,Crunchy,False,napari-hippo.make_hyliteTools,Hylite,False,napari-hippo.make_fieldTools,Field QAQC,False,napari-hippo.make_sample_data,Load sample data from Hippo,napari_hippo._sample_data:make_sample_data,napari-hippo.write_multiple,"['image*', 'labels*']",,napari-hippo.write_single_image,"['image', 'labels*']","['.dat', '.hdr']",,napari-hippo.make_sample_data,unique_id.1,Hippo HSI,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-hippo.make_IOTools,Load and save hyperspectral datasets,napari_hippo._ioTools:IOWidget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-hippo.make_crunchyTools,Some crunchy tools for data munging,napari_hippo._crunchyTools:CrunchyToolsWidget,napari-hippo.make_hyliteTools,Basic hyperspectral data analysis,napari_hippo._hyliteTools:HyliteToolsWidget,napari-hippo.make_fieldTools,Quick field checks,napari_hippo._fieldTools:FieldToolsWidget,napari-hippo.make_caterpillar,Spectral viewer,napari_hippo._caterpillarWidget:CaterpillarWidget,,,,,,,,napari-hippo.make_caterpillar,Caterpillar,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -186,napari-hough-circle-detector,0.0.5,Hough circle detector,An interactive Hough transform for napari.,Florian Aymanns,,,643da382a989d73a10ff2518,['conda'],,https://pypi.org/project/napari-hough-circle-detector/,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-hough-circle-detector,http://api.anaconda.org/packages/conda-forge/napari-hough-circle-detector,http://anaconda.org/conda-forge/napari-hough-circle-detector,"['0.0.1', '0.0.3', '0.0.5']",0.0.3,0.0.5,['noarch'],5.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-hough-circle-detector/0.0.1,1.0,0.0,2023-04-17 19:52:31.412000+00:00,2023-09-06 19:17:52.274000+00:00,conda,noarch/napari-hough-circle-detector-0.0.1-pyhd8ed1ab_0.conda,0.0,GPL-3.0-only,False,python,"['napari', 'numpy', 'opencv', 'python >=3.8,<3.11', 'qtpy']",noarch,1681761030977.0,None-any-None,pyhd8ed1ab_0,2023-04-17 19:52:32.182000+00:00,29e3a2c58732d44d3191d65d0d3106be,c34730fa604d8651fa36ace8fc148093b84e5695b614689681a2a71b1e7db7b9,21942.0,conda-forge/napari-hough-circle-detector/0.0.1/noarch/napari-hough-circle-detector-0.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-hough-circle-detector/0.0.1/noarch/napari-hough-circle-detector-0.0.1-pyhd8ed1ab_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-hough-circle-detector.CircleDetectorWidget,Open circle detector widget,napari_hough_circle_detector:CircleDetectorWidget,,,,2.1,napari-hough-circle-detector,0.0.5,,An interactive Hough transform for napari.,"# napari-hough-circle-detector +",text/markdown,,Sam Thiele,s.thiele@hzdr.de,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['natsort', 'hylite', 'numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""hylite ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-hippo.get_specim_reader,"Open raw Specim image directories (for FX, Fenix and OWL cameras).",napari_hippo._reader:napari_get_specim_reader,napari-hippo.write_multiple,Save multi-layer data with Hippo,napari_hippo._writer:write_multiple,napari-hippo.write_single_image,Save image data with Hippo,napari_hippo._writer:write_single_image,napari-hippo.make_IOTools,Input / Output,False,napari-hippo.make_crunchyTools,Crunchy,False,napari-hippo.make_hyliteTools,Hylite,False,napari-hippo.make_fieldTools,Field QAQC,False,napari-hippo.make_sample_data,Load sample data from Hippo,napari_hippo._sample_data:make_sample_data,napari-hippo.write_multiple,"['image*', 'labels*']",,napari-hippo.write_single_image,"['image', 'labels*']","['.dat', '.hdr']",,napari-hippo.make_sample_data,unique_id.1,Hippo HSI,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-hippo.make_IOTools,Load and save hyperspectral datasets,napari_hippo._ioTools:IOWidget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-hippo.make_crunchyTools,Some crunchy tools for data munging,napari_hippo._crunchyTools:CrunchyToolsWidget,napari-hippo.make_hyliteTools,Basic hyperspectral data analysis,napari_hippo._hyliteTools:HyliteToolsWidget,napari-hippo.make_fieldTools,Quick field checks,napari_hippo._fieldTools:FieldToolsWidget,napari-hippo.make_caterpillar,Spectral viewer,napari_hippo._caterpillarWidget:CaterpillarWidget,,,,,napari-hippo.make_caterpillar,Caterpillar,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +196,napari-hough-circle-detector,0.0.5,Hough circle detector,An interactive Hough transform for napari.,Florian Aymanns,,,643da382a989d73a10ff2518,['conda'],,https://pypi.org/project/napari-hough-circle-detector/,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-hough-circle-detector,http://api.anaconda.org/packages/conda-forge/napari-hough-circle-detector,http://anaconda.org/conda-forge/napari-hough-circle-detector,"['0.0.1', '0.0.3', '0.0.5']",0.0.3,0.0.5,['noarch'],5.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-hough-circle-detector/0.0.1,1.0,0.0,2023-04-17 19:52:31.412000+00:00,2023-09-06 19:17:52.274000+00:00,conda,noarch/napari-hough-circle-detector-0.0.1-pyhd8ed1ab_0.conda,0.0,GPL-3.0-only,False,python,"['napari', 'numpy', 'opencv', 'python >=3.8,<3.11', 'qtpy']",noarch,1681761030977.0,None-any-None,pyhd8ed1ab_0,2023-04-17 19:52:32.182000+00:00,29e3a2c58732d44d3191d65d0d3106be,c34730fa604d8651fa36ace8fc148093b84e5695b614689681a2a71b1e7db7b9,21942.0,conda-forge/napari-hough-circle-detector/0.0.1/noarch/napari-hough-circle-detector-0.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-hough-circle-detector/0.0.1/noarch/napari-hough-circle-detector-0.0.1-pyhd8ed1ab_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-hough-circle-detector.CircleDetectorWidget,Open circle detector widget,napari_hough_circle_detector:CircleDetectorWidget,,,,2.1,napari-hough-circle-detector,0.0.5,,An interactive Hough transform for napari.,"# napari-hough-circle-detector A plugin for napari that detects circles using the Hough transform. -",text/markdown,,Florian Aymanns,florian.aymanns@epfl.ch,,['Framework :: napari'],"['napari[all]', 'opencv-contrib-python-headless', 'numpy', 'pyqt5', 'scikit-image']",,,,False,0.0.3,conda-forge/napari-hough-circle-detector/0.0.3,0.0.5,conda-forge/napari-hough-circle-detector/0.0.5,,,conda,noarch/napari-hough-circle-detector-0.0.3-pyhd8ed1ab_0.conda,0.0,GPL-3.0-only,False,python,"['napari', 'numpy', 'opencv', 'python >=3.8', 'qtpy', 'scikit-image']",pyhd8ed1ab_0,1682325807732.0,None-any-None,noarch,2023-04-24 08:45:47.444000+00:00,369ed82f034a14c289d70b373517f844,bb57afd4dbeee8ddd1a9f23de59f4ec709fd48663b910af7c54a97430b38b9ca,22955.0,conda-forge/napari-hough-circle-detector/0.0.3/noarch/napari-hough-circle-detector-0.0.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-hough-circle-detector/0.0.3/noarch/napari-hough-circle-detector-0.0.3-pyhd8ed1ab_0.conda,conda,0.0.3,conda-forge,['main'],conda,noarch/napari-hough-circle-detector-0.0.5-pyhd8ed1ab_0.conda,0.0,GPL-3.0-only,False,python,"['magicgui', 'napari', 'numpy', 'opencv', 'python >=3.8', 'qtpy', 'scikit-image']",noarch,1694027740638.0,None-any-None,pyhd8ed1ab_0,2023-09-06 19:17:50.345000+00:00,003d007ad06a8dd145cdd7869ee8489b,9f398cb0a9dfaab8535bffb66d9a7c1a76a0742dd604794dede4f9773006a9fe,23193.0,conda-forge/napari-hough-circle-detector/0.0.5/noarch/napari-hough-circle-detector-0.0.5-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-hough-circle-detector/0.0.5/noarch/napari-hough-circle-detector-0.0.5-pyhd8ed1ab_0.conda,conda,0.0.5,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-hough-circle-detector.CircleDetectorWidget,Circle detector,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -187,napari-IDS,0.0.8,napari IDS,Plug in which enables to take photo with IDS uEye camera,Tristan Cotte,BSD-3,https://github.com/tcotte/napari-IDS,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-IDS.make_qwidget,Make example QWidget,napari_ids._widget:LiveIDS,,,,2.1,napari_IDS,0.0.8,,Plug in which enables to take photo with IDS uEye camera,"# napari-IDS +",text/markdown,,Florian Aymanns,florian.aymanns@epfl.ch,,['Framework :: napari'],"['napari[all]', 'opencv-contrib-python-headless', 'numpy', 'pyqt5', 'scikit-image']",,,,False,0.0.3,conda-forge/napari-hough-circle-detector/0.0.3,0.0.5,conda-forge/napari-hough-circle-detector/0.0.5,,,conda,noarch/napari-hough-circle-detector-0.0.3-pyhd8ed1ab_0.conda,0.0,GPL-3.0-only,False,python,"['napari', 'numpy', 'opencv', 'python >=3.8', 'qtpy', 'scikit-image']",pyhd8ed1ab_0,1682325807732.0,None-any-None,noarch,2023-04-24 08:45:47.444000+00:00,369ed82f034a14c289d70b373517f844,bb57afd4dbeee8ddd1a9f23de59f4ec709fd48663b910af7c54a97430b38b9ca,22955.0,conda-forge/napari-hough-circle-detector/0.0.3/noarch/napari-hough-circle-detector-0.0.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-hough-circle-detector/0.0.3/noarch/napari-hough-circle-detector-0.0.3-pyhd8ed1ab_0.conda,conda,0.0.3,conda-forge,['main'],conda,noarch/napari-hough-circle-detector-0.0.5-pyhd8ed1ab_0.conda,0.0,GPL-3.0-only,False,python,"['magicgui', 'napari', 'numpy', 'opencv', 'python >=3.8', 'qtpy', 'scikit-image']",noarch,1694027740638.0,None-any-None,pyhd8ed1ab_0,2023-09-06 19:17:50.345000+00:00,003d007ad06a8dd145cdd7869ee8489b,9f398cb0a9dfaab8535bffb66d9a7c1a76a0742dd604794dede4f9773006a9fe,23193.0,conda-forge/napari-hough-circle-detector/0.0.5/noarch/napari-hough-circle-detector-0.0.5-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-hough-circle-detector/0.0.5/noarch/napari-hough-circle-detector-0.0.5-pyhd8ed1ab_0.conda,conda,0.0.5,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-hough-circle-detector.CircleDetectorWidget,Circle detector,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +197,napari-IDS,0.0.8,napari IDS,Plug in which enables to take photo with IDS uEye camera,Tristan Cotte,BSD-3,https://github.com/tcotte/napari-IDS,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-IDS.make_qwidget,Make example QWidget,napari_ids._widget:LiveIDS,,,,2.1,napari_IDS,0.0.8,,Plug in which enables to take photo with IDS uEye camera,"# napari-IDS [![License](https://img.shields.io/pypi/l/napari-IDS.svg?color=green)](https://github.com/githubuser/napari-IDS/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-IDS.svg?color=green)](https://pypi.org/project/napari-IDS) @@ -19958,8 +20989,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/tcotte/napari-IDS,Tristan Cotte,tristan.cotte@sgs.com,BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['opencv-python', 'numpy']",>=3.8,"['Bug Tracker, https://github.com/tcotte/napari-IDS/issues', 'Documentation, https://github.com/tcotte/napari-IDS#README.md', 'Source Code, https://github.com/tcotte/napari-IDS', 'User Support, https://github.com/tcotte/napari-IDS/issues']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-IDS.make_magic_widget,Make example magic widget,napari_ids._widget:example_magic_widget,napari-IDS.make_func_widget,Make example function widget,napari_ids._widget:example_function_widget,,,,napari-IDS.make_qwidget,Live IDS QWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -188,napari-image-stacker,0.1.10,napari-image-stacker,A plugin designed to convert multiple open layers into a stack or vice versa,"Robin Koch, Marc Boucsein",BSD3,https://github.com/RobAnKo/napari-image-stacker,61fd367627bdd9a91cfb6ca5,['conda'],,https://github.com/RobAnKo/napari-image-stacker,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-image-stacker,http://api.anaconda.org/packages/conda-forge/napari-image-stacker,http://anaconda.org/conda-forge/napari-image-stacker,"['0.1.8', '0.1.10']",0.1.10,0.1.10,['noarch'],4.0,,['pyhd8ed1ab_0'],0.1.8,conda-forge/napari-image-stacker/0.1.8,1.0,0.0,2022-02-04 14:21:40.167000+00:00,2023-06-18 08:40:46.785000+00:00,conda,noarch/napari-image-stacker-0.1.8-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7']",noarch,1643984343745.0,None-any-None,pyhd8ed1ab_0,2022-02-04 14:21:40.439000+00:00,3898714671a906ecb09c1e8d09a41382,None,10923.0,conda-forge/napari-image-stacker/0.1.8/noarch/napari-image-stacker-0.1.8-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-image-stacker/0.1.8/noarch/napari-image-stacker-0.1.8-pyhd8ed1ab_0.tar.bz2,conda,0.1.8,conda-forge,['main'],public,,0.2.1,napari-image-stacker.image_stacker_widget,image_stacker_widget,napari_image_stacker._dock_widget:image_stacker_widget,,,,2.1,napari-image-stacker,0.1.10,['UNKNOWN'],A plugin designed to convert multiple open layers into a stack or vice versa,"# napari-image-stacker +",text/markdown,https://github.com/tcotte/napari-IDS,Tristan Cotte,tristan.cotte@sgs.com,BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['opencv-python', 'numpy']",>=3.8,"['Bug Tracker, https://github.com/tcotte/napari-IDS/issues', 'Documentation, https://github.com/tcotte/napari-IDS#README.md', 'Source Code, https://github.com/tcotte/napari-IDS', 'User Support, https://github.com/tcotte/napari-IDS/issues']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-IDS.make_magic_widget,Make example magic widget,napari_ids._widget:example_magic_widget,napari-IDS.make_func_widget,Make example function widget,napari_ids._widget:example_function_widget,,,,napari-IDS.make_qwidget,Live IDS QWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +198,napari-image-stacker,0.1.10,napari-image-stacker,A plugin designed to convert multiple open layers into a stack or vice versa,"Robin Koch, Marc Boucsein",BSD3,https://github.com/RobAnKo/napari-image-stacker,61fd367627bdd9a91cfb6ca5,['conda'],,https://github.com/RobAnKo/napari-image-stacker,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-image-stacker,http://api.anaconda.org/packages/conda-forge/napari-image-stacker,http://anaconda.org/conda-forge/napari-image-stacker,"['0.1.8', '0.1.10']",0.1.10,0.1.10,['noarch'],4.0,,['pyhd8ed1ab_0'],0.1.8,conda-forge/napari-image-stacker/0.1.8,1.0,0.0,2022-02-04 14:21:40.167000+00:00,2023-06-18 08:40:46.785000+00:00,conda,noarch/napari-image-stacker-0.1.8-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7']",noarch,1643984343745.0,None-any-None,pyhd8ed1ab_0,2022-02-04 14:21:40.439000+00:00,3898714671a906ecb09c1e8d09a41382,None,10923.0,conda-forge/napari-image-stacker/0.1.8/noarch/napari-image-stacker-0.1.8-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-image-stacker/0.1.8/noarch/napari-image-stacker-0.1.8-pyhd8ed1ab_0.tar.bz2,conda,0.1.8,conda-forge,['main'],public,,0.2.1,napari-image-stacker.image_stacker_widget,image_stacker_widget,napari_image_stacker._dock_widget:image_stacker_widget,,,,2.1,napari-image-stacker,0.1.10,['UNKNOWN'],A plugin designed to convert multiple open layers into a stack or vice versa,"# napari-image-stacker [![License](https://img.shields.io/pypi/l/napari-image-stacker.svg?color=green)](https://github.com/RobAnKo/napari-image-stacker/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-image-stacker.svg?color=green)](https://pypi.org/project/napari-image-stacker) @@ -20011,10 +21042,10 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/RobAnKo/napari-image-stacker,"Robin Koch, Marc Boucsein",robin.koch@dkfz-heidelberg.de,BSD3,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy']",>=3.7,"['Bug Tracker, https://github.com/RobAnKo/napari-image-stacker/issues', 'Documentation, https://github.com/RobAnKo/napari-image-stacker#README.md', 'Source Code, https://github.com/RobAnKo/napari-image-stacker', 'User Support, https://github.com/RobAnKo/napari-image-stacker/issues']",,True,0.1.10,conda-forge/napari-image-stacker/0.1.10,,,,,conda,noarch/napari-image-stacker-0.1.10-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7']",pyhd8ed1ab_0,1644334405708.0,None-any-None,noarch,2022-02-08 15:35:57.179000+00:00,e2df165450ccbfa27cb87f87a344a4ac,None,10931.0,conda-forge/napari-image-stacker/0.1.10/noarch/napari-image-stacker-0.1.10-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-image-stacker/0.1.10/noarch/napari-image-stacker-0.1.10-pyhd8ed1ab_0.tar.bz2,conda,0.1.10,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-image-stacker.image_stacker_widget,image_stacker_widget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -189,napari-imagej,0.1.0,napari-imagej,ImageJ functionality from napari,,BSD-2-Clause,,649b2cbe36e4694c14022de8,['conda'],"napari-imagej is a napari plugin to access +",text/markdown,https://github.com/RobAnKo/napari-image-stacker,"Robin Koch, Marc Boucsein",robin.koch@dkfz-heidelberg.de,BSD3,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy']",>=3.7,"['Bug Tracker, https://github.com/RobAnKo/napari-image-stacker/issues', 'Documentation, https://github.com/RobAnKo/napari-image-stacker#README.md', 'Source Code, https://github.com/RobAnKo/napari-image-stacker', 'User Support, https://github.com/RobAnKo/napari-image-stacker/issues']",,True,0.1.10,conda-forge/napari-image-stacker/0.1.10,,,,,conda,noarch/napari-image-stacker-0.1.10-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7']",pyhd8ed1ab_0,1644334405708.0,None-any-None,noarch,2022-02-08 15:35:57.179000+00:00,e2df165450ccbfa27cb87f87a344a4ac,None,10931.0,conda-forge/napari-image-stacker/0.1.10/noarch/napari-image-stacker-0.1.10-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-image-stacker/0.1.10/noarch/napari-image-stacker-0.1.10-pyhd8ed1ab_0.tar.bz2,conda,0.1.10,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-image-stacker.image_stacker_widget,image_stacker_widget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +199,napari-imagej,0.1.0,napari-imagej,ImageJ functionality from napari,,BSD-2-Clause,,649b2cbe36e4694c14022de8,['conda'],"napari-imagej is a napari plugin to access ImageJ ecosystem functionality. -",https://github.com/imagej/napari-imagej,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-imagej,http://api.anaconda.org/packages/conda-forge/napari-imagej,http://anaconda.org/conda-forge/napari-imagej,['0.1.0'],0.1.0,0.1.0,['noarch'],3.0,https://github.com/imagej/napari-imagej,['pyhd8ed1ab_0'],0.1.0,conda-forge/napari-imagej/0.1.0,1.0,0.0,2023-06-27 18:38:50.707000+00:00,2023-06-27 18:38:54.180000+00:00,conda,noarch/napari-imagej-0.1.0-pyhd8ed1ab_0.conda,0.0,BSD-2-Clause,False,python,"['confuse', 'imglyb >=2.1.0', 'jpype1 >=1.4.1', 'labeling >=0.1.12', 'magicgui >=0.5.1', 'napari >=0.4.17', 'numpy', 'pandas', 'pyimagej >=1.4.1', 'python >=3.8,<=3.11.0', 'qtconsole !=5.4.2', 'scyjava >=1.8.1', 'typing_extensions !=4.6.0']",noarch,1687890977242.0,None-any-None,pyhd8ed1ab_0,2023-06-27 18:38:51.386000+00:00,ac47fff9923446502ef0d1a59c34fef1,eac022cb1dede79ceef07ef8db1fc3b78a35732ef78129c0528b2211393c59d0,86940.0,conda-forge/napari-imagej/0.1.0/noarch/napari-imagej-0.1.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-imagej/0.1.0/noarch/napari-imagej-0.1.0-pyhd8ed1ab_0.conda,conda,0.1.0,conda-forge,['main'],public,,0.2.1,napari-imagej.func,Run ImageJ2 commands,napari_imagej.widgets.napari_imagej:NapariImageJWidget,napari-imagej.get_trackmate_reader,['*.xml'],False,2.1,napari-imagej,0.1.0,,ImageJ functionality from napari,"# napari-imagej +",https://github.com/imagej/napari-imagej,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-imagej,http://api.anaconda.org/packages/conda-forge/napari-imagej,http://anaconda.org/conda-forge/napari-imagej,"['0.1.0', '0.2.0']",0.2.0,0.2.0,['noarch'],7.0,https://github.com/imagej/napari-imagej,"['pyha07c04f_0', 'pyhd8ed1ab_0']",0.1.0,conda-forge/napari-imagej/0.1.0,1.0,0.0,2023-06-27 18:38:50.707000+00:00,2024-12-21 06:55:06.839000+00:00,conda,noarch/napari-imagej-0.1.0-pyhd8ed1ab_0.conda,0.0,BSD-2-Clause,False,python,"['confuse', 'imglyb >=2.1.0', 'jpype1 >=1.4.1', 'labeling >=0.1.12', 'magicgui >=0.5.1', 'napari >=0.4.17', 'numpy', 'pandas', 'pyimagej >=1.4.1', 'python >=3.8,<=3.11.0', 'qtconsole !=5.4.2', 'scyjava >=1.8.1', 'typing_extensions !=4.6.0']",noarch,1687890977242.0,None-any-None,pyhd8ed1ab_0,2023-06-27 18:38:51.386000+00:00,ac47fff9923446502ef0d1a59c34fef1,eac022cb1dede79ceef07ef8db1fc3b78a35732ef78129c0528b2211393c59d0,86940.0,conda-forge/napari-imagej/0.1.0/noarch/napari-imagej-0.1.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-imagej/0.1.0/noarch/napari-imagej-0.1.0-pyhd8ed1ab_0.conda,conda,0.1.0,conda-forge,['main'],public,,0.2.1,napari-imagej.func,Run ImageJ2 commands,napari_imagej.widgets.napari_imagej:NapariImageJWidget,napari-imagej.get_trackmate_reader,['*.xml'],False,2.1,napari-imagej,0.1.0,,ImageJ functionality from napari,"# napari-imagej ### A [napari] plugin for access to [ImageJ2] @@ -20096,8 +21127,8 @@ Distributed under the terms of the [BSD-2] license, [PyPI]: https://pypi.org/ [SciJava Scripts]: https://imagej.net/scripting [tox]: https://tox.readthedocs.io/ -",text/markdown,,,ImageJ2 developers ,BSD-2-Clause,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Operating System :: Microsoft :: Windows', 'Operating System :: Unix', 'Operating System :: MacOS', 'License :: OSI Approved :: BSD License', 'Topic :: Scientific/Engineering', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Visualization', 'Topic :: Software Development :: Libraries :: Java Libraries', 'Topic :: Software Development :: Libraries :: Python Modules']","['confuse', 'imglyb (>=2.1.0)', 'jpype1 (>=1.4.1)', 'labeling (>=0.1.12)', 'magicgui (>=0.5.1)', 'napari (>=0.4.17)', 'numpy', 'pandas', 'pyimagej (>=1.4.1)', 'scyjava (>=1.8.1)', 'qtconsole (!=5.4.2)', 'typing-extensions (!=4.6.0)', ""autopep8 ; extra == 'dev'"", ""black (>=23.1.0) ; extra == 'dev'"", ""build ; extra == 'dev'"", ""flake8 ; extra == 'dev'"", ""flake8-pyproject ; extra == 'dev'"", ""flake8-typing-imports ; extra == 'dev'"", ""isort ; extra == 'dev'"", ""myst-parser ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""pyqt5 ; extra == 'dev'"", ""pytest ; extra == 'dev'"", ""pytest-cov ; extra == 'dev'"", ""pytest-env ; extra == 'dev'"", ""pytest-qt ; extra == 'dev'"", ""sphinx ; extra == 'dev'"", ""sphinx-copybutton ; extra == 'dev'"", ""sphinx-rtd-theme ; extra == 'dev'"", ""qtpy ; extra == 'dev'"", ""validate-pyproject[all] ; extra == 'dev'""]","<=3.11.0,>=3.8","['homepage, https://github.com/imagej/napari-imagej', 'documentation, https://github.com/imagej/napari-imagej#README.md', 'source, https://github.com/imagej/napari-imagej', 'download, https://pypi.org/project/napari-imagej/', 'tracker, https://github.com/imagej/napari-imagej/issues']",['dev'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-imagej.get_trackmate_reader,Open TrackMate XML,napari_imagej.readers.trackMate_reader:napari_get_reader,,,,,,,napari-imagej.func,ImageJ2,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -190,napari-imaris-loader,0.1.8,napari-imaris-loader,Napari plugin for loading Bitplane imaris files '.ims',Alan M Watson,BSD-3-Clause,https://github.com/AlanMWatson/napari-imaris-loader,62091a81414b5ba20e8579d5,['conda'],,https://github.com/AlanMWatson/napari-imaris-loader,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-imaris-loader,http://api.anaconda.org/packages/conda-forge/napari-imaris-loader,http://anaconda.org/conda-forge/napari-imaris-loader,"['0.1.4', '0.1.5', '0.1.6', '0.1.8']",0.1.8,0.1.8,['noarch'],6.0,,['pyhd8ed1ab_0'],0.1.4,conda-forge/napari-imaris-loader/0.1.4,1.0,0.0,2022-02-13 14:49:34.808000+00:00,2023-06-18 08:40:50.995000+00:00,conda,noarch/napari-imaris-loader-0.1.4-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core', 'h5py', 'imaris-ims-file-reader', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.8']",noarch,1644763618199.0,None-any-None,pyhd8ed1ab_0,2022-02-13 14:49:35.804000+00:00,9852ba388b2f0739809980dab4916bee,None,13345.0,conda-forge/napari-imaris-loader/0.1.4/noarch/napari-imaris-loader-0.1.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-imaris-loader/0.1.4/noarch/napari-imaris-loader-0.1.4-pyhd8ed1ab_0.tar.bz2,conda,0.1.4,conda-forge,['main'],public,,0.2.1,napari-imaris-loader.resolution_change,resolution_change,napari_imaris_loader.resolution_change_widget:resolution_change,napari-imaris-loader.napari_get_reader,['*'],True,2.1,napari-imaris-loader,0.1.8,['UNKNOWN'],Napari plugin for loading Bitplane imaris files '.ims'," +",text/markdown,,,ImageJ2 developers ,BSD-2-Clause,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Operating System :: Microsoft :: Windows', 'Operating System :: Unix', 'Operating System :: MacOS', 'License :: OSI Approved :: BSD License', 'Topic :: Scientific/Engineering', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Visualization', 'Topic :: Software Development :: Libraries :: Java Libraries', 'Topic :: Software Development :: Libraries :: Python Modules']","['confuse', 'imglyb (>=2.1.0)', 'jpype1 (>=1.4.1)', 'labeling (>=0.1.12)', 'magicgui (>=0.5.1)', 'napari (>=0.4.17)', 'numpy', 'pandas', 'pyimagej (>=1.4.1)', 'scyjava (>=1.8.1)', 'qtconsole (!=5.4.2)', 'typing-extensions (!=4.6.0)', ""autopep8 ; extra == 'dev'"", ""black (>=23.1.0) ; extra == 'dev'"", ""build ; extra == 'dev'"", ""flake8 ; extra == 'dev'"", ""flake8-pyproject ; extra == 'dev'"", ""flake8-typing-imports ; extra == 'dev'"", ""isort ; extra == 'dev'"", ""myst-parser ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""pyqt5 ; extra == 'dev'"", ""pytest ; extra == 'dev'"", ""pytest-cov ; extra == 'dev'"", ""pytest-env ; extra == 'dev'"", ""pytest-qt ; extra == 'dev'"", ""sphinx ; extra == 'dev'"", ""sphinx-copybutton ; extra == 'dev'"", ""sphinx-rtd-theme ; extra == 'dev'"", ""qtpy ; extra == 'dev'"", ""validate-pyproject[all] ; extra == 'dev'""]","<=3.11.0,>=3.8","['homepage, https://github.com/imagej/napari-imagej', 'documentation, https://github.com/imagej/napari-imagej#README.md', 'source, https://github.com/imagej/napari-imagej', 'download, https://pypi.org/project/napari-imagej/', 'tracker, https://github.com/imagej/napari-imagej/issues']",['dev'],False,0.2.0,conda-forge/napari-imagej/0.2.0,,,,,conda,noarch/napari-imagej-0.2.0-pyha07c04f_0.conda,0.0,BSD-2-Clause,False,python,"['confuse >=2.0.0', 'imglyb >=2.1.0', 'jpype1 >=1.4.1', 'labeling >=0.1.12', 'magicgui >=0.5.1', 'napari >=0.4.17', 'numpy', 'pandas', 'pyimagej >=1.4.1', 'python >=3.9,<3.13.0', 'qtconsole !=5.4.2', 'scyjava >=1.9.1', 'superqt >=0.7.0', 'typing_extensions !=4.6.0', 'xarray <2024.10.0']",pyha07c04f_0,1734763985912.0,None-any-None,noarch,2024-12-21 06:55:04.147000+00:00,33921df50f692532d3940fa1d2338384,3eff1229e82655b9bb8b1ca482d7e0a2227be607c9ea5ba8e450ec055df662c1,94959.0,conda-forge/napari-imagej/0.2.0/noarch/napari-imagej-0.2.0-pyha07c04f_0.conda,//api.anaconda.org/download/conda-forge/napari-imagej/0.2.0/noarch/napari-imagej-0.2.0-pyha07c04f_0.conda,conda,0.2.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-imagej.get_trackmate_reader,Open TrackMate XML,napari_imagej.readers.trackMate_reader:napari_get_reader,,,,,,,napari-imagej.func,ImageJ2,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +200,napari-imaris-loader,0.1.8,napari-imaris-loader,Napari plugin for loading Bitplane imaris files '.ims',Alan M Watson,BSD-3-Clause,https://github.com/AlanMWatson/napari-imaris-loader,62091a81414b5ba20e8579d5,['conda'],,https://github.com/AlanMWatson/napari-imaris-loader,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-imaris-loader,http://api.anaconda.org/packages/conda-forge/napari-imaris-loader,http://anaconda.org/conda-forge/napari-imaris-loader,"['0.1.4', '0.1.5', '0.1.6', '0.1.8']",0.1.8,0.1.8,['noarch'],6.0,,['pyhd8ed1ab_0'],0.1.4,conda-forge/napari-imaris-loader/0.1.4,1.0,0.0,2022-02-13 14:49:34.808000+00:00,2023-06-18 08:40:50.995000+00:00,conda,noarch/napari-imaris-loader-0.1.4-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core', 'h5py', 'imaris-ims-file-reader', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.8']",noarch,1644763618199.0,None-any-None,pyhd8ed1ab_0,2022-02-13 14:49:35.804000+00:00,9852ba388b2f0739809980dab4916bee,None,13345.0,conda-forge/napari-imaris-loader/0.1.4/noarch/napari-imaris-loader-0.1.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-imaris-loader/0.1.4/noarch/napari-imaris-loader-0.1.4-pyhd8ed1ab_0.tar.bz2,conda,0.1.4,conda-forge,['main'],public,,0.2.1,napari-imaris-loader.resolution_change,resolution_change,napari_imaris_loader.resolution_change_widget:resolution_change,napari-imaris-loader.napari_get_reader,['*'],True,2.1,napari-imaris-loader,0.1.8,['UNKNOWN'],Napari plugin for loading Bitplane imaris files '.ims'," # Description @@ -20223,8 +21254,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/AlanMWatson/napari-imaris-loader,Alan M Watson,alan.watson@pitt.edu,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari[all]', 'napari-plugin-engine (>=0.1.4)', 'imaris-ims-file-reader (>=0.1.5)', 'numpy', 'h5py', 'dask']",>=3.8,"['Bug Tracker, https://github.com/AlanMWatson/napari-imaris-loader/issues', 'Documentation, https://github.com/AlanMWatson/napari-imaris-loader#README.md', 'Source Code, https://github.com/AlanMWatson/napari-imaris-loader', 'User Support, https://github.com/AlanMWatson/napari-imaris-loader/issues']",,True,0.1.5,conda-forge/napari-imaris-loader/0.1.5,0.1.6,conda-forge/napari-imaris-loader/0.1.6,0.1.8,conda-forge/napari-imaris-loader/0.1.8,conda,noarch/napari-imaris-loader-0.1.5-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core', 'h5py', 'imaris-ims-file-reader >=0.1.5', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.8']",pyhd8ed1ab_0,1644843367065.0,None-any-None,noarch,2022-02-14 12:58:34.613000+00:00,a90cd8a6eeb683409bca00ab05cf2822,None,13468.0,conda-forge/napari-imaris-loader/0.1.5/noarch/napari-imaris-loader-0.1.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-imaris-loader/0.1.5/noarch/napari-imaris-loader-0.1.5-pyhd8ed1ab_0.tar.bz2,conda,0.1.5,conda-forge,['main'],conda,noarch/napari-imaris-loader-0.1.6-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core', 'h5py', 'imaris-ims-file-reader >=0.1.5', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.8']",noarch,1648456741945.0,None-any-None,pyhd8ed1ab_0,2022-03-28 08:41:10.089000+00:00,2b477af13fee09c133c8bfa61e396eb0,None,13474.0,conda-forge/napari-imaris-loader/0.1.6/noarch/napari-imaris-loader-0.1.6-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-imaris-loader/0.1.6/noarch/napari-imaris-loader-0.1.6-pyhd8ed1ab_0.tar.bz2,conda,0.1.6,conda-forge,['main'],conda,noarch/napari-imaris-loader-0.1.8-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['dask-core', 'h5py', 'imaris-ims-file-reader >=0.1.5', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.8']",BSD-3-Clause,python,1649941231440.0,2022-04-14 13:02:48.463000+00:00,3e7dfc1622c785606afdf33087981410,None,13618.0,conda-forge/napari-imaris-loader/0.1.8/noarch/napari-imaris-loader-0.1.8-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-imaris-loader/0.1.8/noarch/napari-imaris-loader-0.1.8-pyhd8ed1ab_0.tar.bz2,conda,0.1.8,conda-forge,['main'],,,,,,,,,,,napari-imaris-loader.resolution_change,resolution_change,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -191,napari-imc,0.6.5,napari-imc,Imaging Mass Cytometry (IMC) file type support for napari,Jonas Windhager,MIT,https://github.com/BodenmillerGroup/napari-imc,61fa69a303b93eb2b184c4ce,['conda'],,https://github.com/BodenmillerGroup/napari-imc,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-imc,http://api.anaconda.org/packages/conda-forge/napari-imc,http://anaconda.org/conda-forge/napari-imc,"['0.6.3', '0.6.4', '0.6.5']",0.6.5,0.6.5,['noarch'],5.0,,['pyhd8ed1ab_0'],0.6.3,conda-forge/napari-imc/0.6.3,1.0,0.0,2022-02-02 11:23:13.059000+00:00,2023-06-18 08:40:41.030000+00:00,conda,noarch/napari-imc-0.6.3-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'qtpy', 'readimc >=0.5.0', 'superqt']",noarch,1643800832800.0,None-any-None,pyhd8ed1ab_0,2022-02-02 11:23:13.498000+00:00,c60a7f1224a651183b711bf56551dd90,None,20450.0,conda-forge/napari-imc/0.6.3/noarch/napari-imc-0.6.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-imc/0.6.3/noarch/napari-imc-0.6.3-pyhd8ed1ab_0.tar.bz2,conda,0.6.3,conda-forge,['main'],public,,0.1.0,napari-imc.IMCWidget,Create Imaging Mass Cytometry,napari_imc:IMCWidget,napari-imc.get_reader,"['*.mcd', '*.txt']",False,2.1,napari-imc,0.6.5,,Imaging Mass Cytometry (IMC) file type support for napari,"# napari-imc +",text/markdown,https://github.com/AlanMWatson/napari-imaris-loader,Alan M Watson,alan.watson@pitt.edu,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari[all]', 'napari-plugin-engine (>=0.1.4)', 'imaris-ims-file-reader (>=0.1.5)', 'numpy', 'h5py', 'dask']",>=3.8,"['Bug Tracker, https://github.com/AlanMWatson/napari-imaris-loader/issues', 'Documentation, https://github.com/AlanMWatson/napari-imaris-loader#README.md', 'Source Code, https://github.com/AlanMWatson/napari-imaris-loader', 'User Support, https://github.com/AlanMWatson/napari-imaris-loader/issues']",,True,0.1.5,conda-forge/napari-imaris-loader/0.1.5,0.1.6,conda-forge/napari-imaris-loader/0.1.6,0.1.8,conda-forge/napari-imaris-loader/0.1.8,conda,noarch/napari-imaris-loader-0.1.5-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core', 'h5py', 'imaris-ims-file-reader >=0.1.5', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.8']",pyhd8ed1ab_0,1644843367065.0,None-any-None,noarch,2022-02-14 12:58:34.613000+00:00,a90cd8a6eeb683409bca00ab05cf2822,None,13468.0,conda-forge/napari-imaris-loader/0.1.5/noarch/napari-imaris-loader-0.1.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-imaris-loader/0.1.5/noarch/napari-imaris-loader-0.1.5-pyhd8ed1ab_0.tar.bz2,conda,0.1.5,conda-forge,['main'],conda,noarch/napari-imaris-loader-0.1.6-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core', 'h5py', 'imaris-ims-file-reader >=0.1.5', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.8']",noarch,1648456741945.0,None-any-None,pyhd8ed1ab_0,2022-03-28 08:41:10.089000+00:00,2b477af13fee09c133c8bfa61e396eb0,None,13474.0,conda-forge/napari-imaris-loader/0.1.6/noarch/napari-imaris-loader-0.1.6-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-imaris-loader/0.1.6/noarch/napari-imaris-loader-0.1.6-pyhd8ed1ab_0.tar.bz2,conda,0.1.6,conda-forge,['main'],conda,noarch/napari-imaris-loader-0.1.8-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['dask-core', 'h5py', 'imaris-ims-file-reader >=0.1.5', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.8']",BSD-3-Clause,python,1649941231440.0,2022-04-14 13:02:48.463000+00:00,3e7dfc1622c785606afdf33087981410,None,13618.0,conda-forge/napari-imaris-loader/0.1.8/noarch/napari-imaris-loader-0.1.8-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-imaris-loader/0.1.8/noarch/napari-imaris-loader-0.1.8-pyhd8ed1ab_0.tar.bz2,conda,0.1.8,conda-forge,['main'],,,,,,,,,,,napari-imaris-loader.resolution_change,resolution_change,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +201,napari-imc,0.6.5,napari-imc,Imaging Mass Cytometry (IMC) file type support for napari,Jonas Windhager,MIT,https://github.com/BodenmillerGroup/napari-imc,61fa69a303b93eb2b184c4ce,['conda'],,https://github.com/BodenmillerGroup/napari-imc,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-imc,http://api.anaconda.org/packages/conda-forge/napari-imc,http://anaconda.org/conda-forge/napari-imc,"['0.6.3', '0.6.4', '0.6.5']",0.6.5,0.6.5,['noarch'],5.0,,['pyhd8ed1ab_0'],0.6.3,conda-forge/napari-imc/0.6.3,1.0,0.0,2022-02-02 11:23:13.059000+00:00,2023-06-18 08:40:41.030000+00:00,conda,noarch/napari-imc-0.6.3-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'qtpy', 'readimc >=0.5.0', 'superqt']",noarch,1643800832800.0,None-any-None,pyhd8ed1ab_0,2022-02-02 11:23:13.498000+00:00,c60a7f1224a651183b711bf56551dd90,None,20450.0,conda-forge/napari-imc/0.6.3/noarch/napari-imc-0.6.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-imc/0.6.3/noarch/napari-imc-0.6.3-pyhd8ed1ab_0.tar.bz2,conda,0.6.3,conda-forge,['main'],public,,0.1.0,napari-imc.IMCWidget,Create Imaging Mass Cytometry,napari_imc:IMCWidget,napari-imc.get_reader,"['*.mcd', '*.txt']",False,2.1,napari-imc,0.6.5,,Imaging Mass Cytometry (IMC) file type support for napari,"# napari-imc [![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-imc)](https://napari-hub.org/plugins/napari-imc) [![PyPI](https://img.shields.io/pypi/v/napari-imc.svg?color=green)](https://pypi.org/project/napari-imc) @@ -20287,8 +21318,8 @@ Please cite the following paper when using napari-imc in your work: ## License [MIT](https://github.com/BodenmillerGroup/napari-imc/blob/main/LICENSE.md) -",text/markdown,https://github.com/BodenmillerGroup/napari-imc,Jonas Windhager,jonas.windhager@uzh.ch,MIT,"['Development Status :: 4 - Beta', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['numpy', 'qtpy', 'readimc', 'superqt']",>=3.8,"['Bug Tracker, https://github.com/BodenmillerGroup/napari-imc/issues', 'Documentation, https://github.com/BodenmillerGroup/napari-imc#README.md', 'Source Code, https://github.com/BodenmillerGroup/napari-imc', 'User Support, https://github.com/BodenmillerGroup/napari-imc/issues']",,False,0.6.4,conda-forge/napari-imc/0.6.4,0.6.5,conda-forge/napari-imc/0.6.5,,,conda,noarch/napari-imc-0.6.4-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'qtpy', 'readimc >=0.5.0', 'superqt']",pyhd8ed1ab_0,1643988648996.0,None-any-None,noarch,2022-02-04 15:33:35.251000+00:00,b38a0277cffc45e24d412cc01a83a429,None,20618.0,conda-forge/napari-imc/0.6.4/noarch/napari-imc-0.6.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-imc/0.6.4/noarch/napari-imc-0.6.4-pyhd8ed1ab_0.tar.bz2,conda,0.6.4,conda-forge,['main'],conda,noarch/napari-imc-0.6.5-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'qtpy', 'readimc >=0.5.0', 'superqt']",noarch,1654160193446.0,None-any-None,pyhd8ed1ab_0,2022-06-02 08:59:02.702000+00:00,8f15e128b14f1411aa1d5102d8798ddf,None,21009.0,conda-forge/napari-imc/0.6.5/noarch/napari-imc-0.6.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-imc/0.6.5/noarch/napari-imc-0.6.5-pyhd8ed1ab_0.tar.bz2,conda,0.6.5,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,napari-imc.get_reader,Read Imaging Mass Cytometry (IMC) files using readimc,napari_imc:napari_get_reader,,,,,,,napari-imc.IMCWidget,Imaging Mass Cytometry,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -192,napari-imodmodel,1.0.2,Napari Imod Model,Open IMOD model files in napari,Moritz Wachsmuth-Melm,BSD-3-Clause,https://github.com/MoritzWM/napari-imodmodel,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-imodmodel.get_reader,Open data with Napari Imod Model,napari_imodmodel._reader:napari_get_reader,napari-imodmodel.get_reader,['*.mod'],False,2.1,napari-imodmodel,1.0.2,,Open IMOD model files in napari,"# napari-imodmodel +",text/markdown,https://github.com/BodenmillerGroup/napari-imc,Jonas Windhager,jonas.windhager@uzh.ch,MIT,"['Development Status :: 4 - Beta', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['numpy', 'qtpy', 'readimc', 'superqt']",>=3.8,"['Bug Tracker, https://github.com/BodenmillerGroup/napari-imc/issues', 'Documentation, https://github.com/BodenmillerGroup/napari-imc#README.md', 'Source Code, https://github.com/BodenmillerGroup/napari-imc', 'User Support, https://github.com/BodenmillerGroup/napari-imc/issues']",,False,0.6.4,conda-forge/napari-imc/0.6.4,0.6.5,conda-forge/napari-imc/0.6.5,,,conda,noarch/napari-imc-0.6.4-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'qtpy', 'readimc >=0.5.0', 'superqt']",pyhd8ed1ab_0,1643988648996.0,None-any-None,noarch,2022-02-04 15:33:35.251000+00:00,b38a0277cffc45e24d412cc01a83a429,None,20618.0,conda-forge/napari-imc/0.6.4/noarch/napari-imc-0.6.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-imc/0.6.4/noarch/napari-imc-0.6.4-pyhd8ed1ab_0.tar.bz2,conda,0.6.4,conda-forge,['main'],conda,noarch/napari-imc-0.6.5-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'qtpy', 'readimc >=0.5.0', 'superqt']",noarch,1654160193446.0,None-any-None,pyhd8ed1ab_0,2022-06-02 08:59:02.702000+00:00,8f15e128b14f1411aa1d5102d8798ddf,None,21009.0,conda-forge/napari-imc/0.6.5/noarch/napari-imc-0.6.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-imc/0.6.5/noarch/napari-imc-0.6.5-pyhd8ed1ab_0.tar.bz2,conda,0.6.5,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,napari-imc.get_reader,Read Imaging Mass Cytometry (IMC) files using readimc,napari_imc:napari_get_reader,,,,,,,napari-imc.IMCWidget,Imaging Mass Cytometry,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +202,napari-imodmodel,1.0.2,Napari Imod Model,Open IMOD model files in napari,Moritz Wachsmuth-Melm,BSD-3-Clause,https://github.com/MoritzWM/napari-imodmodel,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-imodmodel.get_reader,Open data with Napari Imod Model,napari_imodmodel._reader:napari_get_reader,napari-imodmodel.get_reader,['*.mod'],False,2.1,napari-imodmodel,1.0.2,,Open IMOD model files in napari,"# napari-imodmodel [![License BSD-3](https://img.shields.io/pypi/l/napari-imodmodel.svg?color=green)](https://github.com/MoritzWM/napari-imodmodel/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-imodmodel.svg?color=green)](https://pypi.org/project/napari-imodmodel) @@ -20355,8 +21386,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/MoritzWM/napari-imodmodel,Moritz Wachsmuth-Melm,mail@moritzwm.de,BSD-3-Clause,"['Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'imodmodel', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/MoritzWM/napari-imodmodel/issues', 'Documentation, https://github.com/MoritzWM/napari-imodmodel#README.md', 'Source Code, https://github.com/MoritzWM/napari-imodmodel', 'User Support, https://github.com/MoritzWM/napari-imodmodel/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-imodmodel.make_sample_data,Load sample data from Napari Imod Model,napari_imodmodel._sample_data:make_sample_data,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-imodmodel.make_sample_data,unique_id.1,Napari Imod Model,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -193,napari-imsmicrolink,0.1.9,napari-imsmicrolink,Plugin to perform IMS to microscopy registration using laser ablation marks.,Nathan Heath Patterson,MIT,https://github.com/nhpatterson/napari-imsmicrolink,62018a658d5f58936415fb85,['conda'],,https://github.com/nhpatterson/napari-imsmicrolink,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-imsmicrolink,http://api.anaconda.org/packages/conda-forge/napari-imsmicrolink,http://anaconda.org/conda-forge/napari-imsmicrolink,"['0.1.5.1', '0.1.5.2', '0.1.7', '0.1.8', '0.1.9']",0.1.9,0.1.9,['noarch'],7.0,https://github.com/nhpatterson/napari-imsmicrolink,['pyhd8ed1ab_0'],0.1.5.1,conda-forge/napari-imsmicrolink/0.1.5.1,1.0,0.0,2022-02-07 21:08:51.906000+00:00,2023-06-18 08:40:48.346000+00:00,conda,noarch/napari-imsmicrolink-0.1.5.1-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['aicsimageio', 'bioformats_jar', 'czifile', 'dask-core', 'h5py', 'imagecodecs', 'napari', 'napari-plugin-engine', 'numpy', 'opencv', 'pandas', 'python >=3.7', 'qtpy', 'simpleitk', 'tifffile', 'zarr >=2.10.3']",noarch,1644267414434.0,None-any-None,pyhd8ed1ab_0,2022-02-07 21:08:52.206000+00:00,6fd044d894a63bbdc34429c3e03efe0b,None,38745.0,conda-forge/napari-imsmicrolink/0.1.5.1/noarch/napari-imsmicrolink-0.1.5.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-imsmicrolink/0.1.5.1/noarch/napari-imsmicrolink-0.1.5.1-pyhd8ed1ab_0.tar.bz2,conda,0.1.5.1,conda-forge,['main'],public,,0.1.0,napari-imsmicrolink.IMSMicroLink,Create IMS Micro Link,napari_imsmicrolink._dock_widget:IMSMicroLink,,,,2.1,napari-imsmicrolink,0.1.9,,Plugin to perform IMS to microscopy registration using laser ablation marks.,"# napari-imsmicrolink +",text/markdown,https://github.com/MoritzWM/napari-imodmodel,Moritz Wachsmuth-Melm,mail@moritzwm.de,BSD-3-Clause,"['Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'imodmodel', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/MoritzWM/napari-imodmodel/issues', 'Documentation, https://github.com/MoritzWM/napari-imodmodel#README.md', 'Source Code, https://github.com/MoritzWM/napari-imodmodel', 'User Support, https://github.com/MoritzWM/napari-imodmodel/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-imodmodel.make_sample_data,Load sample data from Napari Imod Model,napari_imodmodel._sample_data:make_sample_data,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-imodmodel.make_sample_data,unique_id.1,Napari Imod Model,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +203,napari-imsmicrolink,0.1.9,napari-imsmicrolink,Plugin to perform IMS to microscopy registration using laser ablation marks.,Nathan Heath Patterson,MIT,https://github.com/nhpatterson/napari-imsmicrolink,62018a658d5f58936415fb85,['conda'],,https://github.com/nhpatterson/napari-imsmicrolink,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-imsmicrolink,http://api.anaconda.org/packages/conda-forge/napari-imsmicrolink,http://anaconda.org/conda-forge/napari-imsmicrolink,"['0.1.5.1', '0.1.5.2', '0.1.7', '0.1.8', '0.1.9']",0.1.9,0.1.9,['noarch'],7.0,https://github.com/nhpatterson/napari-imsmicrolink,['pyhd8ed1ab_0'],0.1.5.1,conda-forge/napari-imsmicrolink/0.1.5.1,1.0,0.0,2022-02-07 21:08:51.906000+00:00,2023-06-18 08:40:48.346000+00:00,conda,noarch/napari-imsmicrolink-0.1.5.1-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['aicsimageio', 'bioformats_jar', 'czifile', 'dask-core', 'h5py', 'imagecodecs', 'napari', 'napari-plugin-engine', 'numpy', 'opencv', 'pandas', 'python >=3.7', 'qtpy', 'simpleitk', 'tifffile', 'zarr >=2.10.3']",noarch,1644267414434.0,None-any-None,pyhd8ed1ab_0,2022-02-07 21:08:52.206000+00:00,6fd044d894a63bbdc34429c3e03efe0b,None,38745.0,conda-forge/napari-imsmicrolink/0.1.5.1/noarch/napari-imsmicrolink-0.1.5.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-imsmicrolink/0.1.5.1/noarch/napari-imsmicrolink-0.1.5.1-pyhd8ed1ab_0.tar.bz2,conda,0.1.5.1,conda-forge,['main'],public,,0.1.0,napari-imsmicrolink.IMSMicroLink,Create IMS Micro Link,napari_imsmicrolink._dock_widget:IMSMicroLink,,,,2.1,napari-imsmicrolink,0.1.9,,Plugin to perform IMS to microscopy registration using laser ablation marks.,"# napari-imsmicrolink ![microlink-logo-update](https://user-images.githubusercontent.com/17855764/146078168-dd557089-ff10-46d6-b24d-268f5d21a9ee.png) [![License](https://img.shields.io/pypi/l/napari-imsmicrolink.svg?color=green)](https://github.com/nhpatterson/napari-imsmicrolink/raw/master/LICENSE) @@ -20435,8 +21466,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/nhpatterson/napari-imsmicrolink,Nathan Heath Patterson,heath.patterson@vanderbilt.edu,MIT,"['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['numpy', 'tifffile', 'dask', 'zarr (>=2.10.3)', 'qtpy', 'aicsimageio[bioformats]', 'bioformats-jar', 'SimpleITK', 'pandas', 'h5py', 'opencv-python', 'czifile', 'imagecodecs', 'napari[all]']",>=3.8,"['Bug Tracker, https://github.com/nhpatterson/napari-imsmicrolink/issues', 'Documentation, https://github.com/nhpatterson/napari-imsmicrolink#README.md', 'Source Code, https://github.com/nhpatterson/napari-imsmicrolink', 'User Support, https://github.com/nhpatterson/napari-imsmicrolink/issues']",,False,0.1.5.2,conda-forge/napari-imsmicrolink/0.1.5.2,0.1.7,conda-forge/napari-imsmicrolink/0.1.7,0.1.8,conda-forge/napari-imsmicrolink/0.1.8,conda,noarch/napari-imsmicrolink-0.1.5.2-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['aicsimageio', 'bioformats_jar', 'czifile', 'dask-core', 'h5py', 'imagecodecs', 'napari', 'napari-plugin-engine', 'numpy', 'opencv', 'pandas', 'python >=3.7', 'qtpy', 'simpleitk', 'tifffile', 'zarr >=2.10.3']",pyhd8ed1ab_0,1644334556246.0,None-any-None,noarch,2022-02-08 15:47:39.712000+00:00,dabe3eace7836e78cb6f7e019a10894a,None,38766.0,conda-forge/napari-imsmicrolink/0.1.5.2/noarch/napari-imsmicrolink-0.1.5.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-imsmicrolink/0.1.5.2/noarch/napari-imsmicrolink-0.1.5.2-pyhd8ed1ab_0.tar.bz2,conda,0.1.5.2,conda-forge,['main'],conda,noarch/napari-imsmicrolink-0.1.7-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['aicsimageio', 'bioformats_jar', 'czifile', 'dask-core', 'h5py', 'imagecodecs', 'napari', 'napari-plugin-engine', 'numpy', 'opencv', 'pandas', 'python >=3.7', 'qtpy', 'simpleitk', 'tifffile', 'zarr >=2.10.3']",noarch,1652303144779.0,None-any-None,pyhd8ed1ab_0,2022-05-11 21:19:13.483000+00:00,4bb755a3fc84b2cd26996fcc9d95ccba,None,38895.0,conda-forge/napari-imsmicrolink/0.1.7/noarch/napari-imsmicrolink-0.1.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-imsmicrolink/0.1.7/noarch/napari-imsmicrolink-0.1.7-pyhd8ed1ab_0.tar.bz2,conda,0.1.7,conda-forge,['main'],conda,noarch/napari-imsmicrolink-0.1.8-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['aicsimageio', 'bioformats_jar', 'czifile', 'dask-core', 'h5py', 'imagecodecs', 'lxml', 'napari', 'napari-plugin-engine', 'numpy', 'ome-types', 'opencv', 'pandas', 'pint', 'python >=3.7', 'qtpy', 'simpleitk', 'superqt', 'tifffile', 'zarr >=2.10.3']",MIT,python,1669400049288.0,2022-11-25 18:17:05.888000+00:00,68d05f1af65b69363e454085621b27e2,a8aaeb03d4c607ae5467948cb9f4dcc7046ffb4b36e00c6a97e9309877f6d0f6,40723.0,conda-forge/napari-imsmicrolink/0.1.8/noarch/napari-imsmicrolink-0.1.8-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-imsmicrolink/0.1.8/noarch/napari-imsmicrolink-0.1.8-pyhd8ed1ab_0.conda,conda,0.1.8,conda-forge,['main'],,,,,,,,,,,napari-imsmicrolink.IMSMicroLink,IMS MicroLink,False,,,,,,,,,,,,,,,,,,,,,,,0.1.9,conda-forge/napari-imsmicrolink/0.1.9,,,,,conda,noarch/napari-imsmicrolink-0.1.9-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['aicsimageio', 'bioformats_jar', 'czifile', 'dask-core', 'h5py', 'imagecodecs', 'lxml', 'napari', 'napari-plugin-engine', 'numpy', 'ome-types', 'opencv', 'pandas', 'pint', 'python >=3.7', 'qtpy', 'simpleitk', 'superqt', 'tifffile', 'zarr >=2.10.3']",noarch,1682254411440.0,None-any-None,pyhd8ed1ab_0,2023-04-23 12:59:09.403000+00:00,fa4606d7e935bd43935f224fa0670bf1,637cb40eb08edec7d54d4af3b029d72b4a13cc6d0784e8ef6e56c482747716af,42351.0,conda-forge/napari-imsmicrolink/0.1.9/noarch/napari-imsmicrolink-0.1.9-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-imsmicrolink/0.1.9/noarch/napari-imsmicrolink-0.1.9-pyhd8ed1ab_0.conda,conda,0.1.9,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -194,napari-indices,0.0.2,indices,Calculer les indices de végétation,Emmanuella OKAFOR,BSD-3-Clause,https://github.com/Emmanulla0/napari-indices,65739a4553aa0bc5b69c9635,['conda'],,https://pypi.org/project/napari-indices,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-indices,http://api.anaconda.org/packages/conda-forge/napari-indices,http://anaconda.org/conda-forge/napari-indices,['0.0.2'],0.0.2,0.0.2,['noarch'],3.0,,['pyh9208f05_0'],0.0.2,conda-forge/napari-indices/0.0.2,1.0,0.0,2023-12-08 22:35:46.976000+00:00,2023-12-08 22:35:49.784000+00:00,conda,noarch/napari-indices-0.0.2-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'spectral', 'tifffile']",noarch,1702074779535.0,None-any-None,pyh9208f05_0,2023-12-08 22:35:47.370000+00:00,80624734eeb0ed6f041c6cb0a937fb15,e31392fd71eaad47106719842f23f0da7dcb3861e6c8053fce9ef40328269358,18161.0,conda-forge/napari-indices/0.0.2/noarch/napari-indices-0.0.2-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-indices/0.0.2/noarch/napari-indices-0.0.2-pyh9208f05_0.conda,conda,0.0.2,conda-forge,['main'],public,,0.2.1,napari-indices.get_reader,Open data with indices,napari_indices._reader:napari_get_reader,napari-indices.get_reader,['*.npy'],False,2.1,napari-indices,0.0.2,,Calculer les indices de végétation,"# napari-indices +",text/markdown,https://github.com/nhpatterson/napari-imsmicrolink,Nathan Heath Patterson,heath.patterson@vanderbilt.edu,MIT,"['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['numpy', 'tifffile', 'dask', 'zarr (>=2.10.3)', 'qtpy', 'aicsimageio[bioformats]', 'bioformats-jar', 'SimpleITK', 'pandas', 'h5py', 'opencv-python', 'czifile', 'imagecodecs', 'napari[all]']",>=3.8,"['Bug Tracker, https://github.com/nhpatterson/napari-imsmicrolink/issues', 'Documentation, https://github.com/nhpatterson/napari-imsmicrolink#README.md', 'Source Code, https://github.com/nhpatterson/napari-imsmicrolink', 'User Support, https://github.com/nhpatterson/napari-imsmicrolink/issues']",,False,0.1.5.2,conda-forge/napari-imsmicrolink/0.1.5.2,0.1.7,conda-forge/napari-imsmicrolink/0.1.7,0.1.8,conda-forge/napari-imsmicrolink/0.1.8,conda,noarch/napari-imsmicrolink-0.1.5.2-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['aicsimageio', 'bioformats_jar', 'czifile', 'dask-core', 'h5py', 'imagecodecs', 'napari', 'napari-plugin-engine', 'numpy', 'opencv', 'pandas', 'python >=3.7', 'qtpy', 'simpleitk', 'tifffile', 'zarr >=2.10.3']",pyhd8ed1ab_0,1644334556246.0,None-any-None,noarch,2022-02-08 15:47:39.712000+00:00,dabe3eace7836e78cb6f7e019a10894a,None,38766.0,conda-forge/napari-imsmicrolink/0.1.5.2/noarch/napari-imsmicrolink-0.1.5.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-imsmicrolink/0.1.5.2/noarch/napari-imsmicrolink-0.1.5.2-pyhd8ed1ab_0.tar.bz2,conda,0.1.5.2,conda-forge,['main'],conda,noarch/napari-imsmicrolink-0.1.7-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['aicsimageio', 'bioformats_jar', 'czifile', 'dask-core', 'h5py', 'imagecodecs', 'napari', 'napari-plugin-engine', 'numpy', 'opencv', 'pandas', 'python >=3.7', 'qtpy', 'simpleitk', 'tifffile', 'zarr >=2.10.3']",noarch,1652303144779.0,None-any-None,pyhd8ed1ab_0,2022-05-11 21:19:13.483000+00:00,4bb755a3fc84b2cd26996fcc9d95ccba,None,38895.0,conda-forge/napari-imsmicrolink/0.1.7/noarch/napari-imsmicrolink-0.1.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-imsmicrolink/0.1.7/noarch/napari-imsmicrolink-0.1.7-pyhd8ed1ab_0.tar.bz2,conda,0.1.7,conda-forge,['main'],conda,noarch/napari-imsmicrolink-0.1.8-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['aicsimageio', 'bioformats_jar', 'czifile', 'dask-core', 'h5py', 'imagecodecs', 'lxml', 'napari', 'napari-plugin-engine', 'numpy', 'ome-types', 'opencv', 'pandas', 'pint', 'python >=3.7', 'qtpy', 'simpleitk', 'superqt', 'tifffile', 'zarr >=2.10.3']",MIT,python,1669400049288.0,2022-11-25 18:17:05.888000+00:00,68d05f1af65b69363e454085621b27e2,a8aaeb03d4c607ae5467948cb9f4dcc7046ffb4b36e00c6a97e9309877f6d0f6,40723.0,conda-forge/napari-imsmicrolink/0.1.8/noarch/napari-imsmicrolink-0.1.8-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-imsmicrolink/0.1.8/noarch/napari-imsmicrolink-0.1.8-pyhd8ed1ab_0.conda,conda,0.1.8,conda-forge,['main'],,,,,,,,,,,napari-imsmicrolink.IMSMicroLink,IMS MicroLink,False,,,,,,,,,,,,,,,,,,,,,,,0.1.9,conda-forge/napari-imsmicrolink/0.1.9,,,,,conda,noarch/napari-imsmicrolink-0.1.9-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['aicsimageio', 'bioformats_jar', 'czifile', 'dask-core', 'h5py', 'imagecodecs', 'lxml', 'napari', 'napari-plugin-engine', 'numpy', 'ome-types', 'opencv', 'pandas', 'pint', 'python >=3.7', 'qtpy', 'simpleitk', 'superqt', 'tifffile', 'zarr >=2.10.3']",noarch,1682254411440.0,None-any-None,pyhd8ed1ab_0,2023-04-23 12:59:09.403000+00:00,fa4606d7e935bd43935f224fa0670bf1,637cb40eb08edec7d54d4af3b029d72b4a13cc6d0784e8ef6e56c482747716af,42351.0,conda-forge/napari-imsmicrolink/0.1.9/noarch/napari-imsmicrolink-0.1.9-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-imsmicrolink/0.1.9/noarch/napari-imsmicrolink-0.1.9-pyhd8ed1ab_0.conda,conda,0.1.9,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +204,napari-indices,0.0.2,indices,Calculer les indices de végétation,Emmanuella OKAFOR,BSD-3-Clause,https://github.com/Emmanulla0/napari-indices,65739a4553aa0bc5b69c9635,['conda'],,https://pypi.org/project/napari-indices,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-indices,http://api.anaconda.org/packages/conda-forge/napari-indices,http://anaconda.org/conda-forge/napari-indices,['0.0.2'],0.0.2,0.0.2,['noarch'],3.0,,['pyh9208f05_0'],0.0.2,conda-forge/napari-indices/0.0.2,1.0,0.0,2023-12-08 22:35:46.976000+00:00,2023-12-08 22:35:49.784000+00:00,conda,noarch/napari-indices-0.0.2-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'spectral', 'tifffile']",noarch,1702074779535.0,None-any-None,pyh9208f05_0,2023-12-08 22:35:47.370000+00:00,80624734eeb0ed6f041c6cb0a937fb15,e31392fd71eaad47106719842f23f0da7dcb3861e6c8053fce9ef40328269358,18161.0,conda-forge/napari-indices/0.0.2/noarch/napari-indices-0.0.2-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-indices/0.0.2/noarch/napari-indices-0.0.2-pyh9208f05_0.conda,conda,0.0.2,conda-forge,['main'],public,,0.2.1,napari-indices.get_reader,Open data with indices,napari_indices._reader:napari_get_reader,napari-indices.get_reader,['*.npy'],False,2.1,napari-indices,0.0.2,,Calculer les indices de végétation,"# napari-indices [![License BSD-3](https://img.shields.io/pypi/l/napari-indices.svg?color=green)](https://github.com/Emmanulla0/napari-indices/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-indices.svg?color=green)](https://pypi.org/project/napari-indices) @@ -20523,8 +21554,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/Emmanulla0/napari-indices,Emmanuella OKAFOR,eokafor010@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'spectral', 'matplotlib', 'tifffile', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/Emmanulla0/napari-indices/issues', 'Documentation, https://github.com/Emmanulla0/napari-indices#README.md', 'Source Code, https://github.com/Emmanulla0/napari-indices', 'User Support, https://github.com/Emmanulla0/napari-indices/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-indices.write_multiple,Save multi-layer data with indices,napari_indices._writer:write_multiple,napari-indices.write_single_image,Save image data with indices,napari_indices._writer:write_single_image,napari-indices.make_sample_data,Load sample data from indices,napari_indices._sample_data:make_sample_data,napari-indices.make_qwidget,Example QWidget,False,napari-indices.make_magic_widget,Vegetation indices,False,,,,,,,napari-indices.make_qwidget,Make example QWidget,napari_indices._widget:ExampleQWidget,napari-indices.write_multiple,"['image*', 'labels*']",,napari-indices.write_single_image,['image'],['.npy'],,napari-indices.make_sample_data,unique_id.1,indices,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-indices.make_magic_widget,Calculate indice,napari_indices._widget:calculate_indice,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -195,napari-input-visualizer,0.0.1,Input Visualizer,Visualize keyboard and mouse button presses,David Bauer,BSD-3-Clause,https://github.com/bauerdavid/napari-input-visualizer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-input-visualizer.input_visualizer_widget,Make InputVisualizerWidget,napari_input_visualizer._widget:InputVisualizerWidget,,,,2.1,napari-input-visualizer,0.0.1,,Visualize keyboard and mouse button presses,"# napari-input-visualizer +",text/markdown,https://github.com/Emmanulla0/napari-indices,Emmanuella OKAFOR,eokafor010@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'spectral', 'matplotlib', 'tifffile', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/Emmanulla0/napari-indices/issues', 'Documentation, https://github.com/Emmanulla0/napari-indices#README.md', 'Source Code, https://github.com/Emmanulla0/napari-indices', 'User Support, https://github.com/Emmanulla0/napari-indices/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-indices.write_multiple,Save multi-layer data with indices,napari_indices._writer:write_multiple,napari-indices.write_single_image,Save image data with indices,napari_indices._writer:write_single_image,napari-indices.make_sample_data,Load sample data from indices,napari_indices._sample_data:make_sample_data,napari-indices.make_qwidget,Example QWidget,False,napari-indices.make_magic_widget,Vegetation indices,False,,,,,,,napari-indices.make_qwidget,Make example QWidget,napari_indices._widget:ExampleQWidget,napari-indices.write_multiple,"['image*', 'labels*']",,napari-indices.write_single_image,['image'],['.npy'],,napari-indices.make_sample_data,unique_id.1,indices,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-indices.make_magic_widget,Calculate indice,napari_indices._widget:calculate_indice,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +205,napari-input-visualizer,0.0.1,Input Visualizer,Visualize keyboard and mouse button presses,David Bauer,BSD-3-Clause,https://github.com/bauerdavid/napari-input-visualizer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-input-visualizer.input_visualizer_widget,Make InputVisualizerWidget,napari_input_visualizer._widget:InputVisualizerWidget,,,,2.1,napari-input-visualizer,0.0.1,,Visualize keyboard and mouse button presses,"# napari-input-visualizer [![License BSD-3](https://img.shields.io/pypi/l/napari-input-visualizer.svg?color=green)](https://github.com/bauerdavid/napari-input-visualizer/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-input-visualizer.svg?color=green)](https://pypi.org/project/napari-input-visualizer) @@ -20599,8 +21630,146 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/bauerdavid/napari-input-visualizer,David Bauer,dbauer@brc.hu,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'napari', 'imageio-ffmpeg', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/bauerdavid/napari-input-visualizer/issues', 'Documentation, https://github.com/bauerdavid/napari-input-visualizer#README.md', 'Source Code, https://github.com/bauerdavid/napari-input-visualizer', 'User Support, https://github.com/bauerdavid/napari-input-visualizer/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-input-visualizer.input_visualizer_widget,Input Visualizer,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -196,napari-IP-workflow,0.0.3,Image Processing Workflow,"A plugin to do image preprocessing, segmentation, and measurements on other images.",Jay Unruh,GPL-3.0-only,https://github.com/jayunruh/napari-IP-workflow,62c53c8ba9b86c6f9b7c67ef,['conda'],,https://github.com/jayunruh/napari-IP-workflow,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-ip-workflow,http://api.anaconda.org/packages/conda-forge/napari-ip-workflow,http://anaconda.org/conda-forge/napari-ip-workflow,['0.0.3'],0.0.3,0.0.3,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.3,conda-forge/napari-ip-workflow/0.0.3,1.0,0.0,2022-07-06 07:40:57.560000+00:00,2023-06-18 08:42:02.053000+00:00,conda,noarch/napari-ip-workflow-0.0.3-pyhd8ed1ab_0.tar.bz2,0.0,GPL-3.0-or-later,False,python,"['magicgui', 'napari', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image']",noarch,1657093137110.0,None-any-None,pyhd8ed1ab_0,2022-07-06 07:40:57.945000+00:00,db4cb1a0c4ae7a51415f0b0d4c1e1eea,None,26396.0,conda-forge/napari-ip-workflow/0.0.3/noarch/napari-ip-workflow-0.0.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-ip-workflow/0.0.3/noarch/napari-ip-workflow-0.0.3-pyhd8ed1ab_0.tar.bz2,conda,0.0.3,conda-forge,['main'],public,,0.2.1,napari-IP-workflow.segwidget,Make Segmentation Widget,napari_ip_workflow.segwidget:makeSegWidget,,,,2.1,napari-IP-workflow,0.0.3,,"A plugin to do image preprocessing, segmentation, and measurements on other images.","# napari-IP-workflow +",text/markdown,https://github.com/bauerdavid/napari-input-visualizer,David Bauer,dbauer@brc.hu,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'napari', 'imageio-ffmpeg', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/bauerdavid/napari-input-visualizer/issues', 'Documentation, https://github.com/bauerdavid/napari-input-visualizer#README.md', 'Source Code, https://github.com/bauerdavid/napari-input-visualizer', 'User Support, https://github.com/bauerdavid/napari-input-visualizer/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-input-visualizer.input_visualizer_widget,Input Visualizer,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +206,napari-intensity-plotter,0.1.6,Intensity Plotter,A plugin for plotting intensity profiles with control features in napari.,Toranosuke Takagi," +Copyright (c) 2024, Toranosuke Takagi +All rights reserved. + +Redistribution and use in source and binary forms, with or without +modification, are permitted provided that the following conditions are met: + +* Redistributions of source code must retain the above copyright notice, this + list of conditions and the following disclaimer. + +* Redistributions in binary form must reproduce the above copyright notice, + this list of conditions and the following disclaimer in the documentation + and/or other materials provided with the distribution. + +* Neither the name of copyright holder nor the names of its + contributors may be used to endorse or promote products derived from + this software without specific prior written permission. + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ""AS IS"" +AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE +IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE +DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE +FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL +DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR +SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER +CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, +OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE +OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. +",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-intensity-plotter.IntensityPlotWidget,Intensity Plot,napari_intensity_plotter._widget:IntensityPlotWidget,,,,2.1,napari-intensity-plotter,0.1.6,,A plugin for plotting intensity profiles with control features in napari.,"# napari-intensity-plotter + +[![License BSD-3](https://img.shields.io/pypi/l/napari-intensity-plotter.svg?color=green)](https://github.com/Tbrn1103/napari-intensity-plotter/raw/main/LICENSE) +[![PyPI](https://img.shields.io/pypi/v/napari-intensity-plotter.svg?color=green)](https://pypi.org/project/napari-intensity-plotter) +[![Python Version](https://img.shields.io/pypi/pyversions/napari-intensity-plotter.svg?color=green)](https://python.org) +[![tests](https://github.com/Tbrn1103/napari-intensity-plotter/workflows/tests/badge.svg)](https://github.com/Tbrn1103/napari-intensity-plotter/actions) +[![codecov](https://codecov.io/gh/Tbrn1103/napari-intensity-plotter/branch/main/graph/badge.svg)](https://codecov.io/gh/Tbrn1103/napari-intensity-plotter) +[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-intensity-plotter)](https://napari-hub.org/plugins/napari-intensity-plotter) + +# napari-intensity-plotter + +**napari-intensity-plotter** is a plugin for **[napari](https://napari.org)** that provides tools to measure and plot intensity profiles in 2D time-series images. + +![Intensity Plot Widget](images/intensity_plot_widget_example.png) + +*Screenshot: Intensity profile of a region of interest in a 2D time-series image.* + +## Features + +- **Intensity Plot Widget**: Allows you to select a region of interest in a 2D time-series image and plot the intensity profile over time. +- **Intensity Plot Control Widget**: Lets you fine-tune plot parameters and save the results as CSV or PNG files. + +## Installation + +You can install `napari-intensity-plotter` via pip: + +```bash +pip install napari-intensity-plotter +``` + +Alternatively, you can install it directly from the napari plugin interface. + +### Usage + +1. **Load a 2D Time-Series Image** + Load a 2D time-series image (e.g., fluorescence microscopy data) in napari. + +2. **Activate the Widgets** + Open the `Intensity Plot Widget` and `Intensity Plot Control Widget` from the `Plugins` menu in napari. + +3. **Intensity Plot Widget** + - Move your mouse over the image, or click on a specific location to plot the intensity profile of the selected region across slices (e.g., time). + - The region of interest (ROI) size can be adjusted using the square size setting in the control widget. + +4. **Intensity Plot Control Widget** + - Configure the square size for the ROI (ensures that the region size remains odd). + - Set the directory to save plots and intensity data. + - Save the intensity profile as a `.csv` or `.png` file by clicking the corresponding buttons or using keyboard shortcuts (`Ctrl+S`). + +5. **Additional Controls** + - Hide all layers using the `Hide All Layers` button or `Ctrl+D`. + - Use the rectangle to visualize the selected ROI. + +### Example Workflow + +**Step 1**: Load a 2D time-series image (e.g., `tif` or `nd2`) into napari. Ensure the layer is visible. + +**Step 2**: Open the `Intensity Plot Widget` to visualize intensity changes over time or slices for a specific ROI. + +**Step 3**: Use the `Intensity Plot Control Widget` to: +- Adjust the square size for the ROI. +- Specify a directory to save intensity data. +- Enable saving in CSV or PNG formats. + +**Step 4**: Save the plotted intensity data by clicking `Save to CSV/PNG` or pressing `Ctrl+S`. + +**Step 5**: Hide all layers if necessary using `Hide All Layers` or `Ctrl+D`. + +## Contributing + +Contributions are welcome! If you encounter issues or have ideas for new features, please submit them via the [GitHub Issues](https://github.com/Tbrn1103/napari-intensity-plotter/issues). + +## Acknowledgements + +This plugin was developed using the **napari plugin cookiecutter template**, which greatly streamlined the creation of this tool. See the [cookiecutter-napari-plugin](https://github.com/napari/cookiecutter-napari-plugin) for more details. + +Special thanks to the napari community for their continuous support and resources. + +## License + +This project is licensed under the BSD 3-Clause License. See the [LICENSE](LICENSE) file for details. +",text/markdown,,Toranosuke Takagi,toranporin_1224@yahoo.co.jp," +Copyright (c) 2024, Toranosuke Takagi +All rights reserved. + +Redistribution and use in source and binary forms, with or without +modification, are permitted provided that the following conditions are met: + +* Redistributions of source code must retain the above copyright notice, this + list of conditions and the following disclaimer. + +* Redistributions in binary form must reproduce the above copyright notice, + this list of conditions and the following disclaimer in the documentation + and/or other materials provided with the distribution. + +* Neither the name of copyright holder nor the names of its + contributors may be used to endorse or promote products derived from + this software without specific prior written permission. + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ""AS IS"" +AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE +IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE +DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE +FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL +DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR +SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER +CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, +OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE +OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""', 'pyqtgraph; extra == ""testing""']",>=3.9,"['Bug Tracker, https://github.com/Tbrn1103/napari-intensity-plotter/issues', 'Documentation, https://github.com/Tbrn1103/napari-intensity-plotter#README.md', 'Source Code, https://github.com/Tbrn1103/napari-intensity-plotter', 'User Support, https://github.com/Tbrn1103/napari-intensity-plotter/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",napari-intensity-plotter.IntensityPlotControlWidget,Intensity Plot Control,napari_intensity_plotter._widget:IntensityPlotControlWidget,,,,,,,napari-intensity-plotter.IntensityPlotWidget,Intensity Plot,False,napari-intensity-plotter.IntensityPlotControlWidget,Intensity Plot Control,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +207,napari-IP-workflow,0.0.3,Image Processing Workflow,"A plugin to do image preprocessing, segmentation, and measurements on other images.",Jay Unruh,GPL-3.0-only,https://github.com/jayunruh/napari-IP-workflow,62c53c8ba9b86c6f9b7c67ef,['conda'],,https://github.com/jayunruh/napari-IP-workflow,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-ip-workflow,http://api.anaconda.org/packages/conda-forge/napari-ip-workflow,http://anaconda.org/conda-forge/napari-ip-workflow,['0.0.3'],0.0.3,0.0.3,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.3,conda-forge/napari-ip-workflow/0.0.3,1.0,0.0,2022-07-06 07:40:57.560000+00:00,2023-06-18 08:42:02.053000+00:00,conda,noarch/napari-ip-workflow-0.0.3-pyhd8ed1ab_0.tar.bz2,0.0,GPL-3.0-or-later,False,python,"['magicgui', 'napari', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image']",noarch,1657093137110.0,None-any-None,pyhd8ed1ab_0,2022-07-06 07:40:57.945000+00:00,db4cb1a0c4ae7a51415f0b0d4c1e1eea,None,26396.0,conda-forge/napari-ip-workflow/0.0.3/noarch/napari-ip-workflow-0.0.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-ip-workflow/0.0.3/noarch/napari-ip-workflow-0.0.3-pyhd8ed1ab_0.tar.bz2,conda,0.0.3,conda-forge,['main'],public,,0.2.1,napari-IP-workflow.segwidget,Make Segmentation Widget,napari_ip_workflow.segwidget:makeSegWidget,,,,2.1,napari-IP-workflow,0.0.3,,"A plugin to do image preprocessing, segmentation, and measurements on other images.","# napari-IP-workflow [![License](https://img.shields.io/pypi/l/napari-IP-workflow.svg?color=green)](https://github.com/jayunruh/napari-IP-workflow/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-IP-workflow.svg?color=green)](https://pypi.org/project/napari-IP-workflow) @@ -20679,8 +21848,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/jayunruh/napari-IP-workflow,Jay Unruh,jru@stowers.org,GPL-3.0-only,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']","['numpy', 'magicgui', 'qtpy', 'pandas', 'skimage', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/jayunruh/napari-IP-workflow/issues', 'Documentation, https://github.com/jayunruh/napari-IP-workflow#README.md', 'Source Code, https://github.com/jayunruh/napari-IP-workflow', 'User Support, https://github.com/jayunruh/napari-IP-workflow/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-ip-workflow.segwidget,Make Segmentation Widget,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -197,napari-ISM,1.0.7,Napari-ISM,A Napari plugin for analysing and simulating ISM images,Alessandro Zunino,,https://github.com/VicidominiLab/napari-ISM,62ab62fbb58365e4ade0e946,['conda'],,https://github.com/VicidominiLab/napari-ISM,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-ism,http://api.anaconda.org/packages/conda-forge/napari-ism,http://anaconda.org/conda-forge/napari-ism,"['0.1.0', '0.1.1', '1.0.4', '1.0.5', '1.0.7']",1.0.4,1.0.7,['noarch'],7.0,https://github.com/VicidominiLab/napari-ISM,['pyhd8ed1ab_0'],0.1.0,conda-forge/napari-ism/0.1.0,1.0,0.0,2022-06-16 17:06:00.662000+00:00,2023-09-07 17:35:39.528000+00:00,conda,noarch/napari-ism-0.1.0-pyhd8ed1ab_0.tar.bz2,0.0,LGPL-3.0-only,False,python,"['h5py', 'magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image', 'scipy']",noarch,1655398987302.0,None-any-None,pyhd8ed1ab_0,2022-06-16 17:06:01.240000+00:00,09d4439f472265a0fc807954c1a1f20c,None,15382.0,conda-forge/napari-ism/0.1.0/noarch/napari-ism-0.1.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-ism/0.1.0/noarch/napari-ism-0.1.0-pyhd8ed1ab_0.tar.bz2,conda,0.1.0,conda-forge,['main'],public,,0.2.1,napari-ISM.get_reader,Open data with Adaptive Pixel Reassignment,napari_ism._reader:napari_get_reader,napari-ISM.get_reader,"['*.npy', '*.h5']",False,2.1,napari-ISM,1.0.7,,A Napari plugin for analysing and simulating ISM images,"# napari-ISM +",text/markdown,https://github.com/jayunruh/napari-IP-workflow,Jay Unruh,jru@stowers.org,GPL-3.0-only,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']","['numpy', 'magicgui', 'qtpy', 'pandas', 'skimage', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/jayunruh/napari-IP-workflow/issues', 'Documentation, https://github.com/jayunruh/napari-IP-workflow#README.md', 'Source Code, https://github.com/jayunruh/napari-IP-workflow', 'User Support, https://github.com/jayunruh/napari-IP-workflow/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-ip-workflow.segwidget,Make Segmentation Widget,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +208,napari-ISM,1.0.7,Napari-ISM,A Napari plugin for analysing and simulating ISM images,Alessandro Zunino,,https://github.com/VicidominiLab/napari-ISM,62ab62fbb58365e4ade0e946,['conda'],,https://github.com/VicidominiLab/napari-ISM,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-ism,http://api.anaconda.org/packages/conda-forge/napari-ism,http://anaconda.org/conda-forge/napari-ism,"['0.1.0', '0.1.1', '1.0.4', '1.0.5', '1.0.7']",1.0.4,1.0.7,['noarch'],7.0,https://github.com/VicidominiLab/napari-ISM,['pyhd8ed1ab_0'],0.1.0,conda-forge/napari-ism/0.1.0,1.0,0.0,2022-06-16 17:06:00.662000+00:00,2023-09-07 17:35:39.528000+00:00,conda,noarch/napari-ism-0.1.0-pyhd8ed1ab_0.tar.bz2,0.0,LGPL-3.0-only,False,python,"['h5py', 'magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image', 'scipy']",noarch,1655398987302.0,None-any-None,pyhd8ed1ab_0,2022-06-16 17:06:01.240000+00:00,09d4439f472265a0fc807954c1a1f20c,None,15382.0,conda-forge/napari-ism/0.1.0/noarch/napari-ism-0.1.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-ism/0.1.0/noarch/napari-ism-0.1.0-pyhd8ed1ab_0.tar.bz2,conda,0.1.0,conda-forge,['main'],public,,0.2.1,napari-ISM.get_reader,Open data with Adaptive Pixel Reassignment,napari_ism._reader:napari_get_reader,napari-ISM.get_reader,"['*.npy', '*.h5']",False,2.1,napari-ISM,1.0.7,,A Napari plugin for analysing and simulating ISM images,"# napari-ISM [![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-ISM)](https://napari-hub.org/plugins/napari-ISM) [![License](https://img.shields.io/pypi/l/napari-ISM.svg?color=green)](https://github.com/VicidominiLab/napari-ISM/raw/main/LICENSE) @@ -20816,8 +21985,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [BrightEyes-ISM]: https://github.com/VicidominiLab/BrightEyes-ISM [MCS software]: https://github.com/VicidominiLab/BrightEyes-MCS -",text/markdown,https://github.com/VicidominiLab/napari-ISM,Alessandro Zunino,Alessandro Zunino ,,"['Framework :: napari', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 or later (GPLv3+)']","['numpy', 'scipy', 'h5py', 'PyQt5', 'brighteyes-ism >=1.2.2', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.7,"['Homepage, https://github.com/VicidominiLab/napari-ism', 'Documentation, https://brighteyes-ism.readthedocs.io']",['testing'],False,0.1.1,conda-forge/napari-ism/0.1.1,1.0.4,conda-forge/napari-ism/1.0.4,1.0.5,conda-forge/napari-ism/1.0.5,conda,noarch/napari-ism-0.1.1-pyhd8ed1ab_0.tar.bz2,0.0,LGPL-3.0-only,False,python,"['h5py', 'magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image', 'scipy']",pyhd8ed1ab_0,1666573478969.0,None-any-None,noarch,2022-10-24 01:07:10.105000+00:00,43142c495365a415bb1608d55021ca8e,None,16247.0,conda-forge/napari-ism/0.1.1/noarch/napari-ism-0.1.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-ism/0.1.1/noarch/napari-ism-0.1.1-pyhd8ed1ab_0.tar.bz2,conda,0.1.1,conda-forge,['main'],conda,noarch/napari-ism-1.0.4-pyhd8ed1ab_0.conda,0.0,LGPL-3.0-only,False,python,"['brighteyes-ism', 'h5py', 'magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image', 'scipy']",noarch,1683056231725.0,None-any-None,pyhd8ed1ab_0,2023-05-02 19:39:42.272000+00:00,b433a66a0924fbfe0369c9b88ee0f473,951cc88b00737d63846f62f0ba08aa9fcefb7e4ea444b6fe2d845ff282cd658f,27211.0,conda-forge/napari-ism/1.0.4/noarch/napari-ism-1.0.4-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-ism/1.0.4/noarch/napari-ism-1.0.4-pyhd8ed1ab_0.conda,conda,1.0.4,conda-forge,['main'],conda,noarch/napari-ism-1.0.5-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['brighteyes-ism >=1.2.0', 'h5py', 'magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image', 'scipy']",LGPL-3.0-only,python,1690556613838.0,2023-07-28 15:06:19.139000+00:00,6e638500ac7bd8a8c6dfae6e170d672a,2e7e9dec55c1d6b47f14ad7bb84933fcbf98c4a5b5a7a73cac7c4fa5081a901c,26299.0,conda-forge/napari-ism/1.0.5/noarch/napari-ism-1.0.5-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-ism/1.0.5/noarch/napari-ism-1.0.5-pyhd8ed1ab_0.conda,conda,1.0.5,conda-forge,['main'],,napari-ISM.write_multiple,Save multi-layer data with Adaptive Pixel Reassignment,napari_ism._writer:write_multiple,napari-ISM.write_single_image,Save image data with Adaptive Pixel Reassignment,napari_ism._writer:write_single_image,napari-ISM.make_sample_data,Load sample data from Adaptive Pixel Reassignment,napari_ism._sample_data:make_sample_data,napari-ISM.APR_stack,APR_stack,True,napari-ISM.Fingerprint,Fingerprint,True,napari-ISM.SumSPAD,Sum,True,napari-ISM.MultiImgDeconvolution,Deconvolution,True,napari-ISM.APR_stack,Calculate adaptive pixel reassignment on a single dataset or a z-stack,napari_ism._widget:APR_stack,napari-ISM.write_multiple,"['image*', 'labels*']",,napari-ISM.write_single_image,['image'],"['.npy', '.h5']",,napari-ISM.make_sample_data,unique_id.1,ISM dataset,1.0.7,conda-forge/napari-ism/1.0.7,,,,,conda,noarch/napari-ism-1.0.7-pyhd8ed1ab_0.conda,0.0,LGPL-3.0-only,False,python,"['brighteyes-ism >=1.2.2', 'h5py', 'magicgui', 'matplotlib-base', 'napari', 'napari-plugin-engine', 'numpy', 'python >=3.8', 'qtpy', 'scipy']",noarch,1694107990415.0,None-any-None,pyhd8ed1ab_0,2023-09-07 17:35:37.657000+00:00,24189a65963340d238c2ebe51168d069,9454c2b53517a1ab726561c98a1fe05443f3c341fd9cd6961376a912411a8aec,26891.0,conda-forge/napari-ism/1.0.7/noarch/napari-ism-1.0.7-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-ism/1.0.7/noarch/napari-ism-1.0.7-pyhd8ed1ab_0.conda,conda,1.0.7,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-ISM.Fingerprint,Calculate the fingeprint of a dataset,napari_ism._widget:Fingerprint,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-ISM.SumSPAD,Generate an image by summing all the channels,napari_ism._widget:SumSPAD,napari-ISM.MultiImgDeconvolution,Perform multi-image deconvolution,napari_ism._widget:MultiImgDeconvolution,napari-ISM.SimulatePSFs,Simulate a dataset of PSFs,napari_ism._widget:SimulatePSFs,napari-ISM.integrateDims,Sum the dataset along the specified dimensions,napari_ism._widget:integrateDims,napari-ISM.Focus_ISM,Apply focus-ISM on a single dataset,napari_ism._widget:Focus_ISM,napari-ISM.FRC,"Calculate the FRC curve and resolution from a 3D image (x,y,t)",napari_ism._widget:FRC,,napari-ISM.SimulatePSFs,PSFs,True,napari-ISM.integrateDims,integrateDims,True,napari-ISM.Focus_ISM,Focus_ISM,True,napari-ISM.FRC,FRC,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -198,napari-itk-io,0.3.0,napari-itk-io,File IO with itk for napari,Matt McCormick,Apache-2.0,https://github.com/InsightSoftwareConsortium/napari-itk-io,6246e87927bdd9a91c774cfb,['conda'],,https://github.com/InsightSoftwareConsortium/napari-itk-io,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-itk-io,http://api.anaconda.org/packages/conda-forge/napari-itk-io,http://anaconda.org/conda-forge/napari-itk-io,"['0.1.0', '0.2.0', '0.3.0']",0.2.0,0.3.0,['noarch'],5.0,,['pyhd8ed1ab_0'],0.1.0,conda-forge/napari-itk-io/0.1.0,1.0,0.0,2022-04-01 11:56:39.291000+00:00,2023-07-26 00:44:23.331000+00:00,conda,noarch/napari-itk-io-0.1.0-pyhd8ed1ab_0.tar.bz2,0.0,Apache-2.0,False,python,"['itk >=5.2.0', 'itk-napari-conversion', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.6']",noarch,1648814014324.0,None-any-None,pyhd8ed1ab_0,2022-04-01 11:56:39.700000+00:00,27fbdd7d2c832de3479b0861c9cdbe01,None,15118.0,conda-forge/napari-itk-io/0.1.0/noarch/napari-itk-io-0.1.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-itk-io/0.1.0/noarch/napari-itk-io-0.1.0-pyhd8ed1ab_0.tar.bz2,conda,0.1.0,conda-forge,['main'],public,,0.2.1,napari-itk-io.get_reader,Open data with napari-itk-io,napari_itk_io._reader:napari_get_reader,napari-itk-io.get_reader,['*'],True,2.1,napari-itk-io,0.3.0,,File IO with itk for napari,"# napari-itk-io +",text/markdown,https://github.com/VicidominiLab/napari-ISM,Alessandro Zunino,Alessandro Zunino ,,"['Framework :: napari', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 or later (GPLv3+)']","['numpy', 'scipy', 'h5py', 'PyQt5', 'brighteyes-ism >=1.2.2', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.7,"['Homepage, https://github.com/VicidominiLab/napari-ism', 'Documentation, https://brighteyes-ism.readthedocs.io']",['testing'],False,0.1.1,conda-forge/napari-ism/0.1.1,1.0.4,conda-forge/napari-ism/1.0.4,1.0.5,conda-forge/napari-ism/1.0.5,conda,noarch/napari-ism-0.1.1-pyhd8ed1ab_0.tar.bz2,0.0,LGPL-3.0-only,False,python,"['h5py', 'magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image', 'scipy']",pyhd8ed1ab_0,1666573478969.0,None-any-None,noarch,2022-10-24 01:07:10.105000+00:00,43142c495365a415bb1608d55021ca8e,None,16247.0,conda-forge/napari-ism/0.1.1/noarch/napari-ism-0.1.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-ism/0.1.1/noarch/napari-ism-0.1.1-pyhd8ed1ab_0.tar.bz2,conda,0.1.1,conda-forge,['main'],conda,noarch/napari-ism-1.0.4-pyhd8ed1ab_0.conda,0.0,LGPL-3.0-only,False,python,"['brighteyes-ism', 'h5py', 'magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image', 'scipy']",noarch,1683056231725.0,None-any-None,pyhd8ed1ab_0,2023-05-02 19:39:42.272000+00:00,b433a66a0924fbfe0369c9b88ee0f473,951cc88b00737d63846f62f0ba08aa9fcefb7e4ea444b6fe2d845ff282cd658f,27211.0,conda-forge/napari-ism/1.0.4/noarch/napari-ism-1.0.4-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-ism/1.0.4/noarch/napari-ism-1.0.4-pyhd8ed1ab_0.conda,conda,1.0.4,conda-forge,['main'],conda,noarch/napari-ism-1.0.5-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['brighteyes-ism >=1.2.0', 'h5py', 'magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image', 'scipy']",LGPL-3.0-only,python,1690556613838.0,2023-07-28 15:06:19.139000+00:00,6e638500ac7bd8a8c6dfae6e170d672a,2e7e9dec55c1d6b47f14ad7bb84933fcbf98c4a5b5a7a73cac7c4fa5081a901c,26299.0,conda-forge/napari-ism/1.0.5/noarch/napari-ism-1.0.5-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-ism/1.0.5/noarch/napari-ism-1.0.5-pyhd8ed1ab_0.conda,conda,1.0.5,conda-forge,['main'],,napari-ISM.write_multiple,Save multi-layer data with Adaptive Pixel Reassignment,napari_ism._writer:write_multiple,napari-ISM.write_single_image,Save image data with Adaptive Pixel Reassignment,napari_ism._writer:write_single_image,napari-ISM.make_sample_data,Load sample data from Adaptive Pixel Reassignment,napari_ism._sample_data:make_sample_data,napari-ISM.APR_stack,APR_stack,True,napari-ISM.Fingerprint,Fingerprint,True,napari-ISM.SumSPAD,Sum,True,napari-ISM.MultiImgDeconvolution,Deconvolution,True,napari-ISM.APR_stack,Calculate adaptive pixel reassignment on a single dataset or a z-stack,napari_ism._widget:APR_stack,napari-ISM.write_multiple,"['image*', 'labels*']",,napari-ISM.write_single_image,['image'],"['.npy', '.h5']",,napari-ISM.make_sample_data,unique_id.1,ISM dataset,1.0.7,conda-forge/napari-ism/1.0.7,,,,,conda,noarch/napari-ism-1.0.7-pyhd8ed1ab_0.conda,0.0,LGPL-3.0-only,False,python,"['brighteyes-ism >=1.2.2', 'h5py', 'magicgui', 'matplotlib-base', 'napari', 'napari-plugin-engine', 'numpy', 'python >=3.8', 'qtpy', 'scipy']",noarch,1694107990415.0,None-any-None,pyhd8ed1ab_0,2023-09-07 17:35:37.657000+00:00,24189a65963340d238c2ebe51168d069,9454c2b53517a1ab726561c98a1fe05443f3c341fd9cd6961376a912411a8aec,26891.0,conda-forge/napari-ism/1.0.7/noarch/napari-ism-1.0.7-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-ism/1.0.7/noarch/napari-ism-1.0.7-pyhd8ed1ab_0.conda,conda,1.0.7,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-ISM.Fingerprint,Calculate the fingeprint of a dataset,napari_ism._widget:Fingerprint,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-ISM.SumSPAD,Generate an image by summing all the channels,napari_ism._widget:SumSPAD,napari-ISM.MultiImgDeconvolution,Perform multi-image deconvolution,napari_ism._widget:MultiImgDeconvolution,napari-ISM.SimulatePSFs,Simulate a dataset of PSFs,napari_ism._widget:SimulatePSFs,napari-ISM.integrateDims,Sum the dataset along the specified dimensions,napari_ism._widget:integrateDims,napari-ISM.Focus_ISM,Apply focus-ISM on a single dataset,napari_ism._widget:Focus_ISM,,napari-ISM.SimulatePSFs,PSFs,True,napari-ISM.integrateDims,integrateDims,True,napari-ISM.Focus_ISM,Focus_ISM,True,napari-ISM.FRC,FRC,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +209,napari-itk-io,0.4.1,napari-itk-io,File IO with itk for napari,Matt McCormick,Apache-2.0,https://github.com/InsightSoftwareConsortium/napari-itk-io,6246e87927bdd9a91c774cfb,['conda'],,https://github.com/InsightSoftwareConsortium/napari-itk-io,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-itk-io,http://api.anaconda.org/packages/conda-forge/napari-itk-io,http://anaconda.org/conda-forge/napari-itk-io,"['0.1.0', '0.2.0', '0.3.0', '0.4.1']",0.4.1,0.4.1,['noarch'],11.0,,"['pyhd0adb26_0', 'pyhd8ed1ab_0']",0.1.0,conda-forge/napari-itk-io/0.1.0,1.0,0.0,2022-04-01 11:56:39.291000+00:00,2024-11-16 23:17:52.016000+00:00,conda,noarch/napari-itk-io-0.1.0-pyhd8ed1ab_0.tar.bz2,0.0,Apache-2.0,False,python,"['itk >=5.2.0', 'itk-napari-conversion', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.6']",noarch,1648814014324.0,None-any-None,pyhd8ed1ab_0,2022-04-01 11:56:39.700000+00:00,27fbdd7d2c832de3479b0861c9cdbe01,None,15118.0,conda-forge/napari-itk-io/0.1.0/noarch/napari-itk-io-0.1.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-itk-io/0.1.0/noarch/napari-itk-io-0.1.0-pyhd8ed1ab_0.tar.bz2,conda,0.1.0,conda-forge,['main'],public,,0.2.1,napari-itk-io.get_reader,Open data with napari-itk-io,napari_itk_io._reader:napari_get_reader,napari-itk-io.get_reader,"['*.bmp', '*.dcm', '*.dicom', '*.gipl', '*.gipl.gz', '*.h5', '*.hdf5', '*.hdr', '*.jpg', '*.jpeg', '*.lsm', '*.mnc', '*.mnc.gz', '*.mnc2', '*.mgh', '*.mgz', '*.mgh.gz', '*.mha', '*.mhd', '*.mrc', '*.nia', '*.hdr', '*.nhdr', '*.nii', '*.nii.gz', '*.nrrd', '*.pic', '*.png', '*.tif', '*.tiff', '*.vtk']",True,2.1,napari-itk-io,0.4.1,,File IO with itk for napari,"# napari-itk-io [![License](https://img.shields.io/pypi/l/napari-itk-io.svg?color=green)](https://github.com/InsightSoftwareConsortium/napari-itk-io/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-itk-io.svg?color=green)](https://pypi.org/project/napari-itk-io) @@ -20893,8 +22062,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/InsightSoftwareConsortium/napari-itk-io,Matt McCormick,matt.mccormick@kitware.com,Apache-2.0,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: Apache Software License']","['numpy', 'napari-plugin-engine (>=0.2.0)', 'itk-io (>=5.2.0)', 'itk-napari-conversion']",>=3.8,,,False,0.2.0,conda-forge/napari-itk-io/0.2.0,0.3.0,conda-forge/napari-itk-io/0.3.0,,,conda,noarch/napari-itk-io-0.2.0-pyhd8ed1ab_0.tar.bz2,0.0,Apache-2.0,False,python,"['itk >=5.2.0', 'itk-napari-conversion', 'napari-plugin-engine >=0.2.0', 'numpy', 'python >=3.6']",pyhd8ed1ab_0,1648897184038.0,None-any-None,noarch,2022-04-02 11:02:57.627000+00:00,703332692b6e252f91f9e35df1edeef5,None,15607.0,conda-forge/napari-itk-io/0.2.0/noarch/napari-itk-io-0.2.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-itk-io/0.2.0/noarch/napari-itk-io-0.2.0-pyhd8ed1ab_0.tar.bz2,conda,0.2.0,conda-forge,['main'],conda,noarch/napari-itk-io-0.3.0-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['itk >=5.2.0', 'itk-napari-conversion', 'napari', 'napari-plugin-engine >=0.2.0', 'numpy', 'python >=3.8']",noarch,1690332126807.0,None-any-None,pyhd8ed1ab_0,2023-07-26 00:44:21.614000+00:00,cb44e6a21da4991be845dbd637be2b9c,b66f9076b0b0ae8610b1a2d817428a2db0b2e5fce464fa2f89035c0265be6b0f,17077.0,conda-forge/napari-itk-io/0.3.0/noarch/napari-itk-io-0.3.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-itk-io/0.3.0/noarch/napari-itk-io-0.3.0-pyhd8ed1ab_0.conda,conda,0.3.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,napari-itk-io.write_multiple,Save multi-layer data with napari-itk-io,napari_itk_io._writer:write_multiple,napari-itk-io.write_single,Save layer data with napari-itk-io,napari_itk_io._writer:write_single,,,,,,,,,,,,,,,,,,,napari-itk-io.write_multiple,"['image*', 'labels*']",,napari-itk-io.write_single,"['image', 'labels']",['.nii'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -199,napari-J,0.3,napari-J,A plugin to exchange data with FIJI and to use FIJI image analysis from napari,Volker Baecker,MIT,https://github.com/MontpellierRessourcesImagerie/napari-J,62066f4227bdd9a91c87247a,['conda'],,https://github.com/MontpellierRessourcesImagerie/napari-J,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-j,http://api.anaconda.org/packages/conda-forge/napari-j,http://anaconda.org/conda-forge/napari-j,"['0.2.2', '0.2.3', '0.2.4', '0.3']",0.3,0.3,['noarch'],6.0,,['pyhd8ed1ab_0'],0.2.2,conda-forge/napari-j/0.2.2,1.0,0.0,2022-02-11 14:14:24.545000+00:00,2023-06-18 08:40:50.076000+00:00,conda,noarch/napari-j-0.2.2-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['jpype1 >=1.2.1', 'matplotlib-base', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7']",noarch,1644588716930.0,None-any-None,pyhd8ed1ab_0,2022-02-11 14:14:24.780000+00:00,abc55e4f0c48f14fa7d62a6b0692c781,None,15741.0,conda-forge/napari-j/0.2.2/noarch/napari-j-0.2.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-j/0.2.2/noarch/napari-j-0.2.2-pyhd8ed1ab_0.tar.bz2,conda,0.2.2,conda-forge,['main'],public,,0.2.1,napari-J.Connection,Connection,napari_j.connection:Connection,,,,2.1,napari-J,0.3,,A plugin to exchange data with FIJI and to use FIJI image analysis from napari,"# napari-J +",text/markdown,https://github.com/InsightSoftwareConsortium/napari-itk-io,Matt McCormick,matt.mccormick@kitware.com,Apache-2.0,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Programming Language :: Python :: 3.13', 'Operating System :: OS Independent', 'License :: OSI Approved :: Apache Software License']","['numpy', 'napari-plugin-engine>=0.2.0', 'itk-io>=5.2.0', 'itk-napari-conversion']",>=3.8,,,False,0.2.0,conda-forge/napari-itk-io/0.2.0,0.3.0,conda-forge/napari-itk-io/0.3.0,0.4.1,conda-forge/napari-itk-io/0.4.1,conda,noarch/napari-itk-io-0.2.0-pyhd8ed1ab_0.tar.bz2,0.0,Apache-2.0,False,python,"['itk >=5.2.0', 'itk-napari-conversion', 'napari-plugin-engine >=0.2.0', 'numpy', 'python >=3.6']",pyhd8ed1ab_0,1648897184038.0,None-any-None,noarch,2022-04-02 11:02:57.627000+00:00,703332692b6e252f91f9e35df1edeef5,None,15607.0,conda-forge/napari-itk-io/0.2.0/noarch/napari-itk-io-0.2.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-itk-io/0.2.0/noarch/napari-itk-io-0.2.0-pyhd8ed1ab_0.tar.bz2,conda,0.2.0,conda-forge,['main'],conda,noarch/napari-itk-io-0.3.0-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['itk >=5.2.0', 'itk-napari-conversion', 'napari', 'napari-plugin-engine >=0.2.0', 'numpy', 'python >=3.8']",noarch,1690332126807.0,None-any-None,pyhd8ed1ab_0,2023-07-26 00:44:21.614000+00:00,cb44e6a21da4991be845dbd637be2b9c,b66f9076b0b0ae8610b1a2d817428a2db0b2e5fce464fa2f89035c0265be6b0f,17077.0,conda-forge/napari-itk-io/0.3.0/noarch/napari-itk-io-0.3.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-itk-io/0.3.0/noarch/napari-itk-io-0.3.0-pyhd8ed1ab_0.conda,conda,0.3.0,conda-forge,['main'],conda,noarch/napari-itk-io-0.4.1-pyhd0adb26_0.conda,None-any-None,False,noarch,pyhd0adb26_0,0.0,"['itk >=5.2.0', 'itk-napari-conversion', 'napari', 'napari-plugin-engine >=0.2.0', 'numpy', 'python >=3.8']",Apache-2.0,python,1731798984706.0,2024-11-16 23:17:50.083000+00:00,6b171f3394f0a8ab9f256a5bb03a5bcc,4422f4906d7d466079aa3cf593e5e33c3963fd121fe02375f76f2aeca00e5990,17378.0,conda-forge/napari-itk-io/0.4.1/noarch/napari-itk-io-0.4.1-pyhd0adb26_0.conda,//api.anaconda.org/download/conda-forge/napari-itk-io/0.4.1/noarch/napari-itk-io-0.4.1-pyhd0adb26_0.conda,conda,0.4.1,conda-forge,['main'],,napari-itk-io.write_multiple,Save multi-layer data with napari-itk-io,napari_itk_io._writer:write_multiple,napari-itk-io.write_single,Save layer data with napari-itk-io,napari_itk_io._writer:write_single,,,,,,,,,,,,,,,,,,,napari-itk-io.write_multiple,"['image*', 'labels*']",,napari-itk-io.write_single,"['image', 'labels']","['.bmp', '.dcm', '.dicom', '.gipl', '.gipl.gz', '.h5', '.hdf5', '.hdr', '.jpg', '.jpeg', '.lsm', '.mnc', '.mnc.gz', '.mnc2', '.mgh', '.mgz', '.mgh.gz', '.mha', '.mhd', '.mrc', '.nia', '.hdr', '.nhdr', '.nii', '.nii.gz', '.nrrd', '.pic', '.png', '.tif', '.tiff', '.vtk']",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +210,napari-J,0.3,napari-J,A plugin to exchange data with FIJI and to use FIJI image analysis from napari,Volker Baecker,MIT,https://github.com/MontpellierRessourcesImagerie/napari-J,62066f4227bdd9a91c87247a,['conda'],,https://github.com/MontpellierRessourcesImagerie/napari-J,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-j,http://api.anaconda.org/packages/conda-forge/napari-j,http://anaconda.org/conda-forge/napari-j,"['0.2.2', '0.2.3', '0.2.4', '0.3']",0.3,0.3,['noarch'],6.0,,['pyhd8ed1ab_0'],0.2.2,conda-forge/napari-j/0.2.2,1.0,0.0,2022-02-11 14:14:24.545000+00:00,2023-06-18 08:40:50.076000+00:00,conda,noarch/napari-j-0.2.2-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['jpype1 >=1.2.1', 'matplotlib-base', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7']",noarch,1644588716930.0,None-any-None,pyhd8ed1ab_0,2022-02-11 14:14:24.780000+00:00,abc55e4f0c48f14fa7d62a6b0692c781,None,15741.0,conda-forge/napari-j/0.2.2/noarch/napari-j-0.2.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-j/0.2.2/noarch/napari-j-0.2.2-pyhd8ed1ab_0.tar.bz2,conda,0.2.2,conda-forge,['main'],public,,0.2.1,napari-J.Connection,Connection,napari_j.connection:Connection,,,,2.1,napari-J,0.3,,A plugin to exchange data with FIJI and to use FIJI image analysis from napari,"# napari-J [![License](https://img.shields.io/pypi/l/napari-J.svg?color=green)](https://github.com/MontpellierRessourcesImagerie/napari-J/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-J.svg?color=green)](https://pypi.org/project/napari-J) @@ -20963,8 +22132,8 @@ If you encounter any problems, please [file an issue](https://github.com/Montpel [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/MontpellierRessourcesImagerie/napari-J,Volker Baecker,volker.baecker@mri.cnrs.fr,MIT,"['Development Status :: 4 - Beta', 'Intended Audience :: Science/Research', 'Topic :: Scientific/Engineering', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Framework :: napari']","['JPype1 (>=1.2.1)', 'matplotlib', 'imageio-ffmpeg', ""matplotlib ; extra == 'testing'"", ""imageio-ffmpeg ; extra == 'testing'"", ""python-matplotlib-qt5 ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'""]",>=3.7,"['Bug Tracker, https://github.com/MontpellierRessourcesImagerie/napari-J/issues', 'Documentation, https://github.com/MontpellierRessourcesImagerie/napari-J#README.md', 'Source Code, https://github.com/MontpellierRessourcesImagerie/napari-J', 'User Support, https://github.com/MontpellierRessourcesImagerie/napari-J/issues']",['testing'],True,0.2.3,conda-forge/napari-j/0.2.3,0.2.4,conda-forge/napari-j/0.2.4,0.3,conda-forge/napari-j/0.3,conda,noarch/napari-j-0.2.3-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['imageio-ffmpeg', 'jpype1 >=1.2.1', 'jupyter_client', 'magicgui', 'matplotlib-base', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'pyyaml', 'qtpy', 'scikit-image', 'vispy']",pyhd8ed1ab_0,1666567658250.0,None-any-None,noarch,2022-10-23 23:30:11.636000+00:00,61e7bba47d694deaf8eb73f1c6fb7467,None,22529.0,conda-forge/napari-j/0.2.3/noarch/napari-j-0.2.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-j/0.2.3/noarch/napari-j-0.2.3-pyhd8ed1ab_0.tar.bz2,conda,0.2.3,conda-forge,['main'],conda,noarch/napari-j-0.2.4-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['imageio-ffmpeg', 'jpype1 >=1.2.1', 'jupyter_client', 'magicgui', 'matplotlib-base', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'pyyaml', 'qtpy', 'scikit-image', 'vispy']",noarch,1666574405284.0,None-any-None,pyhd8ed1ab_0,2022-10-24 01:22:48.575000+00:00,1957461d28ff951b7f08611ee2a05b35,None,22589.0,conda-forge/napari-j/0.2.4/noarch/napari-j-0.2.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-j/0.2.4/noarch/napari-j-0.2.4-pyhd8ed1ab_0.tar.bz2,conda,0.2.4,conda-forge,['main'],conda,noarch/napari-j-0.3-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['imageio-ffmpeg', 'jpype1 >=1.2.1', 'jupyter_client', 'magicgui', 'matplotlib-base', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'pyyaml', 'qtpy', 'scikit-image', 'vispy']",MIT,python,1682252012055.0,2023-04-23 12:15:57.946000+00:00,3933255abbe3483125f6ec1af1bdcb69,c6ee3bc686715525c17b952555e783747b951b24edc1d5de1a62e219fd2d9eb7,23372.0,conda-forge/napari-j/0.3/noarch/napari-j-0.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-j/0.3/noarch/napari-j-0.3-pyhd8ed1ab_0.conda,conda,0.3,conda-forge,['main'],,napari-J.Image,Image,napari_j.image:Image,napari-J.Points,Points,napari_j.points:Points,,,,napari-J.Connection,Connection,False,napari-J.Image,Image,False,napari-J.Points,Points,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -200,napari-kics,0.0.3rc6,napari-kics,A plugin to estimate chromosome sizes from karyotype images.,Alexandr Dibrov,BSD-3-Clause,,62c56cb0eb48862cf460a52c,['conda'],,https://github.com/mpicbg-csbd/napari-kics,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-kics,http://api.anaconda.org/packages/conda-forge/napari-kics,http://anaconda.org/conda-forge/napari-kics,['0.0.3rc6'],0.0.3rc6,0.0.3rc6,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.3rc6,conda-forge/napari-kics/0.0.3rc6,1.0,0.0,2022-07-06 11:06:21.497000+00:00,2023-06-18 08:42:02.133000+00:00,conda,noarch/napari-kics-0.0.3rc6-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'pandas', 'pulp', 'pyqtgraph', 'python >=3.7', 'scikit-image']",noarch,1657105437815.0,None-any-None,pyhd8ed1ab_0,2022-07-06 11:06:21.922000+00:00,744c236c9aed824b12c729cb97c0d185,None,273460.0,conda-forge/napari-kics/0.0.3rc6/noarch/napari-kics-0.0.3rc6-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-kics/0.0.3rc6/noarch/napari-kics-0.0.3rc6-pyhd8ed1ab_0.tar.bz2,conda,0.0.3rc6,conda-forge,['main'],public,,0.2.1,napari-kics.KaryotypeWidget,KaryotypeWidget,napari_kics.widgets:KaryotypeWidget,,,,2.1,napari-kics,0.0.3rc6,,A plugin to estimate chromosome sizes from karyotype images.,"# napari-kics +",text/markdown,https://github.com/MontpellierRessourcesImagerie/napari-J,Volker Baecker,volker.baecker@mri.cnrs.fr,MIT,"['Development Status :: 4 - Beta', 'Intended Audience :: Science/Research', 'Topic :: Scientific/Engineering', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Framework :: napari']","['JPype1 (>=1.2.1)', 'matplotlib', 'imageio-ffmpeg', ""matplotlib ; extra == 'testing'"", ""imageio-ffmpeg ; extra == 'testing'"", ""python-matplotlib-qt5 ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'""]",>=3.7,"['Bug Tracker, https://github.com/MontpellierRessourcesImagerie/napari-J/issues', 'Documentation, https://github.com/MontpellierRessourcesImagerie/napari-J#README.md', 'Source Code, https://github.com/MontpellierRessourcesImagerie/napari-J', 'User Support, https://github.com/MontpellierRessourcesImagerie/napari-J/issues']",['testing'],True,0.2.3,conda-forge/napari-j/0.2.3,0.2.4,conda-forge/napari-j/0.2.4,0.3,conda-forge/napari-j/0.3,conda,noarch/napari-j-0.2.3-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['imageio-ffmpeg', 'jpype1 >=1.2.1', 'jupyter_client', 'magicgui', 'matplotlib-base', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'pyyaml', 'qtpy', 'scikit-image', 'vispy']",pyhd8ed1ab_0,1666567658250.0,None-any-None,noarch,2022-10-23 23:30:11.636000+00:00,61e7bba47d694deaf8eb73f1c6fb7467,None,22529.0,conda-forge/napari-j/0.2.3/noarch/napari-j-0.2.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-j/0.2.3/noarch/napari-j-0.2.3-pyhd8ed1ab_0.tar.bz2,conda,0.2.3,conda-forge,['main'],conda,noarch/napari-j-0.2.4-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['imageio-ffmpeg', 'jpype1 >=1.2.1', 'jupyter_client', 'magicgui', 'matplotlib-base', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'pyyaml', 'qtpy', 'scikit-image', 'vispy']",noarch,1666574405284.0,None-any-None,pyhd8ed1ab_0,2022-10-24 01:22:48.575000+00:00,1957461d28ff951b7f08611ee2a05b35,None,22589.0,conda-forge/napari-j/0.2.4/noarch/napari-j-0.2.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-j/0.2.4/noarch/napari-j-0.2.4-pyhd8ed1ab_0.tar.bz2,conda,0.2.4,conda-forge,['main'],conda,noarch/napari-j-0.3-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['imageio-ffmpeg', 'jpype1 >=1.2.1', 'jupyter_client', 'magicgui', 'matplotlib-base', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'pyyaml', 'qtpy', 'scikit-image', 'vispy']",MIT,python,1682252012055.0,2023-04-23 12:15:57.946000+00:00,3933255abbe3483125f6ec1af1bdcb69,c6ee3bc686715525c17b952555e783747b951b24edc1d5de1a62e219fd2d9eb7,23372.0,conda-forge/napari-j/0.3/noarch/napari-j-0.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-j/0.3/noarch/napari-j-0.3-pyhd8ed1ab_0.conda,conda,0.3,conda-forge,['main'],,napari-J.Image,Image,napari_j.image:Image,napari-J.Points,Points,napari_j.points:Points,,,,napari-J.Connection,Connection,False,napari-J.Image,Image,False,napari-J.Points,Points,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +211,napari-kics,0.0.3rc6,napari-kics,A plugin to estimate chromosome sizes from karyotype images.,Alexandr Dibrov,BSD-3-Clause,,62c56cb0eb48862cf460a52c,['conda'],,https://github.com/mpicbg-csbd/napari-kics,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-kics,http://api.anaconda.org/packages/conda-forge/napari-kics,http://anaconda.org/conda-forge/napari-kics,['0.0.3rc6'],0.0.3rc6,0.0.3rc6,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.3rc6,conda-forge/napari-kics/0.0.3rc6,1.0,0.0,2022-07-06 11:06:21.497000+00:00,2023-06-18 08:42:02.133000+00:00,conda,noarch/napari-kics-0.0.3rc6-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'pandas', 'pulp', 'pyqtgraph', 'python >=3.7', 'scikit-image']",noarch,1657105437815.0,None-any-None,pyhd8ed1ab_0,2022-07-06 11:06:21.922000+00:00,744c236c9aed824b12c729cb97c0d185,None,273460.0,conda-forge/napari-kics/0.0.3rc6/noarch/napari-kics-0.0.3rc6-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-kics/0.0.3rc6/noarch/napari-kics-0.0.3rc6-pyhd8ed1ab_0.tar.bz2,conda,0.0.3rc6,conda-forge,['main'],public,,0.2.1,napari-kics.KaryotypeWidget,KaryotypeWidget,napari_kics.widgets:KaryotypeWidget,,,,2.1,napari-kics,0.0.3rc6,,A plugin to estimate chromosome sizes from karyotype images.,"# napari-kics ![napari-kics](https://github.com/mpicbg-csbd/napari-kics/raw/main/docs/banner.png?sanitize=true&raw=true) @@ -21089,8 +22258,8 @@ https://user-images.githubusercontent.com/17703905/139654249-685703b5-2196-4a73- -",text/markdown,,Alexandr Dibrov,dibrov@mpi-cbg.de,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari[all]', 'scikit-image', 'pandas', 'pulp', 'pyqtgraph']",>=3.7,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-kics.load_sample_data,load_sample_data,napari_kics.widget_loader:load_sample_data,,,,,,,napari-kics.KaryotypeWidget,KaryotypeWidget,False,,,,,,,,,,,,,,,,,,,,napari-kics.load_sample_data,sample,sample,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -201,napari-kld,1.1.0,Kernel Learning Deconvolution,"Kernel learning deconvolution (KLD) is a rapid deconvolution algorithm for fluorescence microscopic image, which learns the forward and backward kernels in Richardson-Lucy Deconvolution (KLD) from paired low-/high-resolution images. ",Qiqi Lu," +",text/markdown,,Alexandr Dibrov,dibrov@mpi-cbg.de,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari[all]', 'scikit-image', 'pandas', 'pulp', 'pyqtgraph']",>=3.7,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-kics.load_sample_data,load_sample_data,napari_kics.widget_loader:load_sample_data,,,,,,,napari-kics.KaryotypeWidget,KaryotypeWidget,False,,,,,,,,,,,,,,,,,,,,napari-kics.load_sample_data,sample,sample,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +212,napari-kld,1.1.0,Kernel Learning Deconvolution,"Kernel learning deconvolution (KLD) is a rapid deconvolution algorithm for fluorescence microscopic image, which learns the forward and backward kernels in Richardson-Lucy Deconvolution (KLD) from paired low-/high-resolution images. ",Qiqi Lu," Copyright (c) 2024, Qiqi Lu All rights reserved. @@ -21516,8 +22685,8 @@ SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. -","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy==1.26.4', 'magicgui', 'qtpy', 'scikit-image', 'torch==2.0', 'torchvision', 'fft-conv-pytorch', 'pytorch-msssim', 'tensorboard', 'pydicom', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.9,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['Image Processing'],napari-kld.write_multiple,Save multi-layer data with Kernel Learning Deconvolution,napari_kld._writer:write_multiple,napari-kld.write_single_image,Save image data with Kernel Learning Deconvolution,napari_kld._writer:write_single_image,napari-kld.make_sample_data,Load sample data from Kernel Learning Deconvolution,napari_kld._sample_data:make_sample_data,napari-kld.rldwidget,RL Deconvolution,False,napari-kld.kldwidget,KL Deconvolution,False,,,,,,,napari-kld.rldwidget,RL Deconvolution,napari_kld:RLDwidget,napari-kld.write_multiple,"['image*', 'labels*']",,napari-kld.write_single_image,['image'],['.npy'],,napari-kld.make_sample_data,unique_id.1,Kernel Learning Deconvolution,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-kld.kldwidget,KL Deconvolution,napari_kld:KLDwidget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -202,napari-label-interpolator,0.1.1,napari label interpolator,A napari plugin to interpolate any number of nd-labels across a single dimension.,Lorenzo Gaifas,GPL-3.0-only,https://github.com/brisvag/napari-label-interpolator,64221035cc61138ffda7c322,['conda'],,https://github.com/brisvag/napari-label-interpolator,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-label-interpolator,http://api.anaconda.org/packages/conda-forge/napari-label-interpolator,http://anaconda.org/conda-forge/napari-label-interpolator,['0.1.0'],0.1.0,0.1.0,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.0,conda-forge/napari-label-interpolator/0.1.0,1.0,0.0,2023-03-27 21:52:50.787000+00:00,2023-06-18 17:27:51.519000+00:00,conda,noarch/napari-label-interpolator-0.1.0-pyhd8ed1ab_0.conda,0.0,GPL-3.0-only,False,python,"['edt', 'magicgui', 'python >=3.8']",noarch,1679953917785.0,None-any-None,pyhd8ed1ab_0,2023-03-27 21:52:51.218000+00:00,6dbbef5ae62efc629a6fe026982b5662,a3665b7dd13b31d575dbfe28722a9bb45355dd2ca2deb6983633ea6ae8f6b9fd,22504.0,conda-forge/napari-label-interpolator/0.1.0/noarch/napari-label-interpolator-0.1.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-label-interpolator/0.1.0/noarch/napari-label-interpolator-0.1.0-pyhd8ed1ab_0.conda,conda,0.1.0,conda-forge,['main'],public,,0.2.1,napari-label-interpolator.make_widget,Make interpolator widget,napari_label_interpolator.interpolator:interpolate,,,,2.1,napari-label-interpolator,0.1.1,,A napari plugin to interpolate any number of nd-labels across a single dimension.,"# napari-label-interpolator +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy==1.26.4', 'magicgui', 'qtpy', 'scikit-image', 'torch==2.0', 'torchvision', 'fft-conv-pytorch', 'pytorch-msssim', 'tensorboard', 'pydicom', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.9,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['Image Processing'],napari-kld.write_multiple,Save multi-layer data with Kernel Learning Deconvolution,napari_kld._writer:write_multiple,napari-kld.write_single_image,Save image data with Kernel Learning Deconvolution,napari_kld._writer:write_single_image,napari-kld.make_sample_data,Load sample data from Kernel Learning Deconvolution,napari_kld._sample_data:make_sample_data,napari-kld.rldwidget,RL Deconvolution,False,napari-kld.kldwidget,KL Deconvolution,False,,,,,,,napari-kld.rldwidget,RL Deconvolution,napari_kld:RLDwidget,napari-kld.write_multiple,"['image*', 'labels*']",,napari-kld.write_single_image,['image'],['.npy'],,napari-kld.make_sample_data,unique_id.1,Kernel Learning Deconvolution,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-kld.kldwidget,KL Deconvolution,napari_kld:KLDwidget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +213,napari-label-interpolator,0.1.1,napari label interpolator,A napari plugin to interpolate any number of nd-labels across a single dimension.,Lorenzo Gaifas,GPL-3.0-only,https://github.com/brisvag/napari-label-interpolator,64221035cc61138ffda7c322,['conda'],,https://github.com/brisvag/napari-label-interpolator,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-label-interpolator,http://api.anaconda.org/packages/conda-forge/napari-label-interpolator,http://anaconda.org/conda-forge/napari-label-interpolator,['0.1.0'],0.1.0,0.1.0,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.0,conda-forge/napari-label-interpolator/0.1.0,1.0,0.0,2023-03-27 21:52:50.787000+00:00,2023-06-18 17:27:51.519000+00:00,conda,noarch/napari-label-interpolator-0.1.0-pyhd8ed1ab_0.conda,0.0,GPL-3.0-only,False,python,"['edt', 'magicgui', 'python >=3.8']",noarch,1679953917785.0,None-any-None,pyhd8ed1ab_0,2023-03-27 21:52:51.218000+00:00,6dbbef5ae62efc629a6fe026982b5662,a3665b7dd13b31d575dbfe28722a9bb45355dd2ca2deb6983633ea6ae8f6b9fd,22504.0,conda-forge/napari-label-interpolator/0.1.0/noarch/napari-label-interpolator-0.1.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-label-interpolator/0.1.0/noarch/napari-label-interpolator-0.1.0-pyhd8ed1ab_0.conda,conda,0.1.0,conda-forge,['main'],public,,0.2.1,napari-label-interpolator.make_widget,Make interpolator widget,napari_label_interpolator.interpolator:interpolate,,,,2.1,napari-label-interpolator,0.1.1,,A napari plugin to interpolate any number of nd-labels across a single dimension.,"# napari-label-interpolator [![License GNU GPL v3.0](https://img.shields.io/pypi/l/napari-label-interpolator.svg?color=green)](https://github.com/brisvag/napari-label-interpolator/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-label-interpolator.svg?color=green)](https://pypi.org/project/napari-label-interpolator) @@ -21588,8 +22757,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/brisvag/napari-label-interpolator,Lorenzo Gaifas,brisvag@gmail.com,GPL-3.0-only,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['magicgui', 'edt', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/brisvag/napari-label-interpolator/issues', 'Documentation, https://github.com/brisvag/napari-label-interpolator#README.md', 'Source Code, https://github.com/brisvag/napari-label-interpolator', 'User Support, https://github.com/brisvag/napari-label-interpolator/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-label-interpolator.make_widget,Label interpolator,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -203,napari-labelimg4classification,0.1.1,napari-labelimg4classification,Image-Level labeling tool,Hiroki Kawai,MIT,https://github.com/hiroalchem/napari-labelimg4classification,61fa6881302e80ce8c3ed7cf,['conda'],,https://github.com/hiroalchem/napari-labelimg4classification,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-labelimg4classification,http://api.anaconda.org/packages/conda-forge/napari-labelimg4classification,http://anaconda.org/conda-forge/napari-labelimg4classification,['0.1.1'],0.1.1,0.1.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.1,conda-forge/napari-labelimg4classification/0.1.1,1.0,0.0,2022-02-02 11:18:23.114000+00:00,2023-06-18 08:40:41.018000+00:00,conda,noarch/napari-labelimg4classification-0.1.1-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'pandas', 'python >=3.7']",noarch,1643800527011.0,None-any-None,pyhd8ed1ab_0,2022-02-02 11:18:23.362000+00:00,366cd5bbc06b7288a626a33ce6225815,None,10351.0,conda-forge/napari-labelimg4classification/0.1.1/noarch/napari-labelimg4classification-0.1.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-labelimg4classification/0.1.1/noarch/napari-labelimg4classification-0.1.1-pyhd8ed1ab_0.tar.bz2,conda,0.1.1,conda-forge,['main'],public,,0.2.1,napari-labelimg4classification.L4CWidget,L4CWidget,napari_labelimg4classification._dock_widget:L4CWidget,,,,2.1,napari-labelimg4classification,0.1.1,['UNKNOWN'],Image-Level labeling tool,"# napari-labelimg4classification +",text/markdown,https://github.com/brisvag/napari-label-interpolator,Lorenzo Gaifas,brisvag@gmail.com,GPL-3.0-only,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['magicgui', 'edt', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/brisvag/napari-label-interpolator/issues', 'Documentation, https://github.com/brisvag/napari-label-interpolator#README.md', 'Source Code, https://github.com/brisvag/napari-label-interpolator', 'User Support, https://github.com/brisvag/napari-label-interpolator/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-label-interpolator.make_widget,Label interpolator,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +214,napari-labelimg4classification,0.1.1,napari-labelimg4classification,Image-Level labeling tool,Hiroki Kawai,MIT,https://github.com/hiroalchem/napari-labelimg4classification,61fa6881302e80ce8c3ed7cf,['conda'],,https://github.com/hiroalchem/napari-labelimg4classification,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-labelimg4classification,http://api.anaconda.org/packages/conda-forge/napari-labelimg4classification,http://anaconda.org/conda-forge/napari-labelimg4classification,['0.1.1'],0.1.1,0.1.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.1,conda-forge/napari-labelimg4classification/0.1.1,1.0,0.0,2022-02-02 11:18:23.114000+00:00,2023-06-18 08:40:41.018000+00:00,conda,noarch/napari-labelimg4classification-0.1.1-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'pandas', 'python >=3.7']",noarch,1643800527011.0,None-any-None,pyhd8ed1ab_0,2022-02-02 11:18:23.362000+00:00,366cd5bbc06b7288a626a33ce6225815,None,10351.0,conda-forge/napari-labelimg4classification/0.1.1/noarch/napari-labelimg4classification-0.1.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-labelimg4classification/0.1.1/noarch/napari-labelimg4classification-0.1.1-pyhd8ed1ab_0.tar.bz2,conda,0.1.1,conda-forge,['main'],public,,0.2.1,napari-labelimg4classification.L4CWidget,L4CWidget,napari_labelimg4classification._dock_widget:L4CWidget,,,,2.1,napari-labelimg4classification,0.1.1,['UNKNOWN'],Image-Level labeling tool,"# napari-labelimg4classification [![License](https://img.shields.io/pypi/l/napari-labelimg4classification.svg?color=green)](https://github.com/hiroalchem/napari-labelimg4classification/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-labelimg4classification.svg?color=green)](https://pypi.org/project/napari-labelimg4classification) @@ -21671,8 +22840,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/hiroalchem/napari-labelimg4classification,Hiroki Kawai,h.kawai888@gmail.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['napari-plugin-engine (>=0.1.4)', 'napari', 'numpy', 'napari-tools-menu', 'pandas']",>=3.7,"['Bug Tracker, https://github.com/hiroalchem/napari-labelimg4classification/issues', 'Documentation, https://github.com/hiroalchem/napari-labelimg4classification#README.md', 'Source Code, https://github.com/hiroalchem/napari-labelimg4classification', 'User Support, https://github.com/hiroalchem/napari-labelimg4classification/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-labelimg4classification.L4CWidget,L4CWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -204,napari-labeling,0.1.2,napari Labeling,A napari plugin for handling overlapping labeling data,Tom Burke,BSD-3-Clause,https://github.com/Labelings/napari-labeling,62c69f25db466a21da46191b,['conda'],,https://github.com/Labelings/napari-labeling,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-labeling,http://api.anaconda.org/packages/conda-forge/napari-labeling,http://anaconda.org/conda-forge/napari-labeling,['0.1.2'],0.1.2,0.1.2,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.2,conda-forge/napari-labeling/0.1.2,1.0,0.0,2022-07-07 08:53:55.286000+00:00,2023-06-18 08:42:02.438000+00:00,conda,noarch/napari-labeling-0.1.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['labeling', 'napari', 'numpy', 'python >=3.7']",noarch,1657183914308.0,None-any-None,pyhd8ed1ab_0,2022-07-07 08:53:55.553000+00:00,ac0880f784c9461f429ab9e251cfc7b7,None,12960.0,conda-forge/napari-labeling/0.1.2/noarch/napari-labeling-0.1.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-labeling/0.1.2/noarch/napari-labeling-0.1.2-pyhd8ed1ab_0.tar.bz2,conda,0.1.2,conda-forge,['main'],public,,0.2.1,napari-labeling.napari_get_reader,Open data with napari Labeling,napari_labeling._reader:napari_get_reader,napari-labeling.napari_get_reader,['*.lbl.json'],False,2.1,napari-labeling,0.1.2,['UNKNOWN'],A napari plugin for handling overlapping labeling data,"# napari-labeling +",text/markdown,https://github.com/hiroalchem/napari-labelimg4classification,Hiroki Kawai,h.kawai888@gmail.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['napari-plugin-engine (>=0.1.4)', 'napari', 'numpy', 'napari-tools-menu', 'pandas']",>=3.7,"['Bug Tracker, https://github.com/hiroalchem/napari-labelimg4classification/issues', 'Documentation, https://github.com/hiroalchem/napari-labelimg4classification#README.md', 'Source Code, https://github.com/hiroalchem/napari-labelimg4classification', 'User Support, https://github.com/hiroalchem/napari-labelimg4classification/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-labelimg4classification.L4CWidget,L4CWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +215,napari-labeling,0.1.2,napari Labeling,A napari plugin for handling overlapping labeling data,Tom Burke,BSD-3-Clause,https://github.com/Labelings/napari-labeling,62c69f25db466a21da46191b,['conda'],,https://github.com/Labelings/napari-labeling,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-labeling,http://api.anaconda.org/packages/conda-forge/napari-labeling,http://anaconda.org/conda-forge/napari-labeling,['0.1.2'],0.1.2,0.1.2,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.2,conda-forge/napari-labeling/0.1.2,1.0,0.0,2022-07-07 08:53:55.286000+00:00,2023-06-18 08:42:02.438000+00:00,conda,noarch/napari-labeling-0.1.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['labeling', 'napari', 'numpy', 'python >=3.7']",noarch,1657183914308.0,None-any-None,pyhd8ed1ab_0,2022-07-07 08:53:55.553000+00:00,ac0880f784c9461f429ab9e251cfc7b7,None,12960.0,conda-forge/napari-labeling/0.1.2/noarch/napari-labeling-0.1.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-labeling/0.1.2/noarch/napari-labeling-0.1.2-pyhd8ed1ab_0.tar.bz2,conda,0.1.2,conda-forge,['main'],public,,0.2.1,napari-labeling.napari_get_reader,Open data with napari Labeling,napari_labeling._reader:napari_get_reader,napari-labeling.napari_get_reader,['*.lbl.json'],False,2.1,napari-labeling,0.1.2,['UNKNOWN'],A napari plugin for handling overlapping labeling data,"# napari-labeling [![License](https://img.shields.io/pypi/l/napari-labeling.svg?color=green)](https://github.com/tomburke-rse/napari-labeling/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-labeling.svg?color=green)](https://pypi.org/project/napari-labeling) @@ -21750,8 +22919,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [file an issue]: https://github.com/Labelings/napari-labeling/issues -",text/markdown,https://github.com/Labelings/napari-labeling,Tom Burke,burke@mpi-cbg.de,BSD-3-Clause,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['numpy', 'labeling']",>=3.7,,,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-labeling.write_single_image,Save image data with napari Labeling,napari_labeling._writer:writer_function,napari-labeling.make_magic_widget,Make example magic widget,napari_labeling._widget:edit_widget,napari-labeling.make_create_widget,A widget to create a labeling object layer from label layers,napari_labeling._create_widget:create_widget,napari-labeling.make_magic_widget,Labeling Explorer,False,napari-labeling.make_create_widget,Create multi-layer labels,False,,,,,,,,,,napari-labeling.write_single_image,['labels'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -205,napari-labelling-assistant,0.0.5,napari-labelling-assistant,A lightweight plugin for visualizing labelling statistics.,Pranjal Dhole,MIT,https://github.com/pranjaldhole/napari-labelling-assistant,61f3e2738d5f5893645ab13d,['conda'],,https://github.com/pranjaldhole/napari-labelling-assistant,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-labelling-assistant,http://api.anaconda.org/packages/conda-forge/napari-labelling-assistant,http://anaconda.org/conda-forge/napari-labelling-assistant,['0.0.5'],0.0.5,0.0.5,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.5,conda-forge/napari-labelling-assistant/0.0.5,1.0,0.0,2022-01-28 12:32:48.334000+00:00,2023-06-18 08:40:39.186000+00:00,conda,noarch/napari-labelling-assistant-0.0.5-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['matplotlib-base', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7']",noarch,1643372994976.0,None-any-None,pyhd8ed1ab_0,2022-01-28 12:32:49.451000+00:00,91171489e8b76ecb58bc2dc980eafadc,None,10534.0,conda-forge/napari-labelling-assistant/0.0.5/noarch/napari-labelling-assistant-0.0.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-labelling-assistant/0.0.5/noarch/napari-labelling-assistant-0.0.5-pyhd8ed1ab_0.tar.bz2,conda,0.0.5,conda-forge,['main'],public,,0.2.1,napari-labelling-assistant.LabellingAssistant,LabellingAssistant,napari_labelling_assistant._dock_widget:LabellingAssistant,,,,2.1,napari-labelling-assistant,0.0.5,['UNKNOWN'],A lightweight plugin for visualizing labelling statistics.,"# napari-labelling-assistant +",text/markdown,https://github.com/Labelings/napari-labeling,Tom Burke,burke@mpi-cbg.de,BSD-3-Clause,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['numpy', 'labeling']",>=3.7,,,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-labeling.write_single_image,Save image data with napari Labeling,napari_labeling._writer:writer_function,napari-labeling.make_magic_widget,Make example magic widget,napari_labeling._widget:edit_widget,napari-labeling.make_create_widget,A widget to create a labeling object layer from label layers,napari_labeling._create_widget:create_widget,napari-labeling.make_magic_widget,Labeling Explorer,False,napari-labeling.make_create_widget,Create multi-layer labels,False,,,,,,,,,,napari-labeling.write_single_image,['labels'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +216,napari-labelling-assistant,0.0.5,napari-labelling-assistant,A lightweight plugin for visualizing labelling statistics.,Pranjal Dhole,MIT,https://github.com/pranjaldhole/napari-labelling-assistant,61f3e2738d5f5893645ab13d,['conda'],,https://github.com/pranjaldhole/napari-labelling-assistant,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-labelling-assistant,http://api.anaconda.org/packages/conda-forge/napari-labelling-assistant,http://anaconda.org/conda-forge/napari-labelling-assistant,['0.0.5'],0.0.5,0.0.5,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.5,conda-forge/napari-labelling-assistant/0.0.5,1.0,0.0,2022-01-28 12:32:48.334000+00:00,2023-06-18 08:40:39.186000+00:00,conda,noarch/napari-labelling-assistant-0.0.5-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['matplotlib-base', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7']",noarch,1643372994976.0,None-any-None,pyhd8ed1ab_0,2022-01-28 12:32:49.451000+00:00,91171489e8b76ecb58bc2dc980eafadc,None,10534.0,conda-forge/napari-labelling-assistant/0.0.5/noarch/napari-labelling-assistant-0.0.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-labelling-assistant/0.0.5/noarch/napari-labelling-assistant-0.0.5-pyhd8ed1ab_0.tar.bz2,conda,0.0.5,conda-forge,['main'],public,,0.2.1,napari-labelling-assistant.LabellingAssistant,LabellingAssistant,napari_labelling_assistant._dock_widget:LabellingAssistant,,,,2.1,napari-labelling-assistant,0.0.5,['UNKNOWN'],A lightweight plugin for visualizing labelling statistics.,"# napari-labelling-assistant [![License](https://img.shields.io/pypi/l/napari-labelling-assistant.svg?color=green)](https://github.com/pranjaldhole/napari-labelling-assistant/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-labelling-assistant.svg?color=green)](https://pypi.org/project/napari-labelling-assistant) @@ -21820,8 +22989,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/pranjaldhole/napari-labelling-assistant,Pranjal Dhole,dhole.pranjal@gmail.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'matplotlib']",>=3.7,"['Bug Tracker, https://github.com/pranjaldhole/napari-labelling-assistant/issues', 'Documentation, https://github.com/pranjaldhole/napari-labelling-assistant#README.md', 'Source Code, https://github.com/pranjaldhole/napari-labelling-assistant', 'User Support, https://github.com/pranjaldhole/napari-labelling-assistant/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-labelling-assistant.LabellingAssistant,LabellingAssistant,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -206,napari-labelprop,1.0.0,napari Label Propagation,Label propagation through deep registration,nathandecaux,BSD-3-Clause,,6559406ea518ee4c21964b4e,['conda'],,https://pypi.org/project/napari-labelprop,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-labelprop,http://api.anaconda.org/packages/conda-forge/napari-labelprop,http://anaconda.org/conda-forge/napari-labelprop,['1.0.0'],1.0.0,1.0.0,['noarch'],3.0,https://github.com/nathandecaux/napari-labelprop,['pyh9208f05_0'],1.0.0,conda-forge/napari-labelprop/1.0.0,1.0,0.0,2023-11-18 22:53:25.630000+00:00,2023-11-18 22:53:34.415000+00:00,conda,noarch/napari-labelprop-1.0.0-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['deep-labelprop', 'magicgui', 'monai', 'napari', 'napari-nifti', 'nibabel', 'numpy', 'python >=3.8', 'pytorch', 'qtpy', 'scikit-image']",noarch,1700347815693.0,None-any-None,pyh9208f05_0,2023-11-18 22:53:26.056000+00:00,c0b3957ae61a97e9fa23e1f941c5b5c3,ebdea996961cb81f8085ef63bc807807d8c2b5be2346113088f25ffe337e2f6c,19452.0,conda-forge/napari-labelprop/1.0.0/noarch/napari-labelprop-1.0.0-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-labelprop/1.0.0/noarch/napari-labelprop-1.0.0-pyh9208f05_0.conda,conda,1.0.0,conda-forge,['main'],public,,0.2.1,napari-labelprop.get_reader,Open data with napari Label Propagation,napari_labelprop._reader:napari_get_reader,,,,2.1,napari-labelprop,1.0.0,,Label propagation through deep registration,"# napari-labelprop +",text/markdown,https://github.com/pranjaldhole/napari-labelling-assistant,Pranjal Dhole,dhole.pranjal@gmail.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'matplotlib']",>=3.7,"['Bug Tracker, https://github.com/pranjaldhole/napari-labelling-assistant/issues', 'Documentation, https://github.com/pranjaldhole/napari-labelling-assistant#README.md', 'Source Code, https://github.com/pranjaldhole/napari-labelling-assistant', 'User Support, https://github.com/pranjaldhole/napari-labelling-assistant/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-labelling-assistant.LabellingAssistant,LabellingAssistant,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +217,napari-labelprop,1.0.0,napari Label Propagation,Label propagation through deep registration,nathandecaux,BSD-3-Clause,,6559406ea518ee4c21964b4e,['conda'],,https://pypi.org/project/napari-labelprop,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-labelprop,http://api.anaconda.org/packages/conda-forge/napari-labelprop,http://anaconda.org/conda-forge/napari-labelprop,['1.0.0'],1.0.0,1.0.0,['noarch'],3.0,https://github.com/nathandecaux/napari-labelprop,['pyh9208f05_0'],1.0.0,conda-forge/napari-labelprop/1.0.0,1.0,0.0,2023-11-18 22:53:25.630000+00:00,2023-11-18 22:53:34.415000+00:00,conda,noarch/napari-labelprop-1.0.0-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['deep-labelprop', 'magicgui', 'monai', 'napari', 'napari-nifti', 'nibabel', 'numpy', 'python >=3.8', 'pytorch', 'qtpy', 'scikit-image']",noarch,1700347815693.0,None-any-None,pyh9208f05_0,2023-11-18 22:53:26.056000+00:00,c0b3957ae61a97e9fa23e1f941c5b5c3,ebdea996961cb81f8085ef63bc807807d8c2b5be2346113088f25ffe337e2f6c,19452.0,conda-forge/napari-labelprop/1.0.0/noarch/napari-labelprop-1.0.0-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-labelprop/1.0.0/noarch/napari-labelprop-1.0.0-pyh9208f05_0.conda,conda,1.0.0,conda-forge,['main'],public,,0.2.1,napari-labelprop.get_reader,Open data with napari Label Propagation,napari_labelprop._reader:napari_get_reader,,,,2.1,napari-labelprop,1.0.0,,Label propagation through deep registration,"# napari-labelprop [![License](https://img.shields.io/pypi/l/napari-labelprop.svg?color=green)](https://github.com/nathandecaux/napari-labelprop/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-labelprop.svg?color=green)](https://pypi.org/project/napari-labelprop) @@ -21934,8 +23103,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,,nathandecaux,nathan.decaux@imt-atlantique.fr,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['deep-labelprop', 'napari-nifti', 'numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-labelprop.write_multiple,Save multi-layer data with napari Label Propagation,napari_labelprop._writer:write_multiple,napari-labelprop.write_single_image,Save image data with napari Label Propagation,napari_labelprop._writer:write_single_image,napari-labelprop.make_sample_data,Load sample data from napari Label Propagation,napari_labelprop._sample_data:make_sample_data,napari-labelprop.inference_widget,Inference,False,napari-labelprop.training_widget,Training,False,,,,,,,napari-labelprop.make_qwidget,Make example QWidget,napari_labelprop._label_prop_widget:TrucQWidget,,,,,,,,napari-labelprop.make_sample_data,unique_id.1,napari Label Propagation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-labelprop.make_magic_widget,Make example magic widget,napari_labelprop._widget:example_magic_widget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-labelprop.make_func_widget,Make example function widget,napari_labelprop._widget:example_function_widget,napari-labelprop.inference_widget,Propagate labels from checkpoint,napari_labelprop._label_prop_widget:inference,napari-labelprop.training_widget,Training model to propagate labels,napari_labelprop._label_prop_widget:training,napari-labelprop.filter_widget,Filtering label slices,napari_labelprop._label_prop_widget:filter_slices,napari-labelprop.get_metrics,Show metrics between two label slices,napari_labelprop._label_prop_widget:GetMetrics,napari-labelprop.remove_small_objects,Remove objects smaller than the specified size.,napari_labelprop._label_prop_widget:remove_small_objects,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -207,napari-labels-overlap,0.0.3,napari labels overlap,create an overlap labels layer from two labels layers,Chi-Li Chiu,BSD-3-Clause,https://github.com/chili-chiu/napari-labels-overlap,62063ebb39552dcb59f032d3,['conda'],,https://github.com/chili-chiu/napari-labels-overlap,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-labels-overlap,http://api.anaconda.org/packages/conda-forge/napari-labels-overlap,http://anaconda.org/conda-forge/napari-labels-overlap,"['0.0.2', '0.0.3']",0.0.3,0.0.3,['noarch'],4.0,,['pyhd8ed1ab_0'],0.0.2,conda-forge/napari-labels-overlap/0.0.2,1.0,0.0,2022-02-11 10:47:20.961000+00:00,2023-06-18 08:40:49.851000+00:00,conda,noarch/napari-labels-overlap-0.0.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'python >=3.7', 'scikit-image']",noarch,1644576299491.0,None-any-None,pyhd8ed1ab_0,2022-02-11 10:47:21.595000+00:00,7d8d7fdc2c3da2de8384197f48df888f,None,9573.0,conda-forge/napari-labels-overlap/0.0.2/noarch/napari-labels-overlap-0.0.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-labels-overlap/0.0.2/noarch/napari-labels-overlap-0.0.2-pyhd8ed1ab_0.tar.bz2,conda,0.0.2,conda-forge,['main'],public,,0.2.1,napari-labels-overlap.labels_overlap,labels_overlap,napari_labels_overlap._dock_widget:labels_overlap,,,,2.1,napari-labels-overlap,0.0.3,,create an overlap labels layer from two labels layers,"# napari-labels-overlap +",text/markdown,,nathandecaux,nathan.decaux@imt-atlantique.fr,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['deep-labelprop', 'napari-nifti', 'numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-labelprop.write_multiple,Save multi-layer data with napari Label Propagation,napari_labelprop._writer:write_multiple,napari-labelprop.write_single_image,Save image data with napari Label Propagation,napari_labelprop._writer:write_single_image,napari-labelprop.make_sample_data,Load sample data from napari Label Propagation,napari_labelprop._sample_data:make_sample_data,napari-labelprop.inference_widget,Inference,False,napari-labelprop.training_widget,Training,False,,,,,,,napari-labelprop.make_qwidget,Make example QWidget,napari_labelprop._label_prop_widget:TrucQWidget,,,,,,,,napari-labelprop.make_sample_data,unique_id.1,napari Label Propagation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-labelprop.make_magic_widget,Make example magic widget,napari_labelprop._widget:example_magic_widget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-labelprop.make_func_widget,Make example function widget,napari_labelprop._widget:example_function_widget,napari-labelprop.inference_widget,Propagate labels from checkpoint,napari_labelprop._label_prop_widget:inference,napari-labelprop.training_widget,Training model to propagate labels,napari_labelprop._label_prop_widget:training,napari-labelprop.filter_widget,Filtering label slices,napari_labelprop._label_prop_widget:filter_slices,napari-labelprop.get_metrics,Show metrics between two label slices,napari_labelprop._label_prop_widget:GetMetrics,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +218,napari-labels-overlap,0.0.3,napari labels overlap,create an overlap labels layer from two labels layers,Chi-Li Chiu,BSD-3-Clause,https://github.com/chili-chiu/napari-labels-overlap,62063ebb39552dcb59f032d3,['conda'],,https://github.com/chili-chiu/napari-labels-overlap,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-labels-overlap,http://api.anaconda.org/packages/conda-forge/napari-labels-overlap,http://anaconda.org/conda-forge/napari-labels-overlap,"['0.0.2', '0.0.3']",0.0.3,0.0.3,['noarch'],4.0,,['pyhd8ed1ab_0'],0.0.2,conda-forge/napari-labels-overlap/0.0.2,1.0,0.0,2022-02-11 10:47:20.961000+00:00,2023-06-18 08:40:49.851000+00:00,conda,noarch/napari-labels-overlap-0.0.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'python >=3.7', 'scikit-image']",noarch,1644576299491.0,None-any-None,pyhd8ed1ab_0,2022-02-11 10:47:21.595000+00:00,7d8d7fdc2c3da2de8384197f48df888f,None,9573.0,conda-forge/napari-labels-overlap/0.0.2/noarch/napari-labels-overlap-0.0.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-labels-overlap/0.0.2/noarch/napari-labels-overlap-0.0.2-pyhd8ed1ab_0.tar.bz2,conda,0.0.2,conda-forge,['main'],public,,0.2.1,napari-labels-overlap.labels_overlap,labels_overlap,napari_labels_overlap._dock_widget:labels_overlap,,,,2.1,napari-labels-overlap,0.0.3,,create an overlap labels layer from two labels layers,"# napari-labels-overlap [![License](https://img.shields.io/pypi/l/napari-labels-overlap.svg?color=green)](https://github.com/chili-chiu/napari-labels-overlap/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-labels-overlap.svg?color=green)](https://pypi.org/project/napari-labels-overlap) @@ -22031,8 +23200,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/chili-chiu/napari-labels-overlap,Chi-Li Chiu,cchiu@chanzuckerberg.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']",['scikit-image'],>=3.7,"['Bug Tracker, https://github.com/chili-chiu/napari-labels-overlap/issues', 'Documentation, https://github.com/chili-chiu/napari-labels-overlap#README.md', 'Source Code, https://github.com/chili-chiu/napari-labels-overlap', 'User Support, https://github.com/chili-chiu/napari-labels-overlap/issues']",,False,0.0.3,conda-forge/napari-labels-overlap/0.0.3,,,,,conda,noarch/napari-labels-overlap-0.0.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'python >=3.7', 'scikit-image']",pyhd8ed1ab_0,1657037954516.0,None-any-None,noarch,2022-07-05 16:21:31.357000+00:00,92cc30e799e4ac89a112c3348b36bea3,None,9797.0,conda-forge/napari-labels-overlap/0.0.3/noarch/napari-labels-overlap-0.0.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-labels-overlap/0.0.3/noarch/napari-labels-overlap-0.0.3-pyhd8ed1ab_0.tar.bz2,conda,0.0.3,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-labels-overlap.labels_overlap,labels overlap,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -208,napari-large-image-importer,0.0.2,NLII,"Napari plugin for easy, memory-efficient import of large images.",Hiroki Kawai,BSD-3-Clause,https://github.com/hiroalchem/napari-large-image-importer,63f5367f6eeeeb6bd718ea12,['conda'],,https://github.com/hiroalchem/napari-large-image-importer,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-large-image-importer,http://api.anaconda.org/packages/conda-forge/napari-large-image-importer,http://anaconda.org/conda-forge/napari-large-image-importer,['0.0.2'],0.0.2,0.0.2,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.2,conda-forge/napari-large-image-importer/0.0.2,1.0,0.0,2023-02-21 21:24:12.581000+00:00,2023-06-18 17:27:39.014000+00:00,conda,noarch/napari-large-image-importer-0.0.2-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['dask-core', 'imagecodecs', 'magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'tifffile', 'zarr']",noarch,1677014545551.0,None-any-None,pyhd8ed1ab_0,2023-02-21 21:24:12.949000+00:00,0fce9e47a671080fcf187381309bff35,cfb248f0f9f1e7be5efbadcf00f892c516cdc8735149e12a100a9530d7ab7724,11947.0,conda-forge/napari-large-image-importer/0.0.2/noarch/napari-large-image-importer-0.0.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-large-image-importer/0.0.2/noarch/napari-large-image-importer-0.0.2-pyhd8ed1ab_0.conda,conda,0.0.2,conda-forge,['main'],public,,0.2.1,napari-large-image-importer.make_qwidget,Make nlii QWidget,napari_large_image_importer._widget:NliiQWidget,,,,2.1,napari-large-image-importer,0.0.2,,"Napari plugin for easy, memory-efficient import of large images.","# napari-large-image-importer +",text/markdown,https://github.com/chili-chiu/napari-labels-overlap,Chi-Li Chiu,cchiu@chanzuckerberg.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']",['scikit-image'],>=3.7,"['Bug Tracker, https://github.com/chili-chiu/napari-labels-overlap/issues', 'Documentation, https://github.com/chili-chiu/napari-labels-overlap#README.md', 'Source Code, https://github.com/chili-chiu/napari-labels-overlap', 'User Support, https://github.com/chili-chiu/napari-labels-overlap/issues']",,False,0.0.3,conda-forge/napari-labels-overlap/0.0.3,,,,,conda,noarch/napari-labels-overlap-0.0.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'python >=3.7', 'scikit-image']",pyhd8ed1ab_0,1657037954516.0,None-any-None,noarch,2022-07-05 16:21:31.357000+00:00,92cc30e799e4ac89a112c3348b36bea3,None,9797.0,conda-forge/napari-labels-overlap/0.0.3/noarch/napari-labels-overlap-0.0.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-labels-overlap/0.0.3/noarch/napari-labels-overlap-0.0.3-pyhd8ed1ab_0.tar.bz2,conda,0.0.3,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-labels-overlap.labels_overlap,labels overlap,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +219,napari-large-image-importer,0.0.2,NLII,"Napari plugin for easy, memory-efficient import of large images.",Hiroki Kawai,BSD-3-Clause,https://github.com/hiroalchem/napari-large-image-importer,63f5367f6eeeeb6bd718ea12,['conda'],,https://github.com/hiroalchem/napari-large-image-importer,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-large-image-importer,http://api.anaconda.org/packages/conda-forge/napari-large-image-importer,http://anaconda.org/conda-forge/napari-large-image-importer,['0.0.2'],0.0.2,0.0.2,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.2,conda-forge/napari-large-image-importer/0.0.2,1.0,0.0,2023-02-21 21:24:12.581000+00:00,2023-06-18 17:27:39.014000+00:00,conda,noarch/napari-large-image-importer-0.0.2-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['dask-core', 'imagecodecs', 'magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'tifffile', 'zarr']",noarch,1677014545551.0,None-any-None,pyhd8ed1ab_0,2023-02-21 21:24:12.949000+00:00,0fce9e47a671080fcf187381309bff35,cfb248f0f9f1e7be5efbadcf00f892c516cdc8735149e12a100a9530d7ab7724,11947.0,conda-forge/napari-large-image-importer/0.0.2/noarch/napari-large-image-importer-0.0.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-large-image-importer/0.0.2/noarch/napari-large-image-importer-0.0.2-pyhd8ed1ab_0.conda,conda,0.0.2,conda-forge,['main'],public,,0.2.1,napari-large-image-importer.make_qwidget,Make nlii QWidget,napari_large_image_importer._widget:NliiQWidget,,,,2.1,napari-large-image-importer,0.0.2,,"Napari plugin for easy, memory-efficient import of large images.","# napari-large-image-importer [![License BSD-3](https://img.shields.io/pypi/l/napari-large-image-importer.svg?color=green)](https://github.com/hiroalchem/napari-large-image-importer/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-large-image-importer.svg?color=green)](https://pypi.org/project/napari-large-image-importer) @@ -22099,106 +23268,9 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/hiroalchem/napari-large-image-importer,Hiroki Kawai,h.kawai888@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'tifffile', 'zarr', 'dask', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/hiroalchem/napari-large-image-importer/issues', 'Documentation, https://github.com/hiroalchem/napari-large-image-importer#README.md', 'Source Code, https://github.com/hiroalchem/napari-large-image-importer', 'User Support, https://github.com/hiroalchem/napari-large-image-importer/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-large-image-importer.make_qwidget,NLII QWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -209,napari-lattice,0.2.7,Lattice Lightsheet Analysis,Napari plugin for analysing and visualizing lattice lightsheet and Oblique Plane Microscopy data.,"Pradeep Rajasekhar, Lachlan Whitehead,Robert Haase",GPL-3.0-only,https://github.com/BioimageAnalysisCoreWEHI/napari_lattice,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-lattice._dock_widget,Create napari_lattice widget,napari_lattice._dock_widget:_napari_lattice_widget_wrapper,napari-lattice.get_reader,['*.h5'],False,2.1,napari-lattice,0.2.7,,Napari plugin for analysing and visualizing lattice lightsheet and Oblique Plane Microscopy data.,"# napari-lattice - -[![License](https://img.shields.io/pypi/l/napari-lattice.svg?color=green)](https://github.com/githubuser/napari_lattice/raw/main/LICENSE) -[![PyPI](https://img.shields.io/pypi/v/napari-lattice.svg?color=green)](https://pypi.org/project/napari_lattice) -[![Python Version](https://img.shields.io/pypi/pyversions/napari-lattice.svg?color=green)](https://python.org) -[![tests](https://github.com/BioimageAnalysisCoreWEHI/napari_lattice/actions/workflows/test_and_deploy.yml/badge.svg)](https://github.com/BioimageAnalysisCoreWEHI/napari_lattice/actions/workflows/test_and_deploy.yml) -[![PyPI - Downloads](https://img.shields.io/pypi/dm/napari-lattice)](https://pypistats.org/packages/napari-lattice) -[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-lattice)](https://napari-hub.org/plugins/napari-lattice) - -This napari plugin allows deskewing, cropping, visualisation and designing custom analysis pipelines for lattice lightsheet data, particularly from the Zeiss Lattice Lightsheet. The plugin has also been otpimixed to run in headless mode. - - -## **Documentation** - -Check the [Wiki page](https://github.com/BioimageAnalysisCoreWEHI/napari_lattice/wiki) for documentation on how to get started. - - -************* - - -

- -

- -**Functions** - -* Deskewing and deconvolution of Zeiss lattice lightsheet images - * Ability to preview deskewed image at channel or timepoint of interest -* Crop and process only a small portion of the image -* Import ImageJ ROIs for cropping -* Create image processing workflows using napari-workflows -* Run deskewing, deconvolution and custom image processing workflows from the terminal -* Files can be saved as h5 (BigDataViewer/BigStitcher) or tiff files -* Run in terminal without napari, enabling processing workflows on the HPC - -**Key Features** - -Apply custom image processing workflows using `napari-workflows`. -* [Interactive workflow generation (no coding experience needed)](https://github.com/BioimageAnalysisCoreWEHI/napari_lattice/wiki/5.-Workflows-(Interactive:-no-coding)#workflow) -* [Use custom python functions/modules within workflows](https://github.com/BioimageAnalysisCoreWEHI/napari_lattice/wiki/5.1-Workflows-(Custom-workflow)) -* [How to use Cellpose for cell segmentation](https://github.com/BioimageAnalysisCoreWEHI/napari_lattice/wiki/5.1-Workflows-(Custom-workflow)#cellpose) - - -Support will be added for more file formats in the future. - -Sample lattice lightsheet data download: https://doi.org/10.5281/zenodo.7117784 - ----------------------------------- - -This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template. - - - - -## Contributing - -Contributions are very welcome. Tests can be run with [tox], please ensure -the coverage at least stays the same before you submit a pull request. - -## License - -Distributed under the terms of the [GPL-3.0 License] license, -""napari_lattice"" is free and open source software - -## Acknowledgment - - This project was supported by funding from the [Rogers Lab at the Centre for Dynamic Imaging at the Walter and Eliza Hall Institute of Medical Research](https://imaging.wehi.edu.au/). This project has been made possible in part by [Napari plugin accelerator grant](https://chanzuckerberg.com/science/programs-resources/imaging/napari/lattice-light-sheet-data-analysis-toolset/) from the Chan Zuckerberg Initiative DAF, an advised fund of the Silicon Valley Community Foundation. - - Thanks to the developers and maintainers of the amazing open-source plugins such as [pyclesperanto](https://github.com/clEsperanto/pyclesperanto_prototype), [aicsimageio](https://github.com/AllenCellModeling/aicsimageio), [dask](https://github.com/dask/dask) and [pycudadecon](https://github.com/tlambert03/pycudadecon). - Thanks in particular to the developers of open source projects: [LLSpy](https://github.com/tlambert03/LLSpy) and [lls_dd](https://github.com/VolkerH/Lattice_Lightsheet_Deskew_Deconv) as they were referred to extensively for developing napari-lattice. - Thanks to the imagesc forum! - -## Issues - -If you encounter any problems, please [file an issue](https://github.com/BioimageAnalysisCoreWEHI/napari_lattice/issues) along with a detailed description. - -[napari]: https://github.com/napari/napari -[Cookiecutter]: https://github.com/audreyr/cookiecutter -[@napari]: https://github.com/napari -[MIT]: http://opensource.org/licenses/MIT -[BSD-3]: http://opensource.org/licenses/BSD-3-Clause -[GGPL-3.0 License]: http://www.gnu.org/licenses/gpl-3.0.txt -[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt -[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0 -[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt -[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin - -[napari]: https://github.com/napari/napari -[tox]: https://tox.readthedocs.io/en/latest/ -[pip]: https://pypi.org/project/pip/ -[PyPI]: https://pypi.org/ -",text/markdown,https://github.com/BioimageAnalysisCoreWEHI/napari_lattice,"Pradeep Rajasekhar, Lachlan Whitehead,Robert Haase",bioimageanalysis@wehi.edu.au,GPL-3.0-only,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']","['aicsimageio (>=4.9.1)', 'aicspylibczi (>=3.0.5)', 'dask', 'dask-image', 'dask[distributed]', 'magic-class (>=0.6.13)', 'magicgui', 'napari[all]', 'pyopencl', 'read-roi', 'gputools', 'pyclesperanto-prototype (>=0.20.0)', 'napari-aicsimageio (>=0.7.2)', 'napari-spreadsheet', 'napari-workflows (>=0.2.8)', 'napari-workflow-inspector', 'npy2bdv', 'redlionfish', 'tifffile', 'fsspec (>=2022.8.2)', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/BioimageAnalysisCoreWEHI/napari_lattice/issues', 'Documentation, https://github.com/BioimageAnalysisCoreWEHI/napari_lattice/wiki', 'Source Code, https://github.com/BioimageAnalysisCoreWEHI/napari_lattice', 'User Support, https://github.com/BioimageAnalysisCoreWEHI/napari_lattice/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-lattice.get_reader,BDV H5 reader,napari_lattice._reader:napari_get_reader,,,,,,,napari-lattice._dock_widget,Lattice Lightsheet Analysis,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -210,napari-layer-details-display,0.1.5,napari-layer-details-display,A display for layer information and properties,Robert Haase,BSD-3-Clause,https://github.com/haesleinhuepf/napari-layer-details-display,61fd20ea414b5ba20e36f0e1,['conda'],,https://github.com/haesleinhuepf/napari-layer-details-display,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-layer-details-display,http://api.anaconda.org/packages/conda-forge/napari-layer-details-display,http://anaconda.org/conda-forge/napari-layer-details-display,"['0.1.2', '0.1.3', '0.1.4', '0.1.5']",0.1.5,0.1.5,['noarch'],6.0,,['pyhd8ed1ab_0'],0.1.2,conda-forge/napari-layer-details-display/0.1.2,1.0,0.0,2022-02-04 12:49:43.130000+00:00,2023-06-18 08:40:46.702000+00:00,conda,noarch/napari-layer-details-display-0.1.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'python >=3.7']",noarch,1643978817770.0,None-any-None,pyhd8ed1ab_0,2022-02-04 12:49:44.222000+00:00,52c5c105bd875c334f193c06b7f347aa,None,9327.0,conda-forge/napari-layer-details-display/0.1.2/noarch/napari-layer-details-display-0.1.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-layer-details-display/0.1.2/noarch/napari-layer-details-display-0.1.2-pyhd8ed1ab_0.tar.bz2,conda,0.1.2,conda-forge,['main'],public,,0.2.1,napari-layer-details-display.LayerDetailsDisplay,LayerDetailsDisplay,napari_layer_details_display._dock_widget:LayerDetailsDisplay,,,,2.1,napari-layer-details-display,0.1.5,,A display for layer information and properties,"# napari-layer-details-display +",text/markdown,https://github.com/hiroalchem/napari-large-image-importer,Hiroki Kawai,h.kawai888@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'tifffile', 'zarr', 'dask', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/hiroalchem/napari-large-image-importer/issues', 'Documentation, https://github.com/hiroalchem/napari-large-image-importer#README.md', 'Source Code, https://github.com/hiroalchem/napari-large-image-importer', 'User Support, https://github.com/hiroalchem/napari-large-image-importer/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-large-image-importer.make_qwidget,NLII QWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +220,napari-lattice,1.0.0,Lattice Lightsheet Analysis,Napari plugin for analysing and visualizing lattice lightsheet and Oblique Plane Microscopy data.,"Pradeep Rajasekhar, Lachlan Whitehead, Robert Haase, Michael Milton",GPL-3.0-only,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-lattice.dock_widget,Create napari_lattice widget,napari_lattice.dock_widget:LLSZWidget,napari-lattice.get_reader,['*.h5'],False,2.1,napari-lattice,1.0.0,,Napari plugin for analysing and visualizing lattice lightsheet and Oblique Plane Microscopy data.,,text/markdown,,"Pradeep Rajasekhar, Lachlan Whitehead, Robert Haase, Michael Milton",,GPL-3.0-only,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']","['aicsimageio>=4.6.3', 'dask[distributed]', 'fsspec>=2022.8.2', 'importlib-resources', 'lls-core', 'magic-class<0.8.0,>=0.7.5', 'magicgui<0.8.0', 'napari-spreadsheet', 'napari-workflow-inspector', 'napari-workflows>=0.2.8', 'napari>=0.4.11', 'npy2bdv', 'numpy', 'psutil', 'pyclesperanto-prototype>=0.20.0', 'pydantic', 'qtpy', 'typing-extensions>=4.7.0', 'rich', 'StrEnum', 'xarray', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""']",>=3.8,"['Repository, https://github.com/BioimageAnalysisCoreWEHI/napari_lattice', 'BugTracker, https://github.com/BioimageAnalysisCoreWEHI/napari_lattice/issues', 'Documentation, https://github.com/BioimageAnalysisCoreWEHI/napari_lattice/wiki', 'SourceCode, https://github.com/BioimageAnalysisCoreWEHI/napari_lattice', 'UserSupport, https://github.com/BioimageAnalysisCoreWEHI/napari_lattice/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-lattice.get_reader,BDV H5 reader,napari_lattice._reader:napari_get_reader,,,,,,,napari-lattice.dock_widget,Lattice Lightsheet Analysis,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +221,napari-layer-details-display,0.1.5,napari-layer-details-display,A display for layer information and properties,Robert Haase,BSD-3-Clause,https://github.com/haesleinhuepf/napari-layer-details-display,61fd20ea414b5ba20e36f0e1,['conda'],,https://github.com/haesleinhuepf/napari-layer-details-display,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-layer-details-display,http://api.anaconda.org/packages/conda-forge/napari-layer-details-display,http://anaconda.org/conda-forge/napari-layer-details-display,"['0.1.2', '0.1.3', '0.1.4', '0.1.5']",0.1.5,0.1.5,['noarch'],6.0,,['pyhd8ed1ab_0'],0.1.2,conda-forge/napari-layer-details-display/0.1.2,1.0,0.0,2022-02-04 12:49:43.130000+00:00,2023-06-18 08:40:46.702000+00:00,conda,noarch/napari-layer-details-display-0.1.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'python >=3.7']",noarch,1643978817770.0,None-any-None,pyhd8ed1ab_0,2022-02-04 12:49:44.222000+00:00,52c5c105bd875c334f193c06b7f347aa,None,9327.0,conda-forge/napari-layer-details-display/0.1.2/noarch/napari-layer-details-display-0.1.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-layer-details-display/0.1.2/noarch/napari-layer-details-display-0.1.2-pyhd8ed1ab_0.tar.bz2,conda,0.1.2,conda-forge,['main'],public,,0.2.1,napari-layer-details-display.LayerDetailsDisplay,LayerDetailsDisplay,napari_layer_details_display._dock_widget:LayerDetailsDisplay,,,,2.1,napari-layer-details-display,0.1.5,,A display for layer information and properties,"# napari-layer-details-display [![License](https://img.shields.io/pypi/l/napari-layer-details-display.svg?color=green)](https://github.com/haesleinhuepf/napari-layer-details-display/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-layer-details-display.svg?color=green)](https://pypi.org/project/napari-layer-details-display) @@ -22259,8 +23331,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/haesleinhuepf/napari-layer-details-display,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari-tools-menu']",>=3.7,"['Bug Tracker, https://github.com/haesleinhuepf/napari-layer-details-display/issues', 'Documentation, https://github.com/haesleinhuepf/napari-layer-details-display#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-layer-details-display', 'User Support, https://github.com/haesleinhuepf/napari-layer-details-display/issues']",,True,0.1.3,conda-forge/napari-layer-details-display/0.1.3,0.1.4,conda-forge/napari-layer-details-display/0.1.4,0.1.5,conda-forge/napari-layer-details-display/0.1.5,conda,noarch/napari-layer-details-display-0.1.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'python >=3.7']",pyhd8ed1ab_0,1654524943589.0,None-any-None,noarch,2022-06-06 14:18:15.300000+00:00,962510250db78ff1dada8d3ab2c2fe98,None,9384.0,conda-forge/napari-layer-details-display/0.1.3/noarch/napari-layer-details-display-0.1.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-layer-details-display/0.1.3/noarch/napari-layer-details-display-0.1.3-pyhd8ed1ab_0.tar.bz2,conda,0.1.3,conda-forge,['main'],conda,noarch/napari-layer-details-display-0.1.4-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'python >=3.7']",noarch,1657479408059.0,None-any-None,pyhd8ed1ab_0,2022-07-10 18:59:00.041000+00:00,a3f46f019436e7ae597af64d667969aa,None,9636.0,conda-forge/napari-layer-details-display/0.1.4/noarch/napari-layer-details-display-0.1.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-layer-details-display/0.1.4/noarch/napari-layer-details-display-0.1.4-pyhd8ed1ab_0.tar.bz2,conda,0.1.4,conda-forge,['main'],conda,noarch/napari-layer-details-display-0.1.5-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'python >=3.7']",BSD-3-Clause,python,1676537760159.0,2023-02-16 08:57:55.272000+00:00,ed9158fa0919458e47fa9a68b3815201,033498443a291dbd417b8acef269240b7c47f8fa4a50b0c55056a6c02f1519f7,11216.0,conda-forge/napari-layer-details-display/0.1.5/noarch/napari-layer-details-display-0.1.5-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-layer-details-display/0.1.5/noarch/napari-layer-details-display-0.1.5-pyhd8ed1ab_0.conda,conda,0.1.5,conda-forge,['main'],,,,,,,,,,,napari-layer-details-display.LayerDetailsDisplay,LayerDetailsDisplay,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -211,napari-layer-table,0.0.13,Layer Table,A plugin to display a layer as a table.,Robert Cudmore,GPL-3.0-only,https://github.com/mapmanager/napari-layer-table,62c69e258b75ac98a7643bb3,['conda'],,https://github.com/mapmanager/napari-layer-table,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-layer-table,http://api.anaconda.org/packages/conda-forge/napari-layer-table,http://anaconda.org/conda-forge/napari-layer-table,"['0.0.7', '0.0.9', '0.0.10']",0.0.10,0.0.10,['noarch'],5.0,,['pyhd8ed1ab_0'],0.0.7,conda-forge/napari-layer-table/0.0.7,1.0,0.0,2022-07-07 08:49:38.892000+00:00,2023-06-18 08:42:02.423000+00:00,conda,noarch/napari-layer-table-0.0.7-pyhd8ed1ab_0.tar.bz2,0.0,GPL-3.0-or-later,False,python,"['napari', 'numpy', 'pandas', 'python >=3.7', 'qtpy']",noarch,1657183627423.0,None-any-None,pyhd8ed1ab_0,2022-07-07 08:49:39.389000+00:00,1f03a91c8f924427b7c25c55e49ca95d,None,42209.0,conda-forge/napari-layer-table/0.0.7/noarch/napari-layer-table-0.0.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-layer-table/0.0.7/noarch/napari-layer-table-0.0.7-pyhd8ed1ab_0.tar.bz2,conda,0.0.7,conda-forge,['main'],public,,0.2.1,napari-layer-table.make_my_qwidget,Layer Table Plugin,napari_layer_table._my_widget:LayerTablePlugin,,,,2.1,napari-layer-table,0.0.13,,A plugin to display a layer as a table.,"# napari-layer-table +",text/markdown,https://github.com/haesleinhuepf/napari-layer-details-display,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari-tools-menu']",>=3.7,"['Bug Tracker, https://github.com/haesleinhuepf/napari-layer-details-display/issues', 'Documentation, https://github.com/haesleinhuepf/napari-layer-details-display#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-layer-details-display', 'User Support, https://github.com/haesleinhuepf/napari-layer-details-display/issues']",,True,0.1.3,conda-forge/napari-layer-details-display/0.1.3,0.1.4,conda-forge/napari-layer-details-display/0.1.4,0.1.5,conda-forge/napari-layer-details-display/0.1.5,conda,noarch/napari-layer-details-display-0.1.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'python >=3.7']",pyhd8ed1ab_0,1654524943589.0,None-any-None,noarch,2022-06-06 14:18:15.300000+00:00,962510250db78ff1dada8d3ab2c2fe98,None,9384.0,conda-forge/napari-layer-details-display/0.1.3/noarch/napari-layer-details-display-0.1.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-layer-details-display/0.1.3/noarch/napari-layer-details-display-0.1.3-pyhd8ed1ab_0.tar.bz2,conda,0.1.3,conda-forge,['main'],conda,noarch/napari-layer-details-display-0.1.4-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'python >=3.7']",noarch,1657479408059.0,None-any-None,pyhd8ed1ab_0,2022-07-10 18:59:00.041000+00:00,a3f46f019436e7ae597af64d667969aa,None,9636.0,conda-forge/napari-layer-details-display/0.1.4/noarch/napari-layer-details-display-0.1.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-layer-details-display/0.1.4/noarch/napari-layer-details-display-0.1.4-pyhd8ed1ab_0.tar.bz2,conda,0.1.4,conda-forge,['main'],conda,noarch/napari-layer-details-display-0.1.5-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'python >=3.7']",BSD-3-Clause,python,1676537760159.0,2023-02-16 08:57:55.272000+00:00,ed9158fa0919458e47fa9a68b3815201,033498443a291dbd417b8acef269240b7c47f8fa4a50b0c55056a6c02f1519f7,11216.0,conda-forge/napari-layer-details-display/0.1.5/noarch/napari-layer-details-display-0.1.5-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-layer-details-display/0.1.5/noarch/napari-layer-details-display-0.1.5-pyhd8ed1ab_0.conda,conda,0.1.5,conda-forge,['main'],,,,,,,,,,,napari-layer-details-display.LayerDetailsDisplay,LayerDetailsDisplay,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +222,napari-layer-table,0.0.13,Layer Table,A plugin to display a layer as a table.,Robert Cudmore,GPL-3.0-only,https://github.com/mapmanager/napari-layer-table,62c69e258b75ac98a7643bb3,['conda'],,https://github.com/mapmanager/napari-layer-table,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-layer-table,http://api.anaconda.org/packages/conda-forge/napari-layer-table,http://anaconda.org/conda-forge/napari-layer-table,"['0.0.7', '0.0.9', '0.0.10']",0.0.10,0.0.10,['noarch'],5.0,,['pyhd8ed1ab_0'],0.0.7,conda-forge/napari-layer-table/0.0.7,1.0,0.0,2022-07-07 08:49:38.892000+00:00,2023-06-18 08:42:02.423000+00:00,conda,noarch/napari-layer-table-0.0.7-pyhd8ed1ab_0.tar.bz2,0.0,GPL-3.0-or-later,False,python,"['napari', 'numpy', 'pandas', 'python >=3.7', 'qtpy']",noarch,1657183627423.0,None-any-None,pyhd8ed1ab_0,2022-07-07 08:49:39.389000+00:00,1f03a91c8f924427b7c25c55e49ca95d,None,42209.0,conda-forge/napari-layer-table/0.0.7/noarch/napari-layer-table-0.0.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-layer-table/0.0.7/noarch/napari-layer-table-0.0.7-pyhd8ed1ab_0.tar.bz2,conda,0.0.7,conda-forge,['main'],public,,0.2.1,napari-layer-table.make_my_qwidget,Layer Table Plugin,napari_layer_table._my_widget:LayerTablePlugin,,,,2.1,napari-layer-table,0.0.13,,A plugin to display a layer as a table.,"# napari-layer-table [![License: GPL v3](https://img.shields.io/badge/License-GPLv3-blue.svg)](https://www.gnu.org/licenses/gpl-3.0) [![PyPI version](https://badge.fury.io/py/napari-layer-table.svg)](https://badge.fury.io/py/napari-layer-table) @@ -22363,8 +23435,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/mapmanager/napari-layer-table,Robert Cudmore,rhcudmore@ucdavis.edu,GPL-3.0-only,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']",['numpy'],>=3.9,"['Bug Tracker, https://github.com/mapmanager/napari-layer-table/issues', 'Documentation, https://github.com/mapmanager/napari-layer-table#README.md', 'Source Code, https://github.com/mapmanager/napari-layer-table', 'User Support, https://github.com/mapmanager/napari-layer-table/issues']",,False,0.0.9,conda-forge/napari-layer-table/0.0.9,0.0.10,conda-forge/napari-layer-table/0.0.10,,,conda,noarch/napari-layer-table-0.0.9-pyhd8ed1ab_0.tar.bz2,0.0,GPL-3.0-or-later,False,python,"['napari', 'numpy', 'pandas', 'python >=3.7', 'qtpy']",pyhd8ed1ab_0,1666569556171.0,None-any-None,noarch,2022-10-24 00:01:34.491000+00:00,b986d022886a0eb86f6d48afbf21bf34,None,56751.0,conda-forge/napari-layer-table/0.0.9/noarch/napari-layer-table-0.0.9-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-layer-table/0.0.9/noarch/napari-layer-table-0.0.9-pyhd8ed1ab_0.tar.bz2,conda,0.0.9,conda-forge,['main'],conda,noarch/napari-layer-table-0.0.10-pyhd8ed1ab_0.tar.bz2,0.0,GPL-3.0-or-later,False,python,"['napari', 'numpy', 'pandas', 'python >=3.7', 'qtpy']",noarch,1666577308904.0,None-any-None,pyhd8ed1ab_0,2022-10-24 02:10:25.963000+00:00,bbea4e320fe59ca162219051b501d827,None,56790.0,conda-forge/napari-layer-table/0.0.10/noarch/napari-layer-table-0.0.10-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-layer-table/0.0.10/noarch/napari-layer-table-0.0.10-pyhd8ed1ab_0.tar.bz2,conda,0.0.10,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-layer-table.make_my_qwidget,Layer Table,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -212,napari-lazy-openslide,0.3.0,napari-lazy-openslide,A plugin to lazily load multiscale whole-slide images with openslide and dask,Trevor Manz,BSD-3,https://github.com/manzt/napari-lazy-openslide,620e4219019cbc148a1f7484,['conda'],,https://github.com/manzt/napari-lazy-openslide,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-lazy-openslide,http://api.anaconda.org/packages/conda-forge/napari-lazy-openslide,http://anaconda.org/conda-forge/napari-lazy-openslide,"['0.2.0', '0.3.0']",0.3.0,0.3.0,['noarch'],4.0,,['pyhd8ed1ab_0'],0.2.0,conda-forge/napari-lazy-openslide/0.2.0,1.0,0.0,2022-02-17 12:39:51.001000+00:00,2023-06-18 08:40:53.268000+00:00,conda,noarch/napari-lazy-openslide-0.2.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core >=2.20.0', 'napari-plugin-engine >=0.1.4', 'numpy >=1.19', 'openslide-python >=1.1.2', 'python >=3.6', 'zarr >=0.2.4']",noarch,1645101539212.0,None-any-None,pyhd8ed1ab_0,2022-02-17 12:39:51.569000+00:00,05ed496eb6fd0166a2a08c058c8423a0,None,11049.0,conda-forge/napari-lazy-openslide/0.2.0/noarch/napari-lazy-openslide-0.2.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-lazy-openslide/0.2.0/noarch/napari-lazy-openslide-0.2.0-pyhd8ed1ab_0.tar.bz2,conda,0.2.0,conda-forge,['main'],public,,0.2.1,napari-lazy-openslide.napari_get_reader,napari_get_reader,napari_lazy_openslide.lazy_openslide:napari_get_reader,napari-lazy-openslide.napari_get_reader,['*'],True,2.1,napari-lazy-openslide,0.3.0,,A plugin to lazily load multiscale whole-slide images with openslide and dask,"# napari-lazy-openslide +",text/markdown,https://github.com/mapmanager/napari-layer-table,Robert Cudmore,rhcudmore@ucdavis.edu,GPL-3.0-only,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']",['numpy'],>=3.9,"['Bug Tracker, https://github.com/mapmanager/napari-layer-table/issues', 'Documentation, https://github.com/mapmanager/napari-layer-table#README.md', 'Source Code, https://github.com/mapmanager/napari-layer-table', 'User Support, https://github.com/mapmanager/napari-layer-table/issues']",,False,0.0.9,conda-forge/napari-layer-table/0.0.9,0.0.10,conda-forge/napari-layer-table/0.0.10,,,conda,noarch/napari-layer-table-0.0.9-pyhd8ed1ab_0.tar.bz2,0.0,GPL-3.0-or-later,False,python,"['napari', 'numpy', 'pandas', 'python >=3.7', 'qtpy']",pyhd8ed1ab_0,1666569556171.0,None-any-None,noarch,2022-10-24 00:01:34.491000+00:00,b986d022886a0eb86f6d48afbf21bf34,None,56751.0,conda-forge/napari-layer-table/0.0.9/noarch/napari-layer-table-0.0.9-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-layer-table/0.0.9/noarch/napari-layer-table-0.0.9-pyhd8ed1ab_0.tar.bz2,conda,0.0.9,conda-forge,['main'],conda,noarch/napari-layer-table-0.0.10-pyhd8ed1ab_0.tar.bz2,0.0,GPL-3.0-or-later,False,python,"['napari', 'numpy', 'pandas', 'python >=3.7', 'qtpy']",noarch,1666577308904.0,None-any-None,pyhd8ed1ab_0,2022-10-24 02:10:25.963000+00:00,bbea4e320fe59ca162219051b501d827,None,56790.0,conda-forge/napari-layer-table/0.0.10/noarch/napari-layer-table-0.0.10-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-layer-table/0.0.10/noarch/napari-layer-table-0.0.10-pyhd8ed1ab_0.tar.bz2,conda,0.0.10,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-layer-table.make_my_qwidget,Layer Table,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +223,napari-lazy-openslide,0.3.0,napari-lazy-openslide,A plugin to lazily load multiscale whole-slide images with openslide and dask,Trevor Manz,BSD-3,https://github.com/manzt/napari-lazy-openslide,620e4219019cbc148a1f7484,['conda'],,https://github.com/manzt/napari-lazy-openslide,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-lazy-openslide,http://api.anaconda.org/packages/conda-forge/napari-lazy-openslide,http://anaconda.org/conda-forge/napari-lazy-openslide,"['0.2.0', '0.3.0']",0.3.0,0.3.0,['noarch'],4.0,,['pyhd8ed1ab_0'],0.2.0,conda-forge/napari-lazy-openslide/0.2.0,1.0,0.0,2022-02-17 12:39:51.001000+00:00,2023-06-18 08:40:53.268000+00:00,conda,noarch/napari-lazy-openslide-0.2.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core >=2.20.0', 'napari-plugin-engine >=0.1.4', 'numpy >=1.19', 'openslide-python >=1.1.2', 'python >=3.6', 'zarr >=0.2.4']",noarch,1645101539212.0,None-any-None,pyhd8ed1ab_0,2022-02-17 12:39:51.569000+00:00,05ed496eb6fd0166a2a08c058c8423a0,None,11049.0,conda-forge/napari-lazy-openslide/0.2.0/noarch/napari-lazy-openslide-0.2.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-lazy-openslide/0.2.0/noarch/napari-lazy-openslide-0.2.0-pyhd8ed1ab_0.tar.bz2,conda,0.2.0,conda-forge,['main'],public,,0.2.1,napari-lazy-openslide.napari_get_reader,napari_get_reader,napari_lazy_openslide.lazy_openslide:napari_get_reader,napari-lazy-openslide.napari_get_reader,['*'],True,2.1,napari-lazy-openslide,0.3.0,,A plugin to lazily load multiscale whole-slide images with openslide and dask,"# napari-lazy-openslide [![License](https://img.shields.io/pypi/l/napari-lazy-openslide.svg?color=green)](https://github.com/manzt/napari-lazy-openslide/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-lazy-openslide.svg?color=green)](https://pypi.org/project/napari-lazy-openslide) @@ -22461,8 +23533,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin [file an issue]: https://github.com/manzt/napari-lazy-openslide/issues [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/manzt/napari-lazy-openslide,Trevor Manz,trevor.j.manz@gmail.com,BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License', 'Framework :: napari']","['napari-plugin-engine (>=0.1.4)', 'zarr (>=2.11.0)', 'numpy', 'dask[array]', 'openslide-python']",>=3.6,,,True,0.3.0,conda-forge/napari-lazy-openslide/0.3.0,,,,,conda,noarch/napari-lazy-openslide-0.3.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core >=2.20.0', 'napari-plugin-engine >=0.1.4', 'numpy >=1.19', 'openslide-python >=1.1.2', 'python >=3.6', 'zarr >=0.2.4']",pyhd8ed1ab_0,1653043627893.0,None-any-None,noarch,2022-05-20 10:47:54.773000+00:00,7ebdc50c1c6b648d6d35c306bb5d95a4,None,11213.0,conda-forge/napari-lazy-openslide/0.3.0/noarch/napari-lazy-openslide-0.3.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-lazy-openslide/0.3.0/noarch/napari-lazy-openslide-0.3.0-pyhd8ed1ab_0.tar.bz2,conda,0.3.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -213,napari-LF,0.1.6,napari LF,Light field imaging plugin for napari,"Geneva Schlafly, Amitabh Verma, Rudolf Oldenbourg",BSD-3-Clause,https://github.com/PolarizedLightFieldMicroscopy/napari-LF,65593e4edb93048ed8d4eb9c,['conda'],,https://pypi.org/project/napari-LF,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-lf,http://api.anaconda.org/packages/conda-forge/napari-lf,http://anaconda.org/conda-forge/napari-lf,['0.1.6'],0.1.6,0.1.6,['noarch'],3.0,https://github.com/PolarizedLightFieldMicroscopy/napari-LF,['pyh9208f05_0'],0.1.6,conda-forge/napari-lf/0.1.6,1.0,0.0,2023-11-18 22:44:27.579000+00:00,2023-11-18 22:44:30.832000+00:00,conda,noarch/napari-lf-0.1.6-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['h5py', 'magicgui', 'napari', 'numpy', 'opencv', 'pyopencl', 'python >=3.7', 'pytorch', 'pytorch-lightning', 'qtpy', 'rpy2', 'scipy', 'tifffile', 'torchvision', 'tqdm']",noarch,1700347220121.0,None-any-None,pyh9208f05_0,2023-11-18 22:44:28.069000+00:00,b11e11b05a398b03cf9a21e61b9f9860,8a9e03a6b28dcf111002c5f430dc82297ef333d9ed677b031e971d224e5e1c71,25219102.0,conda-forge/napari-lf/0.1.6/noarch/napari-lf-0.1.6-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-lf/0.1.6/noarch/napari-lf-0.1.6-pyh9208f05_0.conda,conda,0.1.6,conda-forge,['main'],public,,0.2.1,napari-LF.get_reader,Open data with napari LF,napari_lf._reader:napari_get_reader,napari-LF.get_reader,['*.npy'],False,2.1,napari-LF,0.1.6,,Light field imaging plugin for napari,"# napari-LF +",text/markdown,https://github.com/manzt/napari-lazy-openslide,Trevor Manz,trevor.j.manz@gmail.com,BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License', 'Framework :: napari']","['napari-plugin-engine (>=0.1.4)', 'zarr (>=2.11.0)', 'numpy', 'dask[array]', 'openslide-python']",>=3.6,,,True,0.3.0,conda-forge/napari-lazy-openslide/0.3.0,,,,,conda,noarch/napari-lazy-openslide-0.3.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core >=2.20.0', 'napari-plugin-engine >=0.1.4', 'numpy >=1.19', 'openslide-python >=1.1.2', 'python >=3.6', 'zarr >=0.2.4']",pyhd8ed1ab_0,1653043627893.0,None-any-None,noarch,2022-05-20 10:47:54.773000+00:00,7ebdc50c1c6b648d6d35c306bb5d95a4,None,11213.0,conda-forge/napari-lazy-openslide/0.3.0/noarch/napari-lazy-openslide-0.3.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-lazy-openslide/0.3.0/noarch/napari-lazy-openslide-0.3.0-pyhd8ed1ab_0.tar.bz2,conda,0.3.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +224,napari-LF,0.1.7,napari LF,Light field imaging plugin for napari,"Geneva Schlafly, Amitabh Verma, Rudolf Oldenbourg",BSD-3-Clause,https://github.com/PolarizedLightFieldMicroscopy/napari-LF,65593e4edb93048ed8d4eb9c,['conda'],,https://pypi.org/project/napari-LF,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-lf,http://api.anaconda.org/packages/conda-forge/napari-lf,http://anaconda.org/conda-forge/napari-lf,['0.1.6'],0.1.6,0.1.6,['noarch'],3.0,https://github.com/PolarizedLightFieldMicroscopy/napari-LF,['pyh9208f05_0'],0.1.6,conda-forge/napari-lf/0.1.6,1.0,0.0,2023-11-18 22:44:27.579000+00:00,2023-11-18 22:44:30.832000+00:00,conda,noarch/napari-lf-0.1.6-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['h5py', 'magicgui', 'napari', 'numpy', 'opencv', 'pyopencl', 'python >=3.7', 'pytorch', 'pytorch-lightning', 'qtpy', 'rpy2', 'scipy', 'tifffile', 'torchvision', 'tqdm']",noarch,1700347220121.0,None-any-None,pyh9208f05_0,2023-11-18 22:44:28.069000+00:00,b11e11b05a398b03cf9a21e61b9f9860,8a9e03a6b28dcf111002c5f430dc82297ef333d9ed677b031e971d224e5e1c71,25219102.0,conda-forge/napari-lf/0.1.6/noarch/napari-lf-0.1.6-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-lf/0.1.6/noarch/napari-lf-0.1.6-pyh9208f05_0.conda,conda,0.1.6,conda-forge,['main'],public,,0.2.1,napari-LF.get_reader,Open data with napari LF,napari_lf._reader:napari_get_reader,napari-LF.get_reader,['*.npy'],False,2.1,napari-LF,0.1.7,,Light field imaging plugin for napari,"# napari-LF [![License](https://img.shields.io/pypi/l/napari-LF.svg?color=green)](https://github.com/PolarizedLightFieldMicroscopy/napari-LF/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-LF.svg?color=green)](https://pypi.org/project/napari-LF) @@ -22561,7 +23633,7 @@ From the napari menu, select **Plugins > Main Menu (napari-LF)**. Note that you Create a virtual environment from the command line for napari with the python libraries necessary for the light field plugin: - conda create --name napari-lf python==3.9 + conda create -y -n napari-lf -c conda-forge python==3.9 conda activate napari-lf Clone the github repository: @@ -22571,6 +23643,10 @@ Clone the github repository: cd napari-LF pip install -e . +The necessary dependencies should be installed automatically with `napari-LF`. If for some reason `pyopencl` does not get installed properly, try installing with conda: + + conda install -c conda-forge pyopencl + ## Contributing Contributions are very welcome. Tests can be run with [tox], please ensure @@ -22602,8 +23678,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/PolarizedLightFieldMicroscopy/napari-LF,"Geneva Schlafly, Amitabh Verma, Rudolf Oldenbourg","gschlafly@uchicago.edu, averma@mbl.edu, rudolfo@mbl.edu",BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['numpy', 'h5py', 'pyopencl', 'napari[all]', 'opencv-python', 'torch', 'torchvision', 'pytorch-lightning']",>=3.7,"['Bug Tracker, https://github.com/PolarizedLightFieldMicroscopy/napari-LF/issues', 'Documentation, https://github.com/PolarizedLightFieldMicroscopy/napari-LF#README.md', 'Source Code, https://github.com/PolarizedLightFieldMicroscopy/napari-LF', 'User Support, https://github.com/PolarizedLightFieldMicroscopy/napari-LF/issues']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-LF.write_multiple,Save multi-layer data with napari LF,napari_lf._writer:write_multiple,napari-LF.write_single_image,Save image data with napari LF,napari_lf._writer:write_single_image,napari-LF.make_sample_data,Load sample data from napari LF,napari_lf._sample_data:make_sample_data,napari-LF.make_lfqwidget,Main Menu,False,,,,,,,,,,napari-LF.make_lfqwidget,LF-Analyze,napari_lf._widgetLF:LFQWidget,napari-LF.write_multiple,"['image*', 'labels*']",,napari-LF.write_single_image,['image'],['.npy'],,napari-LF.make_sample_data,unique_id.1,napari LF,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-LF.make_qwidget,Make example QWidget,napari_lf._widget:ExampleQWidget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-LF.make_magic_widget,Make example magic widget,napari_lf._widget:example_magic_widget,napari-LF.make_func_widget,Make example function widget,napari_lf._widget:example_function_widget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -214,napari-listener,0.1.0b1.post1,Napari Listener,Control napari via local socket.,Ashley Anderson,MIT,https://github.com/aganders3/napari-listener,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-listener.start_listening,Start Listening,napari_listener:SocketWidget,,,,2.1,napari-listener,0.1.0b1.post1,,Control napari via local socket.,"# napari-listener +",text/markdown,https://github.com/PolarizedLightFieldMicroscopy/napari-LF,"Geneva Schlafly, Amitabh Verma, Rudolf Oldenbourg","gschlafly@uchicago.edu, averma@mbl.edu, rudolfo@mbl.edu",BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['numpy', 'h5py', 'pyopencl', 'napari[all]', 'opencv-python', 'torch', 'torchvision', 'pytorch-lightning']",>=3.7,"['Bug Tracker, https://github.com/PolarizedLightFieldMicroscopy/napari-LF/issues', 'Documentation, https://github.com/PolarizedLightFieldMicroscopy/napari-LF#README.md', 'Source Code, https://github.com/PolarizedLightFieldMicroscopy/napari-LF', 'User Support, https://github.com/PolarizedLightFieldMicroscopy/napari-LF/issues']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-LF.write_multiple,Save multi-layer data with napari LF,napari_lf._writer:write_multiple,napari-LF.write_single_image,Save image data with napari LF,napari_lf._writer:write_single_image,napari-LF.make_sample_data,Load sample data from napari LF,napari_lf._sample_data:make_sample_data,napari-LF.make_lfqwidget,Main Menu,False,,,,,,,,,,napari-LF.make_lfqwidget,LF-Analyze,napari_lf._widgetLF:LFQWidget,napari-LF.write_multiple,"['image*', 'labels*']",,napari-LF.write_single_image,['image'],['.npy'],,napari-LF.make_sample_data,unique_id.1,napari LF,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-LF.make_qwidget,Make example QWidget,napari_lf._widget:ExampleQWidget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-LF.make_magic_widget,Make example magic widget,napari_lf._widget:example_magic_widget,napari-LF.make_func_widget,Make example function widget,napari_lf._widget:example_function_widget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +225,napari-listener,0.1.0b1.post1,Napari Listener,Control napari via local socket.,Ashley Anderson,MIT,https://github.com/aganders3/napari-listener,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-listener.start_listening,Start Listening,napari_listener:SocketWidget,,,,2.1,napari-listener,0.1.0b1.post1,,Control napari via local socket.,"# napari-listener [![License MIT](https://img.shields.io/pypi/l/napari-listener.svg?color=green)](https://github.com/aganders3/napari-listener/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-listener.svg?color=green)](https://pypi.org/project/napari-listener) @@ -22673,8 +23749,8 @@ description. [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/aganders3/napari-listener,Ashley Anderson,aandersoniii@chanzuckerberg.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11']","['napari', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/aganders3/napari-listener/issues', 'Documentation, https://github.com/aganders3/napari-listener#README.md', 'Source Code, https://github.com/aganders3/napari-listener', 'User Support, https://github.com/aganders3/napari-listener/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-listener.start_listening,Start Listening,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -215,napari-live-flim,0.1.1,Napari Live Flim,A plugin for real-time FLIM analysis,Kevin Tan,GPL-3.0-only,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-live-flim.open,FLIM Viewer,napari_live_flim:FlimViewer,,,,2.1,napari-live-flim,0.1.1,,A plugin for real-time FLIM analysis,"# napari-live-flim +",text/markdown,https://github.com/aganders3/napari-listener,Ashley Anderson,aandersoniii@chanzuckerberg.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11']","['napari', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/aganders3/napari-listener/issues', 'Documentation, https://github.com/aganders3/napari-listener#README.md', 'Source Code, https://github.com/aganders3/napari-listener', 'User Support, https://github.com/aganders3/napari-listener/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-listener.start_listening,Start Listening,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +226,napari-live-flim,0.1.1,Napari Live Flim,A plugin for real-time FLIM analysis,Kevin Tan,GPL-3.0-only,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-live-flim.open,FLIM Viewer,napari_live_flim:FlimViewer,,,,2.1,napari-live-flim,0.1.1,,A plugin for real-time FLIM analysis,"# napari-live-flim [![License GNU GPL v3.0](https://img.shields.io/pypi/l/napari-live-flim.svg?color=green)](https://github.com/uw-loci/napari-live-flim/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-live-flim.svg?color=green)](https://pypi.org/project/napari-live-flim) @@ -22757,8 +23833,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,,Kevin Tan,kktangent@gmail.com,GPL-3.0-only,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['dataclasses-json', 'flimlib', 'magicgui', 'matplotlib', 'numpy', 'qtpy', 'scipy', 'superqt', 'vispy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-live-flim.open,FLIM Viewer,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -216,napari-live-recording,0.3.8,napari-live-recording,A napari plugin for live video recording with a generic camera device.,"""Jacopo Abramo, Pia Pritzke, Felix Wanitschke""",MIT,https://github.com/jethro33/napari-live-recording,61fa7c9d39552dcb598d8a93,['conda'],,https://github.com/jethro33/napari-live-recording,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-live-recording,http://api.anaconda.org/packages/conda-forge/napari-live-recording,http://anaconda.org/conda-forge/napari-live-recording,"['0.1.7', '0.2.1', '0.3.2', '0.3.3', '0.3.4', '0.3.6']",0.3.6,0.3.6,['noarch'],17.0,https://github.com/jacopoabramo/napari-live-recording,"['pyh9208f05_0', 'pyh9208f05_1', 'pyhd8ed1ab_0']",0.1.7,conda-forge/napari-live-recording/0.1.7,1.0,0.0,2022-02-02 12:44:10.409000+00:00,2024-03-16 15:46:46.357000+00:00,conda,noarch/napari-live-recording-0.1.7-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['dask-image', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'opencv', 'pyqt', 'python >=3.6,<3.10']",noarch,1643805679832.0,None-any-None,pyhd8ed1ab_0,2022-02-02 12:44:11.246000+00:00,b857d629e02cfa276fe2254ed720913d,None,16737.0,conda-forge/napari-live-recording/0.1.7/noarch/napari-live-recording-0.1.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-live-recording/0.1.7/noarch/napari-live-recording-0.1.7-pyhd8ed1ab_0.tar.bz2,conda,0.1.7,conda-forge,['main'],public,,0.1.0,napari-live-recording.open,Live recording,napari_live_recording:NapariLiveRecording,,,,2.1,napari-live-recording,0.3.8,,A napari plugin for live video recording with a generic camera device.,"# napari-live-recording +",text/markdown,,Kevin Tan,kktangent@gmail.com,GPL-3.0-only,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['dataclasses-json', 'flimlib', 'magicgui', 'matplotlib', 'numpy', 'qtpy', 'scipy', 'superqt', 'vispy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-live-flim.open,FLIM Viewer,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +227,napari-live-recording,0.3.8,napari-live-recording,A napari plugin for live video recording with a generic camera device.,"""Jacopo Abramo, Pia Pritzke, Felix Wanitschke""",MIT,https://github.com/jethro33/napari-live-recording,61fa7c9d39552dcb598d8a93,['conda'],,https://github.com/jethro33/napari-live-recording,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-live-recording,http://api.anaconda.org/packages/conda-forge/napari-live-recording,http://anaconda.org/conda-forge/napari-live-recording,"['0.1.7', '0.2.1', '0.3.2', '0.3.3', '0.3.4', '0.3.6']",0.3.6,0.3.6,['noarch'],17.0,https://github.com/jacopoabramo/napari-live-recording,"['pyh9208f05_0', 'pyh9208f05_1', 'pyhd8ed1ab_0']",0.1.7,conda-forge/napari-live-recording/0.1.7,1.0,0.0,2022-02-02 12:44:10.409000+00:00,2024-03-16 15:46:46.357000+00:00,conda,noarch/napari-live-recording-0.1.7-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['dask-image', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'opencv', 'pyqt', 'python >=3.6,<3.10']",noarch,1643805679832.0,None-any-None,pyhd8ed1ab_0,2022-02-02 12:44:11.246000+00:00,b857d629e02cfa276fe2254ed720913d,None,16737.0,conda-forge/napari-live-recording/0.1.7/noarch/napari-live-recording-0.1.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-live-recording/0.1.7/noarch/napari-live-recording-0.1.7-pyhd8ed1ab_0.tar.bz2,conda,0.1.7,conda-forge,['main'],public,,0.1.0,napari-live-recording.open,Live recording,napari_live_recording:NapariLiveRecording,,,,2.1,napari-live-recording,0.3.8,,A napari plugin for live video recording with a generic camera device.,"# napari-live-recording [![License: MIT](https://img.shields.io/badge/License-MIT-green.svg)](https://github.com/jacopoabramo/napari-live-recording/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-live-recording.svg?color=green)](https://pypi.org/project/napari-live-recording) @@ -22857,8 +23933,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/jethro33/napari-live-recording,"""Jacopo Abramo, Pia Pritzke, Felix Wanitschke""",jacopo.abramo@gmail.com,MIT,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Intended Audience :: Science/Research', 'Intended Audience :: Education', 'Framework :: napari', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Visualization']","['superqt', 'numpy', 'opencv-python', 'tifffile', 'napari[all]', 'qtpy', 'microscope >=0.7.0', 'pims', 'pyqtgraph', 'pymmcore-plus >=0.6.7', 'pymmcore-widgets', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.9,"['Bug Tracker, https://github.com/jacopoabramo/napari-live-recording/issues', 'Documentation, https://github.com/jacopoabramo/napari-live-recording#README.md', 'Source Code, https://github.com/jacopoabramo/napari-live-recording', 'User Support, https://github.com/jacopoabramo/napari-live-recording/issues']",['testing'],False,0.2.1,conda-forge/napari-live-recording/0.2.1,0.3.2,conda-forge/napari-live-recording/0.3.2,0.3.3,conda-forge/napari-live-recording/0.3.3,conda,noarch/napari-live-recording-0.2.1-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['dask-image', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'opencv', 'python >=3.6,<3.10', 'qtpy', 'superqt']",pyhd8ed1ab_0,1663622001448.0,None-any-None,noarch,2022-09-19 21:15:55.652000+00:00,d27ff54a7261aec444a83166cdba595c,None,20564.0,conda-forge/napari-live-recording/0.2.1/noarch/napari-live-recording-0.2.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-live-recording/0.2.1/noarch/napari-live-recording-0.2.1-pyhd8ed1ab_0.tar.bz2,conda,0.2.1,conda-forge,['main'],conda,noarch/napari-live-recording-0.3.2-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['napari', 'numpy', 'opencv', 'pymmcore-plus >=0.6.7', 'pymmcore-widgets', 'python >=3.6,<3.10', 'qtpy', 'superqt', 'tifffile']",noarch,1691062851420.0,None-any-None,pyhd8ed1ab_0,2023-08-03 11:43:47.644000+00:00,a209ad5eee6ef1f6a7997a4fcea49229,3e1e6a811224b26ce95ecdbdbdc23822fd1b97f04dae22fa7265cfd4823e695d,23412.0,conda-forge/napari-live-recording/0.3.2/noarch/napari-live-recording-0.3.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-live-recording/0.3.2/noarch/napari-live-recording-0.3.2-pyhd8ed1ab_0.conda,conda,0.3.2,conda-forge,['main'],conda,noarch/napari-live-recording-0.3.3-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['microscope', 'napari', 'numpy', 'opencv', 'pymmcore-plus >=0.6.7', 'pymmcore-widgets', 'python >=3.6,<3.10', 'qtpy', 'superqt', 'tifffile']",MIT,python,1699330788605.0,2023-11-07 04:21:41.402000+00:00,106f1d37df0529e51368c83241c515c4,b5ced64a4076ce65e93d9a2aba8d0f4d5dc7d30f8fa0551e22241c63c310aab1,27438.0,conda-forge/napari-live-recording/0.3.3/noarch/napari-live-recording-0.3.3-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-live-recording/0.3.3/noarch/napari-live-recording-0.3.3-pyh9208f05_0.conda,conda,0.3.3,conda-forge,['main'],,,,,,,,,,,napari-live-recording.open,Live recording,False,,,,,,,,,,,,,,,,,,,,,,,0.3.4,conda-forge/napari-live-recording/0.3.4,0.3.6,conda-forge/napari-live-recording/0.3.6,,,conda,noarch/napari-live-recording-0.3.4-pyh9208f05_0.conda,0.0,MIT,False,python,"['microscope', 'napari', 'numpy', 'opencv', 'pymmcore-plus >=0.6.7', 'pymmcore-widgets', 'python >=3.6,<3.10', 'qtpy', 'superqt', 'tifffile']",noarch,1710429274390.0,None-any-None,pyh9208f05_0,2024-03-14 15:16:26.283000+00:00,cef4df4f743e5d5bfe0f92f5d2e2f9cb,635669623ee644032b1ea6494d553a16a0c3a0138bbae9cab247ebdc1a3bff3c,28033.0,conda-forge/napari-live-recording/0.3.4/noarch/napari-live-recording-0.3.4-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-live-recording/0.3.4/noarch/napari-live-recording-0.3.4-pyh9208f05_0.conda,conda,0.3.4,conda-forge,['main'],conda,noarch/napari-live-recording-0.3.6-pyh9208f05_1.conda,1.0,MIT,False,python,"['microscope', 'napari', 'numpy', 'opencv', 'pims', 'pymmcore-plus >=0.6.7', 'pymmcore-widgets', 'pyqtgraph', 'python >=3.9,<3.12', 'qtpy', 'superqt', 'tifffile']",noarch,1710603894792.0,None-any-None,pyh9208f05_1,2024-03-16 15:46:43.092000+00:00,211fed323f6bcb898ce560f39376b089,567eab6549f7be861acafaad95cc8e578924a53e8769a3cdc0b2413c1ad64c74,595716.0,conda-forge/napari-live-recording/0.3.6/noarch/napari-live-recording-0.3.6-pyh9208f05_1.conda,//api.anaconda.org/download/conda-forge/napari-live-recording/0.3.6/noarch/napari-live-recording-0.3.6-pyh9208f05_1.conda,conda,0.3.6,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -217,napari-locan,0.5.0,napari-locan,Use locan methods in napari for single-molecule localization microscopy data.,napari-locan Developers,"BSD 3-Clause License +",text/markdown,https://github.com/jethro33/napari-live-recording,"""Jacopo Abramo, Pia Pritzke, Felix Wanitschke""",jacopo.abramo@gmail.com,MIT,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Intended Audience :: Science/Research', 'Intended Audience :: Education', 'Framework :: napari', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Visualization']","['superqt', 'numpy', 'opencv-python', 'tifffile', 'napari[all]', 'qtpy', 'microscope >=0.7.0', 'pims', 'pyqtgraph', 'pymmcore-plus >=0.6.7', 'pymmcore-widgets', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.9,"['Bug Tracker, https://github.com/jacopoabramo/napari-live-recording/issues', 'Documentation, https://github.com/jacopoabramo/napari-live-recording#README.md', 'Source Code, https://github.com/jacopoabramo/napari-live-recording', 'User Support, https://github.com/jacopoabramo/napari-live-recording/issues']",['testing'],False,0.2.1,conda-forge/napari-live-recording/0.2.1,0.3.2,conda-forge/napari-live-recording/0.3.2,0.3.3,conda-forge/napari-live-recording/0.3.3,conda,noarch/napari-live-recording-0.2.1-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['dask-image', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'opencv', 'python >=3.6,<3.10', 'qtpy', 'superqt']",pyhd8ed1ab_0,1663622001448.0,None-any-None,noarch,2022-09-19 21:15:55.652000+00:00,d27ff54a7261aec444a83166cdba595c,None,20564.0,conda-forge/napari-live-recording/0.2.1/noarch/napari-live-recording-0.2.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-live-recording/0.2.1/noarch/napari-live-recording-0.2.1-pyhd8ed1ab_0.tar.bz2,conda,0.2.1,conda-forge,['main'],conda,noarch/napari-live-recording-0.3.2-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['napari', 'numpy', 'opencv', 'pymmcore-plus >=0.6.7', 'pymmcore-widgets', 'python >=3.6,<3.10', 'qtpy', 'superqt', 'tifffile']",noarch,1691062851420.0,None-any-None,pyhd8ed1ab_0,2023-08-03 11:43:47.644000+00:00,a209ad5eee6ef1f6a7997a4fcea49229,3e1e6a811224b26ce95ecdbdbdc23822fd1b97f04dae22fa7265cfd4823e695d,23412.0,conda-forge/napari-live-recording/0.3.2/noarch/napari-live-recording-0.3.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-live-recording/0.3.2/noarch/napari-live-recording-0.3.2-pyhd8ed1ab_0.conda,conda,0.3.2,conda-forge,['main'],conda,noarch/napari-live-recording-0.3.3-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['microscope', 'napari', 'numpy', 'opencv', 'pymmcore-plus >=0.6.7', 'pymmcore-widgets', 'python >=3.6,<3.10', 'qtpy', 'superqt', 'tifffile']",MIT,python,1699330788605.0,2023-11-07 04:21:41.402000+00:00,106f1d37df0529e51368c83241c515c4,b5ced64a4076ce65e93d9a2aba8d0f4d5dc7d30f8fa0551e22241c63c310aab1,27438.0,conda-forge/napari-live-recording/0.3.3/noarch/napari-live-recording-0.3.3-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-live-recording/0.3.3/noarch/napari-live-recording-0.3.3-pyh9208f05_0.conda,conda,0.3.3,conda-forge,['main'],,,,,,,,,,,napari-live-recording.open,Live recording,False,,,,,,,,,,,,,,,,,,,,,,,0.3.4,conda-forge/napari-live-recording/0.3.4,0.3.6,conda-forge/napari-live-recording/0.3.6,,,conda,noarch/napari-live-recording-0.3.4-pyh9208f05_0.conda,0.0,MIT,False,python,"['microscope', 'napari', 'numpy', 'opencv', 'pymmcore-plus >=0.6.7', 'pymmcore-widgets', 'python >=3.6,<3.10', 'qtpy', 'superqt', 'tifffile']",noarch,1710429274390.0,None-any-None,pyh9208f05_0,2024-03-14 15:16:26.283000+00:00,cef4df4f743e5d5bfe0f92f5d2e2f9cb,635669623ee644032b1ea6494d553a16a0c3a0138bbae9cab247ebdc1a3bff3c,28033.0,conda-forge/napari-live-recording/0.3.4/noarch/napari-live-recording-0.3.4-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-live-recording/0.3.4/noarch/napari-live-recording-0.3.4-pyh9208f05_0.conda,conda,0.3.4,conda-forge,['main'],conda,noarch/napari-live-recording-0.3.6-pyh9208f05_1.conda,1.0,MIT,False,python,"['microscope', 'napari', 'numpy', 'opencv', 'pims', 'pymmcore-plus >=0.6.7', 'pymmcore-widgets', 'pyqtgraph', 'python >=3.9,<3.12', 'qtpy', 'superqt', 'tifffile']",noarch,1710603894792.0,None-any-None,pyh9208f05_1,2024-03-16 15:46:43.092000+00:00,211fed323f6bcb898ce560f39376b089,567eab6549f7be861acafaad95cc8e578924a53e8769a3cdc0b2413c1ad64c74,595716.0,conda-forge/napari-live-recording/0.3.6/noarch/napari-live-recording-0.3.6-pyh9208f05_1.conda,//api.anaconda.org/download/conda-forge/napari-live-recording/0.3.6/noarch/napari-live-recording-0.3.6-pyh9208f05_1.conda,conda,0.3.6,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +228,napari-locan,0.5.0,napari-locan,Use locan methods in napari for single-molecule localization microscopy data.,napari-locan Developers,"BSD 3-Clause License Copyright (c) 2022-23, Biotechnologie und Biophysik - Universität Würzburg All rights reserved. @@ -23002,8 +24078,8 @@ SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. -","['Development Status :: 3 - Alpha', 'Environment :: X11 Applications :: Qt', 'Framework :: napari', 'Intended Audience :: Education', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: BSD License', 'Operating System :: MacOS', 'Operating System :: Microsoft :: Windows', 'Operating System :: POSIX', 'Operating System :: Unix', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Topic :: Scientific/Engineering :: Visualization']","['locan >=0.18', 'matplotlib', 'napari', 'napari-matplotlib', 'numpy', 'qtpy', ""black ; extra == 'dev'"", ""build ; extra == 'dev'"", ""coverage[toml] ; extra == 'dev'"", ""mypy ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""ruff ; extra == 'dev'"", ""twine ; extra == 'dev'"", ""furo ; extra == 'docs'"", ""ipython ; extra == 'docs'"", ""myst-nb ; extra == 'docs'"", ""napari >=0.4.17 ; extra == 'docs'"", ""sphinx ; extra == 'docs'"", ""sphinx-autodoc-typehints ; extra == 'docs'"", ""sphinx-copybutton ; extra == 'docs'"", ""pytest ; extra == 'test'"", ""pytest-qt ; extra == 'test'""]",>=3.9,"['homepage, https://github.com/super-resolution/napari-locan', 'documentation, https://napari-locan.readthedocs.io/', 'issues, https://github.com/super-resolution/napari-locan/issues', 'discussions, https://github.com/super-resolution/napari-locan/discussions', 'changelog, https://github.com/super-resolution/napari-locan/CHANGES.rst', 'Source Code, https://github.com/super-resolution/napari-locan', 'Bug Tracker, https://github.com/super-resolution/napari-locan/issues', 'User Support, https://github.com/super-resolution/napari-locan/discussions']","['dev', 'docs', 'test']",False,0.4.0,conda-forge/napari-locan/0.4.0,0.5.0,conda-forge/napari-locan/0.5.0,,,conda,noarch/napari-locan-0.4.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['locan >=0.17', 'matplotlib-base <3.8.0', 'napari', 'napari-matplotlib', 'numpy', 'python >=3.9', 'qtpy']",pyhd8ed1ab_0,1699689031607.0,None-any-None,noarch,2023-11-11 07:52:59.173000+00:00,fe75ad8bf682c52a35f31ac1feee0850,0f6534a1b62c393792e770013cf0d3fb225bf05277157ee6c26e765109be9a44,45809.0,conda-forge/napari-locan/0.4.0/noarch/napari-locan-0.4.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-locan/0.4.0/noarch/napari-locan-0.4.0-pyhd8ed1ab_0.conda,conda,0.4.0,conda-forge,['main'],conda,noarch/napari-locan-0.5.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['locan >=0.17', 'matplotlib-base <3.8.0', 'napari', 'napari-matplotlib', 'numpy', 'python >=3.9', 'qtpy']",noarch,1702068406565.0,None-any-None,pyhd8ed1ab_0,2023-12-08 20:48:46.570000+00:00,5a876e23f7633ab358affb0f02b3a055,0bdddfef682494f8e13c1fd89c49f25bd4aaaf6754f3ca7ba3b1e5eeefd648c4,44324.0,conda-forge/napari-locan/0.5.0/noarch/napari-locan-0.5.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-locan/0.5.0/noarch/napari-locan-0.5.0-pyhd8ed1ab_0.conda,conda,0.5.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,napari-locan.make_image_tubulin,Load sample data from napari-locan (tubulin img),napari_locan.sample_data.sample_data:make_image_tubulin,napari-locan.make_points_npc,Load sample data from napari-locan (npc localizations),napari_locan.sample_data.sample_data:make_points_npc,napari-locan.make_points_tubulin,Load sample data from napari-locan (tubulin localizations),napari_locan.sample_data.sample_data:make_points_tubulin,napari-locan.smlm_data_qwidget,SMLM data,False,napari-locan.show_metadata_qwidget,Show metadata,False,napari-locan.show_properties_qwidget,Show properties,False,napari-locan.show_data_qwidget,Show data statistics,False,napari-locan.smlm_data_qwidget,SMLM data,napari_locan.widgets.widget_smlm_data:SmlmDataQWidget,,,,,,,,napari-locan.make_image_npc,npc_image,Nuclear Pore Complex (2D),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-locan.make_image_tubulin,tubulin_image,Tubulin (2D),napari-locan.show_metadata_qwidget,Show metadata,napari_locan.widgets.widget_show_metadata:ShowMetadataQWidget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-locan.show_properties_qwidget,Show properties,napari_locan.widgets.widget_show_properties:ShowPropertiesQWidget,napari-locan.show_data_qwidget,Show data statistics,napari_locan.widgets.widget_show_data:ShowDataQWidget,napari-locan.property_distribution_qwidget,Show property distribution,napari_locan.widgets.widget_property_distribution:PropertyDistributionQWidget,napari-locan.load_qwidget,Load,napari_locan.widgets.widget_load:LoadQWidget,napari-locan.filter_specifications_qwidget,Filter specifications,napari_locan.widgets.widget_filter_specifications:FilterSpecificationsQWidget,napari-locan.select_qwidget,Select,napari_locan.widgets.widget_select:SelectQWidget,,napari-locan.property_distribution_qwidget,Show property distribution,False,napari-locan.load_qwidget,Load,False,napari-locan.filter_specifications_qwidget,Filter specifications,False,napari-locan.select_qwidget,Select,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-locan.make_points_npc,npc_points,Nuclear Pore Complex (2D-point cloud) -218,napari-locpix,0.0.6,napari-locpix,Load in SMLM data and annotate within napari,Oliver Umney,MIT,https://github.com/oubino/napari-locpix,6425cafbfa873ab69a36d91b,['conda'],,https://github.com/oubino/napari-locpix,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-locpix,http://api.anaconda.org/packages/conda-forge/napari-locpix,http://anaconda.org/conda-forge/napari-locpix,"['0.0.1', '0.0.3']",0.0.3,0.0.3,['noarch'],4.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-locpix/0.0.1,1.0,0.0,2023-03-30 17:46:32.520000+00:00,2023-06-18 17:27:55.995000+00:00,conda,noarch/napari-locpix-0.0.1-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['napari', 'numpy', 'polars', 'pyarrow', 'python >=3.8', 'qtpy']",noarch,1680198259015.0,None-any-None,pyhd8ed1ab_0,2023-03-30 17:46:32.853000+00:00,ee64382f8bdccb20546c4516a502f930,2d7edebf719b5bf434121d46bda66f012f7b7c16011876e2210a4b63586f85e0,20838.0,conda-forge/napari-locpix/0.0.1/noarch/napari-locpix-0.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-locpix/0.0.1/noarch/napari-locpix-0.0.1-pyhd8ed1ab_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-locpix.make_sample_data,Load sample data from napari-locpix,napari_locpix._sample_data:make_sample_data,,,,2.1,napari-locpix,0.0.6,,Load in SMLM data and annotate within napari,"# napari-locpix +","['Development Status :: 3 - Alpha', 'Environment :: X11 Applications :: Qt', 'Framework :: napari', 'Intended Audience :: Education', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: BSD License', 'Operating System :: MacOS', 'Operating System :: Microsoft :: Windows', 'Operating System :: POSIX', 'Operating System :: Unix', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Topic :: Scientific/Engineering :: Visualization']","['locan >=0.18', 'matplotlib', 'napari', 'napari-matplotlib', 'numpy', 'qtpy', ""black ; extra == 'dev'"", ""build ; extra == 'dev'"", ""coverage[toml] ; extra == 'dev'"", ""mypy ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""ruff ; extra == 'dev'"", ""twine ; extra == 'dev'"", ""furo ; extra == 'docs'"", ""ipython ; extra == 'docs'"", ""myst-nb ; extra == 'docs'"", ""napari >=0.4.17 ; extra == 'docs'"", ""sphinx ; extra == 'docs'"", ""sphinx-autodoc-typehints ; extra == 'docs'"", ""sphinx-copybutton ; extra == 'docs'"", ""pytest ; extra == 'test'"", ""pytest-qt ; extra == 'test'""]",>=3.9,"['homepage, https://github.com/super-resolution/napari-locan', 'documentation, https://napari-locan.readthedocs.io/', 'issues, https://github.com/super-resolution/napari-locan/issues', 'discussions, https://github.com/super-resolution/napari-locan/discussions', 'changelog, https://github.com/super-resolution/napari-locan/CHANGES.rst', 'Source Code, https://github.com/super-resolution/napari-locan', 'Bug Tracker, https://github.com/super-resolution/napari-locan/issues', 'User Support, https://github.com/super-resolution/napari-locan/discussions']","['dev', 'docs', 'test']",False,0.4.0,conda-forge/napari-locan/0.4.0,0.5.0,conda-forge/napari-locan/0.5.0,,,conda,noarch/napari-locan-0.4.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['locan >=0.17', 'matplotlib-base <3.8.0', 'napari', 'napari-matplotlib', 'numpy', 'python >=3.9', 'qtpy']",pyhd8ed1ab_0,1699689031607.0,None-any-None,noarch,2023-11-11 07:52:59.173000+00:00,fe75ad8bf682c52a35f31ac1feee0850,0f6534a1b62c393792e770013cf0d3fb225bf05277157ee6c26e765109be9a44,45809.0,conda-forge/napari-locan/0.4.0/noarch/napari-locan-0.4.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-locan/0.4.0/noarch/napari-locan-0.4.0-pyhd8ed1ab_0.conda,conda,0.4.0,conda-forge,['main'],conda,noarch/napari-locan-0.5.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['locan >=0.17', 'matplotlib-base <3.8.0', 'napari', 'napari-matplotlib', 'numpy', 'python >=3.9', 'qtpy']",noarch,1702068406565.0,None-any-None,pyhd8ed1ab_0,2023-12-08 20:48:46.570000+00:00,5a876e23f7633ab358affb0f02b3a055,0bdddfef682494f8e13c1fd89c49f25bd4aaaf6754f3ca7ba3b1e5eeefd648c4,44324.0,conda-forge/napari-locan/0.5.0/noarch/napari-locan-0.5.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-locan/0.5.0/noarch/napari-locan-0.5.0-pyhd8ed1ab_0.conda,conda,0.5.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,napari-locan.make_image_tubulin,Load sample data from napari-locan (tubulin img),napari_locan.sample_data.sample_data:make_image_tubulin,napari-locan.make_points_npc,Load sample data from napari-locan (npc localizations),napari_locan.sample_data.sample_data:make_points_npc,napari-locan.make_points_tubulin,Load sample data from napari-locan (tubulin localizations),napari_locan.sample_data.sample_data:make_points_tubulin,napari-locan.smlm_data_qwidget,SMLM data,False,napari-locan.show_metadata_qwidget,Show metadata,False,napari-locan.show_properties_qwidget,Show properties,False,napari-locan.show_data_qwidget,Show data statistics,False,napari-locan.smlm_data_qwidget,SMLM data,napari_locan.widgets.widget_smlm_data:SmlmDataQWidget,,,,,,,,napari-locan.make_image_npc,npc_image,Nuclear Pore Complex (2D),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-locan.make_image_tubulin,tubulin_image,Tubulin (2D),napari-locan.show_metadata_qwidget,Show metadata,napari_locan.widgets.widget_show_metadata:ShowMetadataQWidget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-locan.show_properties_qwidget,Show properties,napari_locan.widgets.widget_show_properties:ShowPropertiesQWidget,napari-locan.show_data_qwidget,Show data statistics,napari_locan.widgets.widget_show_data:ShowDataQWidget,napari-locan.property_distribution_qwidget,Show property distribution,napari_locan.widgets.widget_property_distribution:PropertyDistributionQWidget,napari-locan.load_qwidget,Load,napari_locan.widgets.widget_load:LoadQWidget,napari-locan.filter_specifications_qwidget,Filter specifications,napari_locan.widgets.widget_filter_specifications:FilterSpecificationsQWidget,,napari-locan.property_distribution_qwidget,Show property distribution,False,napari-locan.load_qwidget,Load,False,napari-locan.filter_specifications_qwidget,Filter specifications,False,napari-locan.select_qwidget,Select,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-locan.make_points_npc,npc_points,Nuclear Pore Complex (2D-point cloud) +229,napari-locpix,0.0.6,napari-locpix,Load in SMLM data and annotate within napari,Oliver Umney,MIT,https://github.com/oubino/napari-locpix,6425cafbfa873ab69a36d91b,['conda'],,https://github.com/oubino/napari-locpix,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-locpix,http://api.anaconda.org/packages/conda-forge/napari-locpix,http://anaconda.org/conda-forge/napari-locpix,"['0.0.1', '0.0.3']",0.0.3,0.0.3,['noarch'],4.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-locpix/0.0.1,1.0,0.0,2023-03-30 17:46:32.520000+00:00,2023-06-18 17:27:55.995000+00:00,conda,noarch/napari-locpix-0.0.1-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['napari', 'numpy', 'polars', 'pyarrow', 'python >=3.8', 'qtpy']",noarch,1680198259015.0,None-any-None,pyhd8ed1ab_0,2023-03-30 17:46:32.853000+00:00,ee64382f8bdccb20546c4516a502f930,2d7edebf719b5bf434121d46bda66f012f7b7c16011876e2210a4b63586f85e0,20838.0,conda-forge/napari-locpix/0.0.1/noarch/napari-locpix-0.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-locpix/0.0.1/noarch/napari-locpix-0.0.1-pyhd8ed1ab_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-locpix.make_sample_data,Load sample data from napari-locpix,napari_locpix._sample_data:make_sample_data,,,,2.1,napari-locpix,0.0.6,,Load in SMLM data and annotate within napari,"# napari-locpix [![License MIT](https://img.shields.io/pypi/l/napari-locpix.svg?color=green)](https://github.com/oubino/napari-locpix/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-locpix.svg?color=green)](https://pypi.org/project/napari-locpix) @@ -23116,8 +24192,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/oubino/napari-locpix,Oliver Umney,scou@leeds.ac.uk,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'qtpy', 'polars', 'pyarrow', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/oubino/napari-locpix/issues', 'Documentation, https://github.com/oubino/napari-locpix#README.md', 'Source Code, https://github.com/oubino/napari-locpix', 'User Support, https://github.com/oubino/napari-locpix/issues']",['testing'],False,0.0.3,conda-forge/napari-locpix/0.0.3,,,,,conda,noarch/napari-locpix-0.0.3-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['napari', 'numpy', 'polars', 'pyarrow', 'python >=3.8', 'qtpy']",pyhd8ed1ab_0,1680283093040.0,None-any-None,noarch,2023-03-31 17:20:48.929000+00:00,7fe5bbd0bda755d6c2e0596a2e3e0266,301323991e55eb908013931b94a682a42139539cc3e7855ccb149992d5fb845c,20950.0,conda-forge/napari-locpix/0.0.3/noarch/napari-locpix-0.0.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-locpix/0.0.3/noarch/napari-locpix-0.0.3-pyhd8ed1ab_0.conda,conda,0.0.3,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-locpix.widget,Annotate,napari_locpix._widget:DatastrucWidget,,,,,,,napari-locpix.widget,Annotate,False,,,,,,,,,,,,,,,,,,,,napari-locpix.make_sample_data,unique_id.1,napari-locpix,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -219,napari-macrokit,0.0.1,napari macro-kit,Executable script generation for napari plugins,Hanjin Liu,BSD-3-Clause,https://github.com/hanjinliu/napari-macrokit,6425b87470b81c2888be6fbb,['conda'],,https://github.com/hanjinliu/napari-macrokit,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-macrokit,http://api.anaconda.org/packages/conda-forge/napari-macrokit,http://anaconda.org/conda-forge/napari-macrokit,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-macrokit/0.0.1,1.0,0.0,2023-03-30 16:27:30.489000+00:00,2023-06-18 17:27:55.879000+00:00,conda,noarch/napari-macrokit-0.0.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['macro-kit >=0.4.0', 'magicgui', 'napari', 'numpy', 'pandas', 'python >=3.8', 'qtpy']",noarch,1680193492817.0,None-any-None,pyhd8ed1ab_0,2023-03-30 16:27:30.814000+00:00,9fb0945c6b7ff0bcd37aa8722bb0e0ed,9a0077630a36ebdd8186fc94a2ad65c4227c28802054821e2f3bc4e4557c4909,26706.0,conda-forge/napari-macrokit/0.0.1/noarch/napari-macrokit-0.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-macrokit/0.0.1/noarch/napari-macrokit-0.0.1-pyhd8ed1ab_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-macrokit.make_qwidget,View macro scripts,napari_macrokit:QMacroView,,,,2.1,napari-macrokit,0.0.1,,Executable script generation for napari plugins,"# napari-macrokit +",text/markdown,https://github.com/oubino/napari-locpix,Oliver Umney,scou@leeds.ac.uk,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'qtpy', 'polars', 'pyarrow', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/oubino/napari-locpix/issues', 'Documentation, https://github.com/oubino/napari-locpix#README.md', 'Source Code, https://github.com/oubino/napari-locpix', 'User Support, https://github.com/oubino/napari-locpix/issues']",['testing'],False,0.0.3,conda-forge/napari-locpix/0.0.3,,,,,conda,noarch/napari-locpix-0.0.3-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['napari', 'numpy', 'polars', 'pyarrow', 'python >=3.8', 'qtpy']",pyhd8ed1ab_0,1680283093040.0,None-any-None,noarch,2023-03-31 17:20:48.929000+00:00,7fe5bbd0bda755d6c2e0596a2e3e0266,301323991e55eb908013931b94a682a42139539cc3e7855ccb149992d5fb845c,20950.0,conda-forge/napari-locpix/0.0.3/noarch/napari-locpix-0.0.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-locpix/0.0.3/noarch/napari-locpix-0.0.3-pyhd8ed1ab_0.conda,conda,0.0.3,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-locpix.widget,Annotate,napari_locpix._widget:DatastrucWidget,,,,,,,napari-locpix.widget,Annotate,False,,,,,,,,,,,,,,,,,,,,napari-locpix.make_sample_data,unique_id.1,napari-locpix,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +230,napari-macrokit,0.0.1,napari macro-kit,Executable script generation for napari plugins,Hanjin Liu,BSD-3-Clause,https://github.com/hanjinliu/napari-macrokit,6425b87470b81c2888be6fbb,['conda'],,https://github.com/hanjinliu/napari-macrokit,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-macrokit,http://api.anaconda.org/packages/conda-forge/napari-macrokit,http://anaconda.org/conda-forge/napari-macrokit,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-macrokit/0.0.1,1.0,0.0,2023-03-30 16:27:30.489000+00:00,2023-06-18 17:27:55.879000+00:00,conda,noarch/napari-macrokit-0.0.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['macro-kit >=0.4.0', 'magicgui', 'napari', 'numpy', 'pandas', 'python >=3.8', 'qtpy']",noarch,1680193492817.0,None-any-None,pyhd8ed1ab_0,2023-03-30 16:27:30.814000+00:00,9fb0945c6b7ff0bcd37aa8722bb0e0ed,9a0077630a36ebdd8186fc94a2ad65c4227c28802054821e2f3bc4e4557c4909,26706.0,conda-forge/napari-macrokit/0.0.1/noarch/napari-macrokit-0.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-macrokit/0.0.1/noarch/napari-macrokit-0.0.1-pyhd8ed1ab_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-macrokit.make_qwidget,View macro scripts,napari_macrokit:QMacroView,,,,2.1,napari-macrokit,0.0.1,,Executable script generation for napari plugins,"# napari-macrokit [![License BSD-3](https://img.shields.io/pypi/l/napari-macrokit.svg?color=green)](https://github.com/hanjinliu/napari-macrokit/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-macrokit.svg?color=green)](https://pypi.org/project/napari-macrokit) @@ -23301,8 +24377,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/hanjinliu/napari-macrokit,Hanjin Liu,liuhanjin-sc@g.ecc.u-tokyo.ac.jp,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'macro-kit (>=0.4.0)', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/hanjinliu/napari-macrokit/issues', 'Documentation, https://github.com/hanjinliu/napari-macrokit#README.md', 'Source Code, https://github.com/hanjinliu/napari-macrokit', 'User Support, https://github.com/hanjinliu/napari-macrokit/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-macrokit.make_qwidget,napari-macrokit,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -220,napari-manual-registration,0.0.2,Manual registration,A simple plugin to register 2 views of the same object,"Alice Gros, Jules Vanaret",BSD-3-Clause,https://github.com/jules-vanaret/napari-manual-registration,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-manual-registration.run_registration,Run manual registration,napari_manual_registration:RegistrationWidget,,,,2.1,napari-manual-registration,0.0.2,,A simple plugin to register 2 views of the same object,"# :herb: napari-manual-registration +",text/markdown,https://github.com/hanjinliu/napari-macrokit,Hanjin Liu,liuhanjin-sc@g.ecc.u-tokyo.ac.jp,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'macro-kit (>=0.4.0)', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/hanjinliu/napari-macrokit/issues', 'Documentation, https://github.com/hanjinliu/napari-macrokit#README.md', 'Source Code, https://github.com/hanjinliu/napari-macrokit', 'User Support, https://github.com/hanjinliu/napari-macrokit/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-macrokit.make_qwidget,napari-macrokit,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +231,napari-manual-registration,0.0.2,Manual registration,A simple plugin to register 2 views of the same object,"Alice Gros, Jules Vanaret",BSD-3-Clause,https://github.com/jules-vanaret/napari-manual-registration,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-manual-registration.run_registration,Run manual registration,napari_manual_registration:RegistrationWidget,,,,2.1,napari-manual-registration,0.0.2,,A simple plugin to register 2 views of the same object,"# :herb: napari-manual-registration [![License BSD-3](https://img.shields.io/pypi/l/napari-manual-registration.svg?color=green)](https://github.com/jules-vanaret/napari-manual-registration/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-manual-registration.svg?color=green)](https://pypi.org/project/napari-manual-registration) @@ -23444,8 +24520,8 @@ This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookie [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/jules-vanaret/napari-manual-registration,"Alice Gros, Jules Vanaret",jules.vanaret@univ-amu.fr,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'scipy', 'magicgui', 'qtpy', 'pyclesperanto-prototype', 'scikit-image', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.8,"['Bug Tracker, https://github.com/jules-vanaret/napari-manual-registration/issues', 'Documentation, https://github.com/jules-vanaret/napari-manual-registration#README.md', 'Source Code, https://github.com/jules-vanaret/napari-manual-registration', 'User Support, https://github.com/jules-vanaret/napari-manual-registration/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-manual-registration.run_registration,Manual registration,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -221,napari-manual-transforms,0.0.3,Manual Transforms,Interface to manually edit layer affine transforms,Talley Lambert,BSD-3-Clause,https://github.com/tlambert03/napari-manual-transforms,62cbe64ce8e8f33544fb8da1,['conda'],,https://github.com/tlambert03/napari-manual-transforms,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-manual-transforms,http://api.anaconda.org/packages/conda-forge/napari-manual-transforms,http://anaconda.org/conda-forge/napari-manual-transforms,['0.0.3'],0.0.3,0.0.3,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.3,conda-forge/napari-manual-transforms/0.0.3,1.0,0.0,2022-07-11 08:58:50.262000+00:00,2023-06-18 08:42:03.349000+00:00,conda,noarch/napari-manual-transforms-0.0.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'pytransform3d', 'qtpy', 'scipy', 'vispy']",noarch,1657529803910.0,None-any-None,pyhd8ed1ab_0,2022-07-11 08:58:50.624000+00:00,eb8a2c8c3f1f1cc44e99cff5bc50aa85,None,14352.0,conda-forge/napari-manual-transforms/0.0.3/noarch/napari-manual-transforms-0.0.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-manual-transforms/0.0.3/noarch/napari-manual-transforms-0.0.3-pyhd8ed1ab_0.tar.bz2,conda,0.0.3,conda-forge,['main'],public,,0.2.1,napari-manual-transforms.make_rotation_helper,Make Rotation Helper,napari_manual_transforms:RotationWidget,,,,2.1,napari-manual-transforms,0.0.3,['UNKNOWN'],Interface to manually edit layer affine transforms,"# napari-manual-transforms +",text/markdown,https://github.com/jules-vanaret/napari-manual-registration,"Alice Gros, Jules Vanaret",jules.vanaret@univ-amu.fr,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'scipy', 'magicgui', 'qtpy', 'pyclesperanto-prototype', 'scikit-image', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.8,"['Bug Tracker, https://github.com/jules-vanaret/napari-manual-registration/issues', 'Documentation, https://github.com/jules-vanaret/napari-manual-registration#README.md', 'Source Code, https://github.com/jules-vanaret/napari-manual-registration', 'User Support, https://github.com/jules-vanaret/napari-manual-registration/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-manual-registration.run_registration,Manual registration,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +232,napari-manual-transforms,0.0.3,Manual Transforms,Interface to manually edit layer affine transforms,Talley Lambert,BSD-3-Clause,https://github.com/tlambert03/napari-manual-transforms,62cbe64ce8e8f33544fb8da1,['conda'],,https://github.com/tlambert03/napari-manual-transforms,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-manual-transforms,http://api.anaconda.org/packages/conda-forge/napari-manual-transforms,http://anaconda.org/conda-forge/napari-manual-transforms,['0.0.3'],0.0.3,0.0.3,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.3,conda-forge/napari-manual-transforms/0.0.3,1.0,0.0,2022-07-11 08:58:50.262000+00:00,2023-06-18 08:42:03.349000+00:00,conda,noarch/napari-manual-transforms-0.0.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'pytransform3d', 'qtpy', 'scipy', 'vispy']",noarch,1657529803910.0,None-any-None,pyhd8ed1ab_0,2022-07-11 08:58:50.624000+00:00,eb8a2c8c3f1f1cc44e99cff5bc50aa85,None,14352.0,conda-forge/napari-manual-transforms/0.0.3/noarch/napari-manual-transforms-0.0.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-manual-transforms/0.0.3/noarch/napari-manual-transforms-0.0.3-pyhd8ed1ab_0.tar.bz2,conda,0.0.3,conda-forge,['main'],public,,0.2.1,napari-manual-transforms.make_rotation_helper,Make Rotation Helper,napari_manual_transforms:RotationWidget,,,,2.1,napari-manual-transforms,0.0.3,['UNKNOWN'],Interface to manually edit layer affine transforms,"# napari-manual-transforms [![License](https://img.shields.io/pypi/l/napari-manual-transforms.svg?color=green)](https://github.com/tlambert03/napari-manual-transforms/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-manual-transforms.svg?color=green)](https://pypi.org/project/napari-manual-transforms) @@ -23527,8 +24603,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/tlambert03/napari-manual-transforms,Talley Lambert,talley.lambert@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['magicgui', 'napari', 'numpy', 'pytransform3d', 'qtpy', 'scipy', 'vispy', ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/tlambert03/napari-manual-transforms/issues', 'Documentation, https://github.com/tlambert03/napari-manual-transforms#README.md', 'Source Code, https://github.com/tlambert03/napari-manual-transforms', 'User Support, https://github.com/tlambert03/napari-manual-transforms/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-manual-transforms.make_rotation_helper,Rotation Helper,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -222,napari-mat-file-reader,0.0.2,napari mat file reader,This is a simple wraper to read .mat files from Matlab,Ruben Lopez,BSD-3-Clause,https://github.com/rjlopez2/napari-mat-file-reader,6435db7b75607eabfd8d1b25,['conda'],,https://github.com/rjlopez2/napari-mat-file-reader,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-mat-file-reader,http://api.anaconda.org/packages/conda-forge/napari-mat-file-reader,http://anaconda.org/conda-forge/napari-mat-file-reader,['0.0.2'],0.0.2,0.0.2,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.2,conda-forge/napari-mat-file-reader/0.0.2,1.0,0.0,2023-04-11 22:13:12.706000+00:00,2023-06-18 17:27:59.715000+00:00,conda,noarch/napari-mat-file-reader-0.0.2-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['mat73', 'numpy', 'python >=3.8']",noarch,1681251144477.0,None-any-None,pyhd8ed1ab_0,2023-04-11 22:13:13.161000+00:00,d0eb3fc3e42cf0012e73fb31b4b22510,28941b9ed1756c09d6054114cc04b61e51955abea111b5ca152da11dfac23043,12195.0,conda-forge/napari-mat-file-reader/0.0.2/noarch/napari-mat-file-reader-0.0.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-mat-file-reader/0.0.2/noarch/napari-mat-file-reader-0.0.2-pyhd8ed1ab_0.conda,conda,0.0.2,conda-forge,['main'],public,,0.2.1,napari-mat-file-reader.get_reader,Open data with napari mat file reader,napari_mat_file_reader._reader:napari_get_reader,napari-mat-file-reader.get_reader,['*.mat'],False,2.1,napari-mat-file-reader,0.0.2,,This is a simple wraper to read .mat files from Matlab,"# napari-mat-file-reader +",text/markdown,https://github.com/tlambert03/napari-manual-transforms,Talley Lambert,talley.lambert@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['magicgui', 'napari', 'numpy', 'pytransform3d', 'qtpy', 'scipy', 'vispy', ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/tlambert03/napari-manual-transforms/issues', 'Documentation, https://github.com/tlambert03/napari-manual-transforms#README.md', 'Source Code, https://github.com/tlambert03/napari-manual-transforms', 'User Support, https://github.com/tlambert03/napari-manual-transforms/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-manual-transforms.make_rotation_helper,Rotation Helper,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +233,napari-mat-file-reader,0.0.2,napari mat file reader,This is a simple wraper to read .mat files from Matlab,Ruben Lopez,BSD-3-Clause,https://github.com/rjlopez2/napari-mat-file-reader,6435db7b75607eabfd8d1b25,['conda'],,https://github.com/rjlopez2/napari-mat-file-reader,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-mat-file-reader,http://api.anaconda.org/packages/conda-forge/napari-mat-file-reader,http://anaconda.org/conda-forge/napari-mat-file-reader,['0.0.2'],0.0.2,0.0.2,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.2,conda-forge/napari-mat-file-reader/0.0.2,1.0,0.0,2023-04-11 22:13:12.706000+00:00,2023-06-18 17:27:59.715000+00:00,conda,noarch/napari-mat-file-reader-0.0.2-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['mat73', 'numpy', 'python >=3.8']",noarch,1681251144477.0,None-any-None,pyhd8ed1ab_0,2023-04-11 22:13:13.161000+00:00,d0eb3fc3e42cf0012e73fb31b4b22510,28941b9ed1756c09d6054114cc04b61e51955abea111b5ca152da11dfac23043,12195.0,conda-forge/napari-mat-file-reader/0.0.2/noarch/napari-mat-file-reader-0.0.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-mat-file-reader/0.0.2/noarch/napari-mat-file-reader-0.0.2-pyhd8ed1ab_0.conda,conda,0.0.2,conda-forge,['main'],public,,0.2.1,napari-mat-file-reader.get_reader,Open data with napari mat file reader,napari_mat_file_reader._reader:napari_get_reader,napari-mat-file-reader.get_reader,['*.mat'],False,2.1,napari-mat-file-reader,0.0.2,,This is a simple wraper to read .mat files from Matlab,"# napari-mat-file-reader [![License BSD-3](https://img.shields.io/pypi/l/napari-mat-file-reader.svg?color=green)](https://github.com/rjlopez2/napari-mat-file-reader/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-mat-file-reader.svg?color=green)](https://pypi.org/project/napari-mat-file-reader) @@ -23595,8 +24671,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/rjlopez2/napari-mat-file-reader,Ruben Lopez,rjlopez2@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'mat73', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/rjlopez2/napari-mat-file-reader/issues', 'Documentation, https://github.com/rjlopez2/napari-mat-file-reader#README.md', 'Source Code, https://github.com/rjlopez2/napari-mat-file-reader', 'User Support, https://github.com/rjlopez2/napari-mat-file-reader/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-mat-file-reader.make_sample_data,Load sample data from napari mat file reader,napari_mat_file_reader._sample_data:make_sample_data,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-mat-file-reader.make_sample_data,unique_id.1,napari mat file reader,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -223,napari-mat-images,0.1.3,napari-mat-images,A plugin to load images stored in MATLAB .mat files with napari,Hector Munoz,BSD-3,https://github.com/hectormz/napari-mat-images,61fd3694e55ccdd1d53b7696,['conda'],,https://github.com/hectormz/napari-mat-images,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-mat-images,http://api.anaconda.org/packages/conda-forge/napari-mat-images,http://anaconda.org/conda-forge/napari-mat-images,['0.1.3'],0.1.3,0.1.3,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.3,conda-forge/napari-mat-images/0.1.3,1.0,0.0,2022-02-04 14:22:11.068000+00:00,2023-06-18 08:40:46.799000+00:00,conda,noarch/napari-mat-images-0.1.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core', 'h5py', 'numpy', 'pluggy', 'python >=3.6', 'scipy']",noarch,1643984486898.0,None-any-None,pyhd8ed1ab_0,2022-02-04 14:22:11.322000+00:00,dfd0a5a10d5e545fb8d1d6db3ffc8e37,None,11357.0,conda-forge/napari-mat-images/0.1.3/noarch/napari-mat-images-0.1.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-mat-images/0.1.3/noarch/napari-mat-images-0.1.3-pyhd8ed1ab_0.tar.bz2,conda,0.1.3,conda-forge,['main'],public,,0.2.1,,,,,,,2.1,napari-mat-images,0.1.3,['UNKNOWN'],A plugin to load images stored in MATLAB .mat files with napari,"# napari-mat-images +",text/markdown,https://github.com/rjlopez2/napari-mat-file-reader,Ruben Lopez,rjlopez2@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'mat73', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/rjlopez2/napari-mat-file-reader/issues', 'Documentation, https://github.com/rjlopez2/napari-mat-file-reader#README.md', 'Source Code, https://github.com/rjlopez2/napari-mat-file-reader', 'User Support, https://github.com/rjlopez2/napari-mat-file-reader/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-mat-file-reader.make_sample_data,Load sample data from napari mat file reader,napari_mat_file_reader._sample_data:make_sample_data,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-mat-file-reader.make_sample_data,unique_id.1,napari mat file reader,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +234,napari-mat-images,0.1.3,napari-mat-images,A plugin to load images stored in MATLAB .mat files with napari,Hector Munoz,BSD-3,https://github.com/hectormz/napari-mat-images,61fd3694e55ccdd1d53b7696,['conda'],,https://github.com/hectormz/napari-mat-images,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-mat-images,http://api.anaconda.org/packages/conda-forge/napari-mat-images,http://anaconda.org/conda-forge/napari-mat-images,['0.1.3'],0.1.3,0.1.3,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.3,conda-forge/napari-mat-images/0.1.3,1.0,0.0,2022-02-04 14:22:11.068000+00:00,2023-06-18 08:40:46.799000+00:00,conda,noarch/napari-mat-images-0.1.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core', 'h5py', 'numpy', 'pluggy', 'python >=3.6', 'scipy']",noarch,1643984486898.0,None-any-None,pyhd8ed1ab_0,2022-02-04 14:22:11.322000+00:00,dfd0a5a10d5e545fb8d1d6db3ffc8e37,None,11357.0,conda-forge/napari-mat-images/0.1.3/noarch/napari-mat-images-0.1.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-mat-images/0.1.3/noarch/napari-mat-images-0.1.3-pyhd8ed1ab_0.tar.bz2,conda,0.1.3,conda-forge,['main'],public,,0.2.1,,,,,,,2.1,napari-mat-images,0.1.3,['UNKNOWN'],A plugin to load images stored in MATLAB .mat files with napari,"# napari-mat-images [![PyPI version](https://img.shields.io/pypi/v/napari-mat-images.svg)](https://pypi.org/project/napari-mat-images) @@ -23662,8 +24738,8 @@ If you encounter any problems, please [file an issue](https://github.com/hectorm This [napari](https://github.com/napari/napari) plugin was generated with [Cookiecutter](https://github.com/audreyr/cookiecutter) along with [napari](https://github.com/napari/napari)\'s [cookiecutter-napari-plugin](https://github.com/napari/cookiecutter-napari-plugin) template. -",text/markdown,https://github.com/hectormz/napari-mat-images,Hector Munoz,hectormz.git@gmail.com,BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.6', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: Implementation :: CPython', 'Programming Language :: Python :: Implementation :: PyPy', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['dask[delayed]', 'h5py', 'numpy', 'pluggy', 'scipy']",>=3.6,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -224,napari-math,0.0.1b0,napari math,"Simple mathematical operations on image, point and surface layers.","Zach Marin, Talley Lambert",MIT,https://github.com/zacsimile/napari-math,61f3b42baf92e1173d2fdc9c,['conda'],,https://github.com/zacsimile/napari-math,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-math,http://api.anaconda.org/packages/conda-forge/napari-math,http://anaconda.org/conda-forge/napari-math,"['0.0.1a0', '0.0.1b0']",0.0.1b0,0.0.1b0,['noarch'],4.0,,['pyhd8ed1ab_0'],0.0.1a0,conda-forge/napari-math/0.0.1a0,1.0,0.0,2022-01-28 09:15:20.492000+00:00,2023-06-18 08:40:39.012000+00:00,conda,noarch/napari-math-0.0.1a0-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['napari', 'numpy', 'python >=3.7']",noarch,1643361163537.0,None-any-None,pyhd8ed1ab_0,2022-01-28 09:15:21.167000+00:00,e4573a1661bf255fe7ba362d9d147eb8,None,10087.0,conda-forge/napari-math/0.0.1a0/noarch/napari-math-0.0.1a0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-math/0.0.1a0/noarch/napari-math-0.0.1a0-pyhd8ed1ab_0.tar.bz2,conda,0.0.1a0,conda-forge,['main'],public,,0.2.1,napari-math.math_widget,Make math widget,napari_math._widget:make_math_widget,,,,2.1,napari-math,0.0.1b0,['UNKNOWN'],"Simple mathematical operations on image, point and surface layers.","# napari-math +",text/markdown,https://github.com/hectormz/napari-mat-images,Hector Munoz,hectormz.git@gmail.com,BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.6', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: Implementation :: CPython', 'Programming Language :: Python :: Implementation :: PyPy', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['dask[delayed]', 'h5py', 'numpy', 'pluggy', 'scipy']",>=3.6,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +235,napari-math,0.0.1b0,napari math,"Simple mathematical operations on image, point and surface layers.","Zach Marin, Talley Lambert",MIT,https://github.com/zacsimile/napari-math,61f3b42baf92e1173d2fdc9c,['conda'],,https://github.com/zacsimile/napari-math,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-math,http://api.anaconda.org/packages/conda-forge/napari-math,http://anaconda.org/conda-forge/napari-math,"['0.0.1a0', '0.0.1b0']",0.0.1b0,0.0.1b0,['noarch'],4.0,,['pyhd8ed1ab_0'],0.0.1a0,conda-forge/napari-math/0.0.1a0,1.0,0.0,2022-01-28 09:15:20.492000+00:00,2023-06-18 08:40:39.012000+00:00,conda,noarch/napari-math-0.0.1a0-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['napari', 'numpy', 'python >=3.7']",noarch,1643361163537.0,None-any-None,pyhd8ed1ab_0,2022-01-28 09:15:21.167000+00:00,e4573a1661bf255fe7ba362d9d147eb8,None,10087.0,conda-forge/napari-math/0.0.1a0/noarch/napari-math-0.0.1a0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-math/0.0.1a0/noarch/napari-math-0.0.1a0-pyhd8ed1ab_0.tar.bz2,conda,0.0.1a0,conda-forge,['main'],public,,0.2.1,napari-math.math_widget,Make math widget,napari_math._widget:make_math_widget,,,,2.1,napari-math,0.0.1b0,['UNKNOWN'],"Simple mathematical operations on image, point and surface layers.","# napari-math [![License](https://img.shields.io/pypi/l/napari-math.svg?color=green)](https://github.com/zacsimile/napari-math/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-math.svg?color=green)](https://pypi.org/project/napari-math) @@ -23733,8 +24809,8 @@ If you encounter any problems, please file an [issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/zacsimile/napari-math,"Zach Marin, Talley Lambert",zach.marin@yale.edu,MIT,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']",['numpy'],>=3.7,"['Bug Tracker, https://github.com/zacsimile/napari-math/issues', 'Documentation, https://github.com/zacsimile/napari-math#README.md', 'Source Code, https://github.com/zacsimile/napari-math', 'User Support, https://github.com/zacsimile/napari-math/issues']",,False,0.0.1b0,conda-forge/napari-math/0.0.1b0,,,,,conda,noarch/napari-math-0.0.1b0-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['napari', 'numpy', 'python >=3.7']",pyhd8ed1ab_0,1648544790191.0,None-any-None,noarch,2022-03-29 09:08:40.477000+00:00,ffc58e0348c11361dc5279ba5caf228d,None,10663.0,conda-forge/napari-math/0.0.1b0/noarch/napari-math-0.0.1b0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-math/0.0.1b0/noarch/napari-math-0.0.1b0-pyhd8ed1ab_0.tar.bz2,conda,0.0.1b0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-math.add_images_widget,Add images,napari_math._widget:add_images,napari-math.add_image_widget,Add image and scalar,napari_math._widget:add_image,napari-math.subtract_images_widget,Subtract images,napari_math._widget:subtract_images,napari-math.math_widget,Math operations,False,napari-math.add_images_widget,Add images,False,napari-math.add_image_widget,Add image and scalar,False,napari-math.subtract_images_widget,Subtract images,False,napari-math.subtract_image_widget,Subtract image and scalar,napari_math._widget:subtract_image,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-math.multiply_images_widget,Multiply images,napari_math._widget:multiply_images,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-math.multiply_image_widget,Multiply image by scalar,napari_math._widget:multiply_image,napari-math.divide_images_widget,Divide images,napari_math._widget:divide_images,napari-math.divide_image_widget,Divide image by scalar,napari_math._widget:divide_image,napari-math.and_images_widget,Logical AND images,napari_math._widget:and_images,napari-math.and_image_widget,Logical AND image and value,napari_math._widget:and_image,napari-math.or_images_widget,Logical OR images,napari_math._widget:or_images,,napari-math.subtract_image_widget,Subtract image and scalar,False,napari-math.add_images_widget,Multiply images,False,napari-math.multiply_image_widget,Multiply image by scalar,False,napari-math.divide_images_widget,Divide images,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -225,napari-matplotlib,2.0.3,napari Matplotlib,A plugin to use Matplotlib with napari,David Stansby,BSD-3-Clause,https://github.com/matplotlib/napari-matplotlib,62a0ff35253ae35429a295a0,['conda'],,https://github.com/matplotlib/napari-matplotlib,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-matplotlib,http://api.anaconda.org/packages/conda-forge/napari-matplotlib,http://anaconda.org/conda-forge/napari-matplotlib,"['0.2.1', '1.0.0', '1.0.1', '1.0.2', '1.1.0', '1.2.0', '2.0.0', '2.0.1', '2.0.2', '2.0.3']",2.0.3,2.0.3,['noarch'],31.0,https://github.com/matplotlib/napari-matplotlib,"['pyh9208f05_0', 'pyh9208f05_1', 'pyhd8ed1ab_0', 'pyhd8ed1ab_1']",0.2.1,conda-forge/napari-matplotlib/0.2.1,1.0,0.0,2022-06-08 19:57:38.889000+00:00,2024-07-13 13:45:40.786000+00:00,conda,noarch/napari-matplotlib-0.2.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['matplotlib-base', 'napari', 'numpy', 'python >=3.8']",noarch,1654718094489.0,None-any-None,pyhd8ed1ab_0,2022-06-08 19:57:39.308000+00:00,3513a1fbdcde05411ee5fd8f2e05c85d,None,66142.0,conda-forge/napari-matplotlib/0.2.1/noarch/napari-matplotlib-0.2.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-matplotlib/0.2.1/noarch/napari-matplotlib-0.2.1-pyhd8ed1ab_0.tar.bz2,conda,0.2.1,conda-forge,['main'],public,,0.2.1,napari-matplotlib.histogram,Make a histogram,napari_matplotlib:HistogramWidget,,,,2.1,napari-matplotlib,2.0.3,,A plugin to use Matplotlib with napari,"# napari-matplotlib +",text/markdown,https://github.com/zacsimile/napari-math,"Zach Marin, Talley Lambert",zach.marin@yale.edu,MIT,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']",['numpy'],>=3.7,"['Bug Tracker, https://github.com/zacsimile/napari-math/issues', 'Documentation, https://github.com/zacsimile/napari-math#README.md', 'Source Code, https://github.com/zacsimile/napari-math', 'User Support, https://github.com/zacsimile/napari-math/issues']",,False,0.0.1b0,conda-forge/napari-math/0.0.1b0,,,,,conda,noarch/napari-math-0.0.1b0-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['napari', 'numpy', 'python >=3.7']",pyhd8ed1ab_0,1648544790191.0,None-any-None,noarch,2022-03-29 09:08:40.477000+00:00,ffc58e0348c11361dc5279ba5caf228d,None,10663.0,conda-forge/napari-math/0.0.1b0/noarch/napari-math-0.0.1b0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-math/0.0.1b0/noarch/napari-math-0.0.1b0-pyhd8ed1ab_0.tar.bz2,conda,0.0.1b0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-math.add_images_widget,Add images,napari_math._widget:add_images,napari-math.add_image_widget,Add image and scalar,napari_math._widget:add_image,napari-math.subtract_images_widget,Subtract images,napari_math._widget:subtract_images,napari-math.math_widget,Math operations,False,napari-math.add_images_widget,Add images,False,napari-math.add_image_widget,Add image and scalar,False,napari-math.subtract_images_widget,Subtract images,False,napari-math.subtract_image_widget,Subtract image and scalar,napari_math._widget:subtract_image,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-math.multiply_images_widget,Multiply images,napari_math._widget:multiply_images,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-math.multiply_image_widget,Multiply image by scalar,napari_math._widget:multiply_image,napari-math.divide_images_widget,Divide images,napari_math._widget:divide_images,napari-math.divide_image_widget,Divide image by scalar,napari_math._widget:divide_image,napari-math.and_images_widget,Logical AND images,napari_math._widget:and_images,napari-math.and_image_widget,Logical AND image and value,napari_math._widget:and_image,,napari-math.subtract_image_widget,Subtract image and scalar,False,napari-math.add_images_widget,Multiply images,False,napari-math.multiply_image_widget,Multiply image by scalar,False,napari-math.divide_images_widget,Divide images,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +236,napari-matplotlib,3.0.0,napari Matplotlib,A plugin to use Matplotlib with napari,David Stansby,BSD-3-Clause,https://github.com/matplotlib/napari-matplotlib,62a0ff35253ae35429a295a0,['conda'],,https://github.com/matplotlib/napari-matplotlib,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-matplotlib,http://api.anaconda.org/packages/conda-forge/napari-matplotlib,http://anaconda.org/conda-forge/napari-matplotlib,"['0.2.1', '1.0.0', '1.0.1', '1.0.2', '1.1.0', '1.2.0', '2.0.0', '2.0.1', '2.0.2', '2.0.3', '3.0.0']",3.0.0,3.0.0,['noarch'],35.0,https://github.com/matplotlib/napari-matplotlib,"['pyh73487a3_0', 'pyh9208f05_0', 'pyh9208f05_1', 'pyhd8ed1ab_0', 'pyhd8ed1ab_1']",0.2.1,conda-forge/napari-matplotlib/0.2.1,1.0,0.0,2022-06-08 19:57:38.889000+00:00,2024-10-08 07:29:17.422000+00:00,conda,noarch/napari-matplotlib-0.2.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['matplotlib-base', 'napari', 'numpy', 'python >=3.8']",noarch,1654718094489.0,None-any-None,pyhd8ed1ab_0,2022-06-08 19:57:39.308000+00:00,3513a1fbdcde05411ee5fd8f2e05c85d,None,66142.0,conda-forge/napari-matplotlib/0.2.1/noarch/napari-matplotlib-0.2.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-matplotlib/0.2.1/noarch/napari-matplotlib-0.2.1-pyhd8ed1ab_0.tar.bz2,conda,0.2.1,conda-forge,['main'],public,,0.2.1,napari-matplotlib.histogram,Make a histogram,napari_matplotlib:HistogramWidget,,,,2.1,napari-matplotlib,3.0.0,,A plugin to use Matplotlib with napari,"# napari-matplotlib [![License](https://img.shields.io/pypi/l/napari-matplotlib.svg?color=green)](https://github.com/matplotlib/napari-matplotlib/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-matplotlib.svg?color=green)](https://pypi.org/project/napari-matplotlib) @@ -23751,7 +24827,7 @@ A plugin to create Matplotlib plots from napari layers ## Introduction `napari-matplotlib` is a bridge between `napari` and `matplotlib`, making it easy to create publication quality `Matplotlib` plots based on the data loaded in `napari` layers. -Documentaiton can be found at https://napari-matplotlib.github.io/ +Documentation can be found at https://napari-matplotlib.github.io/ ## Contributing @@ -23776,8 +24852,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/matplotlib/napari-matplotlib,David Stansby,d.stansby@ucl.ac.uk,BSD-3-Clause,"['Development Status :: 5 - Production/Stable', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Topic :: Software Development :: Testing']","['matplotlib', 'napari <0.5', 'numpy >=1.23', 'tinycss2', ""napari[all] ; extra == 'docs'"", ""numpydoc ; extra == 'docs'"", ""pydantic <2 ; extra == 'docs'"", ""pydata-sphinx-theme ; extra == 'docs'"", ""sphinx ; extra == 'docs'"", ""sphinx-automodapi ; extra == 'docs'"", ""sphinx-gallery ; extra == 'docs'"", ""napari[pyqt6_experimental] >=0.4.18 ; extra == 'testing'"", ""pooch ; extra == 'testing'"", ""pyqt6 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-mock ; extra == 'testing'"", ""pytest-mpl ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'"", 'pytest-xvfb ; (sys_platform == ""linux"") and extra == \'testing\'']",>=3.10,"['Bug Tracker, https://github.com/matplotlib/napari-matplotlib/issues', 'Documentation, https://napari-matplotlib.github.io', 'Source Code, https://github.com/matplotlib/napari-matplotlib', 'User Support, https://github.com/matplotlib/napari-matplotlib/issues']","['docs', 'testing']",False,1.0.0,conda-forge/napari-matplotlib/1.0.0,1.0.1,conda-forge/napari-matplotlib/1.0.1,1.0.2,conda-forge/napari-matplotlib/1.0.2,conda,noarch/napari-matplotlib-0.2.1-pyhd8ed1ab_1.tar.bz2,1.0,BSD-3-Clause,False,python,"['matplotlib-base', 'napari', 'numpy', 'python >=3.8']",pyhd8ed1ab_1,1654888212961.0,None-any-None,noarch,2022-06-10 19:13:26.265000+00:00,e947515d04c9b2630602798e867ebaa9,None,66272.0,conda-forge/napari-matplotlib/0.2.1/noarch/napari-matplotlib-0.2.1-pyhd8ed1ab_1.tar.bz2,//api.anaconda.org/download/conda-forge/napari-matplotlib/0.2.1/noarch/napari-matplotlib-0.2.1-pyhd8ed1ab_1.tar.bz2,conda,0.2.1,conda-forge,['main'],conda,noarch/napari-matplotlib-1.0.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['matplotlib-base', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'tinycss2']",noarch,1690323002066.0,None-any-None,pyhd8ed1ab_0,2023-07-25 22:12:07.777000+00:00,dfbeb91692b9a8f16a963ac1abdec523,c350c5bebc97643e01926def46e4bd995073ca2f7838afb0c8d2c4636329d2a6,274594.0,conda-forge/napari-matplotlib/1.0.0/noarch/napari-matplotlib-1.0.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-matplotlib/1.0.0/noarch/napari-matplotlib-1.0.0-pyhd8ed1ab_0.conda,conda,1.0.0,conda-forge,['main'],conda,noarch/napari-matplotlib-1.0.1-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['matplotlib-base', 'napari <0.4.18', 'numpy', 'python >=3.8', 'qtpy', 'tinycss2']",BSD-3-Clause,python,1690323697403.0,2023-07-25 22:24:05.525000+00:00,65b59f43c31052883e84ed3352393084,fca1bda72b63f5921683316904ead1590825eddc63547a957664ba9ebbda76f0,274469.0,conda-forge/napari-matplotlib/1.0.1/noarch/napari-matplotlib-1.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-matplotlib/1.0.1/noarch/napari-matplotlib-1.0.1-pyhd8ed1ab_0.conda,conda,1.0.1,conda-forge,['main'],,napari-matplotlib.scatter,Make a scatter plot of image intensities,napari_matplotlib:ScatterWidget,napari-matplotlib.features_scatter,Make a scatter plot of layer features,napari_matplotlib:FeaturesScatterWidget,napari-matplotlib.features_histogram,Plot feature histograms,napari_matplotlib:FeaturesHistogramWidget,napari-matplotlib.histogram,Histogram,False,napari-matplotlib.scatter,Scatter,False,napari-matplotlib.features_scatter,FeaturesScatter,False,napari-matplotlib.features_histogram,FeaturesHistogram,False,napari-matplotlib.slice,Plot a 1D slice,napari_matplotlib:SliceWidget,,,,,,,,,,,1.1.0,conda-forge/napari-matplotlib/1.1.0,1.2.0,conda-forge/napari-matplotlib/1.2.0,2.0.0,conda-forge/napari-matplotlib/2.0.0,conda,noarch/napari-matplotlib-1.0.2-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['matplotlib-base', 'napari <0.4.18', 'numpy', 'python >=3.8', 'qtpy', 'tinycss2']",noarch,1690547798098.0,None-any-None,pyh9208f05_0,2023-07-28 12:39:08.390000+00:00,f536419bc060c2bdac35725e4c912ef1,5d5aab10e097d445279305b7d958280ae4164287c7cfe9c6606d5bab40835e8d,275049.0,conda-forge/napari-matplotlib/1.0.2/noarch/napari-matplotlib-1.0.2-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-matplotlib/1.0.2/noarch/napari-matplotlib-1.0.2-pyh9208f05_0.conda,conda,1.0.2,conda-forge,['main'],conda,noarch/napari-matplotlib-1.0.2-pyh9208f05_1.conda,1.0,BSD-3-Clause,False,python,"['matplotlib-base', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'tinycss2']",noarch,1692796291840.0,None-any-None,pyh9208f05_1,2023-08-23 13:13:32.216000+00:00,e312de1a4057d545af7b0ea163dd6176,f9b97155ba0bfe0edee076b03ef8ea189faf4a858a9ee4a1995e418b0a7f0a56,274815.0,conda-forge/napari-matplotlib/1.0.2/noarch/napari-matplotlib-1.0.2-pyh9208f05_1.conda,//api.anaconda.org/download/conda-forge/napari-matplotlib/1.0.2/noarch/napari-matplotlib-1.0.2-pyh9208f05_1.conda,conda,1.0.2,conda-forge,['main'],conda,noarch/napari-matplotlib-1.1.0-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['matplotlib-base', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'tinycss2']",BSD-3-Clause,python,1692987252676.0,2023-08-25 18:17:04.890000+00:00,5be01bbde7eb0105a996cb0d0b9bc3cd,cc9d6b553b7f25db2ed276391eab5e52c120eb9f8a6c33f0de034d6da1fc8c9b,305732.0,conda-forge/napari-matplotlib/1.1.0/noarch/napari-matplotlib-1.1.0-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-matplotlib/1.1.0/noarch/napari-matplotlib-1.1.0-pyh9208f05_0.conda,conda,1.1.0,conda-forge,['main'],,,,,,,2.0.1,conda-forge/napari-matplotlib/2.0.1,2.0.2,conda-forge/napari-matplotlib/2.0.2,conda,noarch/napari-matplotlib-1.2.0-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['matplotlib-base', 'napari', 'numpy', 'python >=3.9', 'qtpy', 'tinycss2']",noarch,1699342107083.0,None-any-None,pyh9208f05_0,2023-11-07 07:30:18.208000+00:00,b99479f656be705c16258c4a27993442,42dda38bf71190d98d1c5dd5529af93940ea008225914a87c763ea8912f3f1dc,315503.0,conda-forge/napari-matplotlib/1.2.0/noarch/napari-matplotlib-1.2.0-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-matplotlib/1.2.0/noarch/napari-matplotlib-1.2.0-pyh9208f05_0.conda,conda,1.2.0,conda-forge,['main'],conda,noarch/napari-matplotlib-2.0.0-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['matplotlib-base', 'napari', 'numpy', 'python >=3.9', 'qtpy', 'tinycss2']",BSD-3-Clause,python,1705424508433.0,2024-01-16 17:03:59.461000+00:00,bdf694eba37e73bd92dbd50f4bb103c5,20c79b677d5b62349203c0fb47cbff76858ce357b106ea11f5f147c3f14f23e8,316953.0,conda-forge/napari-matplotlib/2.0.0/noarch/napari-matplotlib-2.0.0-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-matplotlib/2.0.0/noarch/napari-matplotlib-2.0.0-pyh9208f05_0.conda,conda,2.0.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,napari-matplotlib.slice,1D slice,False,,,,,,,,,,conda,noarch/napari-matplotlib-2.0.1-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['matplotlib-base', 'napari', 'numpy', 'python >=3.9', 'qtpy', 'tinycss2']",BSD-3-Clause,python,1706098257124.0,2024-01-24 12:12:49.185000+00:00,314ebf19fb6238cf87506356413af27e,7480ef03ec8ad356827b9fdffdff14ed3a274e1660ebb06dab9e5fdd4a4fdaf1,317452.0,conda-forge/napari-matplotlib/2.0.1/noarch/napari-matplotlib-2.0.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-matplotlib/2.0.1/noarch/napari-matplotlib-2.0.1-pyh9208f05_0.conda,conda,2.0.1,conda-forge,['main'],2.0.3,conda-forge/napari-matplotlib/2.0.3,conda,noarch/napari-matplotlib-2.0.2-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['matplotlib-base', 'napari <0.5', 'numpy', 'python >=3.9', 'qtpy', 'tinycss2']",BSD-3-Clause,1720861305116.0,2024-07-13 09:03:47.528000+00:00,6e5160e318d3bb67afbcc80f8f4c020c,238ce68519d3a1f30f5a5b262c54df0409061b0429cb97a1a0f7f8d54446fc4b,317275.0,conda-forge/napari-matplotlib/2.0.2/noarch/napari-matplotlib-2.0.2-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-matplotlib/2.0.2/noarch/napari-matplotlib-2.0.2-pyh9208f05_0.conda,conda,2.0.2,conda-forge,['main'],conda,noarch/napari-matplotlib-2.0.3-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['matplotlib-base', 'napari <0.5', 'numpy', 'python >=3.9', 'qtpy', 'tinycss2']",BSD-3-Clause,1720878213000.0,2024-07-13 13:45:38.587000+00:00,5e5a91b8c28e17c714f94c3b1ae46ee4,8190a074e87b29447dddae5e37f7bdfa0d39b0fb1ebbaa79a5e4dc78b82139ae,317756.0,conda-forge/napari-matplotlib/2.0.3/noarch/napari-matplotlib-2.0.3-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-matplotlib/2.0.3/noarch/napari-matplotlib-2.0.3-pyh9208f05_0.conda,conda,2.0.3,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,, -226,napari-mclabel,1.0.1.dev0,napari-mclabel,Napari plugin for semi-automatic labeling of macrophages,Jonas Utz,BSD-3-Clause,https://gitlab.cs.fau.de/xo04syge/mclabel,64ca27ac0352caf2c64b1ca0,['conda'],,https://pypi.org/project/napari-mclabel,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-mclabel,http://api.anaconda.org/packages/conda-forge/napari-mclabel,http://anaconda.org/conda-forge/napari-mclabel,['1.0.1.dev0'],1.0.1.dev0,1.0.1.dev0,['noarch'],3.0,https://github.com/jonasutz/mclabel,['pyh9208f05_0'],1.0.1.dev0,conda-forge/napari-mclabel/1.0.1.dev0,1.0,0.0,2023-08-02 09:53:45.535000+00:00,2023-08-02 09:53:48.142000+00:00,conda,noarch/napari-mclabel-1.0.1.dev0-pyh9208f05_0.conda,0.0,MIT,False,python,"['dask-core', 'h5py', 'imaris-ims-file-reader >=0.1.5', 'napari', 'napari-imaris-loader', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.8', 'scikit-image', 'scipy']",noarch,1690969905461.0,None-any-None,pyh9208f05_0,2023-08-02 09:53:46.004000+00:00,9868ae2622075fdf6c653096ba33f626,540b53a3b1c5d42cfcabdc0fe4f47cea8b4ca820ed3633d3f6a381deaed7bc65,16432.0,conda-forge/napari-mclabel/1.0.1.dev0/noarch/napari-mclabel-1.0.1.dev0-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-mclabel/1.0.1.dev0/noarch/napari-mclabel-1.0.1.dev0-pyh9208f05_0.conda,conda,1.0.1.dev0,conda-forge,['main'],public,,0.2.1,napari-mclabel.McLabel,McLabel,napari_mclabel.mclabel:McLabel,,,,2.1,napari-mclabel,1.0.1.dev0,,Napari plugin for semi-automatic labeling of macrophages,"# Napari McLabel +",text/markdown,https://github.com/matplotlib/napari-matplotlib,David Stansby,d.stansby@ucl.ac.uk,BSD-3-Clause,"['Development Status :: 5 - Production/Stable', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Topic :: Software Development :: Testing']","['matplotlib', 'napari >=0.5', 'numpy >=1.23', 'tinycss2', ""napari[all] ; extra == 'docs'"", ""numpydoc ; extra == 'docs'"", ""pydantic <2 ; extra == 'docs'"", ""pydata-sphinx-theme ; extra == 'docs'"", ""sphinx ; extra == 'docs'"", ""sphinx-automodapi ; extra == 'docs'"", ""sphinx-gallery ; extra == 'docs'"", ""napari[pyqt6_experimental] >=0.4.18 ; extra == 'testing'"", ""pooch ; extra == 'testing'"", ""pyqt6 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-mock ; extra == 'testing'"", ""pytest-mpl ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'"", 'pytest-xvfb ; (sys_platform == ""linux"") and extra == \'testing\'']",>=3.10,"['Bug Tracker, https://github.com/matplotlib/napari-matplotlib/issues', 'Documentation, https://napari-matplotlib.github.io', 'Source Code, https://github.com/matplotlib/napari-matplotlib', 'User Support, https://github.com/matplotlib/napari-matplotlib/issues']","['docs', 'testing']",False,1.0.0,conda-forge/napari-matplotlib/1.0.0,1.0.1,conda-forge/napari-matplotlib/1.0.1,1.0.2,conda-forge/napari-matplotlib/1.0.2,conda,noarch/napari-matplotlib-0.2.1-pyhd8ed1ab_1.tar.bz2,1.0,BSD-3-Clause,False,python,"['matplotlib-base', 'napari', 'numpy', 'python >=3.8']",pyhd8ed1ab_1,1654888212961.0,None-any-None,noarch,2022-06-10 19:13:26.265000+00:00,e947515d04c9b2630602798e867ebaa9,None,66272.0,conda-forge/napari-matplotlib/0.2.1/noarch/napari-matplotlib-0.2.1-pyhd8ed1ab_1.tar.bz2,//api.anaconda.org/download/conda-forge/napari-matplotlib/0.2.1/noarch/napari-matplotlib-0.2.1-pyhd8ed1ab_1.tar.bz2,conda,0.2.1,conda-forge,['main'],conda,noarch/napari-matplotlib-1.0.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['matplotlib-base', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'tinycss2']",noarch,1690323002066.0,None-any-None,pyhd8ed1ab_0,2023-07-25 22:12:07.777000+00:00,dfbeb91692b9a8f16a963ac1abdec523,c350c5bebc97643e01926def46e4bd995073ca2f7838afb0c8d2c4636329d2a6,274594.0,conda-forge/napari-matplotlib/1.0.0/noarch/napari-matplotlib-1.0.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-matplotlib/1.0.0/noarch/napari-matplotlib-1.0.0-pyhd8ed1ab_0.conda,conda,1.0.0,conda-forge,['main'],conda,noarch/napari-matplotlib-1.0.1-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['matplotlib-base', 'napari <0.4.18', 'numpy', 'python >=3.8', 'qtpy', 'tinycss2']",BSD-3-Clause,python,1690323697403.0,2023-07-25 22:24:05.525000+00:00,65b59f43c31052883e84ed3352393084,fca1bda72b63f5921683316904ead1590825eddc63547a957664ba9ebbda76f0,274469.0,conda-forge/napari-matplotlib/1.0.1/noarch/napari-matplotlib-1.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-matplotlib/1.0.1/noarch/napari-matplotlib-1.0.1-pyhd8ed1ab_0.conda,conda,1.0.1,conda-forge,['main'],,napari-matplotlib.scatter,Make a scatter plot of image intensities,napari_matplotlib:ScatterWidget,napari-matplotlib.features_scatter,Make a scatter plot of layer features,napari_matplotlib:FeaturesScatterWidget,napari-matplotlib.features_histogram,Plot feature histograms,napari_matplotlib:FeaturesHistogramWidget,napari-matplotlib.histogram,Histogram,False,napari-matplotlib.scatter,Scatter,False,napari-matplotlib.features_scatter,FeaturesScatter,False,napari-matplotlib.features_histogram,FeaturesHistogram,False,napari-matplotlib.slice,Plot a 1D slice,napari_matplotlib:SliceWidget,,,,,,,,,,,1.1.0,conda-forge/napari-matplotlib/1.1.0,1.2.0,conda-forge/napari-matplotlib/1.2.0,2.0.0,conda-forge/napari-matplotlib/2.0.0,conda,noarch/napari-matplotlib-1.0.2-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['matplotlib-base', 'napari <0.4.18', 'numpy', 'python >=3.8', 'qtpy', 'tinycss2']",noarch,1690547798098.0,None-any-None,pyh9208f05_0,2023-07-28 12:39:08.390000+00:00,f536419bc060c2bdac35725e4c912ef1,5d5aab10e097d445279305b7d958280ae4164287c7cfe9c6606d5bab40835e8d,275049.0,conda-forge/napari-matplotlib/1.0.2/noarch/napari-matplotlib-1.0.2-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-matplotlib/1.0.2/noarch/napari-matplotlib-1.0.2-pyh9208f05_0.conda,conda,1.0.2,conda-forge,['main'],conda,noarch/napari-matplotlib-1.0.2-pyh9208f05_1.conda,1.0,BSD-3-Clause,False,python,"['matplotlib-base', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'tinycss2']",noarch,1692796291840.0,None-any-None,pyh9208f05_1,2023-08-23 13:13:32.216000+00:00,e312de1a4057d545af7b0ea163dd6176,f9b97155ba0bfe0edee076b03ef8ea189faf4a858a9ee4a1995e418b0a7f0a56,274815.0,conda-forge/napari-matplotlib/1.0.2/noarch/napari-matplotlib-1.0.2-pyh9208f05_1.conda,//api.anaconda.org/download/conda-forge/napari-matplotlib/1.0.2/noarch/napari-matplotlib-1.0.2-pyh9208f05_1.conda,conda,1.0.2,conda-forge,['main'],conda,noarch/napari-matplotlib-1.1.0-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['matplotlib-base', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'tinycss2']",BSD-3-Clause,python,1692987252676.0,2023-08-25 18:17:04.890000+00:00,5be01bbde7eb0105a996cb0d0b9bc3cd,cc9d6b553b7f25db2ed276391eab5e52c120eb9f8a6c33f0de034d6da1fc8c9b,305732.0,conda-forge/napari-matplotlib/1.1.0/noarch/napari-matplotlib-1.1.0-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-matplotlib/1.1.0/noarch/napari-matplotlib-1.1.0-pyh9208f05_0.conda,conda,1.1.0,conda-forge,['main'],,,,,,,2.0.1,conda-forge/napari-matplotlib/2.0.1,2.0.2,conda-forge/napari-matplotlib/2.0.2,conda,noarch/napari-matplotlib-1.2.0-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['matplotlib-base', 'napari', 'numpy', 'python >=3.9', 'qtpy', 'tinycss2']",noarch,1699342107083.0,None-any-None,pyh9208f05_0,2023-11-07 07:30:18.208000+00:00,b99479f656be705c16258c4a27993442,42dda38bf71190d98d1c5dd5529af93940ea008225914a87c763ea8912f3f1dc,315503.0,conda-forge/napari-matplotlib/1.2.0/noarch/napari-matplotlib-1.2.0-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-matplotlib/1.2.0/noarch/napari-matplotlib-1.2.0-pyh9208f05_0.conda,conda,1.2.0,conda-forge,['main'],conda,noarch/napari-matplotlib-2.0.0-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['matplotlib-base', 'napari', 'numpy', 'python >=3.9', 'qtpy', 'tinycss2']",BSD-3-Clause,python,1705424508433.0,2024-01-16 17:03:59.461000+00:00,bdf694eba37e73bd92dbd50f4bb103c5,20c79b677d5b62349203c0fb47cbff76858ce357b106ea11f5f147c3f14f23e8,316953.0,conda-forge/napari-matplotlib/2.0.0/noarch/napari-matplotlib-2.0.0-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-matplotlib/2.0.0/noarch/napari-matplotlib-2.0.0-pyh9208f05_0.conda,conda,2.0.0,conda-forge,['main'],,,,,,,,,,,,,,,,,napari-matplotlib.slice,1D slice,False,,,,,,,,,,conda,noarch/napari-matplotlib-2.0.1-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['matplotlib-base', 'napari', 'numpy', 'python >=3.9', 'qtpy', 'tinycss2']",BSD-3-Clause,python,1706098257124.0,2024-01-24 12:12:49.185000+00:00,314ebf19fb6238cf87506356413af27e,7480ef03ec8ad356827b9fdffdff14ed3a274e1660ebb06dab9e5fdd4a4fdaf1,317452.0,conda-forge/napari-matplotlib/2.0.1/noarch/napari-matplotlib-2.0.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-matplotlib/2.0.1/noarch/napari-matplotlib-2.0.1-pyh9208f05_0.conda,conda,2.0.1,conda-forge,['main'],conda,noarch/napari-matplotlib-2.0.2-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['matplotlib-base', 'napari <0.5', 'numpy', 'python >=3.9', 'qtpy', 'tinycss2']",BSD-3-Clause,python,1720861305116.0,2024-07-13 09:03:47.528000+00:00,6e5160e318d3bb67afbcc80f8f4c020c,238ce68519d3a1f30f5a5b262c54df0409061b0429cb97a1a0f7f8d54446fc4b,317275.0,conda-forge/napari-matplotlib/2.0.2/noarch/napari-matplotlib-2.0.2-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-matplotlib/2.0.2/noarch/napari-matplotlib-2.0.2-pyh9208f05_0.conda,conda,2.0.2,conda-forge,['main'],2.0.3,conda-forge/napari-matplotlib/2.0.3,conda,noarch/napari-matplotlib-2.0.3-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['matplotlib-base', 'napari <0.5', 'numpy', 'python >=3.9', 'qtpy', 'tinycss2']",BSD-3-Clause,1720878213000.0,2024-07-13 13:45:38.587000+00:00,5e5a91b8c28e17c714f94c3b1ae46ee4,8190a074e87b29447dddae5e37f7bdfa0d39b0fb1ebbaa79a5e4dc78b82139ae,317756.0,conda-forge/napari-matplotlib/2.0.3/noarch/napari-matplotlib-2.0.3-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-matplotlib/2.0.3/noarch/napari-matplotlib-2.0.3-pyh9208f05_0.conda,conda,2.0.3,conda-forge,['main'],3.0.0,conda-forge/napari-matplotlib/3.0.0,conda,noarch/napari-matplotlib-3.0.0-pyh73487a3_0.conda,None-any-None,False,noarch,pyh73487a3_0,0.0,"['matplotlib-base', 'napari >=0.5', 'numpy', 'python >=3.9', 'qtpy', 'tinycss2']",BSD-3-Clause,1728372465389.0,2024-10-08 07:29:14.695000+00:00,e59ebec36b869c423f11796698a4fe14,bb3f2d8d948592c6e3a7616b103656e76575aff740dbf9b46019e5bb0e11b8be,333211.0,conda-forge/napari-matplotlib/3.0.0/noarch/napari-matplotlib-3.0.0-pyh73487a3_0.conda,//api.anaconda.org/download/conda-forge/napari-matplotlib/3.0.0/noarch/napari-matplotlib-3.0.0-pyh73487a3_0.conda,conda,3.0.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,, +237,napari-mclabel,1.0.1.dev0,napari-mclabel,Napari plugin for semi-automatic labeling of macrophages,Jonas Utz,BSD-3-Clause,https://gitlab.cs.fau.de/xo04syge/mclabel,64ca27ac0352caf2c64b1ca0,['conda'],,https://pypi.org/project/napari-mclabel,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-mclabel,http://api.anaconda.org/packages/conda-forge/napari-mclabel,http://anaconda.org/conda-forge/napari-mclabel,['1.0.1.dev0'],1.0.1.dev0,1.0.1.dev0,['noarch'],3.0,https://github.com/jonasutz/mclabel,['pyh9208f05_0'],1.0.1.dev0,conda-forge/napari-mclabel/1.0.1.dev0,1.0,0.0,2023-08-02 09:53:45.535000+00:00,2023-08-02 09:53:48.142000+00:00,conda,noarch/napari-mclabel-1.0.1.dev0-pyh9208f05_0.conda,0.0,MIT,False,python,"['dask-core', 'h5py', 'imaris-ims-file-reader >=0.1.5', 'napari', 'napari-imaris-loader', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.8', 'scikit-image', 'scipy']",noarch,1690969905461.0,None-any-None,pyh9208f05_0,2023-08-02 09:53:46.004000+00:00,9868ae2622075fdf6c653096ba33f626,540b53a3b1c5d42cfcabdc0fe4f47cea8b4ca820ed3633d3f6a381deaed7bc65,16432.0,conda-forge/napari-mclabel/1.0.1.dev0/noarch/napari-mclabel-1.0.1.dev0-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-mclabel/1.0.1.dev0/noarch/napari-mclabel-1.0.1.dev0-pyh9208f05_0.conda,conda,1.0.1.dev0,conda-forge,['main'],public,,0.2.1,napari-mclabel.McLabel,McLabel,napari_mclabel.mclabel:McLabel,,,,2.1,napari-mclabel,1.0.1.dev0,,Napari plugin for semi-automatic labeling of macrophages,"# Napari McLabel ## What is the purpose of this tool? @@ -23844,8 +24920,8 @@ isbn=""978-3-658-41657-7"" } ``` -",text/markdown,https://gitlab.cs.fau.de/xo04syge/mclabel,Jonas Utz,jonas.utz@fau.de,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari[all]', 'napari-plugin-engine (>=0.1.4)', 'imaris-ims-file-reader (>=0.1.5)', 'numpy', 'h5py', 'dask', 'napari-imaris-loader', 'scikit-image', 'scipy']",>=3.8,"['Bug Tracker, https://gitlab.cs.fau.de/xo04syge/mclabel/-/issues', 'Documentation, https://gitlab.cs.fau.de/xo04syge/mclabel/-/blob/main/README.md', 'Source Code, https://gitlab.cs.fau.de/xo04syge/mclabel', 'User Support, https://gitlab.cs.fau.de/xo04syge/mclabel/-/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-mclabel.McLabel,McLabel,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -227,napari-medical-image-formats,0.3.8,napari-medical-image-formats,A Plugin in order to read medical image formats such as DICOM and NIfTI,"Marc Boucsein, Marc Buckmakowski",BSD-3,https://github.com/MBPhys/napari-medical-image-formats,6209377c39552dcb590c29e1,['conda'],,https://github.com/MBPhys/napari-medical-image-formats,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-medical-image-formats,http://api.anaconda.org/packages/conda-forge/napari-medical-image-formats,http://anaconda.org/conda-forge/napari-medical-image-formats,['0.3.8'],0.3.8,0.3.8,['noarch'],3.0,,['pyhd8ed1ab_0'],0.3.8,conda-forge/napari-medical-image-formats/0.3.8,1.0,0.0,2022-02-13 16:53:14.366000+00:00,2023-06-18 08:40:51.135000+00:00,conda,noarch/napari-medical-image-formats-0.3.8-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['itk', 'itk-napari-conversion', 'napari-plugin-engine >=0.1.4', 'numpy', 'pydicom', 'python >=3.7', 'simpleitk']",noarch,1644770948388.0,None-any-None,pyhd8ed1ab_0,2022-02-13 16:53:15.064000+00:00,0e70f071592417e362cbce505bf944e6,None,11369.0,conda-forge/napari-medical-image-formats/0.3.8/noarch/napari-medical-image-formats-0.3.8-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-medical-image-formats/0.3.8/noarch/napari-medical-image-formats-0.3.8-pyhd8ed1ab_0.tar.bz2,conda,0.3.8,conda-forge,['main'],public,,0.2.1,napari-medical-image-formats.napari_write_image,napari_write_image,napari_medical_image_formats._writer:napari_write_image,napari-medical-image-formats.napari_get_reader,['*'],True,2.1,napari-medical-image-formats,0.3.8,['UNKNOWN'],A Plugin in order to read medical image formats such as DICOM and NIfTI,"# napari-medical-image-formats +",text/markdown,https://gitlab.cs.fau.de/xo04syge/mclabel,Jonas Utz,jonas.utz@fau.de,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari[all]', 'napari-plugin-engine (>=0.1.4)', 'imaris-ims-file-reader (>=0.1.5)', 'numpy', 'h5py', 'dask', 'napari-imaris-loader', 'scikit-image', 'scipy']",>=3.8,"['Bug Tracker, https://gitlab.cs.fau.de/xo04syge/mclabel/-/issues', 'Documentation, https://gitlab.cs.fau.de/xo04syge/mclabel/-/blob/main/README.md', 'Source Code, https://gitlab.cs.fau.de/xo04syge/mclabel', 'User Support, https://gitlab.cs.fau.de/xo04syge/mclabel/-/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-mclabel.McLabel,McLabel,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +238,napari-medical-image-formats,0.3.8,napari-medical-image-formats,A Plugin in order to read medical image formats such as DICOM and NIfTI,"Marc Boucsein, Marc Buckmakowski",BSD-3,https://github.com/MBPhys/napari-medical-image-formats,6209377c39552dcb590c29e1,['conda'],,https://github.com/MBPhys/napari-medical-image-formats,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-medical-image-formats,http://api.anaconda.org/packages/conda-forge/napari-medical-image-formats,http://anaconda.org/conda-forge/napari-medical-image-formats,['0.3.8'],0.3.8,0.3.8,['noarch'],3.0,,['pyhd8ed1ab_0'],0.3.8,conda-forge/napari-medical-image-formats/0.3.8,1.0,0.0,2022-02-13 16:53:14.366000+00:00,2023-06-18 08:40:51.135000+00:00,conda,noarch/napari-medical-image-formats-0.3.8-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['itk', 'itk-napari-conversion', 'napari-plugin-engine >=0.1.4', 'numpy', 'pydicom', 'python >=3.7', 'simpleitk']",noarch,1644770948388.0,None-any-None,pyhd8ed1ab_0,2022-02-13 16:53:15.064000+00:00,0e70f071592417e362cbce505bf944e6,None,11369.0,conda-forge/napari-medical-image-formats/0.3.8/noarch/napari-medical-image-formats-0.3.8-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-medical-image-formats/0.3.8/noarch/napari-medical-image-formats-0.3.8-pyhd8ed1ab_0.tar.bz2,conda,0.3.8,conda-forge,['main'],public,,0.2.1,napari-medical-image-formats.napari_write_image,napari_write_image,napari_medical_image_formats._writer:napari_write_image,napari-medical-image-formats.napari_get_reader,['*'],True,2.1,napari-medical-image-formats,0.3.8,['UNKNOWN'],A Plugin in order to read medical image formats such as DICOM and NIfTI,"# napari-medical-image-formats [![License](https://img.shields.io/pypi/l/napari-medical-image-formats.svg?color=green)](https://github.com/MBPhys/napari-medical-image-formats/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-medical-image-formats.svg?color=green)](https://pypi.org/project/napari-medical-image-formats) @@ -23893,8 +24969,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/MBPhys/napari-medical-image-formats,"Marc Boucsein, Marc Buckmakowski",,BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'pydicom', 'SimpleITK', 'itk', 'itk-napari-conversion']",>=3.7,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-medical-image-formats.napari_write_labels,napari_write_labels,napari_medical_image_formats._writer:napari_write_labels,,,,,,,,,,,,,,,,,,,,,,napari-medical-image-formats.napari_write_image,['image'],image,napari-medical-image-formats.napari_write_labels,['labels'],,labels,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -228,napari-melt-pool-tracker,0.1.2,Melt Pool Tracker,Plugin for tracking the width and depth of the melt pool and keyhole in x-ray images of laser powder bed fusion experiments.,Florian Aymanns,BSD-3-Clause,https://github.com/EPFL-Center-for-Imaging/napari-melt-pool-tracker,655933eaa518ee4c21964b43,['conda'],,https://pypi.org/project/napari-melt-pool-tracker,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-melt-pool-tracker,http://api.anaconda.org/packages/conda-forge/napari-melt-pool-tracker,http://anaconda.org/conda-forge/napari-melt-pool-tracker,['0.1.1'],0.1.1,0.1.1,['noarch'],3.0,https://github.com/faymanns/napari-melt-pool-tracker,['pyh9208f05_0'],0.1.1,conda-forge/napari-melt-pool-tracker/0.1.1,1.0,0.0,2023-11-18 22:00:07.783000+00:00,2023-11-18 22:00:10.960000+00:00,conda,noarch/napari-melt-pool-tracker-0.1.1-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['h5py', 'magicgui', 'napari', 'napari-cursor-tracker', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scikit-learn', 'tifffile']",noarch,1700344629345.0,None-any-None,pyh9208f05_0,2023-11-18 22:00:08.213000+00:00,3235915c7eb66f39bd9a8af7da4eb6a5,3954d798fd112ce09042aa5a2cee75df0914e29f8822b5b417dc8973657324e2,12004176.0,conda-forge/napari-melt-pool-tracker/0.1.1/noarch/napari-melt-pool-tracker-0.1.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-melt-pool-tracker/0.1.1/noarch/napari-melt-pool-tracker-0.1.1-pyh9208f05_0.conda,conda,0.1.1,conda-forge,['main'],public,,0.2.1,napari-melt-pool-tracker.get_reader,Open data with Melt Pool Tracker,napari_melt_pool_tracker._reader:napari_get_reader,napari-melt-pool-tracker.get_reader,['*.h5'],False,2.1,napari-melt-pool-tracker,0.1.2,,Plugin for tracking the width and depth of the melt pool and keyhole in x-ray images of laser powder bed fusion experiments.," +",text/markdown,https://github.com/MBPhys/napari-medical-image-formats,"Marc Boucsein, Marc Buckmakowski",,BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'pydicom', 'SimpleITK', 'itk', 'itk-napari-conversion']",>=3.7,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-medical-image-formats.napari_write_labels,napari_write_labels,napari_medical_image_formats._writer:napari_write_labels,,,,,,,,,,,,,,,,,,,,,,napari-medical-image-formats.napari_write_image,['image'],image,napari-medical-image-formats.napari_write_labels,['labels'],,labels,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +239,napari-melt-pool-tracker,0.1.2,Melt Pool Tracker,Plugin for tracking the width and depth of the melt pool and keyhole in x-ray images of laser powder bed fusion experiments.,Florian Aymanns,BSD-3-Clause,https://github.com/EPFL-Center-for-Imaging/napari-melt-pool-tracker,655933eaa518ee4c21964b43,['conda'],,https://pypi.org/project/napari-melt-pool-tracker,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-melt-pool-tracker,http://api.anaconda.org/packages/conda-forge/napari-melt-pool-tracker,http://anaconda.org/conda-forge/napari-melt-pool-tracker,['0.1.1'],0.1.1,0.1.1,['noarch'],3.0,https://github.com/faymanns/napari-melt-pool-tracker,['pyh9208f05_0'],0.1.1,conda-forge/napari-melt-pool-tracker/0.1.1,1.0,0.0,2023-11-18 22:00:07.783000+00:00,2023-11-18 22:00:10.960000+00:00,conda,noarch/napari-melt-pool-tracker-0.1.1-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['h5py', 'magicgui', 'napari', 'napari-cursor-tracker', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image', 'scikit-learn', 'tifffile']",noarch,1700344629345.0,None-any-None,pyh9208f05_0,2023-11-18 22:00:08.213000+00:00,3235915c7eb66f39bd9a8af7da4eb6a5,3954d798fd112ce09042aa5a2cee75df0914e29f8822b5b417dc8973657324e2,12004176.0,conda-forge/napari-melt-pool-tracker/0.1.1/noarch/napari-melt-pool-tracker-0.1.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-melt-pool-tracker/0.1.1/noarch/napari-melt-pool-tracker-0.1.1-pyh9208f05_0.conda,conda,0.1.1,conda-forge,['main'],public,,0.2.1,napari-melt-pool-tracker.get_reader,Open data with Melt Pool Tracker,napari_melt_pool_tracker._reader:napari_get_reader,napari-melt-pool-tracker.get_reader,['*.h5'],False,2.1,napari-melt-pool-tracker,0.1.2,,Plugin for tracking the width and depth of the melt pool and keyhole in x-ray images of laser powder bed fusion experiments.," # napari-melt-pool-tracker @@ -24021,8 +25097,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/EPFL-Center-for-Imaging/napari-melt-pool-tracker,Florian Aymanns,florian.aymanns@epfl.ch,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'h5py', 'napari-cursor-tracker', 'napari', 'pandas', 'scikit-image', 'tifffile', 'scipy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-melt-pool-tracker.write_multiple,Save multi-layer data with Melt Pool Tracker,napari_melt_pool_tracker._writer:write_multiple,napari-melt-pool-tracker.write_single_image,Save image data with Melt Pool Tracker,napari_melt_pool_tracker._writer:write_single_image,napari-melt-pool-tracker.make_sample_data,Load sample data from Melt Pool Tracker,napari_melt_pool_tracker._sample_data:make_sample_data,napari-melt-pool-tracker.make_qwidget,Melt pool tracker,False,,,,,,,,,,napari-melt-pool-tracker.make_qwidget,Make melt pool tracker QWidget,napari_melt_pool_tracker._widget:MeltPoolTrackerQWidget,napari-melt-pool-tracker.write_multiple,"['image*', 'labels*']",,napari-melt-pool-tracker.write_single_image,['image'],['.npy'],,napari-melt-pool-tracker.make_sample_data,unique_id.1,Melt Pool Tracker,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -229,napari-merge-stardist-masks,0.1.1,StarDist OPP,Segment non-star-convex objects with StarDist by merging masks.,Niklas Netter,BSD-3-Clause,https://github.com/gatoniel/napari-merge-stardist-masks,656e2a8acc49ea30a98d0fe4,['conda'],,https://pypi.org/project/napari-merge-stardist-masks,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-merge-stardist-masks,http://api.anaconda.org/packages/conda-forge/napari-merge-stardist-masks,http://anaconda.org/conda-forge/napari-merge-stardist-masks,['0.1.1'],0.1.1,0.1.1,['noarch'],3.0,https://github.com/gatoniel/napari-merge-stardist-masks,['pyh9208f05_0'],0.1.1,conda-forge/napari-merge-stardist-masks/0.1.1,1.0,0.0,2023-12-04 19:37:42.540000+00:00,2023-12-04 19:37:46.382000+00:00,conda,noarch/napari-merge-stardist-masks-0.1.1-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['importlib-resources', 'magicgui', 'merge-stardist-masks >=0.1.0', 'numpy', 'python >=3.8,<3.11', 'qtpy', 'stardist-napari >=2022.7.5']",noarch,1701718476198.0,None-any-None,pyh9208f05_0,2023-12-04 19:37:43.043000+00:00,fd17af8ef145a43fee696dda1365e440,de5ef9a745e28ec99dfdf836fbd213e9942beb7fcda7b77e384de722043c2fa8,3428367.0,conda-forge/napari-merge-stardist-masks/0.1.1/noarch/napari-merge-stardist-masks-0.1.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-merge-stardist-masks/0.1.1/noarch/napari-merge-stardist-masks-0.1.1-pyh9208f05_0.conda,conda,0.1.1,conda-forge,['main'],public,,0.2.1,napari-merge-stardist-masks.stardist_opp_sample_data,Load sample data for StarDist OPP,napari_merge_stardist_masks._sample_data:stardist_opp_sample_data,,,,2.1,napari-merge-stardist-masks,0.1.1,,Segment non-star-convex objects with StarDist by merging masks.,"# StarDist OPP napari plugin +",text/markdown,https://github.com/EPFL-Center-for-Imaging/napari-melt-pool-tracker,Florian Aymanns,florian.aymanns@epfl.ch,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'h5py', 'napari-cursor-tracker', 'napari', 'pandas', 'scikit-image', 'tifffile', 'scipy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-melt-pool-tracker.write_multiple,Save multi-layer data with Melt Pool Tracker,napari_melt_pool_tracker._writer:write_multiple,napari-melt-pool-tracker.write_single_image,Save image data with Melt Pool Tracker,napari_melt_pool_tracker._writer:write_single_image,napari-melt-pool-tracker.make_sample_data,Load sample data from Melt Pool Tracker,napari_melt_pool_tracker._sample_data:make_sample_data,napari-melt-pool-tracker.make_qwidget,Melt pool tracker,False,,,,,,,,,,napari-melt-pool-tracker.make_qwidget,Make melt pool tracker QWidget,napari_melt_pool_tracker._widget:MeltPoolTrackerQWidget,napari-melt-pool-tracker.write_multiple,"['image*', 'labels*']",,napari-melt-pool-tracker.write_single_image,['image'],['.npy'],,napari-melt-pool-tracker.make_sample_data,unique_id.1,Melt Pool Tracker,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +240,napari-merge-stardist-masks,0.1.1,StarDist OPP,Segment non-star-convex objects with StarDist by merging masks.,Niklas Netter,BSD-3-Clause,https://github.com/gatoniel/napari-merge-stardist-masks,656e2a8acc49ea30a98d0fe4,['conda'],,https://pypi.org/project/napari-merge-stardist-masks,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-merge-stardist-masks,http://api.anaconda.org/packages/conda-forge/napari-merge-stardist-masks,http://anaconda.org/conda-forge/napari-merge-stardist-masks,['0.1.1'],0.1.1,0.1.1,['noarch'],3.0,https://github.com/gatoniel/napari-merge-stardist-masks,['pyh9208f05_0'],0.1.1,conda-forge/napari-merge-stardist-masks/0.1.1,1.0,0.0,2023-12-04 19:37:42.540000+00:00,2023-12-04 19:37:46.382000+00:00,conda,noarch/napari-merge-stardist-masks-0.1.1-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['importlib-resources', 'magicgui', 'merge-stardist-masks >=0.1.0', 'numpy', 'python >=3.8,<3.11', 'qtpy', 'stardist-napari >=2022.7.5']",noarch,1701718476198.0,None-any-None,pyh9208f05_0,2023-12-04 19:37:43.043000+00:00,fd17af8ef145a43fee696dda1365e440,de5ef9a745e28ec99dfdf836fbd213e9942beb7fcda7b77e384de722043c2fa8,3428367.0,conda-forge/napari-merge-stardist-masks/0.1.1/noarch/napari-merge-stardist-masks-0.1.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-merge-stardist-masks/0.1.1/noarch/napari-merge-stardist-masks-0.1.1-pyh9208f05_0.conda,conda,0.1.1,conda-forge,['main'],public,,0.2.1,napari-merge-stardist-masks.stardist_opp_sample_data,Load sample data for StarDist OPP,napari_merge_stardist_masks._sample_data:stardist_opp_sample_data,,,,2.1,napari-merge-stardist-masks,0.1.1,,Segment non-star-convex objects with StarDist by merging masks.,"# StarDist OPP napari plugin [![License BSD-3](https://img.shields.io/pypi/l/napari-merge-stardist-masks.svg?color=green)](https://github.com/gatoniel/napari-merge-stardist-masks/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-merge-stardist-masks.svg?color=green)](https://pypi.org/project/napari-merge-stardist-masks) @@ -24115,8 +25191,8 @@ This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookie [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/gatoniel/napari-merge-stardist-masks,Niklas Netter,niknett@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'importlib-resources', 'stardist-napari >=2022.7.5', 'merge-stardist-masks >=0.1.0', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/gatoniel/napari-merge-stardist-masks/issues', 'Documentation, https://github.com/gatoniel/napari-merge-stardist-masks#README.md', 'Source Code, https://github.com/gatoniel/napari-merge-stardist-masks', 'User Support, https://github.com/gatoniel/napari-merge-stardist-masks/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-merge-stardist-masks.stardist_opp_widget,StarDist OPP,napari_merge_stardist_masks._widget:StarDistOPPWidget,,,,,,,napari-merge-stardist-masks.stardist_opp_widget,StarDist OPP,False,,,,,,,,,,,,,,,,,,,,napari-merge-stardist-masks.stardist_opp_sample_data,unique_id.1,StarDist OPP sample data,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -230,napari-meshio,0.0.1,meshio,I/O for mesh files.,Genevieve Buckley,MIT,https://github.com/GenevieveBuckley/napari-meshio,6425bb6460fdb0f2a5ce509e,['conda'],,https://github.com/GenevieveBuckley/napari-meshio,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-meshio,http://api.anaconda.org/packages/conda-forge/napari-meshio,http://anaconda.org/conda-forge/napari-meshio,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-meshio/0.0.1,1.0,0.0,2023-03-30 16:39:56.748000+00:00,2023-06-18 17:27:55.907000+00:00,conda,noarch/napari-meshio-0.0.1-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['meshio', 'numpy', 'pooch', 'python >=3.8', 'rich']",noarch,1680194335365.0,None-any-None,pyhd8ed1ab_0,2023-03-30 16:39:57.409000+00:00,9a4a481cb08dab6621b59f56e13e8531,057db69b673aa2bf91e5aa757a34ab24a3c52d53b70f2a7aca4a1bf8c8da882b,17563.0,conda-forge/napari-meshio/0.0.1/noarch/napari-meshio-0.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-meshio/0.0.1/noarch/napari-meshio-0.0.1-pyhd8ed1ab_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-meshio.get_reader,Open data with meshio,napari_meshio._reader:napari_get_reader,napari-meshio.get_reader,"['*.inp', '*.msh', '*.avs', '*.cgns', '*.xml', '*.e', '*.exo', '*.f3grid', '*.h5m', '*.mdpa', '*.mesh', '*.meshb', '*.med', '*.bdf', '*.fem', '*.nas', '*.vol', '*.vol.gz', '*.msh', '*.obj', '*.off', '*.post', '*.post.gz', '*.dato', '*.dato.gz', '*.ply', '*.stl', '*.dat', '*.node', '*.ele', '*.su2', '*.ugrid', '*.vtk', '*.vtu', '*.wkt', '*.xdmf', '*.xmf']",False,2.1,napari-meshio,0.0.1,,I/O for mesh files.,"# napari-meshio +",text/markdown,https://github.com/gatoniel/napari-merge-stardist-masks,Niklas Netter,niknett@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'importlib-resources', 'stardist-napari >=2022.7.5', 'merge-stardist-masks >=0.1.0', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/gatoniel/napari-merge-stardist-masks/issues', 'Documentation, https://github.com/gatoniel/napari-merge-stardist-masks#README.md', 'Source Code, https://github.com/gatoniel/napari-merge-stardist-masks', 'User Support, https://github.com/gatoniel/napari-merge-stardist-masks/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-merge-stardist-masks.stardist_opp_widget,StarDist OPP,napari_merge_stardist_masks._widget:StarDistOPPWidget,,,,,,,napari-merge-stardist-masks.stardist_opp_widget,StarDist OPP,False,,,,,,,,,,,,,,,,,,,,napari-merge-stardist-masks.stardist_opp_sample_data,unique_id.1,StarDist OPP sample data,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +241,napari-meshio,0.0.1,meshio,I/O for mesh files.,Genevieve Buckley,MIT,https://github.com/GenevieveBuckley/napari-meshio,6425bb6460fdb0f2a5ce509e,['conda'],,https://github.com/GenevieveBuckley/napari-meshio,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-meshio,http://api.anaconda.org/packages/conda-forge/napari-meshio,http://anaconda.org/conda-forge/napari-meshio,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-meshio/0.0.1,1.0,0.0,2023-03-30 16:39:56.748000+00:00,2023-06-18 17:27:55.907000+00:00,conda,noarch/napari-meshio-0.0.1-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['meshio', 'numpy', 'pooch', 'python >=3.8', 'rich']",noarch,1680194335365.0,None-any-None,pyhd8ed1ab_0,2023-03-30 16:39:57.409000+00:00,9a4a481cb08dab6621b59f56e13e8531,057db69b673aa2bf91e5aa757a34ab24a3c52d53b70f2a7aca4a1bf8c8da882b,17563.0,conda-forge/napari-meshio/0.0.1/noarch/napari-meshio-0.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-meshio/0.0.1/noarch/napari-meshio-0.0.1-pyhd8ed1ab_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-meshio.get_reader,Open data with meshio,napari_meshio._reader:napari_get_reader,napari-meshio.get_reader,"['*.inp', '*.msh', '*.avs', '*.cgns', '*.xml', '*.e', '*.exo', '*.f3grid', '*.h5m', '*.mdpa', '*.mesh', '*.meshb', '*.med', '*.bdf', '*.fem', '*.nas', '*.vol', '*.vol.gz', '*.msh', '*.obj', '*.off', '*.post', '*.post.gz', '*.dato', '*.dato.gz', '*.ply', '*.stl', '*.dat', '*.node', '*.ele', '*.su2', '*.ugrid', '*.vtk', '*.vtu', '*.wkt', '*.xdmf', '*.xmf']",False,2.1,napari-meshio,0.0.1,,I/O for mesh files.,"# napari-meshio [![License MIT](https://img.shields.io/pypi/l/napari-meshio.svg?color=green)](https://github.com/GenevieveBuckley/napari-meshio/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-meshio.svg?color=green)](https://pypi.org/project/napari-meshio) @@ -24281,8 +25357,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc ---------------------------------- This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template. -",text/markdown,https://github.com/GenevieveBuckley/napari-meshio,Genevieve Buckley,yourname@example.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'meshio', 'pooch', 'rich', ""mkdocs ; extra == 'testing'"", ""mkdocs-gen-files ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/GenevieveBuckley/napari-meshio/issues', 'Documentation, https://github.com/GenevieveBuckley/napari-meshio#README.md', 'Source Code, https://github.com/GenevieveBuckley/napari-meshio', 'User Support, https://github.com/GenevieveBuckley/napari-meshio/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-meshio.write_multiple,Save multi-layer data with meshio,napari_meshio._writer:write_multiple,napari-meshio.write_single_surface,Save image data with meshio,napari_meshio._writer:write_single_surface,napari-meshio.bunny,"Load sample data from meshio, Stanford bunny mesh data",napari_meshio._sample_data:bunny,,,,,,,,,,,,,,,,napari-meshio.write_multiple,['surface*'],,napari-meshio.write_single_surface,['surface'],"['.inp', '.msh', '.avs', '.cgns', '.xml', '.e', '.exo', '.f3grid', '.h5m', '.mdpa', '.mesh', '.meshb', '.med', '.bdf', '.fem', '.nas', '.vol', '.vol.gz', '.msh', '.obj', '.off', '.post', '.post.gz', '.dato', '.dato.gz', '.ply', '.stl', '.dat', '.node', '.ele', '.su2', '.ugrid', '.vtk', '.vtu', '.wkt', '.xdmf', '.xmf']",,napari-meshio.bunny,bunny,bunny,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -231,napari-mesofield,0.1.0,MesoField,"A plugin that extends napari functionality as an image acquisition software to automate multi-modal experimental control, setup, and analysis for mesoscopic widefield acquistion of 1P epiflourescent signals in the mouse cortex.",Jacob Gronemeyer," +",text/markdown,https://github.com/GenevieveBuckley/napari-meshio,Genevieve Buckley,yourname@example.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'meshio', 'pooch', 'rich', ""mkdocs ; extra == 'testing'"", ""mkdocs-gen-files ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/GenevieveBuckley/napari-meshio/issues', 'Documentation, https://github.com/GenevieveBuckley/napari-meshio#README.md', 'Source Code, https://github.com/GenevieveBuckley/napari-meshio', 'User Support, https://github.com/GenevieveBuckley/napari-meshio/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-meshio.write_multiple,Save multi-layer data with meshio,napari_meshio._writer:write_multiple,napari-meshio.write_single_surface,Save image data with meshio,napari_meshio._writer:write_single_surface,napari-meshio.bunny,"Load sample data from meshio, Stanford bunny mesh data",napari_meshio._sample_data:bunny,,,,,,,,,,,,,,,,napari-meshio.write_multiple,['surface*'],,napari-meshio.write_single_surface,['surface'],"['.inp', '.msh', '.avs', '.cgns', '.xml', '.e', '.exo', '.f3grid', '.h5m', '.mdpa', '.mesh', '.meshb', '.med', '.bdf', '.fem', '.nas', '.vol', '.vol.gz', '.msh', '.obj', '.off', '.post', '.post.gz', '.dato', '.dato.gz', '.ply', '.stl', '.dat', '.node', '.ele', '.su2', '.ugrid', '.vtk', '.vtu', '.wkt', '.xdmf', '.xmf']",,napari-meshio.bunny,bunny,bunny,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +242,napari-mesofield,0.1.0,MesoField,"A plugin that extends napari functionality as an image acquisition software to automate multi-modal experimental control, setup, and analysis for mesoscopic widefield acquistion of 1P epiflourescent signals in the mouse cortex.",Jacob Gronemeyer," Mozilla Public License Version 2.0 ================================== @@ -25097,8 +26173,8 @@ Exhibit B - ""Incompatible With Secondary Licenses"" Notice This Source Code Form is ""Incompatible With Secondary Licenses"", as defined by the Mozilla Public License, v. 2.0. -","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Mozilla Public License 2.0 (MPL 2.0)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.9,"['Bug Tracker, https://github.com/Gronemeyer/napari-mesofield/issues', 'Documentation, https://github.com/Gronemeyer/napari-mesofield#README.md', 'Source Code, https://github.com/Gronemeyer/napari-mesofield', 'User Support, https://github.com/Gronemeyer/napari-mesofield/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",napari-mesofield.write_multiple,Save multi-layer data with MesoField,mesofield._writer:write_multiple,napari-mesofield.write_single_image,Save image data with MesoField,mesofield._writer:write_single_image,napari-mesofield.make_sample_data,Load sample data from MesoField,mesofield._sample_data:make_sample_data,napari-mesofield.make_container_widget,Container Threshold,False,napari-mesofield.make_magic_widget,Magic Threshold,False,napari-mesofield.make_function_widget,Autogenerate Threshold,True,napari-mesofield.make_qwidget,Example QWidget,False,napari-mesofield.make_container_widget,Make threshold Container widget,mesofield:ImageThreshold,napari-mesofield.write_multiple,"['image*', 'labels*']",,napari-mesofield.write_single_image,['image'],['.npy'],,napari-mesofield.make_sample_data,unique_id.1,MesoField,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-mesofield.make_magic_widget,Make threshold magic widget,mesofield:threshold_magic_widget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-mesofield.make_function_widget,Make threshold function widget,mesofield:threshold_autogenerate_widget,napari-mesofield.make_qwidget,Make example QWidget,mesofield:ExampleQWidget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -232,napari-metroid,0.0.5,napari METROID,This napari plugin creates several regions of interest of similar area over cells in a fluorescence video (2D+time). It then gets ROIs means over time and performs signal denoising: fixes photobleaching and separates signal from noise by means of blind source separation (with or without wavelet filtering).,Marcelo Leomil Zoccoler,BSD-3-Clause,https://github.com/zoccoler/napari-metroid,62ff49dac954963b869013ee,['conda'],,https://github.com/zoccoler/napari-metroid,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-metroid,http://api.anaconda.org/packages/conda-forge/napari-metroid,http://anaconda.org/conda-forge/napari-metroid,['0.0.5'],0.0.5,0.0.5,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.5,conda-forge/napari-metroid/0.0.5,1.0,0.0,2022-08-19 08:29:09.950000+00:00,2023-06-18 08:42:20.974000+00:00,conda,noarch/napari-metroid-0.0.5-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['matplotlib-base', 'napari-skimage-regionprops >=0.3.1', 'numpy', 'python >=3.7', 'scikit-image', 'scikit-learn', 'scipy', 'statsmodels']",noarch,1660897604740.0,None-any-None,pyhd8ed1ab_0,2022-08-19 08:29:10.449000+00:00,0c44764145c01330438489c54c217758,None,451721.0,conda-forge/napari-metroid/0.0.5/noarch/napari-metroid-0.0.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-metroid/0.0.5/noarch/napari-metroid-0.0.5-pyhd8ed1ab_0.tar.bz2,conda,0.0.5,conda-forge,['main'],public,,0.2.1,napari-metroid.write_multiple,Save multi-layer data with napari METROID,napari_metroid._writer:write_multiple,,,,2.1,napari-metroid,0.0.5,['UNKNOWN'],This napari plugin creates several regions of interest of similar area over cells in a fluorescence video (2D+time). It then gets ROIs means over time and performs signal denoising: fixes photobleaching and separates signal from noise by means of blind source separation (with or without wavelet filtering).,"# napari-metroid +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Mozilla Public License 2.0 (MPL 2.0)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.9,"['Bug Tracker, https://github.com/Gronemeyer/napari-mesofield/issues', 'Documentation, https://github.com/Gronemeyer/napari-mesofield#README.md', 'Source Code, https://github.com/Gronemeyer/napari-mesofield', 'User Support, https://github.com/Gronemeyer/napari-mesofield/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",napari-mesofield.write_multiple,Save multi-layer data with MesoField,mesofield._writer:write_multiple,napari-mesofield.write_single_image,Save image data with MesoField,mesofield._writer:write_single_image,napari-mesofield.make_sample_data,Load sample data from MesoField,mesofield._sample_data:make_sample_data,napari-mesofield.make_container_widget,Container Threshold,False,napari-mesofield.make_magic_widget,Magic Threshold,False,napari-mesofield.make_function_widget,Autogenerate Threshold,True,napari-mesofield.make_qwidget,Example QWidget,False,napari-mesofield.make_container_widget,Make threshold Container widget,mesofield:ImageThreshold,napari-mesofield.write_multiple,"['image*', 'labels*']",,napari-mesofield.write_single_image,['image'],['.npy'],,napari-mesofield.make_sample_data,unique_id.1,MesoField,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-mesofield.make_magic_widget,Make threshold magic widget,mesofield:threshold_magic_widget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-mesofield.make_function_widget,Make threshold function widget,mesofield:threshold_autogenerate_widget,napari-mesofield.make_qwidget,Make example QWidget,mesofield:ExampleQWidget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +243,napari-metroid,0.0.5,napari METROID,This napari plugin creates several regions of interest of similar area over cells in a fluorescence video (2D+time). It then gets ROIs means over time and performs signal denoising: fixes photobleaching and separates signal from noise by means of blind source separation (with or without wavelet filtering).,Marcelo Leomil Zoccoler,BSD-3-Clause,https://github.com/zoccoler/napari-metroid,62ff49dac954963b869013ee,['conda'],,https://github.com/zoccoler/napari-metroid,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-metroid,http://api.anaconda.org/packages/conda-forge/napari-metroid,http://anaconda.org/conda-forge/napari-metroid,['0.0.5'],0.0.5,0.0.5,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.5,conda-forge/napari-metroid/0.0.5,1.0,0.0,2022-08-19 08:29:09.950000+00:00,2023-06-18 08:42:20.974000+00:00,conda,noarch/napari-metroid-0.0.5-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['matplotlib-base', 'napari-skimage-regionprops >=0.3.1', 'numpy', 'python >=3.7', 'scikit-image', 'scikit-learn', 'scipy', 'statsmodels']",noarch,1660897604740.0,None-any-None,pyhd8ed1ab_0,2022-08-19 08:29:10.449000+00:00,0c44764145c01330438489c54c217758,None,451721.0,conda-forge/napari-metroid/0.0.5/noarch/napari-metroid-0.0.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-metroid/0.0.5/noarch/napari-metroid-0.0.5-pyhd8ed1ab_0.tar.bz2,conda,0.0.5,conda-forge,['main'],public,,0.2.1,napari-metroid.write_multiple,Save multi-layer data with napari METROID,napari_metroid._writer:write_multiple,,,,2.1,napari-metroid,0.0.5,['UNKNOWN'],This napari plugin creates several regions of interest of similar area over cells in a fluorescence video (2D+time). It then gets ROIs means over time and performs signal denoising: fixes photobleaching and separates signal from noise by means of blind source separation (with or without wavelet filtering).,"# napari-metroid [![License](https://img.shields.io/pypi/l/napari-metroid.svg?color=green)](https://github.com/zoccoler/napari-metroid/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-metroid.svg?color=green)](https://pypi.org/project/napari-metroid) @@ -25274,8 +26350,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/zoccoler/napari-metroid,Marcelo Leomil Zoccoler,marcelo.zoccoler@tu-dresden.de,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['numpy', 'scikit-learn', 'scikit-image', 'statsmodels', 'scipy', 'matplotlib', 'napari-skimage-regionprops (>=0.3.1)']","<3.9,>=3.7","['Bug Tracker, https://github.com/zoccoler/napari-metroid/issues', 'Documentation, https://github.com/zoccoler/napari-metroid#README.md', 'Source Code, https://github.com/zoccoler/napari-metroid', 'User Support, https://github.com/zoccoler/napari-metroid/issues']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-metroid.write_single_image,Save image data with napari METROID,napari_metroid._writer:write_single_image,napari-metroid.make_cell1_AP1_data,Load sample data Cell 1 Video Action Potential from napari METROID,napari_metroid._sample_data:make_cell1_AP1_data,napari-metroid.make_cell1_EP1_data,Load sample data Cell 1 Video Electroporation from napari METROID,napari_metroid._sample_data:make_cell1_EP1_data,napari-metroid.make_qwidget,Main Interface,False,,,,,,,,,,napari-metroid.make_qwidget,Make example QWidget,napari_metroid._dock_widget:MainInterface,napari-metroid.write_multiple,"['image*', 'labels*']",,napari-metroid.write_single_image,['image'],['.npy'],,napari-metroid.make_cell1_AP1_data,AP,Cell1 Video_Action_Potential,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-metroid.make_cell1_EP1_data,EP,Cell1 Video_Electroporation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -233,napari-micromanager,0.1.3,napari-micromanager,Micro-Manager GUI interface in napari.,,BSD 3-Clause License,,620a21b846456342397af511,['conda'],,https://github.com/tlambert03/napari-micromanager,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-micromanager,http://api.anaconda.org/packages/conda-forge/napari-micromanager,http://anaconda.org/conda-forge/napari-micromanager,"['0.0.1rc5', '0.0.1rc7', '0.0.3']",0.0.3,0.0.3,['noarch'],7.0,,['pyhd8ed1ab_0'],0.0.1rc5,conda-forge/napari-micromanager/0.0.1rc5,1.0,0.0,2022-02-14 09:32:38.601000+00:00,2023-10-17 15:28:29.046000+00:00,conda,noarch/napari-micromanager-0.0.1rc5-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui >=0.3.0', 'napari', 'pymmcore-plus >=0.1.5', 'python >=3.8', 'scikit-image', 'tqdm', 'useq-schema >=0.1.0']",noarch,1644830935696.0,None-any-None,pyhd8ed1ab_0,2022-02-14 09:32:38.873000+00:00,d9cb6aa7d205d31a6608f14ce201edcc,None,88622.0,conda-forge/napari-micromanager/0.0.1rc5/noarch/napari-micromanager-0.0.1rc5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-micromanager/0.0.1rc5/noarch/napari-micromanager-0.0.1rc5-pyhd8ed1ab_0.tar.bz2,conda,0.0.1rc5,conda-forge,['main'],public,,0.1.0,napari-micromanager.MainWindow,Create Main Window,napari_micromanager.main_window:MainWindow,,,,2.3,napari-micromanager,0.1.3,,Micro-Manager GUI interface in napari.,"# napari-micromanager +",text/markdown,https://github.com/zoccoler/napari-metroid,Marcelo Leomil Zoccoler,marcelo.zoccoler@tu-dresden.de,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['numpy', 'scikit-learn', 'scikit-image', 'statsmodels', 'scipy', 'matplotlib', 'napari-skimage-regionprops (>=0.3.1)']","<3.9,>=3.7","['Bug Tracker, https://github.com/zoccoler/napari-metroid/issues', 'Documentation, https://github.com/zoccoler/napari-metroid#README.md', 'Source Code, https://github.com/zoccoler/napari-metroid', 'User Support, https://github.com/zoccoler/napari-metroid/issues']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-metroid.write_single_image,Save image data with napari METROID,napari_metroid._writer:write_single_image,napari-metroid.make_cell1_AP1_data,Load sample data Cell 1 Video Action Potential from napari METROID,napari_metroid._sample_data:make_cell1_AP1_data,napari-metroid.make_cell1_EP1_data,Load sample data Cell 1 Video Electroporation from napari METROID,napari_metroid._sample_data:make_cell1_EP1_data,napari-metroid.make_qwidget,Main Interface,False,,,,,,,,,,napari-metroid.make_qwidget,Make example QWidget,napari_metroid._dock_widget:MainInterface,napari-metroid.write_multiple,"['image*', 'labels*']",,napari-metroid.write_single_image,['image'],['.npy'],,napari-metroid.make_cell1_AP1_data,AP,Cell1 Video_Action_Potential,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-metroid.make_cell1_EP1_data,EP,Cell1 Video_Electroporation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +244,napari-micromanager,0.1.3,napari-micromanager,Micro-Manager GUI interface in napari.,,BSD 3-Clause License,,620a21b846456342397af511,['conda'],,https://github.com/tlambert03/napari-micromanager,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-micromanager,http://api.anaconda.org/packages/conda-forge/napari-micromanager,http://anaconda.org/conda-forge/napari-micromanager,"['0.0.1rc5', '0.0.1rc7', '0.0.3']",0.0.3,0.0.3,['noarch'],7.0,,['pyhd8ed1ab_0'],0.0.1rc5,conda-forge/napari-micromanager/0.0.1rc5,1.0,0.0,2022-02-14 09:32:38.601000+00:00,2023-10-17 15:28:29.046000+00:00,conda,noarch/napari-micromanager-0.0.1rc5-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui >=0.3.0', 'napari', 'pymmcore-plus >=0.1.5', 'python >=3.8', 'scikit-image', 'tqdm', 'useq-schema >=0.1.0']",noarch,1644830935696.0,None-any-None,pyhd8ed1ab_0,2022-02-14 09:32:38.873000+00:00,d9cb6aa7d205d31a6608f14ce201edcc,None,88622.0,conda-forge/napari-micromanager/0.0.1rc5/noarch/napari-micromanager-0.0.1rc5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-micromanager/0.0.1rc5/noarch/napari-micromanager-0.0.1rc5-pyhd8ed1ab_0.tar.bz2,conda,0.0.1rc5,conda-forge,['main'],public,,0.1.0,napari-micromanager.MainWindow,Create Main Window,napari_micromanager.main_window:MainWindow,,,,2.3,napari-micromanager,0.1.3,,Micro-Manager GUI interface in napari.,"# napari-micromanager [![License](https://img.shields.io/pypi/l/napari-micromanager.svg?color=green)](https://github.com/napari/napari-micromanager/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-micromanager.svg?color=green)](https://pypi.org/project/napari-micromanager) @@ -25353,8 +26429,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [BSD-3]: http://opensource.org/licenses/BSD-3-Clause [file an issue]: https://github.com/pymmcore-plus/napari-micromanager/issues [pip]: https://pypi.org/project/pip/ -",text/markdown,,,"Federico Gasparoli , Talley Lambert ",BSD 3-Clause License,"['Development Status :: 3 - Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: System :: Hardware', 'Topic :: System :: Hardware :: Hardware Drivers', 'Topic :: Utilities']","['fonticon-materialdesignicons6', 'napari>=0.4.13', 'pymmcore-plus>=0.9.3', 'pymmcore-widgets>=0.7.0rc1', 'superqt>=0.5.1', 'tifffile', 'useq-schema>=0.4.1', 'zarr', ""mda-simulator; extra == 'dev'"", ""mypy; extra == 'dev'"", ""pre-commit; extra == 'dev'"", ""ruff; extra == 'dev'"", ""mkdocs-material; extra == 'docs'"", ""mkdocstrings-python; extra == 'docs'"", ""pyqt5; extra == 'pyqt5'"", ""pyqt6; extra == 'pyqt6'"", ""pyside2; extra == 'pyside2'"", ""pyside6; extra == 'pyside6'"", ""pytest; extra == 'test'"", ""pytest-cov; extra == 'test'"", ""pytest-qt; extra == 'test'""]",>=3.9,"['Source, https://github.com/pymmcore-plus/napari-micromanager', 'Tracker, https://github.com/pymmcore-plus/napari-micromanager/issues']","['dev', 'docs', 'pyqt5', 'pyqt6', 'pyside2', 'pyside6', 'test']",False,0.0.1rc7,conda-forge/napari-micromanager/0.0.1rc7,0.0.3,conda-forge/napari-micromanager/0.0.3,,,conda,noarch/napari-micromanager-0.0.1rc7-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['fonticon-materialdesignicons6', 'magicgui >=0.3.0', 'napari', 'pymmcore-plus >=0.1.5', 'python >=3.8', 'scikit-image', 'tqdm', 'useq-schema >=0.1.0']",pyhd8ed1ab_0,1653069268518.0,None-any-None,noarch,2022-05-20 17:57:01.630000+00:00,3a02db73a4bbb5f9a77b8e63dd33b3e3,None,96032.0,conda-forge/napari-micromanager/0.0.1rc7/noarch/napari-micromanager-0.0.1rc7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-micromanager/0.0.1rc7/noarch/napari-micromanager-0.0.1rc7-pyhd8ed1ab_0.tar.bz2,conda,0.0.1rc7,conda-forge,['main'],conda,noarch/napari-micromanager-0.0.3-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,True,python,"['fonticon-materialdesignicons6', 'napari >=0.4.13', 'numpy', 'pymmcore-plus >=0.8.0', 'pymmcore-widgets >=0.5.3', 'python >=3.8', 'qtpy', 'superqt >=0.5.1', 'tifffile', 'useq-schema >=0.4.1', 'zarr']",noarch,1697556372106.0,None-any-None,pyhd8ed1ab_0,2023-10-17 15:28:27.103000+00:00,de0bf41b9e5981893b2f3ebc8ee11671,9e5e2c127f8a20b3d59c456906681ca5ea20ba60c6dbfd90535b40a95ea6f686,26046.0,conda-forge/napari-micromanager/0.0.3/noarch/napari-micromanager-0.0.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-micromanager/0.0.3/noarch/napari-micromanager-0.0.3-pyhd8ed1ab_0.conda,conda,0.0.3,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-micromanager.MainWindow,Main Window,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -234,napari-microscope,0.0.3,napari-microscope,Napari plugin for Microscope.,David Miguel Susano Pinto,GPL-3.0-or-later,,621629b56526fc1f99ef1437,['conda'],,https://pypi.org/project/napari-microscope/,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-microscope,http://api.anaconda.org/packages/conda-forge/napari-microscope,http://anaconda.org/conda-forge/napari-microscope,['0.0.3'],0.0.3,0.0.3,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.3,conda-forge/napari-microscope/0.0.3,1.0,0.0,2022-02-23 12:33:54.813000+00:00,2023-06-18 08:40:55.478000+00:00,conda,noarch/napari-microscope-0.0.3-pyhd8ed1ab_0.tar.bz2,0.0,GPL-3.0-or-later,False,python,"['microscope', 'napari-plugin-engine', 'pyro4', 'python >=3.6']",noarch,1645619547234.0,None-any-None,pyhd8ed1ab_0,2022-02-23 12:33:55.496000+00:00,d7b9d4529865cc5e3d70a453c6b7dd4b,None,22062.0,conda-forge/napari-microscope/0.0.3/noarch/napari-microscope-0.0.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-microscope/0.0.3/noarch/napari-microscope-0.0.3-pyhd8ed1ab_0.tar.bz2,conda,0.0.3,conda-forge,['main'],public,,0.2.1,napari-microscope.MicroscopeWidget,MicroscopeWidget,napari_microscope:MicroscopeWidget,,,,2.1,napari-microscope,0.0.3,,Napari plugin for Microscope.,"Microscope control plugin for Napari via Python Microscope. +",text/markdown,,,"Federico Gasparoli , Talley Lambert ",BSD 3-Clause License,"['Development Status :: 3 - Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: System :: Hardware', 'Topic :: System :: Hardware :: Hardware Drivers', 'Topic :: Utilities']","['fonticon-materialdesignicons6', 'napari>=0.4.13', 'pymmcore-plus>=0.9.3', 'pymmcore-widgets>=0.7.0rc1', 'superqt>=0.5.1', 'tifffile', 'useq-schema>=0.4.1', 'zarr', ""mda-simulator; extra == 'dev'"", ""mypy; extra == 'dev'"", ""pre-commit; extra == 'dev'"", ""ruff; extra == 'dev'"", ""mkdocs-material; extra == 'docs'"", ""mkdocstrings-python; extra == 'docs'"", ""pyqt5; extra == 'pyqt5'"", ""pyqt6; extra == 'pyqt6'"", ""pyside2; extra == 'pyside2'"", ""pyside6; extra == 'pyside6'"", ""pytest; extra == 'test'"", ""pytest-cov; extra == 'test'"", ""pytest-qt; extra == 'test'""]",>=3.9,"['Source, https://github.com/pymmcore-plus/napari-micromanager', 'Tracker, https://github.com/pymmcore-plus/napari-micromanager/issues']","['dev', 'docs', 'pyqt5', 'pyqt6', 'pyside2', 'pyside6', 'test']",False,0.0.1rc7,conda-forge/napari-micromanager/0.0.1rc7,0.0.3,conda-forge/napari-micromanager/0.0.3,,,conda,noarch/napari-micromanager-0.0.1rc7-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['fonticon-materialdesignicons6', 'magicgui >=0.3.0', 'napari', 'pymmcore-plus >=0.1.5', 'python >=3.8', 'scikit-image', 'tqdm', 'useq-schema >=0.1.0']",pyhd8ed1ab_0,1653069268518.0,None-any-None,noarch,2022-05-20 17:57:01.630000+00:00,3a02db73a4bbb5f9a77b8e63dd33b3e3,None,96032.0,conda-forge/napari-micromanager/0.0.1rc7/noarch/napari-micromanager-0.0.1rc7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-micromanager/0.0.1rc7/noarch/napari-micromanager-0.0.1rc7-pyhd8ed1ab_0.tar.bz2,conda,0.0.1rc7,conda-forge,['main'],conda,noarch/napari-micromanager-0.0.3-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,True,python,"['fonticon-materialdesignicons6', 'napari >=0.4.13', 'numpy', 'pymmcore-plus >=0.8.0', 'pymmcore-widgets >=0.5.3', 'python >=3.8', 'qtpy', 'superqt >=0.5.1', 'tifffile', 'useq-schema >=0.4.1', 'zarr']",noarch,1697556372106.0,None-any-None,pyhd8ed1ab_0,2023-10-17 15:28:27.103000+00:00,de0bf41b9e5981893b2f3ebc8ee11671,9e5e2c127f8a20b3d59c456906681ca5ea20ba60c6dbfd90535b40a95ea6f686,26046.0,conda-forge/napari-micromanager/0.0.3/noarch/napari-micromanager-0.0.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-micromanager/0.0.3/noarch/napari-micromanager-0.0.3-pyhd8ed1ab_0.conda,conda,0.0.3,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-micromanager.MainWindow,Main Window,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +245,napari-microscope,0.0.3,napari-microscope,Napari plugin for Microscope.,David Miguel Susano Pinto,GPL-3.0-or-later,,621629b56526fc1f99ef1437,['conda'],,https://pypi.org/project/napari-microscope/,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-microscope,http://api.anaconda.org/packages/conda-forge/napari-microscope,http://anaconda.org/conda-forge/napari-microscope,['0.0.3'],0.0.3,0.0.3,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.3,conda-forge/napari-microscope/0.0.3,1.0,0.0,2022-02-23 12:33:54.813000+00:00,2023-06-18 08:40:55.478000+00:00,conda,noarch/napari-microscope-0.0.3-pyhd8ed1ab_0.tar.bz2,0.0,GPL-3.0-or-later,False,python,"['microscope', 'napari-plugin-engine', 'pyro4', 'python >=3.6']",noarch,1645619547234.0,None-any-None,pyhd8ed1ab_0,2022-02-23 12:33:55.496000+00:00,d7b9d4529865cc5e3d70a453c6b7dd4b,None,22062.0,conda-forge/napari-microscope/0.0.3/noarch/napari-microscope-0.0.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-microscope/0.0.3/noarch/napari-microscope-0.0.3-pyhd8ed1ab_0.tar.bz2,conda,0.0.3,conda-forge,['main'],public,,0.2.1,napari-microscope.MicroscopeWidget,MicroscopeWidget,napari_microscope:MicroscopeWidget,,,,2.1,napari-microscope,0.0.3,,Napari plugin for Microscope.,"Microscope control plugin for Napari via Python Microscope. Current development stage is whatever comes before alpha and ""proof of concept"". @@ -25450,8 +26526,8 @@ Changing the filterwheel changes which channel from the image is returned. Changing the stage coordinates changes the image that is returned (but beware of the corners, pixels outside the image size are not handled yet and will give an error). -",,,David Miguel Susano Pinto,david.pinto@bioch.ox.ac.uk,GPL-3.0-or-later,"['Development Status :: 3 - Alpha', 'Environment :: Plugins', 'Framework :: napari ', 'Intended Audience :: Science/Research', 'Operating System :: OS Independent', 'Topic :: Scientific/Engineering']","['Pyro4', 'microscope', 'napari-plugin-engine']",>=3.6,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-microscope.MicroscopeWidget,MicroscopeWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -235,napari-microtubule-analyzer,0.0.1a7,Microtubule Analyzer,A plugin to analyze microtubule organization,Daniel Krentzel,MIT,https://github.com/krentzd/napari-microtubule-analyzer,6559373bafcdfe797c2b01d1,['conda'],,https://pypi.org/project/napari-microtubule-analyzer,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-microtubule-analyzer,http://api.anaconda.org/packages/conda-forge/napari-microtubule-analyzer,http://anaconda.org/conda-forge/napari-microtubule-analyzer,"['0.0.1a3', '0.0.1a7']",0.0.1a7,0.0.1a7,['noarch'],5.0,https://github.com/krentzd/napari-microtubule-analyzer,['pyh9208f05_0'],0.0.1a3,conda-forge/napari-microtubule-analyzer/0.0.1a3,1.0,0.0,2023-11-18 22:14:16.968000+00:00,2023-11-22 23:37:17.271000+00:00,conda,noarch/napari-microtubule-analyzer-0.0.1a3-pyh9208f05_0.conda,0.0,MIT,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'opencv', 'packaging', 'pyefd', 'pyqtgraph', 'python >=3.8', 'qtpy', 'scikit-image', 'scipy', 'setuptools', 'tifffile', 'tqdm']",noarch,1700345477767.0,None-any-None,pyh9208f05_0,2023-11-18 22:14:17.323000+00:00,e01cef1ebf5226aab49d735b6994ca76,74cd33c0279276f998df0e8a17d9b2314a8f083e2a6f62db45996d23c4dd6c7f,34127.0,conda-forge/napari-microtubule-analyzer/0.0.1a3/noarch/napari-microtubule-analyzer-0.0.1a3-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-microtubule-analyzer/0.0.1a3/noarch/napari-microtubule-analyzer-0.0.1a3-pyh9208f05_0.conda,conda,0.0.1a3,conda-forge,['main'],public,,0.2.1,napari-microtubule-analyzer.get_reader,Open data with Microtubule Analyzer,napari_microtubule_analyzer._reader:napari_get_reader,napari-microtubule-analyzer.get_reader,"['*.tif', '*.tiff']",True,2.1,napari-microtubule-analyzer,0.0.1a7,,A plugin to analyze microtubule organization,"# napari-microtubule-analyzer +",,,David Miguel Susano Pinto,david.pinto@bioch.ox.ac.uk,GPL-3.0-or-later,"['Development Status :: 3 - Alpha', 'Environment :: Plugins', 'Framework :: napari ', 'Intended Audience :: Science/Research', 'Operating System :: OS Independent', 'Topic :: Scientific/Engineering']","['Pyro4', 'microscope', 'napari_plugin_engine']",>=3.6,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-microscope.MicroscopeWidget,MicroscopeWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +246,napari-microtubule-analyzer,0.0.1a7,Microtubule Analyzer,A plugin to analyze microtubule organization,Daniel Krentzel,MIT,https://github.com/krentzd/napari-microtubule-analyzer,6559373bafcdfe797c2b01d1,['conda'],,https://pypi.org/project/napari-microtubule-analyzer,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-microtubule-analyzer,http://api.anaconda.org/packages/conda-forge/napari-microtubule-analyzer,http://anaconda.org/conda-forge/napari-microtubule-analyzer,"['0.0.1a3', '0.0.1a7']",0.0.1a7,0.0.1a7,['noarch'],5.0,https://github.com/krentzd/napari-microtubule-analyzer,['pyh9208f05_0'],0.0.1a3,conda-forge/napari-microtubule-analyzer/0.0.1a3,1.0,0.0,2023-11-18 22:14:16.968000+00:00,2023-11-22 23:37:17.271000+00:00,conda,noarch/napari-microtubule-analyzer-0.0.1a3-pyh9208f05_0.conda,0.0,MIT,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'opencv', 'packaging', 'pyefd', 'pyqtgraph', 'python >=3.8', 'qtpy', 'scikit-image', 'scipy', 'setuptools', 'tifffile', 'tqdm']",noarch,1700345477767.0,None-any-None,pyh9208f05_0,2023-11-18 22:14:17.323000+00:00,e01cef1ebf5226aab49d735b6994ca76,74cd33c0279276f998df0e8a17d9b2314a8f083e2a6f62db45996d23c4dd6c7f,34127.0,conda-forge/napari-microtubule-analyzer/0.0.1a3/noarch/napari-microtubule-analyzer-0.0.1a3-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-microtubule-analyzer/0.0.1a3/noarch/napari-microtubule-analyzer-0.0.1a3-pyh9208f05_0.conda,conda,0.0.1a3,conda-forge,['main'],public,,0.2.1,napari-microtubule-analyzer.get_reader,Open data with Microtubule Analyzer,napari_microtubule_analyzer._reader:napari_get_reader,napari-microtubule-analyzer.get_reader,"['*.tif', '*.tiff']",True,2.1,napari-microtubule-analyzer,0.0.1a7,,A plugin to analyze microtubule organization,"# napari-microtubule-analyzer [![License MIT](https://img.shields.io/pypi/l/napari-microtubule-analyzer.svg?color=green)](https://github.com/krentzd/napari-microtubule-analyzer/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-microtubule-analyzer.svg?color=green)](https://pypi.org/project/napari-microtubule-analyzer) @@ -25518,8 +26594,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/krentzd/napari-microtubule-analyzer,Daniel Krentzel,dkrentzel@pm.me,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['setuptools', 'packaging', 'numpy', 'magicgui', 'qtpy', 'opencv-python', 'matplotlib', 'scikit-image', 'tqdm', 'tifffile', 'scipy', 'pyefd', 'pyqtgraph', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.8,"['Bug Tracker, https://github.com/krentzd/napari-microtubule-analyzer/issues', 'Documentation, https://github.com/krentzd/napari-microtubule-analyzer#README.md', 'Source Code, https://github.com/krentzd/napari-microtubule-analyzer', 'User Support, https://github.com/krentzd/napari-microtubule-analyzer/issues']",['testing'],False,0.0.1a7,conda-forge/napari-microtubule-analyzer/0.0.1a7,,,,,conda,noarch/napari-microtubule-analyzer-0.0.1a7-pyh9208f05_0.conda,0.0,MIT,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'opencv', 'packaging', 'pyefd', 'pyqtgraph', 'python >=3.8', 'qtpy', 'scikit-image', 'scipy', 'setuptools', 'tifffile', 'tqdm']",pyh9208f05_0,1700696116518.0,None-any-None,noarch,2023-11-22 23:37:15.465000+00:00,c24d27c6bb23bfe13a58a5e17553c20c,1f0ec2cb3d65661bee7e5bb1a87016d752cbc542c5bf653d0df002af46126ab2,35807.0,conda-forge/napari-microtubule-analyzer/0.0.1a7/noarch/napari-microtubule-analyzer-0.0.1a7-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-microtubule-analyzer/0.0.1a7/noarch/napari-microtubule-analyzer-0.0.1a7-pyh9208f05_0.conda,conda,0.0.1a7,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-microtubule-analyzer.degree_of_radiality,Make DoR widget,napari_microtubule_analyzer._widget:RadialityPlotter,napari-microtubule-analyzer.sample_data,siAPC,napari_microtubule_analyzer.sample_data:make_sample_data,,,,napari-microtubule-analyzer.degree_of_radiality,Microtubule Analyzer,False,,,,,,,,,,,,,,,,,,,,napari-microtubule-analyzer.sample_data,sample_siRNA.1,Sample siRNA data,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -236,napari-mm3,0.0.16,napari-mm3,a plugin for mother machine image analysis,"Gursharan Ahir, Michael Sandler, Ryan Thiermann",BSD-3-Clause,https://github.com/junlabucsd/napari-mm3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.1.0,napari-mm3.TIFFConverter,Converts an nd2 (or other bioformats supported filetype) file to TIFFs.,napari_mm3._tiff_converter:TIFFExport,,,,2.1,napari-mm3,0.0.16,,a plugin for mother machine image analysis,"# napari-mm3 +",text/markdown,https://github.com/krentzd/napari-microtubule-analyzer,Daniel Krentzel,dkrentzel@pm.me,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['setuptools', 'packaging', 'numpy', 'magicgui', 'qtpy', 'opencv-python', 'matplotlib', 'scikit-image', 'tqdm', 'tifffile', 'scipy', 'pyefd', 'pyqtgraph', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.8,"['Bug Tracker, https://github.com/krentzd/napari-microtubule-analyzer/issues', 'Documentation, https://github.com/krentzd/napari-microtubule-analyzer#README.md', 'Source Code, https://github.com/krentzd/napari-microtubule-analyzer', 'User Support, https://github.com/krentzd/napari-microtubule-analyzer/issues']",['testing'],False,0.0.1a7,conda-forge/napari-microtubule-analyzer/0.0.1a7,,,,,conda,noarch/napari-microtubule-analyzer-0.0.1a7-pyh9208f05_0.conda,0.0,MIT,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'opencv', 'packaging', 'pyefd', 'pyqtgraph', 'python >=3.8', 'qtpy', 'scikit-image', 'scipy', 'setuptools', 'tifffile', 'tqdm']",pyh9208f05_0,1700696116518.0,None-any-None,noarch,2023-11-22 23:37:15.465000+00:00,c24d27c6bb23bfe13a58a5e17553c20c,1f0ec2cb3d65661bee7e5bb1a87016d752cbc542c5bf653d0df002af46126ab2,35807.0,conda-forge/napari-microtubule-analyzer/0.0.1a7/noarch/napari-microtubule-analyzer-0.0.1a7-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-microtubule-analyzer/0.0.1a7/noarch/napari-microtubule-analyzer-0.0.1a7-pyh9208f05_0.conda,conda,0.0.1a7,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-microtubule-analyzer.degree_of_radiality,Make DoR widget,napari_microtubule_analyzer._widget:RadialityPlotter,napari-microtubule-analyzer.sample_data,siAPC,napari_microtubule_analyzer.sample_data:make_sample_data,,,,napari-microtubule-analyzer.degree_of_radiality,Microtubule Analyzer,False,,,,,,,,,,,,,,,,,,,,napari-microtubule-analyzer.sample_data,sample_siRNA.1,Sample siRNA data,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +247,napari-mm3,0.0.16,napari-mm3,a plugin for mother machine image analysis,"Gursharan Ahir, Michael Sandler, Ryan Thiermann",BSD-3-Clause,https://github.com/junlabucsd/napari-mm3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.1.0,napari-mm3.TIFFConverter,Converts an nd2 (or other bioformats supported filetype) file to TIFFs.,napari_mm3._tiff_converter:TIFFExport,,,,2.1,napari-mm3,0.0.16,,a plugin for mother machine image analysis,"# napari-mm3 [![License](https://img.shields.io/pypi/l/napari-mm3.svg?color=green)](https://github.com/junlabucsd/napari-mm3/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-mm3.svg?color=green)](https://pypi.org/project/napari-mm3) @@ -25671,8 +26747,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/junlabucsd/napari-mm3,"Gursharan Ahir, Michael Sandler, Ryan Thiermann",ryan.thiermann@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine >=0.1.4', 'numpy', 'h5py', 'tifffile ==2021.11.2', 'scikit-learn', 'scikit-image', 'tensorflow', 'nd2reader', 'seaborn', 'elasticdeform']",>=3.9,"['Bug Tracker, https://github.com/junlabucsd/napari-mm3/issues', 'Documentation, https://github.com/junlabucsd/napari-mm3#README.md', 'Source Code, https://github.com/junlabucsd/napari-mm3', 'User Support, https://github.com/junlabucsd/napari-mm3/issues']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-mm3.Compile,Performs Mother Machine Analysis,napari_mm3._compile:Compile,napari-mm3.Subtract,Performs Mother Machine Analysis,napari_mm3._subtract:Subtract,napari-mm3.SegmentOtsu,Performs Mother Machine Analysis,napari_mm3._segment_otsu:SegmentOtsu,napari-mm3.TIFFConverter,TIFFConverter,False,napari-mm3.Compile,Compile,False,napari-mm3.ChannelPicker,PickChannels,False,napari-mm3.Subtract,Subtract,False,napari-mm3.SegmentUnet,Performs Mother Machine Analysis,napari_mm3._segment_unet:SegmentUnet,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-mm3.Track,Performs Mother Machine Analysis,napari_mm3._track:Track,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-mm3.Annotate,Annotate training data,napari_mm3._annotate:Annotate,napari-mm3.TrainUnet,Train U-net model,napari_mm3._train_unet:TrainUnet,napari-mm3.ChannelPicker,Sort channels,napari_mm3._channel_picker:ChannelPicker,napari-mm3.Colors,Analyze fluorescence images,napari_mm3._colors:Colors,napari-mm3.Foci,Detect and track foci,napari_mm3._foci:Foci,napari-mm3.FociPicking,Foci picking,napari_mm3._foci_picking:FociPicking,,napari-mm3.SegmentOtsu,SegmentOtsu,False,napari-mm3.SegmentUnet,SegmentUnet,False,napari-mm3.Track,Track,False,napari-mm3.Annotate,Annotate,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -237,napari-molecule-reader,0.1.2,napari molecule reader,A napari plugin that read molecular structure files.,Lorenzo Gaifas,BSD-3-Clause,https://github.com/brisvag/napari-molecule-reader,61f857d3a3c32938bd84768a,['conda'],,https://github.com/brisvag/napari-molecule-reader,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-molecule-reader,http://api.anaconda.org/packages/conda-forge/napari-molecule-reader,http://anaconda.org/conda-forge/napari-molecule-reader,"['0.1.1', '0.1.2']",0.1.2,0.1.2,['noarch'],4.0,,['pyhd8ed1ab_0'],0.1.1,conda-forge/napari-molecule-reader/0.1.1,1.0,0.0,2022-01-31 21:42:41.310000+00:00,2023-06-18 08:40:40.561000+00:00,conda,noarch/napari-molecule-reader-0.1.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['atomium', 'numpy', 'pandas', 'python >=3.7', 'scipy']",noarch,1643665303282.0,None-any-None,pyhd8ed1ab_0,2022-01-31 21:42:41.577000+00:00,9f1a35200016a3a31c74cf5395e0f6ac,None,12387.0,conda-forge/napari-molecule-reader/0.1.1/noarch/napari-molecule-reader-0.1.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-molecule-reader/0.1.1/noarch/napari-molecule-reader-0.1.1-pyhd8ed1ab_0.tar.bz2,conda,0.1.1,conda-forge,['main'],public,,0.2.1,napari-molecule-reader.get_reader,Open data with napari molecule reader,napari_molecule_reader._reader:get_reader,napari-molecule-reader.get_reader,"['*.pdb', '*.cif']",False,2.1,napari-molecule-reader,0.1.2,['UNKNOWN'],A napari plugin that read molecular structure files.,"# napari-molecule-reader +",text/markdown,https://github.com/junlabucsd/napari-mm3,"Gursharan Ahir, Michael Sandler, Ryan Thiermann",ryan.thiermann@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine >=0.1.4', 'numpy', 'h5py', 'tifffile ==2021.11.2', 'scikit-learn', 'scikit-image', 'tensorflow', 'nd2reader', 'seaborn', 'elasticdeform']",>=3.9,"['Bug Tracker, https://github.com/junlabucsd/napari-mm3/issues', 'Documentation, https://github.com/junlabucsd/napari-mm3#README.md', 'Source Code, https://github.com/junlabucsd/napari-mm3', 'User Support, https://github.com/junlabucsd/napari-mm3/issues']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-mm3.Compile,Performs Mother Machine Analysis,napari_mm3._compile:Compile,napari-mm3.Subtract,Performs Mother Machine Analysis,napari_mm3._subtract:Subtract,napari-mm3.SegmentOtsu,Performs Mother Machine Analysis,napari_mm3._segment_otsu:SegmentOtsu,napari-mm3.TIFFConverter,TIFFConverter,False,napari-mm3.Compile,Compile,False,napari-mm3.ChannelPicker,PickChannels,False,napari-mm3.Subtract,Subtract,False,napari-mm3.SegmentUnet,Performs Mother Machine Analysis,napari_mm3._segment_unet:SegmentUnet,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-mm3.Track,Performs Mother Machine Analysis,napari_mm3._track:Track,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-mm3.Annotate,Annotate training data,napari_mm3._annotate:Annotate,napari-mm3.TrainUnet,Train U-net model,napari_mm3._train_unet:TrainUnet,napari-mm3.ChannelPicker,Sort channels,napari_mm3._channel_picker:ChannelPicker,napari-mm3.Colors,Analyze fluorescence images,napari_mm3._colors:Colors,napari-mm3.Foci,Detect and track foci,napari_mm3._foci:Foci,,napari-mm3.SegmentOtsu,SegmentOtsu,False,napari-mm3.SegmentUnet,SegmentUnet,False,napari-mm3.Track,Track,False,napari-mm3.Annotate,Annotate,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +248,napari-molecule-reader,0.1.2,napari molecule reader,A napari plugin that read molecular structure files.,Lorenzo Gaifas,BSD-3-Clause,https://github.com/brisvag/napari-molecule-reader,61f857d3a3c32938bd84768a,['conda'],,https://github.com/brisvag/napari-molecule-reader,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-molecule-reader,http://api.anaconda.org/packages/conda-forge/napari-molecule-reader,http://anaconda.org/conda-forge/napari-molecule-reader,"['0.1.1', '0.1.2']",0.1.2,0.1.2,['noarch'],4.0,,['pyhd8ed1ab_0'],0.1.1,conda-forge/napari-molecule-reader/0.1.1,1.0,0.0,2022-01-31 21:42:41.310000+00:00,2023-06-18 08:40:40.561000+00:00,conda,noarch/napari-molecule-reader-0.1.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['atomium', 'numpy', 'pandas', 'python >=3.7', 'scipy']",noarch,1643665303282.0,None-any-None,pyhd8ed1ab_0,2022-01-31 21:42:41.577000+00:00,9f1a35200016a3a31c74cf5395e0f6ac,None,12387.0,conda-forge/napari-molecule-reader/0.1.1/noarch/napari-molecule-reader-0.1.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-molecule-reader/0.1.1/noarch/napari-molecule-reader-0.1.1-pyhd8ed1ab_0.tar.bz2,conda,0.1.1,conda-forge,['main'],public,,0.2.1,napari-molecule-reader.get_reader,Open data with napari molecule reader,napari_molecule_reader._reader:get_reader,napari-molecule-reader.get_reader,"['*.pdb', '*.cif']",False,2.1,napari-molecule-reader,0.1.2,['UNKNOWN'],A napari plugin that read molecular structure files.,"# napari-molecule-reader [![License](https://img.shields.io/pypi/l/napari-molecule-reader.svg?color=green)](https://github.com/brisvag/napari-molecule-reader/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-molecule-reader.svg?color=green)](https://pypi.org/project/napari-molecule-reader) @@ -25746,8 +26822,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/brisvag/napari-molecule-reader,Lorenzo Gaifas,brisvag@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['numpy', 'pandas', 'scipy', 'atomium']",>=3.7,"['Bug Tracker, https://github.com/brisvag/napari-molecule-reader/issues', 'Documentation, https://github.com/brisvag/napari-molecule-reader#README.md', 'Source Code, https://github.com/brisvag/napari-molecule-reader', 'User Support, https://github.com/brisvag/napari-molecule-reader/issues']",,False,0.1.2,conda-forge/napari-molecule-reader/0.1.2,,,,,conda,noarch/napari-molecule-reader-0.1.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['atomium', 'numpy', 'pandas', 'python >=3.7', 'scipy']",pyhd8ed1ab_0,1643723061431.0,None-any-None,noarch,2022-02-01 13:45:16.615000+00:00,1a413817f28d3aecb1e9772a7e4e2a2e,None,12663.0,conda-forge/napari-molecule-reader/0.1.2/noarch/napari-molecule-reader-0.1.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-molecule-reader/0.1.2/noarch/napari-molecule-reader-0.1.2-pyhd8ed1ab_0.tar.bz2,conda,0.1.2,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -238,napari-molseeq,1.0.4,molSEEQ,A Napari plugin for extracting single molecule sequences from single/multi-channel SMLM microscopy data.,Piers Turner," +",text/markdown,https://github.com/brisvag/napari-molecule-reader,Lorenzo Gaifas,brisvag@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['numpy', 'pandas', 'scipy', 'atomium']",>=3.7,"['Bug Tracker, https://github.com/brisvag/napari-molecule-reader/issues', 'Documentation, https://github.com/brisvag/napari-molecule-reader#README.md', 'Source Code, https://github.com/brisvag/napari-molecule-reader', 'User Support, https://github.com/brisvag/napari-molecule-reader/issues']",,False,0.1.2,conda-forge/napari-molecule-reader/0.1.2,,,,,conda,noarch/napari-molecule-reader-0.1.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['atomium', 'numpy', 'pandas', 'python >=3.7', 'scipy']",pyhd8ed1ab_0,1643723061431.0,None-any-None,noarch,2022-02-01 13:45:16.615000+00:00,1a413817f28d3aecb1e9772a7e4e2a2e,None,12663.0,conda-forge/napari-molecule-reader/0.1.2/noarch/napari-molecule-reader-0.1.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-molecule-reader/0.1.2/noarch/napari-molecule-reader-0.1.2-pyhd8ed1ab_0.tar.bz2,conda,0.1.2,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +249,napari-molseeq,1.0.5,molSEEQ,A Napari plugin for extracting single molecule sequences from single/multi-channel SMLM microscopy data.,Piers Turner," The MIT License (MIT) Copyright (c) 2023 Piers Turner @@ -25769,7 +26845,7 @@ AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE. -",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-molseeq.make_qwidget,Make a QWidget,molseeq:QWidget,,,,2.1,napari-molseeq,1.0.4,,A Napari plugin for extracting single molecule sequences from single/multi-channel SMLM microscopy data.,"# napari-molSEEQ +",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-molseeq.make_qwidget,Make a QWidget,molseeq:QWidget,,,,2.1,napari-molseeq,1.0.5,,A Napari plugin for extracting single molecule sequences from single/multi-channel SMLM microscopy data.,"# napari-molSEEQ [![License MIT](https://img.shields.io/pypi/l/napari-GapSeq2.svg?color=green)](https://github.com/piedrro/napari-molseeq/blob/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-GapSeq2.svg?color=green)](https://pypi.org/project/napari-molseeq/) @@ -25787,8 +26863,6 @@ napari-molseeq traces can be analysed with TraceAnalyser: https://github.com/pie This is still undergoing development, so some features may not work as expected. -Formally known as **napari-pixseq**. - This was built by Dr Piers Turner from the Kapanidis Lab, University of Oxford. ---------------------------------- @@ -25861,8 +26935,8 @@ AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE. -","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']","['napari[all] ==0.5.0', 'numpy', 'magicgui', 'qtpy', 'scipy', 'pyqtgraph', 'picassosr', 'pandas', 'matplotlib >=3.7.0', 'opencv-python', 'tqdm', 'originpro', 'pyqt5-tools', 'trackpy', 'shapely', 'astropy', 'mat4py', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.9,"['Bug Tracker, https://github.com/piedrro/napari-molseeq/issues', 'Documentation, https://github.com/piedrro/napari-molseeq#README.md', 'Source Code, https://github.com/piedrro/napari-molseeq', 'User Support, https://github.com/piedrro/napari-molseeq/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",,,,,,,,,,napari-molseeq.make_qwidget,napari-molseeq,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -239,napari-moltrack,0.1.4,MolTrack,"A user-friendly SMLM analysis platfrom for napari, which includes single molecule localisation, tracking, and analysis features.",Piers Turner," +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']","['napari[all]==0.5.0', 'numpy', 'magicgui', 'qtpy', 'scipy', 'pyqtgraph', 'picassosr==0.7.3', 'pandas', 'matplotlib>=3.7.0', 'opencv-python', 'tqdm', 'originpro', 'pyqt5-tools', 'trackpy', 'shapely', 'astropy', 'mat4py', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.9,"['Bug Tracker, https://github.com/piedrro/napari-molseeq/issues', 'Documentation, https://github.com/piedrro/napari-molseeq#README.md', 'Source Code, https://github.com/piedrro/napari-molseeq', 'User Support, https://github.com/piedrro/napari-molseeq/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",,,,,,,,,,napari-molseeq.make_qwidget,napari-molseeq,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +250,napari-moltrack,0.1.6,MolTrack,"A user-friendly SMLM analysis platfrom for napari, which includes single molecule localisation, tracking, and analysis features.",Piers Turner," Copyright (c) 2024, Piers Turner All rights reserved. @@ -25890,7 +26964,7 @@ SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. -",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-moltrack.make_qwidget,Make moltrack QWidget,moltrack:QWidget,,,,2.1,napari-moltrack,0.1.4,,"A user-friendly SMLM analysis platfrom for napari, which includes single molecule localisation, tracking, and analysis features.","# napari-moltrack +",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-moltrack.make_qwidget,Make moltrack QWidget,moltrack:QWidget,,,,2.1,napari-moltrack,0.1.6,,"A user-friendly SMLM analysis platfrom for napari, which includes single molecule localisation, tracking, and analysis features.","# napari-moltrack [![License BSD-3](https://img.shields.io/pypi/l/napari-moltrack.svg?color=green)](https://github.com/piedrro/napari-moltrack/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-moltrack.svg?color=green)](https://pypi.org/project/napari-moltrack) @@ -26017,8 +27091,8 @@ SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. -","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']","['napari[all]==0.5.0', 'bactfit>=0.1.6', 'numpy', 'magicgui', 'qtpy', 'scipy', 'pyqtgraph', 'picassosr', 'pandas', 'matplotlib>=3.7.0', 'opencv-python', 'tqdm', 'originpro', 'pyqt5-tools', 'torch', 'cellpose>=3.0.1', 'omnipose', 'trackpy', 'shapely', 'astropy', 'mat4py', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.9,"['Bug Tracker, https://github.com/piedrro/napari-moltrack/issues', 'Documentation, https://github.com/piedrro/napari-moltrack#README.md', 'Source Code, https://github.com/piedrro/napari-moltrack', 'User Support, https://github.com/piedrro/napari-moltrack/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",,,,,,,,,,napari-moltrack.make_qwidget,MolTrack,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -240,napari-morphodynamics,0.1.2,napari-morphodynamics,Interface to run the morphodynamics package.,Guillaume Witz,BSD-3-Clause,https://github.com/guiwitz/napari-morphodynamics,657421d736102634ccda925a,['conda'],,https://pypi.org/project/napari-morphodynamics,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-morphodynamics,http://api.anaconda.org/packages/conda-forge/napari-morphodynamics,http://anaconda.org/conda-forge/napari-morphodynamics,['0.1.1'],0.1.1,0.1.1,['noarch'],3.0,https://github.com/guiwitz/napari-morphodynamics,['pyh9208f05_0'],0.1.1,conda-forge/napari-morphodynamics/0.1.1,1.0,0.0,2023-12-09 08:14:13.368000+00:00,2023-12-09 08:14:16.003000+00:00,conda,noarch/napari-morphodynamics-0.1.1-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['morphodynamics', 'napari-convpaint', 'napari-guitils', 'napari-matplotlib', 'python >=3.9']",noarch,1702109430716.0,None-any-None,pyh9208f05_0,2023-12-09 08:14:13.703000+00:00,04bb2882c5ea173b9bd60162b2d33805,2745e0c15db38f9fcf6984580627a6350ea023e8bfb8ec9b9f0a44b1fc71376a,21718.0,conda-forge/napari-morphodynamics/0.1.1/noarch/napari-morphodynamics-0.1.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-morphodynamics/0.1.1/noarch/napari-morphodynamics-0.1.1-pyh9208f05_0.conda,conda,0.1.1,conda-forge,['main'],public,,0.2.1,napari-morphodynamics.make_qwidget,Make MorphoWidget,napari_morphodynamics.napari_gui:MorphoWidget,,,,2.1,napari-morphodynamics,0.1.2,,Interface to run the morphodynamics package.,"# napari-morphodynamics +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']","['napari[all]==0.5.0', 'bactfit>=0.1.6', 'numpy', 'magicgui', 'qtpy', 'scipy', 'pyqtgraph', 'picassosr==0.7.3', 'pandas', 'matplotlib>=3.7.0', 'opencv-python', 'tqdm', 'originpro', 'pyqt5-tools', 'torch', 'torchvision', 'cellpose==3.0.1', 'omnipose', 'trackpy', 'shapely', 'astropy', 'mat4py', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.9,"['Bug Tracker, https://github.com/piedrro/napari-moltrack/issues', 'Documentation, https://github.com/piedrro/napari-moltrack#README.md', 'Source Code, https://github.com/piedrro/napari-moltrack', 'User Support, https://github.com/piedrro/napari-moltrack/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",,,,,,,,,,napari-moltrack.make_qwidget,MolTrack,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +251,napari-morphodynamics,0.1.2,napari-morphodynamics,Interface to run the morphodynamics package.,Guillaume Witz,BSD-3-Clause,https://github.com/guiwitz/napari-morphodynamics,657421d736102634ccda925a,['conda'],,https://pypi.org/project/napari-morphodynamics,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-morphodynamics,http://api.anaconda.org/packages/conda-forge/napari-morphodynamics,http://anaconda.org/conda-forge/napari-morphodynamics,['0.1.1'],0.1.1,0.1.1,['noarch'],3.0,https://github.com/guiwitz/napari-morphodynamics,['pyh9208f05_0'],0.1.1,conda-forge/napari-morphodynamics/0.1.1,1.0,0.0,2023-12-09 08:14:13.368000+00:00,2023-12-09 08:14:16.003000+00:00,conda,noarch/napari-morphodynamics-0.1.1-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['morphodynamics', 'napari-convpaint', 'napari-guitils', 'napari-matplotlib', 'python >=3.9']",noarch,1702109430716.0,None-any-None,pyh9208f05_0,2023-12-09 08:14:13.703000+00:00,04bb2882c5ea173b9bd60162b2d33805,2745e0c15db38f9fcf6984580627a6350ea023e8bfb8ec9b9f0a44b1fc71376a,21718.0,conda-forge/napari-morphodynamics/0.1.1/noarch/napari-morphodynamics-0.1.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-morphodynamics/0.1.1/noarch/napari-morphodynamics-0.1.1-pyh9208f05_0.conda,conda,0.1.1,conda-forge,['main'],public,,0.2.1,napari-morphodynamics.make_qwidget,Make MorphoWidget,napari_morphodynamics.napari_gui:MorphoWidget,,,,2.1,napari-morphodynamics,0.1.2,,Interface to run the morphodynamics package.,"# napari-morphodynamics [![License](https://img.shields.io/pypi/l/napari-morphodynamics.svg?color=green)](https://github.com/guiwitz/napari-morphodynamics/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-morphodynamics.svg?color=green)](https://pypi.org/project/napari-morphodynamics) @@ -26074,8 +27148,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/guiwitz/napari-morphodynamics,Guillaume Witz,guillaume.witz@unibe.ch,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['morphodynamics', 'napari-convpaint', 'napari-guitils', 'napari-matplotlib', ""cellpose ; extra == 'cellpose'""]",>=3.9,"['Bug Tracker, https://github.com/guiwitz/napari-morphodynamics/issues', 'Documentation, https://github.com/guiwitz/napari-morphodynamics#README.md', 'Source Code, https://github.com/guiwitz/napari-morphodynamics', 'User Support, https://github.com/guiwitz/napari-morphodynamics/issues']",['cellpose'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-morphodynamics.make_qwidget,MorphoWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -241,napari-mouse-controls,0.1.3,napari-mouse-controls,Control napari using a touch screen,Robert Haase,BSD-3-Clause,https://github.com/haesleinhuepf/napari-mouse-controls,61fd216d6526fc1f99644f8a,['conda'],,https://github.com/haesleinhuepf/napari-mouse-controls,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-mouse-controls,http://api.anaconda.org/packages/conda-forge/napari-mouse-controls,http://anaconda.org/conda-forge/napari-mouse-controls,['0.1.3'],0.1.3,0.1.3,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.3,conda-forge/napari-mouse-controls/0.1.3,1.0,0.0,2022-02-04 12:51:55.105000+00:00,2023-06-18 08:40:46.715000+00:00,conda,noarch/napari-mouse-controls-0.1.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'python >=3.7']",noarch,1643978958604.0,None-any-None,pyhd8ed1ab_0,2022-02-04 12:51:56.044000+00:00,1d0b35f181d7278c24bacfa1eddb6349,None,32214.0,conda-forge/napari-mouse-controls/0.1.3/noarch/napari-mouse-controls-0.1.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-mouse-controls/0.1.3/noarch/napari-mouse-controls-0.1.3-pyhd8ed1ab_0.tar.bz2,conda,0.1.3,conda-forge,['main'],public,,0.2.1,napari-mouse-controls.MouseControls,MouseControls,napari_mouse_controls._dock_widget:MouseControls,,,,2.1,napari-mouse-controls,0.1.3,['UNKNOWN'],Control napari using a touch screen,"# napari-mouse-controls +",text/markdown,https://github.com/guiwitz/napari-morphodynamics,Guillaume Witz,guillaume.witz@unibe.ch,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['morphodynamics', 'napari-convpaint', 'napari-guitils', 'napari-matplotlib', ""cellpose ; extra == 'cellpose'""]",>=3.9,"['Bug Tracker, https://github.com/guiwitz/napari-morphodynamics/issues', 'Documentation, https://github.com/guiwitz/napari-morphodynamics#README.md', 'Source Code, https://github.com/guiwitz/napari-morphodynamics', 'User Support, https://github.com/guiwitz/napari-morphodynamics/issues']",['cellpose'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-morphodynamics.make_qwidget,MorphoWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +252,napari-mouse-controls,0.1.3,napari-mouse-controls,Control napari using a touch screen,Robert Haase,BSD-3-Clause,https://github.com/haesleinhuepf/napari-mouse-controls,61fd216d6526fc1f99644f8a,['conda'],,https://github.com/haesleinhuepf/napari-mouse-controls,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-mouse-controls,http://api.anaconda.org/packages/conda-forge/napari-mouse-controls,http://anaconda.org/conda-forge/napari-mouse-controls,['0.1.3'],0.1.3,0.1.3,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.3,conda-forge/napari-mouse-controls/0.1.3,1.0,0.0,2022-02-04 12:51:55.105000+00:00,2023-06-18 08:40:46.715000+00:00,conda,noarch/napari-mouse-controls-0.1.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'python >=3.7']",noarch,1643978958604.0,None-any-None,pyhd8ed1ab_0,2022-02-04 12:51:56.044000+00:00,1d0b35f181d7278c24bacfa1eddb6349,None,32214.0,conda-forge/napari-mouse-controls/0.1.3/noarch/napari-mouse-controls-0.1.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-mouse-controls/0.1.3/noarch/napari-mouse-controls-0.1.3-pyhd8ed1ab_0.tar.bz2,conda,0.1.3,conda-forge,['main'],public,,0.2.1,napari-mouse-controls.MouseControls,MouseControls,napari_mouse_controls._dock_widget:MouseControls,,,,2.1,napari-mouse-controls,0.1.3,['UNKNOWN'],Control napari using a touch screen,"# napari-mouse-controls [![License](https://img.shields.io/pypi/l/napari-mouse-controls.svg?color=green)](https://github.com/haesleinhuepf/napari-mouse-controls/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-mouse-controls.svg?color=green)](https://pypi.org/project/napari-mouse-controls) @@ -26165,8 +27239,8 @@ If you encounter any problems, please create a thread on [image.sc] along with a [@haesleinhuepf]: https://twitter.com/haesleinhuepf -",text/markdown,https://github.com/haesleinhuepf/napari-mouse-controls,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari', 'napari-tools-menu']",>=3.7,"['Bug Tracker, https://github.com/haesleinhuepf/napari-mouse-control/issues', 'Documentation, https://github.com/haesleinhuepf/napari-mouse-controls#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-mouse-controls', 'User Support, https://github.com/haesleinhuepf/napari-mouse-controls/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-mouse-controls.MouseControls,MouseControls,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -242,napari-mrcfile-handler,0.0.6,napari-mrcfile-handler,"A simple plugin to read, write and adjust mrcfiles in napari.",Philipp Schoennenbeck,BSD-3-Clause,https://github.com/Croxa/napari-mrcfile_handler,62063e1bd464cf7f97e6138e,['conda'],,https://github.com/Croxa/napari-mrcfile_handler,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-mrcfile-handler,http://api.anaconda.org/packages/conda-forge/napari-mrcfile-handler,http://anaconda.org/conda-forge/napari-mrcfile-handler,['0.0.6'],0.0.6,0.0.6,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.6,conda-forge/napari-mrcfile-handler/0.0.6,1.0,0.0,2022-02-11 10:44:41.168000+00:00,2023-06-18 08:40:49.837000+00:00,conda,noarch/napari-mrcfile-handler-0.0.6-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['mrcfile', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7']",noarch,1644576139716.0,None-any-None,pyhd8ed1ab_0,2022-02-11 10:44:41.431000+00:00,58ab234f096ac4384402b382e5d3d6c8,None,11420.0,conda-forge/napari-mrcfile-handler/0.0.6/noarch/napari-mrcfile-handler-0.0.6-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-mrcfile-handler/0.0.6/noarch/napari-mrcfile-handler-0.0.6-pyhd8ed1ab_0.tar.bz2,conda,0.0.6,conda-forge,['main'],public,,0.2.1,napari-mrcfile-handler.PixelSpacing,PixelSpacing,napari_mrcfile_handler._dock_widget:PixelSpacing,napari-mrcfile-handler.napari_get_reader,['*'],True,2.1,napari-mrcfile-handler,0.0.6,['UNKNOWN'],"A simple plugin to read, write and adjust mrcfiles in napari.","# napari-mrcfile_handler +",text/markdown,https://github.com/haesleinhuepf/napari-mouse-controls,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari', 'napari-tools-menu']",>=3.7,"['Bug Tracker, https://github.com/haesleinhuepf/napari-mouse-control/issues', 'Documentation, https://github.com/haesleinhuepf/napari-mouse-controls#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-mouse-controls', 'User Support, https://github.com/haesleinhuepf/napari-mouse-controls/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-mouse-controls.MouseControls,MouseControls,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +253,napari-mrcfile-handler,0.0.6,napari-mrcfile-handler,"A simple plugin to read, write and adjust mrcfiles in napari.",Philipp Schoennenbeck,BSD-3-Clause,https://github.com/Croxa/napari-mrcfile_handler,62063e1bd464cf7f97e6138e,['conda'],,https://github.com/Croxa/napari-mrcfile_handler,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-mrcfile-handler,http://api.anaconda.org/packages/conda-forge/napari-mrcfile-handler,http://anaconda.org/conda-forge/napari-mrcfile-handler,['0.0.6'],0.0.6,0.0.6,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.6,conda-forge/napari-mrcfile-handler/0.0.6,1.0,0.0,2022-02-11 10:44:41.168000+00:00,2023-06-18 08:40:49.837000+00:00,conda,noarch/napari-mrcfile-handler-0.0.6-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['mrcfile', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7']",noarch,1644576139716.0,None-any-None,pyhd8ed1ab_0,2022-02-11 10:44:41.431000+00:00,58ab234f096ac4384402b382e5d3d6c8,None,11420.0,conda-forge/napari-mrcfile-handler/0.0.6/noarch/napari-mrcfile-handler-0.0.6-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-mrcfile-handler/0.0.6/noarch/napari-mrcfile-handler-0.0.6-pyhd8ed1ab_0.tar.bz2,conda,0.0.6,conda-forge,['main'],public,,0.2.1,napari-mrcfile-handler.PixelSpacing,PixelSpacing,napari_mrcfile_handler._dock_widget:PixelSpacing,napari-mrcfile-handler.napari_get_reader,['*'],True,2.1,napari-mrcfile-handler,0.0.6,['UNKNOWN'],"A simple plugin to read, write and adjust mrcfiles in napari.","# napari-mrcfile_handler [![License](https://img.shields.io/pypi/l/napari-mrcfile_handler.svg?color=green)](https://github.com/Croxa/napari-mrcfile_handler/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-mrcfile_handler.svg?color=green)](https://pypi.org/project/napari-mrcfile_handler) @@ -26225,8 +27299,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/Croxa/napari-mrcfile_handler,Philipp Schoennenbeck,p.schoennenbeck@fz-juelich.de,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'mrcfile']",>=3.7,"['Bug Tracker, https://github.com/Croxa/napari-mrcfile_handler/issues', 'Documentation, https://github.com/Croxa/napari-mrcfile_handler#README.md', 'Source Code, https://github.com/Croxa/napari-mrcfile_handler', 'User Support, https://github.com/Croxa/napari-mrcfile_handler/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-mrcfile-handler.PixelSpacing,PixelSpacing,False,,,,,,,,,,,,,napari-mrcfile-handler.napari_write_image,['image'],image,napari-mrcfile-handler.napari_write_labels,['labels'],,labels,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -243,napari-mrcfile-reader,0.2.0,napari-mrcfile-reader,Read MRC2014 files in napari using mrcfile.,Alister Burt,BSD-3-Clause,https://github.com/alisterburt/napari-mrcfile-reader,61f85b7f9501cf2a1dd73c4c,['conda'],,https://github.com/alisterburt/napari-mrcfile-reader,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-mrcfile-reader,http://api.anaconda.org/packages/conda-forge/napari-mrcfile-reader,http://anaconda.org/conda-forge/napari-mrcfile-reader,"['0.1.3', '0.2.0']",0.1.3,0.2.0,['noarch'],4.0,,['pyhd8ed1ab_0'],0.1.3,conda-forge/napari-mrcfile-reader/0.1.3,1.0,0.0,2022-01-31 21:58:21.877000+00:00,2023-07-26 00:11:13.781000+00:00,conda,noarch/napari-mrcfile-reader-0.1.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['mrcfile >=1.1', 'napari-plugin-engine >=0.1.4', 'numpy >=1.18', 'python >=3.6']",noarch,1643666274847.0,None-any-None,pyhd8ed1ab_0,2022-01-31 21:58:22.214000+00:00,a207f1c91c415fd067c714dbb95807ce,None,9560.0,conda-forge/napari-mrcfile-reader/0.1.3/noarch/napari-mrcfile-reader-0.1.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-mrcfile-reader/0.1.3/noarch/napari-mrcfile-reader-0.1.3-pyhd8ed1ab_0.tar.bz2,conda,0.1.3,conda-forge,['main'],public,,0.2.1,napari-mrcfile-reader.get_reader,Open data with napari-mrcfile-reader,napari_mrcfile_reader._reader:napari_get_reader,napari-mrcfile-reader.get_reader,"['*.mrc', '*.mrcs', '*.map', '*.st', '*.rec', '*.preali', '*.ali']",False,2.1,napari-mrcfile-reader,0.2.0,,Read MRC2014 files in napari using mrcfile.,"# napari-mrcfile-reader +",text/markdown,https://github.com/Croxa/napari-mrcfile_handler,Philipp Schoennenbeck,p.schoennenbeck@fz-juelich.de,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'mrcfile']",>=3.7,"['Bug Tracker, https://github.com/Croxa/napari-mrcfile_handler/issues', 'Documentation, https://github.com/Croxa/napari-mrcfile_handler#README.md', 'Source Code, https://github.com/Croxa/napari-mrcfile_handler', 'User Support, https://github.com/Croxa/napari-mrcfile_handler/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-mrcfile-handler.PixelSpacing,PixelSpacing,False,,,,,,,,,,,,,napari-mrcfile-handler.napari_write_image,['image'],image,napari-mrcfile-handler.napari_write_labels,['labels'],,labels,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +254,napari-mrcfile-reader,0.2.0,napari-mrcfile-reader,Read MRC2014 files in napari using mrcfile.,Alister Burt,BSD-3-Clause,https://github.com/alisterburt/napari-mrcfile-reader,61f85b7f9501cf2a1dd73c4c,['conda'],,https://github.com/alisterburt/napari-mrcfile-reader,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-mrcfile-reader,http://api.anaconda.org/packages/conda-forge/napari-mrcfile-reader,http://anaconda.org/conda-forge/napari-mrcfile-reader,"['0.1.3', '0.2.0']",0.1.3,0.2.0,['noarch'],4.0,,['pyhd8ed1ab_0'],0.1.3,conda-forge/napari-mrcfile-reader/0.1.3,1.0,0.0,2022-01-31 21:58:21.877000+00:00,2023-07-26 00:11:13.781000+00:00,conda,noarch/napari-mrcfile-reader-0.1.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['mrcfile >=1.1', 'napari-plugin-engine >=0.1.4', 'numpy >=1.18', 'python >=3.6']",noarch,1643666274847.0,None-any-None,pyhd8ed1ab_0,2022-01-31 21:58:22.214000+00:00,a207f1c91c415fd067c714dbb95807ce,None,9560.0,conda-forge/napari-mrcfile-reader/0.1.3/noarch/napari-mrcfile-reader-0.1.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-mrcfile-reader/0.1.3/noarch/napari-mrcfile-reader-0.1.3-pyhd8ed1ab_0.tar.bz2,conda,0.1.3,conda-forge,['main'],public,,0.2.1,napari-mrcfile-reader.get_reader,Open data with napari-mrcfile-reader,napari_mrcfile_reader._reader:napari_get_reader,napari-mrcfile-reader.get_reader,"['*.mrc', '*.mrcs', '*.map', '*.st', '*.rec', '*.preali', '*.ali']",False,2.1,napari-mrcfile-reader,0.2.0,,Read MRC2014 files in napari using mrcfile.,"# napari-mrcfile-reader [![License](https://img.shields.io/pypi/l/napari-mrcfile-reader.svg?color=green)](https://github.com/alisterburt/napari-mrcfile-reader/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-mrcfile-reader.svg?color=green)](https://pypi.org/project/napari-mrcfile-reader) @@ -26281,8 +27355,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/alisterburt/napari-mrcfile-reader,Alister Burt,alisterburt@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'mrcfile', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/alisterburt/napari-mrcfile-reader/issues', 'Documentation, https://github.com/alisterburt/napari-mrcfile-reader#README.md', 'Source Code, https://github.com/alisterburt/napari-mrcfile-reader', 'User Support, https://github.com/alisterburt/napari-mrcfile-reader/issues']",['testing'],False,0.2.0,conda-forge/napari-mrcfile-reader/0.2.0,,,,,conda,noarch/napari-mrcfile-reader-0.2.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['mrcfile >=1.1', 'numpy >=1.18', 'python >=3.8']",pyhd8ed1ab_0,1690330208065.0,None-any-None,noarch,2023-07-26 00:11:11.186000+00:00,ee9d573e1b87fb5b5e37d37d29b74977,34779751b2d3a1a7c10ed1cac37540de7607ac1b197f96ea77117088b77b74dc,12050.0,conda-forge/napari-mrcfile-reader/0.2.0/noarch/napari-mrcfile-reader-0.2.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-mrcfile-reader/0.2.0/noarch/napari-mrcfile-reader-0.2.0-pyhd8ed1ab_0.conda,conda,0.2.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -244,napari-multitask,0.0.2,napari-multitask,Multitasking in napari,Hanjin Liu,BSD 3-Clause,UNKNOWN,6217ca44019cbc148a47ecf1,['conda'],,https://pypi.org/project/napari-multitask/,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-multitask,http://api.anaconda.org/packages/conda-forge/napari-multitask,http://anaconda.org/conda-forge/napari-multitask,['0.0.2'],0.0.2,0.0.2,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.2,conda-forge/napari-multitask/0.0.2,1.0,0.0,2022-02-24 18:11:12.020000+00:00,2023-06-18 08:40:56.281000+00:00,conda,noarch/napari-multitask-0.0.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magic-class >=0.5.11', 'napari', 'python >=3.8']",noarch,1645726134755.0,None-any-None,pyhd8ed1ab_0,2022-02-24 18:11:13.115000+00:00,106d2aa7f9e3aff3bf1c783e1ec85f09,None,10047.0,conda-forge/napari-multitask/0.0.2/noarch/napari-multitask-0.0.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-multitask/0.0.2/noarch/napari-multitask-0.0.2-pyhd8ed1ab_0.tar.bz2,conda,0.0.2,conda-forge,['main'],public,,0.2.1,napari-multitask.TaskView,TaskView,napari_multitask.taskview:TaskView,,,,2.1,napari-multitask,0.0.2,['UNKNOWN'],Multitasking in napari,"# napari-multitask +",text/markdown,https://github.com/alisterburt/napari-mrcfile-reader,Alister Burt,alisterburt@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'mrcfile', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/alisterburt/napari-mrcfile-reader/issues', 'Documentation, https://github.com/alisterburt/napari-mrcfile-reader#README.md', 'Source Code, https://github.com/alisterburt/napari-mrcfile-reader', 'User Support, https://github.com/alisterburt/napari-mrcfile-reader/issues']",['testing'],False,0.2.0,conda-forge/napari-mrcfile-reader/0.2.0,,,,,conda,noarch/napari-mrcfile-reader-0.2.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['mrcfile >=1.1', 'numpy >=1.18', 'python >=3.8']",pyhd8ed1ab_0,1690330208065.0,None-any-None,noarch,2023-07-26 00:11:11.186000+00:00,ee9d573e1b87fb5b5e37d37d29b74977,34779751b2d3a1a7c10ed1cac37540de7607ac1b197f96ea77117088b77b74dc,12050.0,conda-forge/napari-mrcfile-reader/0.2.0/noarch/napari-mrcfile-reader-0.2.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-mrcfile-reader/0.2.0/noarch/napari-mrcfile-reader-0.2.0-pyhd8ed1ab_0.conda,conda,0.2.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +255,napari-multitask,0.0.2,napari-multitask,Multitasking in napari,Hanjin Liu,BSD 3-Clause,UNKNOWN,6217ca44019cbc148a47ecf1,['conda'],,https://pypi.org/project/napari-multitask/,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-multitask,http://api.anaconda.org/packages/conda-forge/napari-multitask,http://anaconda.org/conda-forge/napari-multitask,['0.0.2'],0.0.2,0.0.2,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.2,conda-forge/napari-multitask/0.0.2,1.0,0.0,2022-02-24 18:11:12.020000+00:00,2023-06-18 08:40:56.281000+00:00,conda,noarch/napari-multitask-0.0.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magic-class >=0.5.11', 'napari', 'python >=3.8']",noarch,1645726134755.0,None-any-None,pyhd8ed1ab_0,2022-02-24 18:11:13.115000+00:00,106d2aa7f9e3aff3bf1c783e1ec85f09,None,10047.0,conda-forge/napari-multitask/0.0.2/noarch/napari-multitask-0.0.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-multitask/0.0.2/noarch/napari-multitask-0.0.2-pyhd8ed1ab_0.tar.bz2,conda,0.0.2,conda-forge,['main'],public,,0.2.1,napari-multitask.TaskView,TaskView,napari_multitask.taskview:TaskView,,,,2.1,napari-multitask,0.0.2,['UNKNOWN'],Multitasking in napari,"# napari-multitask Multitasking on napari. @@ -26297,8 +27371,8 @@ pip install napari-multitask ``` -",text/markdown,UNKNOWN,Hanjin Liu,liuhanjin-sc@g.ecc.u-tokyo.ac.jp,BSD 3-Clause,"['Framework :: napari', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9']",['magic-class (>=0.5.11)'],>=3.8,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-multitask.TaskView,TaskView,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -245,napari-mzarr,0.0.3,Napari Mzarr,A reader and writer plugin for the Mzarr image format.,Karol Gotkowski,Apache-2.0,,6536cecbfeeab3f5dcbc6b2a,['conda'],,https://pypi.org/project/napari-mzarr,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-mzarr,http://api.anaconda.org/packages/conda-forge/napari-mzarr,http://anaconda.org/conda-forge/napari-mzarr,['0.0.3'],0.0.3,0.0.3,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.3,conda-forge/napari-mzarr/0.0.3,1.0,0.0,2023-10-23 19:51:35.485000+00:00,2023-10-23 19:51:39.771000+00:00,conda,noarch/napari-mzarr-0.0.3-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['dask-core', 'imagecodecs 2023.1.23', 'napari', 'numcodecs', 'numpy', 'python >=3.8', 'zarr']",noarch,1698090568465.0,None-any-None,pyhd8ed1ab_0,2023-10-23 19:51:36.938000+00:00,4ab99b22b8db87443e4a6b1f64b36e47,226c07a6204a1a963069d02e3f8ad3717e299f18d08a3c6b0f1be81020ecd047,14692.0,conda-forge/napari-mzarr/0.0.3/noarch/napari-mzarr-0.0.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-mzarr/0.0.3/noarch/napari-mzarr-0.0.3-pyhd8ed1ab_0.conda,conda,0.0.3,conda-forge,['main'],public,,0.2.1,napari-mzarr.get_reader,Open data with Napari Mzarr,napari_mzarr._reader:napari_get_reader,napari-mzarr.get_reader,"['*.mzarr', '*.mzz']",False,2.1,napari-mzarr,0.0.3,,A reader and writer plugin for the Mzarr image format.,"# napari-mzarr +",text/markdown,UNKNOWN,Hanjin Liu,liuhanjin-sc@g.ecc.u-tokyo.ac.jp,BSD 3-Clause,"['Framework :: napari', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9']",['magic-class (>=0.5.11)'],>=3.8,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-multitask.TaskView,TaskView,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +256,napari-mzarr,0.0.3,Napari Mzarr,A reader and writer plugin for the Mzarr image format.,Karol Gotkowski,Apache-2.0,,6536cecbfeeab3f5dcbc6b2a,['conda'],,https://pypi.org/project/napari-mzarr,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-mzarr,http://api.anaconda.org/packages/conda-forge/napari-mzarr,http://anaconda.org/conda-forge/napari-mzarr,['0.0.3'],0.0.3,0.0.3,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.3,conda-forge/napari-mzarr/0.0.3,1.0,0.0,2023-10-23 19:51:35.485000+00:00,2023-10-23 19:51:39.771000+00:00,conda,noarch/napari-mzarr-0.0.3-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['dask-core', 'imagecodecs 2023.1.23', 'napari', 'numcodecs', 'numpy', 'python >=3.8', 'zarr']",noarch,1698090568465.0,None-any-None,pyhd8ed1ab_0,2023-10-23 19:51:36.938000+00:00,4ab99b22b8db87443e4a6b1f64b36e47,226c07a6204a1a963069d02e3f8ad3717e299f18d08a3c6b0f1be81020ecd047,14692.0,conda-forge/napari-mzarr/0.0.3/noarch/napari-mzarr-0.0.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-mzarr/0.0.3/noarch/napari-mzarr-0.0.3-pyhd8ed1ab_0.conda,conda,0.0.3,conda-forge,['main'],public,,0.2.1,napari-mzarr.get_reader,Open data with Napari Mzarr,napari_mzarr._reader:napari_get_reader,napari-mzarr.get_reader,"['*.mzarr', '*.mzz']",False,2.1,napari-mzarr,0.0.3,,A reader and writer plugin for the Mzarr image format.,"# napari-mzarr [![License Apache Software License 2.0](https://img.shields.io/pypi/l/napari-mzarr.svg?color=green)](https://github.com/Karol-G/napari-mzarr/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-mzarr.svg?color=green)](https://pypi.org/project/napari-mzarr) @@ -26359,8 +27433,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,,Karol Gotkowski,karol.gotkowski@dkfz.de,Apache-2.0,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'zarr', 'numcodecs', 'imagecodecs ==2023.1.23', 'dask', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.8,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-mzarr.write_multiple,Save multi-layer data with Napari Mzarr,napari_mzarr._writer:write_multiple,napari-mzarr.write_single_image,Save image data with Napari Mzarr,napari_mzarr._writer:write_single_image,,,,,,,,,,,,,,,,,,,napari-mzarr.write_multiple,"['image*', 'labels*']",,napari-mzarr.write_single_image,['image'],['.mzarr'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -246,napari-n2v,0.1.1,napari n2v,A self-supervised denoising algorithm now usable by all in napari.,"Tom Burke, Joran Deschamps",BSD-3-Clause,https://github.com/juglab/napari-n2v,63aec87ed0e8c095e2ce0096,['conda'],,https://github.com/juglab/napari-n2v,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-n2v,http://api.anaconda.org/packages/conda-forge/napari-n2v,http://anaconda.org/conda-forge/napari-n2v,"['0.0.2', '0.1.0', '0.1.1']",0.1.0,0.1.1,['noarch'],5.0,,['pyhd8ed1ab_0'],0.0.2,conda-forge/napari-n2v/0.0.2,1.0,0.0,2022-12-30 11:16:10.856000+00:00,2023-09-06 13:10:43.618000+00:00,conda,noarch/napari-n2v-0.0.2-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['bioimageio.core', 'imageio !=2.11.0,!=2.22.1,>=2.5.0', 'magicgui', 'n2v >=0.3.2', 'napari <=0.4.15', 'napari-time-slicer >=0.4.9', 'numpy', 'pyqtgraph', 'python >=3.7', 'qtpy', 'scikit-image', 'tensorflow', 'vispy <=0.9.6']",noarch,1672398822231.0,None-any-None,pyhd8ed1ab_0,2022-12-30 11:16:11.633000+00:00,526c043d34a7aaee009d62b2db552680,181eb779d49a765738873277d99db4c246143a1e3882cbca319ffaba2245289e,46885.0,conda-forge/napari-n2v/0.0.2/noarch/napari-n2v-0.0.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-n2v/0.0.2/noarch/napari-n2v-0.0.2-pyhd8ed1ab_0.conda,conda,0.0.2,conda-forge,['main'],public,,0.2.1,napari-n2v.make_n2v_trainwidget,Make N2V widget,napari_n2v._train_widget:TrainingWidgetWrapper,,,,2.1,napari-n2v,0.1.1,,A self-supervised denoising algorithm now usable by all in napari.,"# napari-n2v +",text/markdown,,Karol Gotkowski,karol.gotkowski@dkfz.de,Apache-2.0,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'zarr', 'numcodecs', 'imagecodecs ==2023.1.23', 'dask', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.8,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-mzarr.write_multiple,Save multi-layer data with Napari Mzarr,napari_mzarr._writer:write_multiple,napari-mzarr.write_single_image,Save image data with Napari Mzarr,napari_mzarr._writer:write_single_image,,,,,,,,,,,,,,,,,,,napari-mzarr.write_multiple,"['image*', 'labels*']",,napari-mzarr.write_single_image,['image'],['.mzarr'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +257,napari-n2v,0.1.1,napari n2v,A self-supervised denoising algorithm now usable by all in napari.,"Tom Burke, Joran Deschamps",BSD-3-Clause,https://github.com/juglab/napari-n2v,63aec87ed0e8c095e2ce0096,['conda'],,https://github.com/juglab/napari-n2v,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-n2v,http://api.anaconda.org/packages/conda-forge/napari-n2v,http://anaconda.org/conda-forge/napari-n2v,"['0.0.2', '0.1.0', '0.1.1']",0.1.0,0.1.1,['noarch'],5.0,,['pyhd8ed1ab_0'],0.0.2,conda-forge/napari-n2v/0.0.2,1.0,0.0,2022-12-30 11:16:10.856000+00:00,2023-09-06 13:10:43.618000+00:00,conda,noarch/napari-n2v-0.0.2-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['bioimageio.core', 'imageio !=2.11.0,!=2.22.1,>=2.5.0', 'magicgui', 'n2v >=0.3.2', 'napari <=0.4.15', 'napari-time-slicer >=0.4.9', 'numpy', 'pyqtgraph', 'python >=3.7', 'qtpy', 'scikit-image', 'tensorflow', 'vispy <=0.9.6']",noarch,1672398822231.0,None-any-None,pyhd8ed1ab_0,2022-12-30 11:16:11.633000+00:00,526c043d34a7aaee009d62b2db552680,181eb779d49a765738873277d99db4c246143a1e3882cbca319ffaba2245289e,46885.0,conda-forge/napari-n2v/0.0.2/noarch/napari-n2v-0.0.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-n2v/0.0.2/noarch/napari-n2v-0.0.2-pyhd8ed1ab_0.conda,conda,0.0.2,conda-forge,['main'],public,,0.2.1,napari-n2v.make_n2v_trainwidget,Make N2V widget,napari_n2v._train_widget:TrainingWidgetWrapper,,,,2.1,napari-n2v,0.1.1,,A self-supervised denoising algorithm now usable by all in napari.,"# napari-n2v [![License](https://img.shields.io/pypi/l/napari-n2v.svg?color=green)](https://github.com/juglab/napari-n2v/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-n2v.svg?color=green)](https://pypi.org/project/napari-n2v) @@ -26447,8 +27521,8 @@ Distributed under the terms of the [BSD-3] license, [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/juglab/napari-n2v,"Tom Burke, Joran Deschamps",joran.deschamps@fht.org,BSD-3-Clause,"['Framework :: napari', 'Development Status :: 4 - Beta', 'Intended Audience :: Science/Research', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['scikit-image', 'bioimageio.core', 'n2v >=0.3.2', 'napari-time-slicer >=0.4.9', 'napari', 'qtpy', 'pyqtgraph', 'tensorflow >=2.10.0 ; platform_system != ""Darwin"" or platform_machine != ""arm64""', 'tensorflow-macos ; platform_system == ""Darwin"" and platform_machine == ""arm64""', 'tensorflow-metal ; platform_system == ""Darwin"" and platform_machine == ""arm64""', 'numpy <1.24.0 ; python_version < ""3.9""', 'numpy ; python_version >= ""3.9""', ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/juglab/napari-n2v/issues', 'Documentation, https://juglab.github.io/napari-n2v/', 'Source Code, https://github.com/juglab/napari-n2v', 'User Support, https://github.com/juglab/napari-n2v/issues']",['testing'],False,0.1.0,conda-forge/napari-n2v/0.1.0,0.1.1,conda-forge/napari-n2v/0.1.1,,,conda,noarch/napari-n2v-0.1.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['bioimageio.core', 'imageio !=2.11.0,!=2.22.1,>=2.5.0', 'magicgui', 'n2v >=0.3.2', 'napari <=0.4.15', 'napari-time-slicer >=0.4.9', 'numpy', 'protobuf >=3.9.2,<3.20', 'pyqtgraph', 'python >=3.7', 'qtpy', 'scikit-image', 'tensorflow', 'vispy <=0.9.6']",pyhd8ed1ab_0,1682248388348.0,None-any-None,noarch,2023-04-23 11:16:59.849000+00:00,c95908ae27da5881807ba9cf1919abf0,71f965d7451d22b7b98c19441d954a1f2eb4f7aa447b0f0f10505dee59378cea,59237.0,conda-forge/napari-n2v/0.1.0/noarch/napari-n2v-0.1.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-n2v/0.1.0/noarch/napari-n2v-0.1.0-pyhd8ed1ab_0.conda,conda,0.1.0,conda-forge,['main'],conda,noarch/napari-n2v-0.1.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['bioimageio.core', 'n2v >=0.3.2', 'napari', 'napari-time-slicer >=0.4.9', 'numpy', 'pyqtgraph', 'python >=3.7', 'qtpy', 'scikit-image', 'tensorflow >=2.10.0']",noarch,1694005340223.0,None-any-None,pyhd8ed1ab_0,2023-09-06 13:10:38.275000+00:00,a891e49bd708ff7305208e1fe0a7d812,d9e4b43c22ffca5e12d88d7d7b3e14a11a7b48ea96f20d4dc323970a0c529d64,59490.0,conda-forge/napari-n2v/0.1.1/noarch/napari-n2v-0.1.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-n2v/0.1.1/noarch/napari-n2v-0.1.1-pyhd8ed1ab_0.conda,conda,0.1.1,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,napari-n2v.make_n2v_predictwidget,Make N2V predict widget,napari_n2v._predict_widget:PredictWidgetWrapper,napari-n2v.make_n2v_demo_prediction,Make N2V demo prediction,napari_n2v._predict_widget:DemoPrediction,napari-n2v.data_2D,N2V 2D data,napari_n2v._sample_data:n2v_2D_data,napari-n2v.make_n2v_trainwidget,N2V Train,False,napari-n2v.make_n2v_predictwidget,N2V Predict,False,napari-n2v.make_n2v_demo_prediction,N2V Demo prediction,False,,,,napari-n2v.data_3D,N2V 3D data,napari_n2v._sample_data:n2v_3D_data,,,,,,,,napari-n2v.data_2D,napari_n2v_2D_data,Download data (2D),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-n2v.data_3D,napari_n2v_3D_data,Download data (3D),napari-n2v.data_RGB,N2V RGB data,napari_n2v._sample_data:n2v_rgb_data,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-n2v.data_SEM,N2V SEM data,napari_n2v._sample_data:n2v_sem_data,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-n2v.data_RGB,napari_n2v_RGB_data,Download data (RGB) -247,napari-nanopyx,0.1.5,napari NanoPyx,"napari plugin of Nanoscopy Python library (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging","Ricardo Henriques, Bruno Saraiva, Inês Cunha, António Brito",LGPL-3.0-only,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-nanopyx.benchmark,Benchmark Liquid Engine methods,napari_nanopyx.benchmarking:benchmark_nanopyx,,,,2.1,napari-nanopyx,0.1.5,,"napari plugin of Nanoscopy Python library (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging","# napari-nanopyx +",text/markdown,https://github.com/juglab/napari-n2v,"Tom Burke, Joran Deschamps",joran.deschamps@fht.org,BSD-3-Clause,"['Framework :: napari', 'Development Status :: 4 - Beta', 'Intended Audience :: Science/Research', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['scikit-image', 'bioimageio.core', 'n2v >=0.3.2', 'napari-time-slicer >=0.4.9', 'napari', 'qtpy', 'pyqtgraph', 'tensorflow >=2.10.0 ; platform_system != ""Darwin"" or platform_machine != ""arm64""', 'tensorflow-macos ; platform_system == ""Darwin"" and platform_machine == ""arm64""', 'tensorflow-metal ; platform_system == ""Darwin"" and platform_machine == ""arm64""', 'numpy <1.24.0 ; python_version < ""3.9""', 'numpy ; python_version >= ""3.9""', ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/juglab/napari-n2v/issues', 'Documentation, https://juglab.github.io/napari-n2v/', 'Source Code, https://github.com/juglab/napari-n2v', 'User Support, https://github.com/juglab/napari-n2v/issues']",['testing'],False,0.1.0,conda-forge/napari-n2v/0.1.0,0.1.1,conda-forge/napari-n2v/0.1.1,,,conda,noarch/napari-n2v-0.1.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['bioimageio.core', 'imageio !=2.11.0,!=2.22.1,>=2.5.0', 'magicgui', 'n2v >=0.3.2', 'napari <=0.4.15', 'napari-time-slicer >=0.4.9', 'numpy', 'protobuf >=3.9.2,<3.20', 'pyqtgraph', 'python >=3.7', 'qtpy', 'scikit-image', 'tensorflow', 'vispy <=0.9.6']",pyhd8ed1ab_0,1682248388348.0,None-any-None,noarch,2023-04-23 11:16:59.849000+00:00,c95908ae27da5881807ba9cf1919abf0,71f965d7451d22b7b98c19441d954a1f2eb4f7aa447b0f0f10505dee59378cea,59237.0,conda-forge/napari-n2v/0.1.0/noarch/napari-n2v-0.1.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-n2v/0.1.0/noarch/napari-n2v-0.1.0-pyhd8ed1ab_0.conda,conda,0.1.0,conda-forge,['main'],conda,noarch/napari-n2v-0.1.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['bioimageio.core', 'n2v >=0.3.2', 'napari', 'napari-time-slicer >=0.4.9', 'numpy', 'pyqtgraph', 'python >=3.7', 'qtpy', 'scikit-image', 'tensorflow >=2.10.0']",noarch,1694005340223.0,None-any-None,pyhd8ed1ab_0,2023-09-06 13:10:38.275000+00:00,a891e49bd708ff7305208e1fe0a7d812,d9e4b43c22ffca5e12d88d7d7b3e14a11a7b48ea96f20d4dc323970a0c529d64,59490.0,conda-forge/napari-n2v/0.1.1/noarch/napari-n2v-0.1.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-n2v/0.1.1/noarch/napari-n2v-0.1.1-pyhd8ed1ab_0.conda,conda,0.1.1,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,napari-n2v.make_n2v_predictwidget,Make N2V predict widget,napari_n2v._predict_widget:PredictWidgetWrapper,napari-n2v.make_n2v_demo_prediction,Make N2V demo prediction,napari_n2v._predict_widget:DemoPrediction,napari-n2v.data_2D,N2V 2D data,napari_n2v._sample_data:n2v_2D_data,napari-n2v.make_n2v_trainwidget,N2V Train,False,napari-n2v.make_n2v_predictwidget,N2V Predict,False,napari-n2v.make_n2v_demo_prediction,N2V Demo prediction,False,,,,napari-n2v.data_3D,N2V 3D data,napari_n2v._sample_data:n2v_3D_data,,,,,,,,napari-n2v.data_2D,napari_n2v_2D_data,Download data (2D),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-n2v.data_3D,napari_n2v_3D_data,Download data (3D),napari-n2v.data_RGB,N2V RGB data,napari_n2v._sample_data:n2v_rgb_data,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-n2v.data_SEM,N2V SEM data,napari_n2v._sample_data:n2v_sem_data,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-n2v.data_RGB,napari_n2v_RGB_data,Download data (RGB) +258,napari-nanopyx,0.1.5,napari NanoPyx,"napari plugin of Nanoscopy Python library (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging","Ricardo Henriques, Bruno Saraiva, Inês Cunha, António Brito",LGPL-3.0-only,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-nanopyx.benchmark,Benchmark Liquid Engine methods,napari_nanopyx.benchmarking:benchmark_nanopyx,,,,2.1,napari-nanopyx,0.1.5,,"napari plugin of Nanoscopy Python library (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging","# napari-nanopyx @@ -26527,8 +27601,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc ## Citing If you found this work useful, please cite: [preprint](https://www.biorxiv.org/content/10.1101/2023.08.13.553080v1) and [![DOI](https://zenodo.org/badge/505388398.svg)](https://zenodo.org/badge/latestdoi/505388398) -",text/markdown,,"Ricardo Henriques, Bruno Saraiva, Inês Cunha, António Brito",bruno.msaraiva2@gmail.com,LGPL-3.0-only,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU Lesser General Public License v3 (LGPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Topic :: Software Development :: Testing']","['napari', 'nanopyx >=0.3.1', 'scikit-image', 'magicgui', ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.9,"['Bug Tracker, https://github.com/HenriquesLab/napari-NanoPyx/issues', 'Documentation, https://github.com/HenriquesLab/napari-NanoPyx/wiki', 'Source Code, https://github.com/HenriquesLab/napari-NanoPyx', 'User Support, https://github.com/HenriquesLab/napari-NanoPyx/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-nanopyx.estimate_drift_alignment,Estimate Drift Alignment,napari_nanopyx.drift_alignment:estimate_drift_alignment,napari-nanopyx.apply_drift_alignment,Apply Drift Alignment,napari_nanopyx.drift_alignment:apply_drift_alignment,napari-nanopyx.estimate_channel_registration,Estimate Channel Registration,napari_nanopyx.channel_registration:estimate_channel_registration,napari-nanopyx.benchmark,Benchmark Liquid Engine methods,False,napari-nanopyx.estimate_drift_alignment,Estimate Drift Correction,False,napari-nanopyx.apply_drift_alignment,Apply Drift Correction,False,napari-nanopyx.estimate_channel_registration,Estimate Channel Alignment,False,napari-nanopyx.apply_channel_registration,Apply Channel Registration,napari_nanopyx.channel_registration:apply_channel_registration,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-nanopyx.generate_srrf_image,Generate SRRF Image,napari_nanopyx.srrf:generate_srrf_image,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-nanopyx.calculate_frc,Calculate FRC,napari_nanopyx.squirrel:calculate_frc,napari-nanopyx.calculate_decorr_analysis,Calculate Decorrelation Analysis,napari_nanopyx.squirrel:calculate_decorr_analysis,napari-nanopyx.calculate_error_map,Calculate Error Map,napari_nanopyx.squirrel:calculate_error_map,napari-nanopyx.generate_esrrf_image,Generate eSRRF Image,napari_nanopyx.esrrf:generate_esrrf_image,napari-nanopyx.nlm_denoise_image,Non-local Means Denoising,napari_nanopyx.nlm_denoising:denoising_img,,,,,napari-nanopyx.apply_channel_registration,Apply Channel Alignment,False,napari-nanopyx.generate_srrf_image,Generate SRRF Image,False,napari-nanopyx.calculate_frc,Calculate FRC,False,napari-nanopyx.calculate_decorr_analysis,Calculate Decorrelation Analysis,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -248,napari-napari,0.0.1,Napari Napari,A napari viewer of the napari viewer,Jordao Bragantini,BSD-3-Clause,https://github.com/jookuma/napari-napari,64c940da508e2e55ceff23e2,['conda'],,https://github.com/jookuma/napari-napari,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-napari,http://api.anaconda.org/packages/conda-forge/napari-napari,http://anaconda.org/conda-forge/napari-napari,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,,['pyh9208f05_0'],0.0.1,conda-forge/napari-napari/0.0.1,1.0,0.0,2023-08-01 17:28:56.202000+00:00,2023-08-01 17:28:58.839000+00:00,conda,noarch/napari-napari-0.0.1-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy']",noarch,1690910771855.0,None-any-None,pyh9208f05_0,2023-08-01 17:28:56.566000+00:00,6144a0036765510a8eaf76a339bfb710,ffd732f0b2176f1ad005bff7785149d4038234bc104c1b82d76ff106d27a6114,10773.0,conda-forge/napari-napari/0.0.1/noarch/napari-napari-0.0.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-napari/0.0.1/noarch/napari-napari-0.0.1-pyh9208f05_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-napari.napari,napari,napari_napari._widget:Napari,,,,2.1,napari-napari,0.0.1,,A napari viewer of the napari viewer,"# [napari-napari](https://github.com/jookuma/napari-napari) +",text/markdown,,"Ricardo Henriques, Bruno Saraiva, Inês Cunha, António Brito",bruno.msaraiva2@gmail.com,LGPL-3.0-only,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU Lesser General Public License v3 (LGPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Topic :: Software Development :: Testing']","['napari', 'nanopyx >=0.3.1', 'scikit-image', 'magicgui', ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.9,"['Bug Tracker, https://github.com/HenriquesLab/napari-NanoPyx/issues', 'Documentation, https://github.com/HenriquesLab/napari-NanoPyx/wiki', 'Source Code, https://github.com/HenriquesLab/napari-NanoPyx', 'User Support, https://github.com/HenriquesLab/napari-NanoPyx/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-nanopyx.estimate_drift_alignment,Estimate Drift Alignment,napari_nanopyx.drift_alignment:estimate_drift_alignment,napari-nanopyx.apply_drift_alignment,Apply Drift Alignment,napari_nanopyx.drift_alignment:apply_drift_alignment,napari-nanopyx.estimate_channel_registration,Estimate Channel Registration,napari_nanopyx.channel_registration:estimate_channel_registration,napari-nanopyx.benchmark,Benchmark Liquid Engine methods,False,napari-nanopyx.estimate_drift_alignment,Estimate Drift Correction,False,napari-nanopyx.apply_drift_alignment,Apply Drift Correction,False,napari-nanopyx.estimate_channel_registration,Estimate Channel Alignment,False,napari-nanopyx.apply_channel_registration,Apply Channel Registration,napari_nanopyx.channel_registration:apply_channel_registration,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-nanopyx.generate_srrf_image,Generate SRRF Image,napari_nanopyx.srrf:generate_srrf_image,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-nanopyx.calculate_frc,Calculate FRC,napari_nanopyx.squirrel:calculate_frc,napari-nanopyx.calculate_decorr_analysis,Calculate Decorrelation Analysis,napari_nanopyx.squirrel:calculate_decorr_analysis,napari-nanopyx.calculate_error_map,Calculate Error Map,napari_nanopyx.squirrel:calculate_error_map,napari-nanopyx.generate_esrrf_image,Generate eSRRF Image,napari_nanopyx.esrrf:generate_esrrf_image,napari-nanopyx.nlm_denoise_image,Non-local Means Denoising,napari_nanopyx.nlm_denoising:denoising_img,,napari-nanopyx.apply_channel_registration,Apply Channel Alignment,False,napari-nanopyx.generate_srrf_image,Generate SRRF Image,False,napari-nanopyx.calculate_frc,Calculate FRC,False,napari-nanopyx.calculate_decorr_analysis,Calculate Decorrelation Analysis,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +259,napari-napari,0.0.1,Napari Napari,A napari viewer of the napari viewer,Jordao Bragantini,BSD-3-Clause,https://github.com/jookuma/napari-napari,64c940da508e2e55ceff23e2,['conda'],,https://github.com/jookuma/napari-napari,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-napari,http://api.anaconda.org/packages/conda-forge/napari-napari,http://anaconda.org/conda-forge/napari-napari,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,,['pyh9208f05_0'],0.0.1,conda-forge/napari-napari/0.0.1,1.0,0.0,2023-08-01 17:28:56.202000+00:00,2023-08-01 17:28:58.839000+00:00,conda,noarch/napari-napari-0.0.1-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy']",noarch,1690910771855.0,None-any-None,pyh9208f05_0,2023-08-01 17:28:56.566000+00:00,6144a0036765510a8eaf76a339bfb710,ffd732f0b2176f1ad005bff7785149d4038234bc104c1b82d76ff106d27a6114,10773.0,conda-forge/napari-napari/0.0.1/noarch/napari-napari-0.0.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-napari/0.0.1/noarch/napari-napari-0.0.1-pyh9208f05_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-napari.napari,napari,napari_napari._widget:Napari,,,,2.1,napari-napari,0.0.1,,A napari viewer of the napari viewer,"# [napari-napari](https://github.com/jookuma/napari-napari) [![License BSD-3](https://img.shields.io/pypi/l/napari-napari.svg?color=green)](https://github.com/jookuma/napari-napari/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-napari.svg?color=green)](https://pypi.org/project/napari-napari) @@ -26597,8 +27671,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/jookuma/napari-napari,Jordao Bragantini,jordao.bragantini@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/jookuma/napari-napari/issues', 'Documentation, https://github.com/jookuma/napari-napari#README.md', 'Source Code, https://github.com/jookuma/napari-napari', 'User Support, https://github.com/jookuma/napari-napari/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-napari.napari,napari,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -249,napari-nasa-samples,0.0.5,NASA sample images,This napari plugin provides sample datasets from NASA.,Loic A. Royer,MPL-2.0,https://github.com/royerloic/napari-nasa-samples,62fdff097a1e7124db3bf3a7,['conda'],,https://github.com/royerloic/napari-nasa-samples,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-nasa-samples,http://api.anaconda.org/packages/conda-forge/napari-nasa-samples,http://anaconda.org/conda-forge/napari-nasa-samples,['0.0.5'],0.0.5,0.0.5,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.5,conda-forge/napari-nasa-samples/0.0.5,1.0,0.0,2022-08-18 08:57:42.635000+00:00,2023-06-18 08:42:20.303000+00:00,conda,noarch/napari-nasa-samples-0.0.5-pyhd8ed1ab_0.tar.bz2,0.0,MPL-2.0,False,python,"['imagecodecs', 'numpy', 'pillow', 'python >=3.8', 'requests']",noarch,1660812992718.0,None-any-None,pyhd8ed1ab_0,2022-08-18 08:57:42.993000+00:00,829668491d0cf0c7261808e5c22cf53e,beffaf02362211a59210924edb8147fc303de54cf30c81e63c8ea0d5a52857a2,17505.0,conda-forge/napari-nasa-samples/0.0.5/noarch/napari-nasa-samples-0.0.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-nasa-samples/0.0.5/noarch/napari-nasa-samples-0.0.5-pyhd8ed1ab_0.tar.bz2,conda,0.0.5,conda-forge,['main'],public,,0.2.1,napari-nasa-samples.messier_101,Messier 101,napari_nasa_samples._hubble_messier_101:make_sample_data,,,,2.1,napari-nasa-samples,0.0.5,,This napari plugin provides sample datasets from NASA.,"# napari-nasa-samples +",text/markdown,https://github.com/jookuma/napari-napari,Jordao Bragantini,jordao.bragantini@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/jookuma/napari-napari/issues', 'Documentation, https://github.com/jookuma/napari-napari#README.md', 'Source Code, https://github.com/jookuma/napari-napari', 'User Support, https://github.com/jookuma/napari-napari/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-napari.napari,napari,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +260,napari-nasa-samples,0.0.5,NASA sample images,This napari plugin provides sample datasets from NASA.,Loic A. Royer,MPL-2.0,https://github.com/royerloic/napari-nasa-samples,62fdff097a1e7124db3bf3a7,['conda'],,https://github.com/royerloic/napari-nasa-samples,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-nasa-samples,http://api.anaconda.org/packages/conda-forge/napari-nasa-samples,http://anaconda.org/conda-forge/napari-nasa-samples,['0.0.5'],0.0.5,0.0.5,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.5,conda-forge/napari-nasa-samples/0.0.5,1.0,0.0,2022-08-18 08:57:42.635000+00:00,2023-06-18 08:42:20.303000+00:00,conda,noarch/napari-nasa-samples-0.0.5-pyhd8ed1ab_0.tar.bz2,0.0,MPL-2.0,False,python,"['imagecodecs', 'numpy', 'pillow', 'python >=3.8', 'requests']",noarch,1660812992718.0,None-any-None,pyhd8ed1ab_0,2022-08-18 08:57:42.993000+00:00,829668491d0cf0c7261808e5c22cf53e,beffaf02362211a59210924edb8147fc303de54cf30c81e63c8ea0d5a52857a2,17505.0,conda-forge/napari-nasa-samples/0.0.5/noarch/napari-nasa-samples-0.0.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-nasa-samples/0.0.5/noarch/napari-nasa-samples-0.0.5-pyhd8ed1ab_0.tar.bz2,conda,0.0.5,conda-forge,['main'],public,,0.2.1,napari-nasa-samples.messier_101,Messier 101,napari_nasa_samples._hubble_messier_101:make_sample_data,,,,2.1,napari-nasa-samples,0.0.5,,This napari plugin provides sample datasets from NASA.,"# napari-nasa-samples [![License Mozilla Public License 2.0](https://img.shields.io/pypi/l/napari-nasa-samples.svg?color=green)](https://github.com/royerlab/napari-nasa-samples/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-nasa-samples.svg?color=green)](https://pypi.org/project/napari-nasa-samples) @@ -26672,8 +27746,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/royerloic/napari-nasa-samples,Loic A. Royer,royerloic@gmail.com,MPL-2.0,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Mozilla Public License 2.0 (MPL 2.0)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'requests', 'pillow', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/royerloic/napari-nasa-samples/issues', 'Documentation, https://github.com/royerloic/napari-nasa-samples#README.md', 'Source Code, https://github.com/royerloic/napari-nasa-samples', 'User Support, https://github.com/royerloic/napari-nasa-samples/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-nasa-samples.pillars_of_creation,Pillars of Creation,napari_nasa_samples._hubble_pillars_of_creation:make_sample_data,napari-nasa-samples.large_magellanic_cloud,Large Magellanic Cloud,napari_nasa_samples._hubble_lmc:make_sample_data,napari-nasa-samples.cosmic_cliffs,Cosmic Cliffs,napari_nasa_samples._jwst_cosmic_cliffs:make_sample_data,,,,,,,,,,,,,napari-nasa-samples.smacs_0723,Deep Field SMACS 0723,napari_nasa_samples._jwst_smacs_0723:make_sample_data,,,,,,,,napari-nasa-samples.messier_101,messier_101,"Messier 101, Hubble",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-nasa-samples.pillars_of_creation,pillars_of_creation,"Pillars of Creation, Hubble",napari-nasa-samples.stephans_quintet,Stephan's Quintet (NIRCam and MIRI),napari_nasa_samples._jwst_stephans_quintet:make_sample_data,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-nasa-samples.southern_ring_nebula,Southern Ring Nebula (NIRCam Image),napari_nasa_samples._jwst_southern_ring_nebula:make_sample_data,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-nasa-samples.large_magellanic_cloud,large_magellanic_cloud,"Large Magellanic Cloud, Hubble" -250,napari-nD-annotator,0.2.3,Annotation Toolbox,A toolbox for annotating objects one by one in nD,"David Bauer, Jozsef Molnar, Dominik Hirling",BSD-3-Clause,,62cc02569aac3c40e412874c,['conda'],,https://github.com/bauerdavid/napari-nD-annotator,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-nd-annotator,http://api.anaconda.org/packages/conda-forge/napari-nd-annotator,http://anaconda.org/conda-forge/napari-nd-annotator,"['0.0.4', '0.0.7']",0.0.7,0.0.7,['noarch'],4.0,,['pyhd8ed1ab_0'],0.0.4,conda-forge/napari-nd-annotator/0.0.4,1.0,0.0,2022-07-11 10:58:24.648000+00:00,2023-06-18 08:42:03.460000+00:00,conda,noarch/napari-nd-annotator-0.0.4-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib-base', 'napari 0.4.15', 'numpy', 'opencv', 'python >=3.8', 'qtpy', 'vispy']",noarch,1657536959394.0,None-any-None,pyhd8ed1ab_0,2022-07-11 10:58:28.803000+00:00,4859361a9456e1d8bdaf59a411e03753,None,53055.0,conda-forge/napari-nd-annotator/0.0.4/noarch/napari-nd-annotator-0.0.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-nd-annotator/0.0.4/noarch/napari-nd-annotator-0.0.4-pyhd8ed1ab_0.tar.bz2,conda,0.0.4,conda-forge,['main'],public,,0.2.1,napari-nD-annotator.annotator_widget,Annotation Toolbox,napari_nd_annotator:AnnotatorWidget,,,,2.1,napari-nD-annotator,0.2.3,,A toolbox for annotating objects one by one in nD,"# napari-nD-annotator +",text/markdown,https://github.com/royerloic/napari-nasa-samples,Loic A. Royer,royerloic@gmail.com,MPL-2.0,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Mozilla Public License 2.0 (MPL 2.0)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'requests', 'pillow', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/royerloic/napari-nasa-samples/issues', 'Documentation, https://github.com/royerloic/napari-nasa-samples#README.md', 'Source Code, https://github.com/royerloic/napari-nasa-samples', 'User Support, https://github.com/royerloic/napari-nasa-samples/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-nasa-samples.pillars_of_creation,Pillars of Creation,napari_nasa_samples._hubble_pillars_of_creation:make_sample_data,napari-nasa-samples.large_magellanic_cloud,Large Magellanic Cloud,napari_nasa_samples._hubble_lmc:make_sample_data,napari-nasa-samples.cosmic_cliffs,Cosmic Cliffs,napari_nasa_samples._jwst_cosmic_cliffs:make_sample_data,,,,,,,,,,,,,napari-nasa-samples.smacs_0723,Deep Field SMACS 0723,napari_nasa_samples._jwst_smacs_0723:make_sample_data,,,,,,,,napari-nasa-samples.messier_101,messier_101,"Messier 101, Hubble",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-nasa-samples.pillars_of_creation,pillars_of_creation,"Pillars of Creation, Hubble",napari-nasa-samples.stephans_quintet,Stephan's Quintet (NIRCam and MIRI),napari_nasa_samples._jwst_stephans_quintet:make_sample_data,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-nasa-samples.southern_ring_nebula,Southern Ring Nebula (NIRCam Image),napari_nasa_samples._jwst_southern_ring_nebula:make_sample_data,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-nasa-samples.large_magellanic_cloud,large_magellanic_cloud,"Large Magellanic Cloud, Hubble" +261,napari-nD-annotator,0.2.3,Annotation Toolbox,A toolbox for annotating objects one by one in nD,"David Bauer, Jozsef Molnar, Dominik Hirling",BSD-3-Clause,,62cc02569aac3c40e412874c,['conda'],,https://github.com/bauerdavid/napari-nD-annotator,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-nd-annotator,http://api.anaconda.org/packages/conda-forge/napari-nd-annotator,http://anaconda.org/conda-forge/napari-nd-annotator,"['0.0.4', '0.0.7', '0.2.3']",0.2.3,0.0.7,"['linux-64', 'noarch', 'osx-64', 'osx-arm64', 'win-64']",114.0,,"['py310h1d90656_0', 'py310h265591f_0', 'py310h82564ac_0', 'py310h9274f97_0', 'py310h9fd543b_0', 'py310hc18db52_0', 'py310hf6e08b6_0', 'py311h7c2fe40_0', 'py311ha540871_0', 'py311hb31adba_0', 'py311hb96ea3a_0', 'py311hebdfa2d_0', 'py311hed9b23f_0', 'py311hfa30c88_0', 'py312h0147cc7_0', 'py312h2507484_0', 'py312h2e396b9_0', 'py312h9a170e1_0', 'py312ha594dfa_0', 'py312hafa5229_0', 'py312hbfc80d1_0', 'py38ha02b945_0', 'py38haa4b4a7_0', 'py38he8dda6a_0', 'py39h1bc12e9_0', 'py39h4617dc3_0', 'py39h513bf77_0', 'py39h5cdfbc1_0', 'py39h614b560_0', 'py39h6a06737_0', 'py39haacdf10_0', 'pyhd8ed1ab_0']",0.0.4,conda-forge/napari-nd-annotator/0.0.4,1.0,0.0,2022-07-11 10:58:24.648000+00:00,2024-12-03 07:46:51.229000+00:00,conda,noarch/napari-nd-annotator-0.0.4-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib-base', 'napari 0.4.15', 'numpy', 'opencv', 'python >=3.8', 'qtpy', 'vispy']",noarch,1657536959394.0,None-any-None,pyhd8ed1ab_0,2022-07-11 10:58:28.803000+00:00,4859361a9456e1d8bdaf59a411e03753,None,53055.0,conda-forge/napari-nd-annotator/0.0.4/noarch/napari-nd-annotator-0.0.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-nd-annotator/0.0.4/noarch/napari-nd-annotator-0.0.4-pyhd8ed1ab_0.tar.bz2,conda,0.0.4,conda-forge,['main'],public,,0.2.1,napari-nD-annotator.annotator_widget,Annotation Toolbox,napari_nd_annotator:AnnotatorWidget,,,,2.1,napari-nD-annotator,0.2.3,,A toolbox for annotating objects one by one in nD,"# napari-nD-annotator [![License BSD-3](https://img.shields.io/pypi/l/napari-nD-annotator.svg?color=green)](https://github.com/bauerdavid/napari-nD-annotator/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-nD-annotator.svg?color=green)](https://pypi.org/project/napari-nD-annotator) @@ -26871,8 +27945,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [file an issue]: https://github.com/bauerdavid/napari-nD-annotator/issues/new/choose [napari-bbox]: https://github.com/bauerdavid/napari-bbox [minimal-surface]: https://pypi.org/project/minimal-surface -",text/markdown,,"David Bauer, Jozsef Molnar, Dominik Hirling",dbauer@brc.hu,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: C', 'Programming Language :: Cython', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Programming Language :: Python :: Implementation :: CPython', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['numpy', 'magicgui', 'qtpy', 'opencv-python', 'matplotlib', 'napari >=0.4.11', 'scikit-image >=0.19', 'SimpleITK', ""napari-bbox ; extra == 'all'"", ""minimal-surface ; extra == 'all'"", ""napari-bbox ; extra == 'bbox'"", ""minimal-surface ; extra == 'ms'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""numpy ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/bauerdavid/napari-nD-annotator/issues', 'Documentation, https://github.com/bauerdavid/napari-nD-annotator/blob/main/README.md', 'Source Code, https://github.com/bauerdavid/napari-nD-annotator', 'User Support, https://github.com/bauerdavid/napari-nD-annotator/issues']","['all', 'bbox', 'ms', 'testing']",False,0.0.7,conda-forge/napari-nd-annotator/0.0.7,,,,,conda,noarch/napari-nd-annotator-0.0.7-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib-base', 'napari 0.4.15', 'numpy', 'opencv', 'python >=3.8', 'qtpy', 'vispy']",pyhd8ed1ab_0,1657559140324.0,None-any-None,noarch,2022-07-11 17:08:08.660000+00:00,7fda92fcd578b1445618689159a0df7d,None,54095.0,conda-forge/napari-nd-annotator/0.0.7/noarch/napari-nd-annotator-0.0.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-nd-annotator/0.0.7/noarch/napari-nd-annotator-0.0.7-pyhd8ed1ab_0.tar.bz2,conda,0.0.7,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-nD-annotator.interpolation_widget,Slice Interpolation,napari_nd_annotator:InterpolationWidget,napari-nD-annotator.object_list_widget,Object List,napari_nd_annotator:ListWidgetBB,,,,napari-nD-annotator.annotator_widget,Annotation Toolbox,False,napari-nD-annotator.interpolation_widget,Slice Interpolator,False,napari-nD-annotator.object_list_widget,Object List,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -251,napari-nd-cropper,0.1.3,napari-nd-cropper,A napari plugin in order to crop nd-images via different modes,"Marc Boucsein, Robin Koch",BSD-3-Clause,https://github.com/MBPhys/napari-nd-cropper,6224fbc639552dcb599bec04,['conda'],,https://github.com/MBPhys/napari-nd-cropper,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-nd-cropper,http://api.anaconda.org/packages/conda-forge/napari-nd-cropper,http://anaconda.org/conda-forge/napari-nd-cropper,['0.1.3'],0.1.3,0.1.3,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.3,conda-forge/napari-nd-cropper/0.1.3,1.0,0.0,2022-03-06 18:21:09.931000+00:00,2023-06-18 08:40:58.846000+00:00,conda,noarch/napari-nd-cropper-0.1.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari >=0.4.12', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'python >=3.9', 'qtpy', 'superqt']",noarch,1646590742753.0,None-any-None,pyhd8ed1ab_0,2022-03-06 18:21:10.273000+00:00,c494533cb423a519c87200265ccd6615,None,11471.0,conda-forge/napari-nd-cropper/0.1.3/noarch/napari-nd-cropper-0.1.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-nd-cropper/0.1.3/noarch/napari-nd-cropper-0.1.3-pyhd8ed1ab_0.tar.bz2,conda,0.1.3,conda-forge,['main'],public,,0.2.1,napari-nd-cropper.nd_Cropper,nd_Cropper,napari_nd_cropper._dock_widget:nd_Cropper,,,,2.1,napari-nd-cropper,0.1.3,['UNKNOWN'],A napari plugin in order to crop nd-images via different modes,"# napari-nd-cropper +",text/markdown,,"David Bauer, Jozsef Molnar, Dominik Hirling",dbauer@brc.hu,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: C', 'Programming Language :: Cython', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Programming Language :: Python :: Implementation :: CPython', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['numpy', 'magicgui', 'qtpy', 'opencv-python', 'matplotlib', 'napari >=0.4.11', 'scikit-image >=0.19', 'SimpleITK', ""napari-bbox ; extra == 'all'"", ""minimal-surface ; extra == 'all'"", ""napari-bbox ; extra == 'bbox'"", ""minimal-surface ; extra == 'ms'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""numpy ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/bauerdavid/napari-nD-annotator/issues', 'Documentation, https://github.com/bauerdavid/napari-nD-annotator/blob/main/README.md', 'Source Code, https://github.com/bauerdavid/napari-nD-annotator', 'User Support, https://github.com/bauerdavid/napari-nD-annotator/issues']","['all', 'bbox', 'ms', 'testing']",False,0.0.7,conda-forge/napari-nd-annotator/0.0.7,0.2.3,conda-forge/napari-nd-annotator/0.2.3,,,conda,noarch/napari-nd-annotator-0.0.7-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib-base', 'napari 0.4.15', 'numpy', 'opencv', 'python >=3.8', 'qtpy', 'vispy']",pyhd8ed1ab_0,1657559140324.0,None-any-None,noarch,2022-07-11 17:08:08.660000+00:00,7fda92fcd578b1445618689159a0df7d,None,54095.0,conda-forge/napari-nd-annotator/0.0.7/noarch/napari-nd-annotator-0.0.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-nd-annotator/0.0.7/noarch/napari-nd-annotator-0.0.7-pyhd8ed1ab_0.tar.bz2,conda,0.0.7,conda-forge,['main'],conda,linux-64/napari-nd-annotator-0.2.3-py311hfa30c88_0.conda,0.0,BSD-3-Clause,True,,"['__glibc >=2.17,<3.0.a0', 'libgcc >=12', 'libstdcxx >=12', 'magicgui', 'matplotlib-base', 'napari >=0.4.11', 'numpy >=1.23.5,<2.0a0', 'opencv', 'python >=3.11,<3.12.0a0', 'python_abi 3.11.* *_cp311', 'qtpy', 'scikit-image >=0.19', 'simpleitk', 'vispy']",linux-64,1731929778048.0,x86_64-any-linux,py311hfa30c88_0,2024-11-18 11:38:44.637000+00:00,30633ddb076aa45cfd720a7035e99485,539431cb8d40e64e045e48106488e820657b64f22edbaf3059c0f385be089b47,798435.0,conda-forge/napari-nd-annotator/0.2.3/linux-64/napari-nd-annotator-0.2.3-py311hfa30c88_0.conda,//api.anaconda.org/download/conda-forge/napari-nd-annotator/0.2.3/linux-64/napari-nd-annotator-0.2.3-py311hfa30c88_0.conda,conda,0.2.3,conda-forge,['main'],conda,linux-64/napari-nd-annotator-0.2.3-py312h2e396b9_0.conda,x86_64-any-linux,True,linux-64,py312h2e396b9_0,0.0,"['__glibc >=2.17,<3.0.a0', 'libgcc >=12', 'libstdcxx >=12', 'magicgui', 'matplotlib-base', 'napari >=0.4.11', 'numpy >=1.26.4,<2.0a0', 'opencv', 'python >=3.12,<3.13.0a0', 'python_abi 3.12.* *_cp312', 'qtpy', 'scikit-image >=0.19', 'simpleitk', 'vispy']",BSD-3-Clause,,1731929792726.0,2024-11-18 11:39:12.876000+00:00,9ddf6e9f033dbcc64ba4ad6c857a477c,f0537fe0f179f0f97bd1d7df2e591b1ac48e2fd777addbd978e8d5d3852a4644,782386.0,conda-forge/napari-nd-annotator/0.2.3/linux-64/napari-nd-annotator-0.2.3-py312h2e396b9_0.conda,//api.anaconda.org/download/conda-forge/napari-nd-annotator/0.2.3/linux-64/napari-nd-annotator-0.2.3-py312h2e396b9_0.conda,conda,0.2.3,conda-forge,['main'],,napari-nD-annotator.interpolation_widget,Slice Interpolation,napari_nd_annotator:InterpolationWidget,napari-nD-annotator.object_list_widget,Object List,napari_nd_annotator:ListWidgetBB,,,,napari-nD-annotator.annotator_widget,Annotation Toolbox,False,napari-nD-annotator.interpolation_widget,Slice Interpolator,False,napari-nD-annotator.object_list_widget,Object List,False,,,,,,,,,,,,,,,,,,,,,,,conda,osx-64/napari-nd-annotator-0.2.3-py312hafa5229_0.conda,0.0,BSD-3-Clause,True,,"['__osx >=10.13', 'libcxx >=16', 'magicgui', 'matplotlib-base', 'napari >=0.4.11', 'numpy >=1.26.4,<2.0a0', 'opencv', 'python >=3.12,<3.13.0a0', 'python_abi 3.12.* *_cp312', 'qtpy', 'scikit-image >=0.19', 'simpleitk', 'vispy']",osx-64,1731929837032.0,x86_64-any-darwin,py312hafa5229_0,2024-11-18 11:40:11.398000+00:00,e559e58fd6fa7d704d6a611311181a05,5f19fcb8bcf14419e1a900a44f17d33e2ac0b6d3dfc6c10371c9eca1df3b970f,726994.0,conda-forge/napari-nd-annotator/0.2.3/osx-64/napari-nd-annotator-0.2.3-py312hafa5229_0.conda,//api.anaconda.org/download/conda-forge/napari-nd-annotator/0.2.3/osx-64/napari-nd-annotator-0.2.3-py312hafa5229_0.conda,conda,0.2.3,conda-forge,['main'],conda,osx-64/napari-nd-annotator-0.2.3-py38ha02b945_0.conda,0.0,BSD-3-Clause,True,,"['__osx >=10.13', 'libcxx >=16', 'magicgui', 'matplotlib-base', 'napari >=0.4.11', 'numpy >=1.22.4,<2.0a0', 'opencv', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'qtpy', 'scikit-image >=0.19', 'simpleitk', 'vispy']",osx-64,1731929856989.0,x86_64-any-darwin,py38ha02b945_0,2024-11-18 11:40:28.591000+00:00,d020470f32e752c8a1f66eed96d8555e,6c3b1ff32ed6efe6b1e2c896ce2e3288a29671a56b84a610bdf24eca7fc60963,670767.0,conda-forge/napari-nd-annotator/0.2.3/osx-64/napari-nd-annotator-0.2.3-py38ha02b945_0.conda,//api.anaconda.org/download/conda-forge/napari-nd-annotator/0.2.3/osx-64/napari-nd-annotator-0.2.3-py38ha02b945_0.conda,conda,0.2.3,conda-forge,['main'],conda,linux-64/napari-nd-annotator-0.2.3-py38haa4b4a7_0.conda,x86_64-any-linux,True,linux-64,py38haa4b4a7_0,0.0,"['__glibc >=2.17,<3.0.a0', 'libgcc >=12', 'libstdcxx >=12', 'magicgui', 'matplotlib-base', 'napari >=0.4.11', 'numpy >=1.22.4,<2.0a0', 'opencv', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'qtpy', 'scikit-image >=0.19', 'simpleitk', 'vispy']",BSD-3-Clause,,1731929862995.0,2024-11-18 11:40:39.666000+00:00,64bf4e29a7d3b6a9fce21210b010edde,b27d8b6460132d8d83b08f3c41fb60c4fdb845079aa0d1a6b8f40226840a1daa,734136.0,conda-forge/napari-nd-annotator/0.2.3/linux-64/napari-nd-annotator-0.2.3-py38haa4b4a7_0.conda,//api.anaconda.org/download/conda-forge/napari-nd-annotator/0.2.3/linux-64/napari-nd-annotator-0.2.3-py38haa4b4a7_0.conda,conda,0.2.3,conda-forge,['main'],,,,,,,,,,,conda,osx-64/napari-nd-annotator-0.2.3-py310h9274f97_0.conda,0.0,BSD-3-Clause,True,,"['__osx >=10.13', 'libcxx >=16', 'magicgui', 'matplotlib-base', 'napari >=0.4.11', 'numpy >=1.22.4,<2.0a0', 'opencv', 'python >=3.10,<3.11.0a0', 'python_abi 3.10.* *_cp310', 'qtpy', 'scikit-image >=0.19', 'simpleitk', 'vispy']",osx-64,1731929866080.0,x86_64-any-darwin,py310h9274f97_0,2024-11-18 11:40:58.050000+00:00,1ade8df9d494110f40299c967917d6df,f8ff90144e357c13decae1f10a8db3d71415a9d3bb3d42997da346fc7f88579d,674723.0,conda-forge/napari-nd-annotator/0.2.3/osx-64/napari-nd-annotator-0.2.3-py310h9274f97_0.conda,//api.anaconda.org/download/conda-forge/napari-nd-annotator/0.2.3/osx-64/napari-nd-annotator-0.2.3-py310h9274f97_0.conda,conda,0.2.3,conda-forge,['main'],conda,osx-64/napari-nd-annotator-0.2.3-py39h614b560_0.conda,x86_64-any-darwin,True,osx-64,py39h614b560_0,0.0,"['__osx >=10.13', 'libcxx >=16', 'magicgui', 'matplotlib-base', 'napari >=0.4.11', 'numpy >=1.22.4,<2.0a0', 'opencv', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'qtpy', 'scikit-image >=0.19', 'simpleitk', 'vispy']",BSD-3-Clause,,1731929879699.0,2024-11-18 11:40:58.587000+00:00,12a951cf22905e4f69f1a60ce3eec599,b7705bc869c6cd0edc1c77a244b35be1247fcf188dd87d5e6e7553474f44ea5f,675070.0,conda-forge/napari-nd-annotator/0.2.3/osx-64/napari-nd-annotator-0.2.3-py39h614b560_0.conda,//api.anaconda.org/download/conda-forge/napari-nd-annotator/0.2.3/osx-64/napari-nd-annotator-0.2.3-py39h614b560_0.conda,conda,0.2.3,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,conda,linux-64/napari-nd-annotator-0.2.3-py39h5cdfbc1_0.conda,x86_64-any-linux,True,linux-64,py39h5cdfbc1_0,0.0,"['__glibc >=2.17,<3.0.a0', 'libgcc >=12', 'libstdcxx >=12', 'magicgui', 'matplotlib-base', 'napari >=0.4.11', 'numpy >=1.22.4,<2.0a0', 'opencv', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'qtpy', 'scikit-image >=0.19', 'simpleitk', 'vispy']",BSD-3-Clause,,1731929872221.0,2024-11-18 11:41:29.443000+00:00,d00b171f832391b039f09a72dc36d8fd,b6150f42de42104f3c172c4cc4586fefb13fefdcc59edb8225c5f141bcdbd883,730357.0,conda-forge/napari-nd-annotator/0.2.3/linux-64/napari-nd-annotator-0.2.3-py39h5cdfbc1_0.conda,//api.anaconda.org/download/conda-forge/napari-nd-annotator/0.2.3/linux-64/napari-nd-annotator-0.2.3-py39h5cdfbc1_0.conda,conda,0.2.3,conda-forge,['main'],conda,linux-64/napari-nd-annotator-0.2.3-py310h9fd543b_0.conda,x86_64-any-linux,True,linux-64,py310h9fd543b_0,0.0,"['__glibc >=2.17,<3.0.a0', 'libgcc >=12', 'libstdcxx >=12', 'magicgui', 'matplotlib-base', 'napari >=0.4.11', 'numpy >=1.22.4,<2.0a0', 'opencv', 'python >=3.10,<3.11.0a0', 'python_abi 3.10.* *_cp310', 'qtpy', 'scikit-image >=0.19', 'simpleitk', 'vispy']",BSD-3-Clause,,1731929875145.0,2024-11-18 11:41:37.691000+00:00,b1faf04e6078debc8a13f31fdb513e0d,fe9578a163449375c39b6109400f0ff06aed971cde3c5379ac885ee170fdbc08,732798.0,conda-forge/napari-nd-annotator/0.2.3/linux-64/napari-nd-annotator-0.2.3-py310h9fd543b_0.conda,//api.anaconda.org/download/conda-forge/napari-nd-annotator/0.2.3/linux-64/napari-nd-annotator-0.2.3-py310h9fd543b_0.conda,conda,0.2.3,conda-forge,['main'],,,conda,osx-64/napari-nd-annotator-0.2.3-py311h7c2fe40_0.conda,x86_64-any-darwin,True,osx-64,py311h7c2fe40_0,0.0,"['__osx >=10.13', 'libcxx >=16', 'magicgui', 'matplotlib-base', 'napari >=0.4.11', 'numpy >=1.23.5,<2.0a0', 'opencv', 'python >=3.11,<3.12.0a0', 'python_abi 3.11.* *_cp311', 'qtpy', 'scikit-image >=0.19', 'simpleitk', 'vispy']",BSD-3-Clause,1731929935829.0,2024-11-18 11:42:38.854000+00:00,e7f67618d015fd7e85a3e3c9a47453d6,729ec7b4e2ea353241010f223dfc5d3898d74597efb6b673cdb878e118c3248e,737881.0,conda-forge/napari-nd-annotator/0.2.3/osx-64/napari-nd-annotator-0.2.3-py311h7c2fe40_0.conda,//api.anaconda.org/download/conda-forge/napari-nd-annotator/0.2.3/osx-64/napari-nd-annotator-0.2.3-py311h7c2fe40_0.conda,conda,0.2.3,conda-forge,['main'],,,conda,win-64/napari-nd-annotator-0.2.3-py39haacdf10_0.conda,x86_64-any-win32,True,win-64,py39haacdf10_0,0.0,"['magicgui', 'matplotlib-base', 'napari >=0.4.11', 'numpy >=1.22.4,<2.0a0', 'opencv', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'qtpy', 'scikit-image >=0.19', 'simpleitk', 'ucrt >=10.0.20348.0', 'vc >=14.2,<15', 'vc14_runtime >=14.29.30139', 'vispy']",BSD-3-Clause,1731930280262.0,2024-11-18 11:55:03.681000+00:00,d454a49f41473a7c55242d50d4f48483,310a633678f0a6f2a39e94c28f716fdc781e97ca01dc09f995f33573d18cfd59,633784.0,conda-forge/napari-nd-annotator/0.2.3/win-64/napari-nd-annotator-0.2.3-py39haacdf10_0.conda,//api.anaconda.org/download/conda-forge/napari-nd-annotator/0.2.3/win-64/napari-nd-annotator-0.2.3-py39haacdf10_0.conda,conda,0.2.3,conda-forge,['main'],conda,win-64/napari-nd-annotator-0.2.3-py312h2507484_0.conda,x86_64-any-win32,True,win-64,py312h2507484_0,0.0,"['magicgui', 'matplotlib-base', 'napari >=0.4.11', 'numpy >=1.26.4,<2.0a0', 'opencv', 'python >=3.12,<3.13.0a0', 'python_abi 3.12.* *_cp312', 'qtpy', 'scikit-image >=0.19', 'simpleitk', 'ucrt >=10.0.20348.0', 'vc >=14.2,<15', 'vc14_runtime >=14.29.30139', 'vispy']",BSD-3-Clause,2024-11-18 11:55:38.477000+00:00,3113d7d8c59a454fc0348901697d1deb,093d32be31148f83eabaef9eb74c816a4723463efa85e20d7061f8f132d1d018,685307.0,conda-forge/napari-nd-annotator/0.2.3/win-64/napari-nd-annotator-0.2.3-py312h2507484_0.conda,//api.anaconda.org/download/conda-forge/napari-nd-annotator/0.2.3/win-64/napari-nd-annotator-0.2.3-py312h2507484_0.conda,conda,0.2.3,conda-forge,['main'],,, +262,napari-nd-cropper,0.1.3,napari-nd-cropper,A napari plugin in order to crop nd-images via different modes,"Marc Boucsein, Robin Koch",BSD-3-Clause,https://github.com/MBPhys/napari-nd-cropper,6224fbc639552dcb599bec04,['conda'],,https://github.com/MBPhys/napari-nd-cropper,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-nd-cropper,http://api.anaconda.org/packages/conda-forge/napari-nd-cropper,http://anaconda.org/conda-forge/napari-nd-cropper,['0.1.3'],0.1.3,0.1.3,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.3,conda-forge/napari-nd-cropper/0.1.3,1.0,0.0,2022-03-06 18:21:09.931000+00:00,2023-06-18 08:40:58.846000+00:00,conda,noarch/napari-nd-cropper-0.1.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari >=0.4.12', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'python >=3.9', 'qtpy', 'superqt']",noarch,1646590742753.0,None-any-None,pyhd8ed1ab_0,2022-03-06 18:21:10.273000+00:00,c494533cb423a519c87200265ccd6615,None,11471.0,conda-forge/napari-nd-cropper/0.1.3/noarch/napari-nd-cropper-0.1.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-nd-cropper/0.1.3/noarch/napari-nd-cropper-0.1.3-pyhd8ed1ab_0.tar.bz2,conda,0.1.3,conda-forge,['main'],public,,0.2.1,napari-nd-cropper.nd_Cropper,nd_Cropper,napari_nd_cropper._dock_widget:nd_Cropper,,,,2.1,napari-nd-cropper,0.1.3,['UNKNOWN'],A napari plugin in order to crop nd-images via different modes,"# napari-nd-cropper [![License](https://img.shields.io/pypi/l/napari-medical-image-formats.svg?color=green)](https://github.com/MBPhys/napari-nd-cropper/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-nd-cropper.svg?color=green)](https://pypi.org/project/napari-nd-cropper) @@ -26926,8 +28000,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/MBPhys/napari-nd-cropper,"Marc Boucsein, Robin Koch",,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari-tools-menu', 'qtpy', 'superqt', 'magicgui']",>=3.9,"['Bug Tracker, https://github.com/MBPhys/napari-nd-cropper/issues', 'Documentation, https://github.com/MBPhys/napari-nd-cropper', 'Source Code, https://github.com/MBPhys/napari-nd-cropper', 'User Support, https://github.com/MBPhys/napari-nd-cropper/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-nd-cropper.nd_Cropper,nd_Cropper,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -252,napari-nd2-folder-viewer,0.0.13,napari nd2 folder viewer,Look through separate nd2 files in one viewer.,Niklas Netter,BSD-3-Clause,https://github.com/gatoniel/napari-nd2-folder-viewer,62fe65590d2e105a8a228c6e,['conda'],,https://github.com/gatoniel/napari-nd2-folder-viewer,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-nd2-folder-viewer,http://api.anaconda.org/packages/conda-forge/napari-nd2-folder-viewer,http://anaconda.org/conda-forge/napari-nd2-folder-viewer,"['0.0.2', '0.0.3', '0.0.7', '0.0.9', '0.0.11', '0.0.10', '0.0.12', '0.0.13']",0.0.13,0.0.13,['noarch'],10.0,,['pyhd8ed1ab_0'],0.0.2,conda-forge/napari-nd2-folder-viewer/0.0.2,1.0,0.0,2022-08-18 16:14:15.451000+00:00,2023-06-18 08:42:20.654000+00:00,conda,noarch/napari-nd2-folder-viewer-0.0.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core', 'desert', 'julian', 'magicgui', 'marshmallow', 'napari', 'nd2', 'numpy', 'openpyxl', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy']",noarch,1660839125889.0,None-any-None,pyhd8ed1ab_0,2022-08-18 16:14:15.846000+00:00,3766b8315edc76fe87b3f1a7a2fcfa1b,None,12788.0,conda-forge/napari-nd2-folder-viewer/0.0.2/noarch/napari-nd2-folder-viewer-0.0.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-nd2-folder-viewer/0.0.2/noarch/napari-nd2-folder-viewer-0.0.2-pyhd8ed1ab_0.tar.bz2,conda,0.0.2,conda-forge,['main'],public,,0.2.1,napari-nd2-folder-viewer.make_qwidget,Make Widget to load folder,napari_nd2_folder_viewer._widget:LoadWidget,,,,2.1,napari-nd2-folder-viewer,0.0.13,,Look through separate nd2 files in one viewer.,"# napari-nd2-folder-viewer +",text/markdown,https://github.com/MBPhys/napari-nd-cropper,"Marc Boucsein, Robin Koch",,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari-tools-menu', 'qtpy', 'superqt', 'magicgui']",>=3.9,"['Bug Tracker, https://github.com/MBPhys/napari-nd-cropper/issues', 'Documentation, https://github.com/MBPhys/napari-nd-cropper', 'Source Code, https://github.com/MBPhys/napari-nd-cropper', 'User Support, https://github.com/MBPhys/napari-nd-cropper/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-nd-cropper.nd_Cropper,nd_Cropper,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +263,napari-nd2-folder-viewer,0.0.13,napari nd2 folder viewer,Look through separate nd2 files in one viewer.,Niklas Netter,BSD-3-Clause,https://github.com/gatoniel/napari-nd2-folder-viewer,62fe65590d2e105a8a228c6e,['conda'],,https://github.com/gatoniel/napari-nd2-folder-viewer,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-nd2-folder-viewer,http://api.anaconda.org/packages/conda-forge/napari-nd2-folder-viewer,http://anaconda.org/conda-forge/napari-nd2-folder-viewer,"['0.0.2', '0.0.3', '0.0.7', '0.0.9', '0.0.11', '0.0.10', '0.0.12', '0.0.13']",0.0.13,0.0.13,['noarch'],10.0,,['pyhd8ed1ab_0'],0.0.2,conda-forge/napari-nd2-folder-viewer/0.0.2,1.0,0.0,2022-08-18 16:14:15.451000+00:00,2023-06-18 08:42:20.654000+00:00,conda,noarch/napari-nd2-folder-viewer-0.0.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core', 'desert', 'julian', 'magicgui', 'marshmallow', 'napari', 'nd2', 'numpy', 'openpyxl', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy']",noarch,1660839125889.0,None-any-None,pyhd8ed1ab_0,2022-08-18 16:14:15.846000+00:00,3766b8315edc76fe87b3f1a7a2fcfa1b,None,12788.0,conda-forge/napari-nd2-folder-viewer/0.0.2/noarch/napari-nd2-folder-viewer-0.0.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-nd2-folder-viewer/0.0.2/noarch/napari-nd2-folder-viewer-0.0.2-pyhd8ed1ab_0.tar.bz2,conda,0.0.2,conda-forge,['main'],public,,0.2.1,napari-nd2-folder-viewer.make_qwidget,Make Widget to load folder,napari_nd2_folder_viewer._widget:LoadWidget,,,,2.1,napari-nd2-folder-viewer,0.0.13,,Look through separate nd2 files in one viewer.,"# napari-nd2-folder-viewer [![License BSD-3](https://img.shields.io/pypi/l/napari-nd2-folder-viewer.svg?color=green)](https://github.com/gatoniel/napari-nd2-folder-viewer/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-nd2-folder-viewer.svg?color=green)](https://pypi.org/project/napari-nd2-folder-viewer) @@ -26994,8 +28068,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/gatoniel/napari-nd2-folder-viewer,Niklas Netter,niknett@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'pyyaml', 'marshmallow', 'desert', 'nd2 (>=0.4.3)', 'dask', 'pandas', 'openpyxl', 'julian', 'napari-animation', 'scikit-learn', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/gatoniel/napari-nd2-folder-viewer/issues', 'Documentation, https://github.com/gatoniel/napari-nd2-folder-viewer#README.md', 'Source Code, https://github.com/gatoniel/napari-nd2-folder-viewer', 'User Support, https://github.com/gatoniel/napari-nd2-folder-viewer/issues']",['testing'],False,0.0.3,conda-forge/napari-nd2-folder-viewer/0.0.3,0.0.7,conda-forge/napari-nd2-folder-viewer/0.0.7,0.0.9,conda-forge/napari-nd2-folder-viewer/0.0.9,conda,noarch/napari-nd2-folder-viewer-0.0.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core', 'desert', 'julian', 'magicgui', 'marshmallow', 'napari', 'nd2', 'numpy', 'openpyxl', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy']",pyhd8ed1ab_0,1663625784870.0,None-any-None,noarch,2022-09-19 22:18:42.074000+00:00,ee0433d8fe5bdbd618e89036266a712c,None,12902.0,conda-forge/napari-nd2-folder-viewer/0.0.3/noarch/napari-nd2-folder-viewer-0.0.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-nd2-folder-viewer/0.0.3/noarch/napari-nd2-folder-viewer-0.0.3-pyhd8ed1ab_0.tar.bz2,conda,0.0.3,conda-forge,['main'],conda,noarch/napari-nd2-folder-viewer-0.0.7-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['dask-core', 'desert', 'julian', 'magicgui', 'marshmallow', 'napari', 'napari-animation', 'nd2', 'numpy', 'openpyxl', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-learn']",noarch,1670891147171.0,None-any-None,pyhd8ed1ab_0,2022-12-13 00:27:42.008000+00:00,984edb370338a9eb42ec972b1a62d18f,f735d0623713c570ea3b56d70fe74b6719787084212fa6546e9614fd94eaf51e,15502.0,conda-forge/napari-nd2-folder-viewer/0.0.7/noarch/napari-nd2-folder-viewer-0.0.7-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-nd2-folder-viewer/0.0.7/noarch/napari-nd2-folder-viewer-0.0.7-pyhd8ed1ab_0.conda,conda,0.0.7,conda-forge,['main'],conda,noarch/napari-nd2-folder-viewer-0.0.9-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['dask-core', 'desert', 'julian', 'magicgui', 'marshmallow', 'napari', 'napari-animation', 'nd2', 'numpy', 'openpyxl', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-learn']",BSD-3-Clause,python,1674071527030.0,2023-01-18 19:54:02.257000+00:00,292735bee992c45c5ca9201af67ecb1f,06b869a4b4e480ca4f995691f8cddb0a9b5157746e5a43f6592b7d7b5780b751,15922.0,conda-forge/napari-nd2-folder-viewer/0.0.9/noarch/napari-nd2-folder-viewer-0.0.9-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-nd2-folder-viewer/0.0.9/noarch/napari-nd2-folder-viewer-0.0.9-pyhd8ed1ab_0.conda,conda,0.0.9,conda-forge,['main'],,,,,,,,,,,napari-nd2-folder-viewer.make_qwidget,Load nd2 folder,False,,,,,,,,,,,,,,,,,,,,,,,0.0.11,conda-forge/napari-nd2-folder-viewer/0.0.11,0.0.10,conda-forge/napari-nd2-folder-viewer/0.0.10,0.0.12,conda-forge/napari-nd2-folder-viewer/0.0.12,conda,noarch/napari-nd2-folder-viewer-0.0.11-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['dask-core', 'desert', 'julian', 'magicgui', 'marshmallow', 'napari', 'napari-animation', 'nd2', 'numpy', 'openpyxl', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-learn']",noarch,1674503694235.0,None-any-None,pyhd8ed1ab_0,2023-01-23 19:56:47.559000+00:00,213aa5cbd086ab2189f9d90b79a5896e,867e0fb9af202ec86902392d7f9b2418cbda684029f1c298fcb24869859385ac,16339.0,conda-forge/napari-nd2-folder-viewer/0.0.11/noarch/napari-nd2-folder-viewer-0.0.11-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-nd2-folder-viewer/0.0.11/noarch/napari-nd2-folder-viewer-0.0.11-pyhd8ed1ab_0.conda,conda,0.0.11,conda-forge,['main'],conda,noarch/napari-nd2-folder-viewer-0.0.10-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['dask-core', 'desert', 'julian', 'magicgui', 'marshmallow', 'napari', 'napari-animation', 'nd2', 'numpy', 'openpyxl', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-learn']",noarch,1674503711381.0,None-any-None,pyhd8ed1ab_0,2023-01-23 19:56:49.210000+00:00,d0d86e7f2e1c7e01782ab90db9e559e7,ac1bcd6b315bae7e1f5dcc8506acf6c70cd09afd1c723f2b29967c56eb69abf9,16271.0,conda-forge/napari-nd2-folder-viewer/0.0.10/noarch/napari-nd2-folder-viewer-0.0.10-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-nd2-folder-viewer/0.0.10/noarch/napari-nd2-folder-viewer-0.0.10-pyhd8ed1ab_0.conda,conda,0.0.10,conda-forge,['main'],conda,noarch/napari-nd2-folder-viewer-0.0.12-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['dask-core', 'desert', 'julian', 'magicgui', 'marshmallow', 'napari', 'napari-animation', 'nd2', 'numpy', 'openpyxl', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-learn']",BSD-3-Clause,python,1674504268848.0,2023-01-23 20:05:59.603000+00:00,db5fe710267441b3be7e8fa6b743b880,6b68c171b6750a949e9eb04f2fb08b09534f8661d754070970e41aff43571eb1,16636.0,conda-forge/napari-nd2-folder-viewer/0.0.12/noarch/napari-nd2-folder-viewer-0.0.12-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-nd2-folder-viewer/0.0.12/noarch/napari-nd2-folder-viewer-0.0.12-pyhd8ed1ab_0.conda,conda,0.0.12,conda-forge,['main'],,,,,,,0.0.13,conda-forge/napari-nd2-folder-viewer/0.0.13,,,conda,noarch/napari-nd2-folder-viewer-0.0.13-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['dask-core', 'desert', 'julian', 'magicgui', 'marshmallow', 'napari', 'napari-animation', 'nd2', 'numpy', 'openpyxl', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-learn']",noarch,1682248817587.0,None-any-None,pyhd8ed1ab_0,2023-04-23 11:22:33.801000+00:00,579fe6d70fffc511f3419ef2922e746e,2d9dc0fc37d5032c316e76ac746ef193f887501efe7808eecaf22f8a1a84f774,17173.0,conda-forge/napari-nd2-folder-viewer/0.0.13/noarch/napari-nd2-folder-viewer-0.0.13-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-nd2-folder-viewer/0.0.13/noarch/napari-nd2-folder-viewer-0.0.13-pyhd8ed1ab_0.conda,conda,0.0.13,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -253,napari-ndev,0.8.2,neuralDev,A collection of widgets to process images from start to finish--focused on neural development.,Tim Monko,BSD-3-Clause,https://github.com/TimMonko/napari-ndev,6425bb366d688545034bcd92,['conda'],,https://github.com/TimMonko/napari-ndev,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-ndev,http://api.anaconda.org/packages/conda-forge/napari-ndev,http://anaconda.org/conda-forge/napari-ndev,"['0.1.0', '0.3.0', '0.3.1', '0.4.1', '0.4.2']",0.4.2,0.4.2,['noarch'],11.0,https://github.com/TimMonko/napari-ndev,['pyhd8ed1ab_0'],0.1.0,conda-forge/napari-ndev/0.1.0,1.0,0.0,2023-03-30 16:39:16.035000+00:00,2023-11-07 17:25:35.620000+00:00,conda,noarch/napari-ndev-0.1.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['aicsimageio', 'apoc-backend', 'dask-core', 'magicgui', 'napari', 'napari-workflows', 'numpy', 'pyclesperanto-prototype', 'python >=3.8', 'qtpy']",noarch,1680194208798.0,None-any-None,pyhd8ed1ab_0,2023-03-30 16:39:16.354000+00:00,5c68c861ad58261df0e773bec6a788aa,dccb28cefb71500b19cc7f42fbad819c82e3c5e5aba24a02b00332da6ef62bcb,14509.0,conda-forge/napari-ndev/0.1.0/noarch/napari-ndev-0.1.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-ndev/0.1.0/noarch/napari-ndev-0.1.0-pyhd8ed1ab_0.conda,conda,0.1.0,conda-forge,['main'],public,,0.2.1,napari-ndev.make_utilities_container,Make Image Utilities,napari_ndev._utilities_container:UtilitiesContainer,,,,2.1,napari-ndev,0.8.2,,A collection of widgets to process images from start to finish--focused on neural development.,"# napari-ndev +",text/markdown,https://github.com/gatoniel/napari-nd2-folder-viewer,Niklas Netter,niknett@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'pyyaml', 'marshmallow', 'desert', 'nd2 (>=0.4.3)', 'dask', 'pandas', 'openpyxl', 'julian', 'napari-animation', 'scikit-learn', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/gatoniel/napari-nd2-folder-viewer/issues', 'Documentation, https://github.com/gatoniel/napari-nd2-folder-viewer#README.md', 'Source Code, https://github.com/gatoniel/napari-nd2-folder-viewer', 'User Support, https://github.com/gatoniel/napari-nd2-folder-viewer/issues']",['testing'],False,0.0.3,conda-forge/napari-nd2-folder-viewer/0.0.3,0.0.7,conda-forge/napari-nd2-folder-viewer/0.0.7,0.0.9,conda-forge/napari-nd2-folder-viewer/0.0.9,conda,noarch/napari-nd2-folder-viewer-0.0.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core', 'desert', 'julian', 'magicgui', 'marshmallow', 'napari', 'nd2', 'numpy', 'openpyxl', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy']",pyhd8ed1ab_0,1663625784870.0,None-any-None,noarch,2022-09-19 22:18:42.074000+00:00,ee0433d8fe5bdbd618e89036266a712c,None,12902.0,conda-forge/napari-nd2-folder-viewer/0.0.3/noarch/napari-nd2-folder-viewer-0.0.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-nd2-folder-viewer/0.0.3/noarch/napari-nd2-folder-viewer-0.0.3-pyhd8ed1ab_0.tar.bz2,conda,0.0.3,conda-forge,['main'],conda,noarch/napari-nd2-folder-viewer-0.0.7-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['dask-core', 'desert', 'julian', 'magicgui', 'marshmallow', 'napari', 'napari-animation', 'nd2', 'numpy', 'openpyxl', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-learn']",noarch,1670891147171.0,None-any-None,pyhd8ed1ab_0,2022-12-13 00:27:42.008000+00:00,984edb370338a9eb42ec972b1a62d18f,f735d0623713c570ea3b56d70fe74b6719787084212fa6546e9614fd94eaf51e,15502.0,conda-forge/napari-nd2-folder-viewer/0.0.7/noarch/napari-nd2-folder-viewer-0.0.7-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-nd2-folder-viewer/0.0.7/noarch/napari-nd2-folder-viewer-0.0.7-pyhd8ed1ab_0.conda,conda,0.0.7,conda-forge,['main'],conda,noarch/napari-nd2-folder-viewer-0.0.9-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['dask-core', 'desert', 'julian', 'magicgui', 'marshmallow', 'napari', 'napari-animation', 'nd2', 'numpy', 'openpyxl', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-learn']",BSD-3-Clause,python,1674071527030.0,2023-01-18 19:54:02.257000+00:00,292735bee992c45c5ca9201af67ecb1f,06b869a4b4e480ca4f995691f8cddb0a9b5157746e5a43f6592b7d7b5780b751,15922.0,conda-forge/napari-nd2-folder-viewer/0.0.9/noarch/napari-nd2-folder-viewer-0.0.9-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-nd2-folder-viewer/0.0.9/noarch/napari-nd2-folder-viewer-0.0.9-pyhd8ed1ab_0.conda,conda,0.0.9,conda-forge,['main'],,,,,,,,,,,napari-nd2-folder-viewer.make_qwidget,Load nd2 folder,False,,,,,,,,,,,,,,,,,,,,,,,0.0.11,conda-forge/napari-nd2-folder-viewer/0.0.11,0.0.10,conda-forge/napari-nd2-folder-viewer/0.0.10,0.0.12,conda-forge/napari-nd2-folder-viewer/0.0.12,conda,noarch/napari-nd2-folder-viewer-0.0.11-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['dask-core', 'desert', 'julian', 'magicgui', 'marshmallow', 'napari', 'napari-animation', 'nd2', 'numpy', 'openpyxl', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-learn']",noarch,1674503694235.0,None-any-None,pyhd8ed1ab_0,2023-01-23 19:56:47.559000+00:00,213aa5cbd086ab2189f9d90b79a5896e,867e0fb9af202ec86902392d7f9b2418cbda684029f1c298fcb24869859385ac,16339.0,conda-forge/napari-nd2-folder-viewer/0.0.11/noarch/napari-nd2-folder-viewer-0.0.11-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-nd2-folder-viewer/0.0.11/noarch/napari-nd2-folder-viewer-0.0.11-pyhd8ed1ab_0.conda,conda,0.0.11,conda-forge,['main'],conda,noarch/napari-nd2-folder-viewer-0.0.10-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['dask-core', 'desert', 'julian', 'magicgui', 'marshmallow', 'napari', 'napari-animation', 'nd2', 'numpy', 'openpyxl', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-learn']",noarch,1674503711381.0,None-any-None,pyhd8ed1ab_0,2023-01-23 19:56:49.210000+00:00,d0d86e7f2e1c7e01782ab90db9e559e7,ac1bcd6b315bae7e1f5dcc8506acf6c70cd09afd1c723f2b29967c56eb69abf9,16271.0,conda-forge/napari-nd2-folder-viewer/0.0.10/noarch/napari-nd2-folder-viewer-0.0.10-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-nd2-folder-viewer/0.0.10/noarch/napari-nd2-folder-viewer-0.0.10-pyhd8ed1ab_0.conda,conda,0.0.10,conda-forge,['main'],conda,noarch/napari-nd2-folder-viewer-0.0.12-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['dask-core', 'desert', 'julian', 'magicgui', 'marshmallow', 'napari', 'napari-animation', 'nd2', 'numpy', 'openpyxl', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-learn']",BSD-3-Clause,python,1674504268848.0,2023-01-23 20:05:59.603000+00:00,db5fe710267441b3be7e8fa6b743b880,6b68c171b6750a949e9eb04f2fb08b09534f8661d754070970e41aff43571eb1,16636.0,conda-forge/napari-nd2-folder-viewer/0.0.12/noarch/napari-nd2-folder-viewer-0.0.12-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-nd2-folder-viewer/0.0.12/noarch/napari-nd2-folder-viewer-0.0.12-pyhd8ed1ab_0.conda,conda,0.0.12,conda-forge,['main'],,,,,,,0.0.13,conda-forge/napari-nd2-folder-viewer/0.0.13,,,conda,noarch/napari-nd2-folder-viewer-0.0.13-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['dask-core', 'desert', 'julian', 'magicgui', 'marshmallow', 'napari', 'napari-animation', 'nd2', 'numpy', 'openpyxl', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-learn']",noarch,1682248817587.0,None-any-None,pyhd8ed1ab_0,2023-04-23 11:22:33.801000+00:00,579fe6d70fffc511f3419ef2922e746e,2d9dc0fc37d5032c316e76ac746ef193f887501efe7808eecaf22f8a1a84f774,17173.0,conda-forge/napari-nd2-folder-viewer/0.0.13/noarch/napari-nd2-folder-viewer-0.0.13-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-nd2-folder-viewer/0.0.13/noarch/napari-nd2-folder-viewer-0.0.13-pyhd8ed1ab_0.conda,conda,0.0.13,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +264,napari-ndev,0.9.5,neuralDev,A collection of widgets to process images from start to finish--focused on neural development.,Tim Monko,BSD-3-Clause,https://github.com/TimMonko/napari-ndev,6425bb366d688545034bcd92,['conda'],,https://github.com/TimMonko/napari-ndev,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-ndev,http://api.anaconda.org/packages/conda-forge/napari-ndev,http://anaconda.org/conda-forge/napari-ndev,"['0.1.0', '0.3.0', '0.3.1', '0.4.1', '0.4.2', '0.5.0']",0.5.0,0.5.0,['noarch'],15.0,https://github.com/TimMonko/napari-ndev,['pyhd8ed1ab_0'],0.1.0,conda-forge/napari-ndev/0.1.0,1.0,0.0,2023-03-30 16:39:16.035000+00:00,2024-12-05 20:25:34.045000+00:00,conda,noarch/napari-ndev-0.1.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['aicsimageio', 'apoc-backend', 'dask-core', 'magicgui', 'napari', 'napari-workflows', 'numpy', 'pyclesperanto-prototype', 'python >=3.8', 'qtpy']",noarch,1680194208798.0,None-any-None,pyhd8ed1ab_0,2023-03-30 16:39:16.354000+00:00,5c68c861ad58261df0e773bec6a788aa,dccb28cefb71500b19cc7f42fbad819c82e3c5e5aba24a02b00332da6ef62bcb,14509.0,conda-forge/napari-ndev/0.1.0/noarch/napari-ndev-0.1.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-ndev/0.1.0/noarch/napari-ndev-0.1.0-pyhd8ed1ab_0.conda,conda,0.1.0,conda-forge,['main'],public,,0.2.1,napari-ndev.get_reader,Get BioIO Reader,napari_ndev._napari_reader:napari_get_reader,napari-ndev.get_reader,"['*.1sc', '*.2fl', '*.3fr', '*.acff', '*.acqp', '*.afi', '*.afm', '*.aim', '*.al3d', '*.ali', '*.am', '*.amiramesh', '*.ano', '*.apl', '*.arf', '*.array-like', '*.arw', '*.avi', '*.bay', '*.bif', '*.bin', '*.bip', '*.bmp', '*.bmq', '*.bsdf', '*.bufr', '*.bw', '*.c01', '*.cap', '*.cat', '*.cfg', '*.ch5', '*.cif', '*.cine', '*.cr2', '*.crw', '*.cs1', '*.csv', '*.ct', '*.ct.img', '*.cur', '*.cut', '*.cxd', '*.czi', '*.dat', '*.db', '*.dc2', '*.dcm', '*.dcr', '*.dcx', '*.dds', '*.df3', '*.dicom', '*.dm2', '*.dm3', '*.dng', '*.drf', '*.dsc', '*.dti', '*.dv', '*.ecw', '*.emf', '*.eps', '*.epsi', '*.erf', '*.exp', '*.exr', '*.fake', '*.fdf', '*.fff', '*.ffr', '*.fid', '*.fit', '*.fits', '*.flc', '*.flex', '*.fli', '*.fpx', '*.frm', '*.ftc', '*.fts', '*.ftu', '*.fz', '*.g3', '*.gbr', '*.gdcm', '*.gel', '*.gif', '*.gipl', '*.grey', '*.grib', '*.h5', '*.hdf', '*.hdf5', '*.hdp', '*.hdr', '*.hed', '*.his', '*.htd', '*.htm', '*.html', '*.hx', '*.i2i', '*.ia', '*.icns', '*.ico', '*.ics', '*.ids', '*.iff', '*.iim', '*.iiq', '*.im', '*.im3', '*.img', '*.imggz', '*.ims', '*.inf', '*.inr', '*.ipl', '*.ipm', '*.ipw', '*.j2c', '*.j2k', '*.jfif', '*.jif', '*.jng', '*.jp2', '*.jpc', '*.jpe', '*.jpeg', '*.jpf', '*.jpg', '*.jpk', '*.jpx', '*.jxr', '*.k25', '*.kc2', '*.kdc', '*.klb', '*.koa', '*.l2d', '*.labels', '*.lbm', '*.lei', '*.lfp', '*.lfr', '*.lif', '*.liff', '*.lim', '*.lms', '*.lsm', '*.mdb', '*.mdc', '*.mef', '*.mgh', '*.mha', '*.mhd', '*.mic', '*.mkv', '*.mnc', '*.mnc2', '*.mng', '*.mod', '*.mos', '*.mov', '*.mp4', '*.mpeg', '*.mpg', '*.mpo', '*.mrc', '*.mri', '*.mrw', '*.msp', '*.msr', '*.mtb', '*.mvd2', '*.naf', '*.nd', '*.nd2', '*.ndpi', '*.ndpis', '*.nef', '*.nhdr', '*.nia', '*.nii', '*.nii.gz', '*.niigz', '*.npz', '*.nrrd', '*.nrw', '*.obf', '*.oib', '*.oif', '*.oir', '*.ome', '*.ome.tif', '*.ome.tiff', '*.orf', '*.par', '*.pbm', '*.pcd', '*.pcoraw', '*.pct', '*.pcx', '*.pef', '*.pfm', '*.pgm', '*.pic', '*.pict', '*.png', '*.pnl', '*.ppm', '*.pr3', '*.ps', '*.psd', '*.ptx', '*.pxn', '*.pxr', '*.qptiff', '*.qtk', '*.r3d', '*.raf', '*.ras', '*.raw', '*.rcpnl', '*.rdc', '*.rec', '*.rgb', '*.rgba', '*.rw2', '*.rwl', '*.rwz', '*.scan', '*.scn', '*.sdt', '*.seq', '*.sif', '*.sld', '*.sm2', '*.sm3', '*.spc', '*.spe', '*.spi', '*.sr2', '*.srf', '*.srw', '*.st', '*.sti', '*.stk', '*.stp', '*.svs', '*.swf', '*.sxm', '*.targa', '*.tfr', '*.tga', '*.thm', '*.tif', '*.tiff', '*.tim', '*.tnb', '*.top', '*.txt', '*.v', '*.vff', '*.vms', '*.vsi', '*.vtk', '*.vws', '*.wap', '*.wat', '*.wav', '*.wbm', '*.wbmp', '*.wdp', '*.webp', '*.wlz', '*.wmf', '*.wmv', '*.wpi', '*.xbm', '*.xdce', '*.xml', '*.xpm', '*.xqd', '*.xqf', '*.xv', '*.xys', '*.zfp', '*.zfr', '*.zip', '*.zpo', '*.zvi']",False,2.1,napari-ndev,0.9.5,,A collection of widgets to process images from start to finish--focused on neural development.,"# napari-ndev [![License BSD-3](https://img.shields.io/pypi/l/napari-ndev.svg?color=green)](https://github.com/TimMonko/napari-ndev/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-ndev.svg?color=green)](https://pypi.org/project/napari-ndev) @@ -27004,15 +28078,21 @@ If you encounter any problems, please [file an issue] along with a detailed desc [![codecov](https://codecov.io/gh/TimMonko/napari-ndev/branch/main/graph/badge.svg)](https://codecov.io/gh/TimMonko/napari-ndev) [![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-ndev)](https://napari-hub.org/plugins/napari-ndev) - + -A collection of widgets intended to serve any person seeking to process microscopy images from start to finish. The wide breadth of this plugin's scope is only made possible by the amazing libraries and plugins from the napari community. +A collection of widgets intended to serve any person seeking to process microscopy images from start to finish, *with no coding necessary*. `napari-ndev` was designed to address the **gap between the napari viewer and batch python scripting**. -## Docs +* Accepts **diverse image formats**, dimensionality, file size, and maintains key metadata. +* Allows **advanced, arbitrary image processing** workflows to be used by novices. +* **User-friendly** sparse annotation and batch training of **machine learning classifiers**. +* Flexible label measurements, parsing of metadata, and summarization for **easily readable datasets**. +* Designed for ease of use, modification, and reproducibility. -[https://timmonko.github.io/napari-ndev/](https://timmonko.github.io/napari-ndev/) +## [Check out the Docs to learn more!](https://timmonko.github.io/napari-ndev/) ----------------------------------- +### See the [poster presented at BINA 2024](https://timmonko.github.io/napari-ndev/BINA_poster/) for an overview of the plugins in action! + +### Try out the [Virtual I2K 2024 Workshop](https://timmonko.github.io/napari-ndev/tutorial/00_setup/) for an interactive tutorial! ## Installation @@ -27022,16 +28102,38 @@ A collection of widgets intended to serve any person seeking to process microsco pip install napari-ndev ``` -You may also like to install `napari-aicsimageio` to properly handle metadata with the `Image Utilities` widget. +The easiest way to get started with **napari-ndev** is to install all the optional dependencies (see note below) with: + +```bash +pip install napari-ndev[all] +``` + +---------------------------------- + +### Optional Libraries + +**napari-ndev** is most useful when interacting with some other napari plugins (e.g. napari-assistant) and can read additional filetypes. A few extra BSD3 compatible napari-plugins may be installed with [pip]: + +```bash +pip install napari-ndev[extras] +``` + +**napari-ndev** can optionally use GPL-3 licensed libraries to enhance its functionality, but are not required. If you choose to install and use these optional dependencies, you must comply with the GPL-3 license terms. The main functional improvement is from some `bioio` libraries to support extra image formats, including `czi` and `lif` files. These libraries can be installed with [pip]: ```bash -pip install napari-aicsimageio +pip install napari-ndev[gpl-extras] ``` -In addition, you may need to install specific [`bioio` readers](https://github.com/bioio-devs/bioio) to support your specific image, such as `bioio-czi` or `bioio-lif`. +In addition, you may need to install specific [`bioio` readers](https://github.com/bioio-devs/bioio) to support your specific image, such as `bioio-czi` and `bioio-lif` (included in `[gpl-extras]`) or `bioio-bioformats`. + +### Development Libraries + +For development use the `[dev]` optional libraries. You may also like to install `[docs]` and `[testing]` to verify your changes. However, `tox` will test any pull requests. You can also install `[dev-all]` to get all three of these dev dependencies. ---------------------------------- +The wide breadth of this plugin's scope is only made possible by the amazing libraries and plugins from the python and napari community, especially [Robert Haase](https://github.com/haesleinhuepf). + This [napari] plugin was generated with [Cookiecutter] using [napari]'s [cookiecutter-napari-plugin] template. ## Contributing @@ -27042,7 +28144,9 @@ the coverage at least stays the same before you submit a pull request. ## License Distributed under the terms of the [BSD-3] license, -""napari-ndev"" is free and open source software +""napari-ndev"" is free and open source software. + +Some optional libraries can be installed to add functionality to `napari-ndev`, including some that may be more restrictive than this package's BSD-3-Clause. ## Issues @@ -27055,8 +28159,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ -",text/markdown,https://github.com/TimMonko/napari-ndev,Tim Monko,timmonko@gmail.com,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Framework :: napari', 'Intended Audience :: Education', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Visualization', 'Topic :: Software Development :: User Interfaces', 'Topic :: Software Development :: Libraries :: Python Modules', 'Topic :: Utilities']","['numpy', 'magicgui>=0.8.3', 'qtpy', 'aicsimageio', 'napari>=0.4.19', 'apoc', 'pyclesperanto-prototype', 'dask', 'napari-workflows', 'seaborn', 'stackview', 'bioio>=1.1.0', 'bioio-ome-tiff', 'bioio-imageio', 'tifffile>=2023.3.15', 'scikit-image>=0.18.0', 'ruff; extra == ""dev""', 'pre-commit; extra == ""dev""', 'mkdocs; extra == ""docs""', 'mkdocs-autorefs; extra == ""docs""', 'mkdocs-material; extra == ""docs""', 'mkdocstrings; extra == ""docs""', 'mkdocstrings-python; extra == ""docs""', 'mkdocs-jupyter; extra == ""docs""', 'mkdocs-spellcheck[all]; extra == ""docs""', 'mkdocs-literate-nav; extra == ""docs""', 'black; extra == ""docs""', 'napari-pyclesperanto-assistant; extra == ""extra-plugins""', 'napari-segment-blobs-and-things-with-membranes; extra == ""extra-plugins""', 'napari-simpleitk-image-processing; extra == ""extra-plugins""', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""', 'napari-segment-blobs-and-things-with-membranes; extra == ""testing""']",>=3.9,"['Bug Tracker, https://github.com/TimMonko/napari-ndev/issues', 'Documentation, https://timmonko.github.io/napari-ndev/', 'Source Code, https://github.com/TimMonko/napari-ndev']","['dev', 'docs', 'extra-plugins', 'testing']",False,0.3.0,conda-forge/napari-ndev/0.3.0,0.3.1,conda-forge/napari-ndev/0.3.1,0.4.1,conda-forge/napari-ndev/0.4.1,conda,noarch/napari-ndev-0.3.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['aicsimageio', 'apoc-backend', 'dask-core', 'magicgui', 'napari', 'napari-workflows', 'numpy', 'pyclesperanto-prototype', 'python >=3.8', 'qtpy']",pyhd8ed1ab_0,1683054574296.0,None-any-None,noarch,2023-05-02 19:12:30.655000+00:00,d4d12f927f7c03123f7e5e2cf30988ae,d9a53cd31eb2605a41ddd286204504400dcfe75058c89d2cd8818bdc4c51c2d0,17544.0,conda-forge/napari-ndev/0.3.0/noarch/napari-ndev-0.3.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-ndev/0.3.0/noarch/napari-ndev-0.3.0-pyhd8ed1ab_0.conda,conda,0.3.0,conda-forge,['main'],conda,noarch/napari-ndev-0.3.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['aicsimageio', 'apoc-backend', 'dask-core', 'magicgui', 'napari', 'napari-workflows', 'numpy', 'pyclesperanto-prototype', 'python >=3.8', 'qtpy']",noarch,1699375104449.0,None-any-None,pyhd8ed1ab_0,2023-11-07 16:40:52.293000+00:00,029ddec0389d0a9a3adb72af52572c74,e69a8cef371d6574de8810d1e65ba5939cd9371da84d0292ac9912b01875682f,18370.0,conda-forge/napari-ndev/0.3.1/noarch/napari-ndev-0.3.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-ndev/0.3.1/noarch/napari-ndev-0.3.1-pyhd8ed1ab_0.conda,conda,0.3.1,conda-forge,['main'],conda,noarch/napari-ndev-0.4.1-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['aicsimageio', 'apoc-backend', 'dask-core', 'magicgui', 'napari', 'napari-workflows', 'numpy', 'pyclesperanto-prototype', 'python >=3.8', 'qtpy']",BSD-3-Clause,python,1699375604204.0,2023-11-07 16:49:13.713000+00:00,832ff8229c54760be8054bd4f80af8e7,4697dd852403d7c254690838a5a384165c0edb2bf5b4fdc935136fa707469e66,19204.0,conda-forge/napari-ndev/0.4.1/noarch/napari-ndev-0.4.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-ndev/0.4.1/noarch/napari-ndev-0.4.1-pyhd8ed1ab_0.conda,conda,0.4.1,conda-forge,['main'],,napari-ndev.make_workflow_container,Make Batch Workflow,napari_ndev._workflow_container:WorkflowContainer,napari-ndev.make_apoc_container,Make Batch APOC,napari_ndev._apoc_container:ApocContainer,napari-ndev.make_custom_apoc,Make Custom APOC Feature Set,napari_ndev._apoc_feature_stack:ApocFeatureStack,napari-ndev.make_utilities_container,Image Utilities,False,napari-ndev.make_workflow_container,Workflow Widget,False,napari-ndev.make_apoc_container,APOC Widget,False,napari-ndev.make_custom_apoc,Custom APOC Feature Set,False,napari-ndev.make_measure_container,Make Measure Container,napari_ndev._measure_container:MeasureContainer,,,,,,,,,,,0.4.2,conda-forge/napari-ndev/0.4.2,,,,,conda,noarch/napari-ndev-0.4.2-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['aicsimageio', 'apoc-backend', 'dask-core', 'magicgui', 'napari', 'napari-workflows', 'numpy', 'pyclesperanto-prototype', 'python >=3.8', 'qtpy']",noarch,1699377791522.0,None-any-None,pyhd8ed1ab_0,2023-11-07 17:25:33.570000+00:00,612fea6a48b7823fe86982c757dcc35b,00ef71d7bcbf208287525d0d16121fb33b71044caf069c27f21009bd9baa9e50,19277.0,conda-forge/napari-ndev/0.4.2/noarch/napari-ndev-0.4.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-ndev/0.4.2/noarch/napari-ndev-0.4.2-pyhd8ed1ab_0.conda,conda,0.4.2,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-ndev.make_measure_container,Measure Widget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -254,napari-ndtiffs,0.2.1,napari-ndtiffs,napari plugin for nd tiff folders with OpenCl deskew,,BSD-3-Clause,,61f2e2a427bdd9a91c48ca0a,['conda'],,https://github.com/tlambert03/napari-ndtiffs,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-ndtiffs,http://api.anaconda.org/packages/conda-forge/napari-ndtiffs,http://anaconda.org/conda-forge/napari-ndtiffs,['0.1.2'],0.1.2,0.1.2,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.2,conda-forge/napari-ndtiffs/0.1.2,1.0,0.0,2022-01-27 18:21:21.862000+00:00,2023-06-18 08:40:38.800000+00:00,conda,noarch/napari-ndtiffs-0.1.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core', 'napari-plugin-engine >=0.1.4', 'numpy', 'pyopencl', 'python >=3.7', 'python-dateutil', 'scipy', 'tifffile']",noarch,1643307628348.0,None-any-None,pyhd8ed1ab_0,2022-01-27 18:21:22.512000+00:00,eaa48c02fc0c7c969996a7f1f1d11787,None,18271.0,conda-forge/napari-ndtiffs/0.1.2/noarch/napari-ndtiffs-0.1.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-ndtiffs/0.1.2/noarch/napari-ndtiffs-0.1.2-pyhd8ed1ab_0.tar.bz2,conda,0.1.2,conda-forge,['main'],public,,0.2.0,napari-ndtiffs.get_reader,Get Reader,napari_ndtiffs:napari_get_reader,napari-ndtiffs.get_reader,['*'],True,2.1,napari-ndtiffs,0.2.1,,napari plugin for nd tiff folders with OpenCl deskew,"# napari-ndtiffs +",text/markdown,https://github.com/TimMonko/napari-ndev,Tim Monko,timmonko@gmail.com,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Framework :: napari', 'Intended Audience :: Education', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Visualization', 'Topic :: Software Development :: User Interfaces', 'Topic :: Software Development :: Libraries :: Python Modules', 'Topic :: Utilities']","['numpy<2.0,>=1.26', 'siphash24>=1.6', 'magicgui>=0.8.3', 'magic-class', 'napari[all]>=0.4.19', 'apoc', 'pyclesperanto-prototype', 'pyclesperanto', 'dask', 'napari-workflows', 'napari-pyclesperanto-assistant', 'napari-segment-blobs-and-things-with-membranes', 'natsort', 'seaborn', 'stackview', 'tifffile>=2023.3.15', 'scikit-image>=0.18.0', 'bioio>=1.1.0', 'bioio-ome-tiff>=1', 'bioio-tifffile>=1', 'bioio-imageio>=1', 'bioio-ome-zarr>=1', 'bioio-nd2>=1', 'napari-ndev[extras]; extra == ""all""', 'napari-ndev[gpl_extras]; extra == ""all""', 'ruff; extra == ""dev""', 'pre-commit; extra == ""dev""', 'napari-ndev[testing]; extra == ""dev-all""', 'napari-ndev[docs]; extra == ""dev-all""', 'napari-ndev[dev]; extra == ""dev-all""', 'mkdocs; extra == ""docs""', 'mkdocs-autorefs; extra == ""docs""', 'mkdocs-material; extra == ""docs""', 'mkdocstrings; extra == ""docs""', 'mkdocstrings-python; extra == ""docs""', 'mkdocs-jupyter; extra == ""docs""', 'mkdocs-pdf; extra == ""docs""', 'mkdocs-spellcheck[all]; extra == ""docs""', 'mkdocs-literate-nav; extra == ""docs""', 'mkdocs-table-reader-plugin; extra == ""docs""', 'black; extra == ""docs""', 'napari-simpleitk-image-processing; extra == ""extras""', 'bioio-czi>=1.0.1; extra == ""gpl-extras""', 'bioio-lif>=1; extra == ""gpl-extras""', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""', 'bioio-czi>=1.0.1; extra == ""testing""', 'napari-ndev[extras]; extra == ""testing""']",>=3.9,"['Bug Tracker, https://github.com/TimMonko/napari-ndev/issues', 'Documentation, https://timmonko.github.io/napari-ndev/', 'Source Code, https://github.com/TimMonko/napari-ndev']","['all', 'dev', 'dev-all', 'docs', 'extras', 'gpl_extras', 'testing']",False,0.3.0,conda-forge/napari-ndev/0.3.0,0.3.1,conda-forge/napari-ndev/0.3.1,0.4.1,conda-forge/napari-ndev/0.4.1,conda,noarch/napari-ndev-0.3.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['aicsimageio', 'apoc-backend', 'dask-core', 'magicgui', 'napari', 'napari-workflows', 'numpy', 'pyclesperanto-prototype', 'python >=3.8', 'qtpy']",pyhd8ed1ab_0,1683054574296.0,None-any-None,noarch,2023-05-02 19:12:30.655000+00:00,d4d12f927f7c03123f7e5e2cf30988ae,d9a53cd31eb2605a41ddd286204504400dcfe75058c89d2cd8818bdc4c51c2d0,17544.0,conda-forge/napari-ndev/0.3.0/noarch/napari-ndev-0.3.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-ndev/0.3.0/noarch/napari-ndev-0.3.0-pyhd8ed1ab_0.conda,conda,0.3.0,conda-forge,['main'],conda,noarch/napari-ndev-0.3.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['aicsimageio', 'apoc-backend', 'dask-core', 'magicgui', 'napari', 'napari-workflows', 'numpy', 'pyclesperanto-prototype', 'python >=3.8', 'qtpy']",noarch,1699375104449.0,None-any-None,pyhd8ed1ab_0,2023-11-07 16:40:52.293000+00:00,029ddec0389d0a9a3adb72af52572c74,e69a8cef371d6574de8810d1e65ba5939cd9371da84d0292ac9912b01875682f,18370.0,conda-forge/napari-ndev/0.3.1/noarch/napari-ndev-0.3.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-ndev/0.3.1/noarch/napari-ndev-0.3.1-pyhd8ed1ab_0.conda,conda,0.3.1,conda-forge,['main'],conda,noarch/napari-ndev-0.4.1-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['aicsimageio', 'apoc-backend', 'dask-core', 'magicgui', 'napari', 'napari-workflows', 'numpy', 'pyclesperanto-prototype', 'python >=3.8', 'qtpy']",BSD-3-Clause,python,1699375604204.0,2023-11-07 16:49:13.713000+00:00,832ff8229c54760be8054bd4f80af8e7,4697dd852403d7c254690838a5a384165c0edb2bf5b4fdc935136fa707469e66,19204.0,conda-forge/napari-ndev/0.4.1/noarch/napari-ndev-0.4.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-ndev/0.4.1/noarch/napari-ndev-0.4.1-pyhd8ed1ab_0.conda,conda,0.4.1,conda-forge,['main'],,napari-ndev.make_utilities_container,Make Image Utilities,napari_ndev.widgets._utilities_container:UtilitiesContainer,napari-ndev.make_workflow_container,Make Batch Workflow,napari_ndev.widgets._workflow_container:WorkflowContainer,napari-ndev.make_apoc_container,Make Batch APOC,napari_ndev.widgets._apoc_container:ApocContainer,napari-ndev.make_utilities_container,Image Utilities,False,napari-ndev.make_workflow_container,Workflow Widget,False,napari-ndev.make_apoc_container,APOC Widget,False,napari-ndev.make_measure_container,Measure Widget,False,napari-ndev.make_measure_container,Make Measure Container,napari_ndev.widgets._measure_container:MeasureContainer,,,,,,,,,,,0.4.2,conda-forge/napari-ndev/0.4.2,0.5.0,conda-forge/napari-ndev/0.5.0,,,conda,noarch/napari-ndev-0.4.2-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['aicsimageio', 'apoc-backend', 'dask-core', 'magicgui', 'napari', 'napari-workflows', 'numpy', 'pyclesperanto-prototype', 'python >=3.8', 'qtpy']",noarch,1699377791522.0,None-any-None,pyhd8ed1ab_0,2023-11-07 17:25:33.570000+00:00,612fea6a48b7823fe86982c757dcc35b,00ef71d7bcbf208287525d0d16121fb33b71044caf069c27f21009bd9baa9e50,19277.0,conda-forge/napari-ndev/0.4.2/noarch/napari-ndev-0.4.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-ndev/0.4.2/noarch/napari-ndev-0.4.2-pyhd8ed1ab_0.conda,conda,0.4.2,conda-forge,['main'],conda,noarch/napari-ndev-0.5.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['aicsimageio', 'apoc-backend', 'dask-core', 'magicgui', 'napari', 'napari-workflows', 'numpy', 'pyclesperanto-prototype', 'python >=3.8', 'qtpy']",noarch,1733430148679.0,None-any-None,pyhd8ed1ab_0,2024-12-05 20:24:42.553000+00:00,207999cd7ae52085f97035fc2f7465d2,2e26d82515d769584450f65dd5b20bafec08c904d4e39e63864ad3e8e72380ae,21036.0,conda-forge/napari-ndev/0.5.0/noarch/napari-ndev-0.5.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-ndev/0.5.0/noarch/napari-ndev-0.5.0-pyhd8ed1ab_0.conda,conda,0.5.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +265,napari-ndtiffs,0.2.1,napari-ndtiffs,napari plugin for nd tiff folders with OpenCl deskew,,BSD-3-Clause,,61f2e2a427bdd9a91c48ca0a,['conda'],,https://github.com/tlambert03/napari-ndtiffs,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-ndtiffs,http://api.anaconda.org/packages/conda-forge/napari-ndtiffs,http://anaconda.org/conda-forge/napari-ndtiffs,['0.1.2'],0.1.2,0.1.2,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.2,conda-forge/napari-ndtiffs/0.1.2,1.0,0.0,2022-01-27 18:21:21.862000+00:00,2023-06-18 08:40:38.800000+00:00,conda,noarch/napari-ndtiffs-0.1.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core', 'napari-plugin-engine >=0.1.4', 'numpy', 'pyopencl', 'python >=3.7', 'python-dateutil', 'scipy', 'tifffile']",noarch,1643307628348.0,None-any-None,pyhd8ed1ab_0,2022-01-27 18:21:22.512000+00:00,eaa48c02fc0c7c969996a7f1f1d11787,None,18271.0,conda-forge/napari-ndtiffs/0.1.2/noarch/napari-ndtiffs-0.1.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-ndtiffs/0.1.2/noarch/napari-ndtiffs-0.1.2-pyhd8ed1ab_0.tar.bz2,conda,0.1.2,conda-forge,['main'],public,,0.2.0,napari-ndtiffs.get_reader,Get Reader,napari_ndtiffs:napari_get_reader,napari-ndtiffs.get_reader,['*'],True,2.1,napari-ndtiffs,0.2.1,,napari plugin for nd tiff folders with OpenCl deskew,"# napari-ndtiffs [![License](https://img.shields.io/pypi/l/napari-ndtiffs.svg?color=green)](https://raw.githubusercontent.com/tlambert03/napari-ndtiffs/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-ndtiffs.svg?color=green)](https://pypi.org/project/napari-ndtiffs) @@ -27188,8 +28292,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ [PyOpenCL]: https://documen.tician.de/pyopencl/ [CuPy]: https://docs.cupy.dev/ -",text/markdown,,,Talley Lambert ,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10']","['dask[array]', 'napari-plugin-engine>=0.1.4', 'numpy', 'python-dateutil', 'scipy', 'tifffile', ""black; extra == 'dev'"", ""ipython; extra == 'dev'"", ""mypy; extra == 'dev'"", ""pdbpp; extra == 'dev'"", ""rich; extra == 'dev'"", ""ruff; extra == 'dev'"", ""pyopencl; extra == 'opencl'"", ""pyopencl; extra == 'test'"", ""pytest; extra == 'test'"", ""pytest-cov; extra == 'test'""]",>=3.8,"['Bug Tracker, https://github.com/tlambert03/napari-ndtiffs/issues', 'Documentation, https://github.com/tlambert03/napari-ndtiffs#README.md', 'Source Code, https://github.com/tlambert03/napari-ndtiffs', 'User Support, https://github.com/tlambert03/napari-ndtiffs/issues']","['dev', 'opencl', 'test']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -255,napari-nibabel,0.1.0,Napari NiBabel,Read access to some common neuroimaging file formats,Ashley Anderson,MIT,,6435eaa82e917f0f9b12e76f,['conda'],,https://pypi.org/project/napari-nibabel/,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-nibabel,http://api.anaconda.org/packages/conda-forge/napari-nibabel,http://anaconda.org/conda-forge/napari-nibabel,['0.1.0'],0.1.0,0.1.0,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.0,conda-forge/napari-nibabel/0.1.0,1.0,0.0,2023-04-11 23:17:57.713000+00:00,2023-06-18 17:27:59.808000+00:00,conda,noarch/napari-nibabel-0.1.0-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['nibabel', 'numpy', 'pydicom', 'python >=3.8']",noarch,1681255024390.0,None-any-None,pyhd8ed1ab_0,2023-04-11 23:17:57.944000+00:00,442b6cd7f61131f13974a8219173382d,5f891d2f3c89442701953d74d730b48af34757039f25493322b51d169a17cb35,11833.0,conda-forge/napari-nibabel/0.1.0/noarch/napari-nibabel-0.1.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-nibabel/0.1.0/noarch/napari-nibabel-0.1.0-pyhd8ed1ab_0.conda,conda,0.1.0,conda-forge,['main'],public,,0.2.1,napari-nibabel.get_reader,Open data with NiBabel,napari_nibabel._reader:napari_get_reader,napari-nibabel.get_reader,"['*.par', '*.hdr', '*.nii', '*.nii.gz', '*.gii', '*.dcm']",True,2.1,napari-nibabel,0.1.0,,Read access to some common neuroimaging file formats,"# napari-nibabel +",text/markdown,,,Talley Lambert ,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10']","['dask[array]', 'napari-plugin-engine>=0.1.4', 'numpy', 'python-dateutil', 'scipy', 'tifffile', ""black; extra == 'dev'"", ""ipython; extra == 'dev'"", ""mypy; extra == 'dev'"", ""pdbpp; extra == 'dev'"", ""rich; extra == 'dev'"", ""ruff; extra == 'dev'"", ""pyopencl; extra == 'opencl'"", ""pyopencl; extra == 'test'"", ""pytest; extra == 'test'"", ""pytest-cov; extra == 'test'""]",>=3.8,"['Bug Tracker, https://github.com/tlambert03/napari-ndtiffs/issues', 'Documentation, https://github.com/tlambert03/napari-ndtiffs#README.md', 'Source Code, https://github.com/tlambert03/napari-ndtiffs', 'User Support, https://github.com/tlambert03/napari-ndtiffs/issues']","['dev', 'opencl', 'test']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +266,napari-nibabel,0.1.0,Napari NiBabel,Read access to some common neuroimaging file formats,Ashley Anderson,MIT,,6435eaa82e917f0f9b12e76f,['conda'],,https://pypi.org/project/napari-nibabel/,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-nibabel,http://api.anaconda.org/packages/conda-forge/napari-nibabel,http://anaconda.org/conda-forge/napari-nibabel,['0.1.0'],0.1.0,0.1.0,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.0,conda-forge/napari-nibabel/0.1.0,1.0,0.0,2023-04-11 23:17:57.713000+00:00,2023-06-18 17:27:59.808000+00:00,conda,noarch/napari-nibabel-0.1.0-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['nibabel', 'numpy', 'pydicom', 'python >=3.8']",noarch,1681255024390.0,None-any-None,pyhd8ed1ab_0,2023-04-11 23:17:57.944000+00:00,442b6cd7f61131f13974a8219173382d,5f891d2f3c89442701953d74d730b48af34757039f25493322b51d169a17cb35,11833.0,conda-forge/napari-nibabel/0.1.0/noarch/napari-nibabel-0.1.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-nibabel/0.1.0/noarch/napari-nibabel-0.1.0-pyhd8ed1ab_0.conda,conda,0.1.0,conda-forge,['main'],public,,0.2.1,napari-nibabel.get_reader,Open data with NiBabel,napari_nibabel._reader:napari_get_reader,napari-nibabel.get_reader,"['*.par', '*.hdr', '*.nii', '*.nii.gz', '*.gii', '*.dcm']",True,2.1,napari-nibabel,0.1.0,,Read access to some common neuroimaging file formats,"# napari-nibabel [![License MIT](https://img.shields.io/pypi/l/napari-nibabel.svg?color=green)](https://github.com/aganders3/napari-nibabel/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-nibabel.svg?color=green)](https://pypi.org/project/napari-nibabel) @@ -27245,8 +28349,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,,Ashley Anderson,aandersoniii@chanzuckerberg.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'nibabel[dicom,dicomfs,spm]', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.8,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -256,napari-nifti,0.0.16,napari-nifti,A napari plugin for reading and writing NIFTI files that have the extension .nii or .nii.gz.,Karol Gotkowski,Apache-2.0,https://github.com/MIC-DKFZ/napari-nifti,644059ea3f7afa213b2ca77c,['conda'],,https://github.com/MIC-DKFZ/napari-nifti,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-nifti,http://api.anaconda.org/packages/conda-forge/napari-nifti,http://anaconda.org/conda-forge/napari-nifti,"['0.0.5', '0.0.10', '0.0.11', '0.0.12']",0.0.5,0.0.12,['noarch'],6.0,,['pyhd8ed1ab_0'],0.0.5,conda-forge/napari-nifti/0.0.5,1.0,0.0,2023-04-19 21:15:19.574000+00:00,2023-07-26 03:30:50.875000+00:00,conda,noarch/napari-nifti-0.0.5-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['numpy', 'python >=3.8', 'simpleitk']",noarch,1681938855941.0,None-any-None,pyhd8ed1ab_0,2023-04-19 21:15:19.994000+00:00,0a2b58acd550d605a7d9909cd1bd3ea8,d4466cd57a071a235c8328d62c60d40db515049cd19adf10c0dd05c116fe547b,15115.0,conda-forge/napari-nifti/0.0.5/noarch/napari-nifti-0.0.5-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-nifti/0.0.5/noarch/napari-nifti-0.0.5-pyhd8ed1ab_0.conda,conda,0.0.5,conda-forge,['main'],public,,0.2.1,napari-nifti.get_reader,Open a Nifti image with napari-nifti,napari_nifti._reader:napari_get_reader,napari-nifti.get_reader,"['*.nii', '*.nii.gz', '*.nrrd']",False,2.1,napari-nifti,0.0.16,,A napari plugin for reading and writing NIFTI files that have the extension .nii or .nii.gz.,"# napari-nifti +",text/markdown,,Ashley Anderson,aandersoniii@chanzuckerberg.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'nibabel[dicom,dicomfs,spm]', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.8,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +267,napari-nifti,0.0.17,napari-nifti,A napari plugin for reading and writing NIFTI files that have the extension .nii or .nii.gz.,Karol Gotkowski,Apache-2.0,https://github.com/MIC-DKFZ/napari-nifti,644059ea3f7afa213b2ca77c,['conda'],,https://github.com/MIC-DKFZ/napari-nifti,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-nifti,http://api.anaconda.org/packages/conda-forge/napari-nifti,http://anaconda.org/conda-forge/napari-nifti,"['0.0.5', '0.0.10', '0.0.11', '0.0.12']",0.0.5,0.0.12,['noarch'],6.0,,['pyhd8ed1ab_0'],0.0.5,conda-forge/napari-nifti/0.0.5,1.0,0.0,2023-04-19 21:15:19.574000+00:00,2023-07-26 03:30:50.875000+00:00,conda,noarch/napari-nifti-0.0.5-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['numpy', 'python >=3.8', 'simpleitk']",noarch,1681938855941.0,None-any-None,pyhd8ed1ab_0,2023-04-19 21:15:19.994000+00:00,0a2b58acd550d605a7d9909cd1bd3ea8,d4466cd57a071a235c8328d62c60d40db515049cd19adf10c0dd05c116fe547b,15115.0,conda-forge/napari-nifti/0.0.5/noarch/napari-nifti-0.0.5-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-nifti/0.0.5/noarch/napari-nifti-0.0.5-pyhd8ed1ab_0.conda,conda,0.0.5,conda-forge,['main'],public,,0.2.1,napari-nifti.get_reader,Open a Nifti image with napari-nifti,napari_nifti._reader:napari_get_reader,napari-nifti.get_reader,"['*.gz', '*.nii', '*.nii.gz', '*.nrrd']",False,2.1,napari-nifti,0.0.17,,A napari plugin for reading and writing NIFTI files that have the extension .nii or .nii.gz.,"# napari-nifti [![License Apache Software License 2.0](https://img.shields.io/pypi/l/napari-nifti.svg?color=green)](https://github.com/MIC-DKFZ/napari-nifti/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-nifti.svg?color=green)](https://pypi.org/project/napari-nifti) @@ -27322,8 +28426,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc napari-nifti is developed and maintained by the Applied Computer Vision Lab (ACVL) of [Helmholtz Imaging](http://helmholtz-imaging.de) and the [Division of Medical Image Computing](https://www.dkfz.de/en/mic/index.php) at the [German Cancer Research Center (DKFZ)](https://www.dkfz.de/en/index.html). -",text/markdown,https://github.com/MIC-DKFZ/napari-nifti,Karol Gotkowski,karol.gotkowski@dkfz.de,Apache-2.0,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['medvol', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""']",>=3.8,"['Bug Tracker, https://github.com/MIC-DKFZ/napari-nifti/issues', 'Documentation, https://github.com/MIC-DKFZ/napari-nifti#README.md', 'Source Code, https://github.com/MIC-DKFZ/napari-nifti', 'User Support, https://github.com/MIC-DKFZ/napari-nifti/issues']",['testing'],False,0.0.10,conda-forge/napari-nifti/0.0.10,0.0.11,conda-forge/napari-nifti/0.0.11,0.0.12,conda-forge/napari-nifti/0.0.12,conda,noarch/napari-nifti-0.0.10-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['numpy', 'python >=3.8', 'simpleitk']",pyhd8ed1ab_0,1690341113315.0,None-any-None,noarch,2023-07-26 03:12:48.975000+00:00,0745389af49cefdd56f7868919de1e29,4410e0df6b7c7d953973d02c9b0186e5d9b1b53795a8c4f1713f0aa443f23299,15157.0,conda-forge/napari-nifti/0.0.10/noarch/napari-nifti-0.0.10-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-nifti/0.0.10/noarch/napari-nifti-0.0.10-pyhd8ed1ab_0.conda,conda,0.0.10,conda-forge,['main'],conda,noarch/napari-nifti-0.0.11-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['numpy', 'python >=3.8', 'simpleitk']",noarch,1690341888284.0,None-any-None,pyhd8ed1ab_0,2023-07-26 03:26:02.395000+00:00,1a968d56543c35dd3c102644d018c655,8f181af1bf1a3369b55e69690f7c6bb5bacfcd4fec5c2c77f0d3e8930904bed8,15238.0,conda-forge/napari-nifti/0.0.11/noarch/napari-nifti-0.0.11-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-nifti/0.0.11/noarch/napari-nifti-0.0.11-pyhd8ed1ab_0.conda,conda,0.0.11,conda-forge,['main'],conda,noarch/napari-nifti-0.0.12-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['numpy', 'python >=3.8', 'simpleitk']",Apache-2.0,python,1690342194483.0,2023-07-26 03:30:49.326000+00:00,0d4b7681cededda51b2fa5add79f794d,9605e5c0831b7f6d5032bd552781c0142baa0925a4248bdf5b5ad03bf763c433,15298.0,conda-forge/napari-nifti/0.0.12/noarch/napari-nifti-0.0.12-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-nifti/0.0.12/noarch/napari-nifti-0.0.12-pyhd8ed1ab_0.conda,conda,0.0.12,conda-forge,['main'],,napari-nifti.write_single_image,Save an image as Nifti with napari-nifti,napari_nifti._writer:write_single_image,,,,,,,,,,,,,,,,,,,,,,napari-nifti.write_single_image,['image'],,napari-nifti.write_single_image,['labels'],"['.nii', '.nii.gz', '.nrrd']",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['.nii', '.nii.gz', '.nrrd']",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -257,napari-nikon-nd2,0.1.3,napari-nikon-nd2,Opens Nikon ND2 files into napari.,Chris Wood,Apache Software License 2.0,https://github.com/cwood1967/napari-nikon-nd2,6200f059a3c32938bdb4a416,['conda'],,https://github.com/cwood1967/napari-nikon-nd2,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-nikon-nd2,http://api.anaconda.org/packages/conda-forge/napari-nikon-nd2,http://anaconda.org/conda-forge/napari-nikon-nd2,['0.1.3'],0.1.3,0.1.3,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.3,conda-forge/napari-nikon-nd2/0.1.3,1.0,0.0,2022-02-07 10:11:35.650000+00:00,2023-06-18 08:40:48.103000+00:00,conda,noarch/napari-nikon-nd2-0.1.3-pyhd8ed1ab_0.tar.bz2,0.0,Apache-2.0,False,python,"['napari-plugin-engine >=0.1.4', 'nd2reader', 'numpy', 'python >=3.6,<=3.9']",noarch,1644228651013.0,None-any-None,pyhd8ed1ab_0,2022-02-07 10:11:35.870000+00:00,bf7fba8bae235a96771af62ab47e42bb,None,14143.0,conda-forge/napari-nikon-nd2/0.1.3/noarch/napari-nikon-nd2-0.1.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-nikon-nd2/0.1.3/noarch/napari-nikon-nd2-0.1.3-pyhd8ed1ab_0.tar.bz2,conda,0.1.3,conda-forge,['main'],public,,0.2.1,napari-nikon-nd2.napari_get_reader,napari_get_reader,napari_nikon_nd2._reader:napari_get_reader,napari-nikon-nd2.napari_get_reader,['*'],True,2.1,napari-nikon-nd2,0.1.3,['UNKNOWN'],Opens Nikon ND2 files into napari.,"# napari-nikon-nd2 +",text/markdown,https://github.com/MIC-DKFZ/napari-nifti,Karol Gotkowski,karol.gotkowski@dkfz.de,Apache-2.0,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['medvol', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""']",>=3.8,"['Bug Tracker, https://github.com/MIC-DKFZ/napari-nifti/issues', 'Documentation, https://github.com/MIC-DKFZ/napari-nifti#README.md', 'Source Code, https://github.com/MIC-DKFZ/napari-nifti', 'User Support, https://github.com/MIC-DKFZ/napari-nifti/issues']",['testing'],False,0.0.10,conda-forge/napari-nifti/0.0.10,0.0.11,conda-forge/napari-nifti/0.0.11,0.0.12,conda-forge/napari-nifti/0.0.12,conda,noarch/napari-nifti-0.0.10-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['numpy', 'python >=3.8', 'simpleitk']",pyhd8ed1ab_0,1690341113315.0,None-any-None,noarch,2023-07-26 03:12:48.975000+00:00,0745389af49cefdd56f7868919de1e29,4410e0df6b7c7d953973d02c9b0186e5d9b1b53795a8c4f1713f0aa443f23299,15157.0,conda-forge/napari-nifti/0.0.10/noarch/napari-nifti-0.0.10-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-nifti/0.0.10/noarch/napari-nifti-0.0.10-pyhd8ed1ab_0.conda,conda,0.0.10,conda-forge,['main'],conda,noarch/napari-nifti-0.0.11-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['numpy', 'python >=3.8', 'simpleitk']",noarch,1690341888284.0,None-any-None,pyhd8ed1ab_0,2023-07-26 03:26:02.395000+00:00,1a968d56543c35dd3c102644d018c655,8f181af1bf1a3369b55e69690f7c6bb5bacfcd4fec5c2c77f0d3e8930904bed8,15238.0,conda-forge/napari-nifti/0.0.11/noarch/napari-nifti-0.0.11-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-nifti/0.0.11/noarch/napari-nifti-0.0.11-pyhd8ed1ab_0.conda,conda,0.0.11,conda-forge,['main'],conda,noarch/napari-nifti-0.0.12-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['numpy', 'python >=3.8', 'simpleitk']",Apache-2.0,python,1690342194483.0,2023-07-26 03:30:49.326000+00:00,0d4b7681cededda51b2fa5add79f794d,9605e5c0831b7f6d5032bd552781c0142baa0925a4248bdf5b5ad03bf763c433,15298.0,conda-forge/napari-nifti/0.0.12/noarch/napari-nifti-0.0.12-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-nifti/0.0.12/noarch/napari-nifti-0.0.12-pyhd8ed1ab_0.conda,conda,0.0.12,conda-forge,['main'],,napari-nifti.write_single_image,Save an image as Nifti with napari-nifti,napari_nifti._writer:write_single_image,,,,,,,,,,,,,,,,,,,,,,napari-nifti.write_single_image,['image'],,napari-nifti.write_single_image,['labels'],"['.gz', '.nii', '.nii.gz', '.nrrd']",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['.gz', '.nii', '.nii.gz', '.nrrd']",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +268,napari-nikon-nd2,0.1.3,napari-nikon-nd2,Opens Nikon ND2 files into napari.,Chris Wood,Apache Software License 2.0,https://github.com/cwood1967/napari-nikon-nd2,6200f059a3c32938bdb4a416,['conda'],,https://github.com/cwood1967/napari-nikon-nd2,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-nikon-nd2,http://api.anaconda.org/packages/conda-forge/napari-nikon-nd2,http://anaconda.org/conda-forge/napari-nikon-nd2,['0.1.3'],0.1.3,0.1.3,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.3,conda-forge/napari-nikon-nd2/0.1.3,1.0,0.0,2022-02-07 10:11:35.650000+00:00,2023-06-18 08:40:48.103000+00:00,conda,noarch/napari-nikon-nd2-0.1.3-pyhd8ed1ab_0.tar.bz2,0.0,Apache-2.0,False,python,"['napari-plugin-engine >=0.1.4', 'nd2reader', 'numpy', 'python >=3.6,<=3.9']",noarch,1644228651013.0,None-any-None,pyhd8ed1ab_0,2022-02-07 10:11:35.870000+00:00,bf7fba8bae235a96771af62ab47e42bb,None,14143.0,conda-forge/napari-nikon-nd2/0.1.3/noarch/napari-nikon-nd2-0.1.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-nikon-nd2/0.1.3/noarch/napari-nikon-nd2-0.1.3-pyhd8ed1ab_0.tar.bz2,conda,0.1.3,conda-forge,['main'],public,,0.2.1,napari-nikon-nd2.napari_get_reader,napari_get_reader,napari_nikon_nd2._reader:napari_get_reader,napari-nikon-nd2.napari_get_reader,['*'],True,2.1,napari-nikon-nd2,0.1.3,['UNKNOWN'],Opens Nikon ND2 files into napari.,"# napari-nikon-nd2 [![License](https://img.shields.io/pypi/l/napari-nikon-nd2.svg?color=green)](https://github.com/cwood1967/napari-nikon-nd2/blob/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-nikon-nd2.svg?color=green)](https://pypi.org/project/napari-nikon-nd2) @@ -27391,8 +28495,8 @@ the [Allen Institute IO] plugin as examples. [Allen Institute IO]: https://github.com/AllenCellModeling/napari-aicsimageio [Napari Delta Vision Reader]: https://github.com/tlambert03/napari-dv -",text/markdown,https://github.com/cwood1967/napari-nikon-nd2,Chris Wood,cwood1967@gmail.com,Apache Software License 2.0,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: Apache Software License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'nd2reader']",>=3.6,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -258,napari-nlm,0.0.4,napari NLM,NLM (non local means) denoising,Martin Weigert,BSD-3-Clause,https://github.com/maweigert/napari-nlm,64afa40803db71dc74a8a0ba,['conda'],,https://github.com/maweigert/napari-nlm,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-nlm,http://api.anaconda.org/packages/conda-forge/napari-nlm,http://anaconda.org/conda-forge/napari-nlm,['0.0.4'],0.0.4,0.0.4,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.4,conda-forge/napari-nlm/0.0.4,1.0,0.0,2023-07-13 07:13:09.615000+00:00,2023-07-13 07:13:12.382000+00:00,conda,noarch/napari-nlm-0.0.4-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['gputools', 'magicgui', 'napari', 'numpy <1.24', 'pyopencl', 'python >=3.8', 'qtpy', 'scikit-image']",noarch,1689232255354.0,None-any-None,pyhd8ed1ab_0,2023-07-13 07:13:10.073000+00:00,7e6f992eb9ec63807748684e40742c19,2730a2296d5158d50bc8a88d2c4df722db0c2d1fca9a44f32f204bb471d4ae00,11295.0,conda-forge/napari-nlm/0.0.4/noarch/napari-nlm-0.0.4-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-nlm/0.0.4/noarch/napari-nlm-0.0.4-pyhd8ed1ab_0.conda,conda,0.0.4,conda-forge,['main'],public,,0.2.1,napari-nlm.make_sample_data_2d,Load sample data from napari NLM,napari_nlm._sample_data:make_sample_data_2d,,,,2.1,napari-nlm,0.0.4,,NLM (non local means) denoising,"# napari-nlm +",text/markdown,https://github.com/cwood1967/napari-nikon-nd2,Chris Wood,cwood1967@gmail.com,Apache Software License 2.0,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: Apache Software License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'nd2reader']",>=3.6,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +269,napari-nlm,0.0.4,napari NLM,NLM (non local means) denoising,Martin Weigert,BSD-3-Clause,https://github.com/maweigert/napari-nlm,64afa40803db71dc74a8a0ba,['conda'],,https://github.com/maweigert/napari-nlm,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-nlm,http://api.anaconda.org/packages/conda-forge/napari-nlm,http://anaconda.org/conda-forge/napari-nlm,['0.0.4'],0.0.4,0.0.4,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.4,conda-forge/napari-nlm/0.0.4,1.0,0.0,2023-07-13 07:13:09.615000+00:00,2023-07-13 07:13:12.382000+00:00,conda,noarch/napari-nlm-0.0.4-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['gputools', 'magicgui', 'napari', 'numpy <1.24', 'pyopencl', 'python >=3.8', 'qtpy', 'scikit-image']",noarch,1689232255354.0,None-any-None,pyhd8ed1ab_0,2023-07-13 07:13:10.073000+00:00,7e6f992eb9ec63807748684e40742c19,2730a2296d5158d50bc8a88d2c4df722db0c2d1fca9a44f32f204bb471d4ae00,11295.0,conda-forge/napari-nlm/0.0.4/noarch/napari-nlm-0.0.4-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-nlm/0.0.4/noarch/napari-nlm-0.0.4-pyhd8ed1ab_0.conda,conda,0.0.4,conda-forge,['main'],public,,0.2.1,napari-nlm.make_sample_data_2d,Load sample data from napari NLM,napari_nlm._sample_data:make_sample_data_2d,,,,2.1,napari-nlm,0.0.4,,NLM (non local means) denoising,"# napari-nlm [![License BSD-3](https://img.shields.io/pypi/l/napari-nlm.svg)](https://github.com/maweigert/napari-nlm/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-nlm.svg)](https://pypi.org/project/napari-nlm) @@ -27432,8 +28536,8 @@ You can install `napari-nlm` via [pip]: Distributed under the terms of the [BSD-3] license, ""napari-nlm"" is free and open source software -",text/markdown,https://github.com/maweigert/napari-nlm,Martin Weigert,marweigert@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'pyopencl (==2022.1.5)', 'gputools', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/maweigert/napari-nlm/issues', 'Documentation, https://github.com/maweigert/napari-nlm#README.md', 'Source Code, https://github.com/maweigert/napari-nlm', 'User Support, https://github.com/maweigert/napari-nlm/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-nlm.make_sample_data_3d,Load sample data from napari NLM,napari_nlm._sample_data:make_sample_data_3d,napari-nlm.denoise_nlm,denoise_nlm,napari_nlm._widget:denoise_nlm,,,,napari-nlm.denoise_nlm,denoise_nlm,True,,,,,,,,,,,,,,,,,,,,napari-nlm.make_sample_data_2d,unique_id.1,2D (noisy bricks),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-nlm.make_sample_data_3d,unique_id.2,3D (noisy cells),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -259,napari-nucleaizer,0.2.5,Napari nucleAIzer plugin,A GUI interface for training and prediction using the nucleAIzer nuclei detection method.,Ervin Tasnadi,BSD-3,https://github.com/etasnadi/napari_nucleaizer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-nucleaizer.launch,Launch nucleAIzer widget,napari_nucleaizer.nucleaizer_widget:Nucleaizer,,,,2.1,napari-nucleaizer,0.2.5,,A GUI interface for training and prediction using the nucleAIzer nuclei detection method.,"# napari_nucleaizer +",text/markdown,https://github.com/maweigert/napari-nlm,Martin Weigert,marweigert@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'pyopencl (==2022.1.5)', 'gputools', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/maweigert/napari-nlm/issues', 'Documentation, https://github.com/maweigert/napari-nlm#README.md', 'Source Code, https://github.com/maweigert/napari-nlm', 'User Support, https://github.com/maweigert/napari-nlm/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-nlm.make_sample_data_3d,Load sample data from napari NLM,napari_nlm._sample_data:make_sample_data_3d,napari-nlm.denoise_nlm,denoise_nlm,napari_nlm._widget:denoise_nlm,,,,napari-nlm.denoise_nlm,denoise_nlm,True,,,,,,,,,,,,,,,,,,,,napari-nlm.make_sample_data_2d,unique_id.1,2D (noisy bricks),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-nlm.make_sample_data_3d,unique_id.2,3D (noisy cells),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +270,napari-nucleaizer,0.2.5,Napari nucleAIzer plugin,A GUI interface for training and prediction using the nucleAIzer nuclei detection method.,Ervin Tasnadi,BSD-3,https://github.com/etasnadi/napari_nucleaizer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-nucleaizer.launch,Launch nucleAIzer widget,napari_nucleaizer.nucleaizer_widget:Nucleaizer,,,,2.1,napari-nucleaizer,0.2.5,,A GUI interface for training and prediction using the nucleAIzer nuclei detection method.,"# napari_nucleaizer [![License](https://img.shields.io/pypi/l/napari-nucleaizer.svg?color=green)](https://github.com/etasnadi/napari-nucleaizer/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-nucleaizer.svg?color=green)](https://pypi.org/project/napari-nucleaizer) @@ -27522,8 +28626,8 @@ Use the github issue tracker if you experinece unexpected behaviour. ## Contact You can contact me in [e-mail](mailto:tasnadi.ervin@MY-INSTITUTE) where MY-INSTITUTE is `brc.hu`. -",text/markdown,https://github.com/etasnadi/napari_nucleaizer,Ervin Tasnadi,tasnadi.ervin@brc.hu,BSD-3,"['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari', 'qtpy', 'jsonpickle', 'numpy', 'scikit-image', 'imageio', 'nucleaizer-backend']",>=3.8,"['Bug Tracker, https://github.com/etasnadi/napari_nucleaizer/issues', 'Documentation, https://napari-nucleaizer-docs.readthedocs.io/en/latest/index.html', 'Source Code, https://github.com/etasnadi/napari_nucleaizer', 'User Support, https://github.com/etasnadi/napari_nucleaizer/issues']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-nucleaizer.launch,Nuclei segmentation and training,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -260,napari-nyxus,0.2.0,napari-nyxus,A napari plugin for calculating features from intensity-label image data,Jesse McKinzie,,https://github.com/PolusAI/napari-nyxus,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-nyxus.nyxus_widget,Make nyxus widget with magic_factory,napari_nyxus.nyx:widget_factory,,,,2.1,napari-nyxus,0.2.0,,A napari plugin for calculating features from intensity-label image data,"# Nyxus Napari +",text/markdown,https://github.com/etasnadi/napari_nucleaizer,Ervin Tasnadi,tasnadi.ervin@brc.hu,BSD-3,"['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari', 'qtpy', 'jsonpickle', 'numpy', 'scikit-image', 'imageio', 'nucleaizer-backend']",>=3.8,"['Bug Tracker, https://github.com/etasnadi/napari_nucleaizer/issues', 'Documentation, https://napari-nucleaizer-docs.readthedocs.io/en/latest/index.html', 'Source Code, https://github.com/etasnadi/napari_nucleaizer', 'User Support, https://github.com/etasnadi/napari_nucleaizer/issues']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-nucleaizer.launch,Nuclei segmentation and training,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +271,napari-nyxus,0.2.0,napari-nyxus,A napari plugin for calculating features from intensity-label image data,Jesse McKinzie,,https://github.com/PolusAI/napari-nyxus,673dcf303ac8c8f35b796059,['conda'],,https://pypi.org/project/napari-nyxus,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-nyxus,http://api.anaconda.org/packages/conda-forge/napari-nyxus,http://anaconda.org/conda-forge/napari-nyxus,['0.2.0'],0.2.0,0.2.0,['noarch'],5.0,https://github.com/PolusAI/napari-nyxus,['pyh1ae75de_0'],0.2.0,conda-forge/napari-nyxus/0.2.0,1.0,0.0,2024-11-20 11:59:41.370000+00:00,2024-11-20 11:59:44.275000+00:00,conda,noarch/napari-nyxus-0.2.0-pyh1ae75de_0.conda,0.0,MIT,False,python,"['filepattern >=2.0.0', 'imagecodecs', 'magicgui', 'matplotlib-base', 'napari', 'napari-skimage-regionprops >=0.10.1', 'napari-workflows', 'numpy', 'nyxus >=0.5.0', 'pandas', 'python >=3.8', 'qtpy', 'superqt']",noarch,1732103702572.0,None-any-None,pyh1ae75de_0,2024-11-20 11:59:41.866000+00:00,cfa4e1eebc1f632796b59938763b58b6,fe832b988b363199b62576a2facf62fd9b3b91c110883d1a51568f457718299c,17700.0,conda-forge/napari-nyxus/0.2.0/noarch/napari-nyxus-0.2.0-pyh1ae75de_0.conda,//api.anaconda.org/download/conda-forge/napari-nyxus/0.2.0/noarch/napari-nyxus-0.2.0-pyh1ae75de_0.conda,conda,0.2.0,conda-forge,['main'],public,,0.2.1,napari-nyxus.nyxus_widget,Make nyxus widget with magic_factory,napari_nyxus.nyx:widget_factory,,,,2.1,napari-nyxus,0.2.0,,A napari plugin for calculating features from intensity-label image data,"# Nyxus Napari Nyxus Napari is a Napari plugin for running feature calculations on image-segmentation image pairs, using the Nyxus application to compute features. Nyxus is a feature-rich, highly optimized, Python/C++ application capable @@ -27643,8 +28747,8 @@ While Nyxus Napari provides batched processing for large sets of images where ea it does not provide functionality to handle large single images that do not fit into RAM or that are larger than the limitations of Napari. For large images, it is recommended to install the Python or CLI version of Nyxus. For more information, see https://github.com/PolusAI/nyxus. -",text/markdown,https://github.com/PolusAI/napari-nyxus,Jesse McKinzie,Jesse.McKinzie@axleinfo.com,,['Framework :: napari'],"['napari', 'pandas', 'numpy', 'nyxus >=0.5.0', 'imagecodecs', 'magicgui', 'napari-workflows', 'qtpy', 'superqt', 'napari-skimage-regionprops >=0.10.1', 'matplotlib', 'filepattern >=2.0.0']",,,,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-nyxus.nyxus_widget,Nyxus,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -261,napari-obj,1.0.0,obj file reader,A plugin to read .obj files,Léo Guignard,MIT,https://github.com/guignardlab/napari-obj,6436f2909779ec69ddde4eab,['conda'],,https://github.com/guignardlab/napari-obj,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-obj,http://api.anaconda.org/packages/conda-forge/napari-obj,http://anaconda.org/conda-forge/napari-obj,['1.0.0'],1.0.0,1.0.0,['noarch'],3.0,,['pyhd8ed1ab_0'],1.0.0,conda-forge/napari-obj/1.0.0,1.0,0.0,2023-04-12 18:03:58.501000+00:00,2023-06-18 17:28:00.150000+00:00,conda,noarch/napari-obj-1.0.0-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['numpy', 'python >=3.8']",noarch,1681322590046.0,None-any-None,pyhd8ed1ab_0,2023-04-12 18:03:58.739000+00:00,d5af8be9dd0012d58932a66222cb75a7,b3b843daa8b821b381d578fbe04a67f8ab357da6ec429eee6dcb14aefa8b9343,11761.0,conda-forge/napari-obj/1.0.0/noarch/napari-obj-1.0.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-obj/1.0.0/noarch/napari-obj-1.0.0-pyhd8ed1ab_0.conda,conda,1.0.0,conda-forge,['main'],public,,0.2.1,napari-obj.get_reader,Open data with .obj file reader,napari_obj._reader:napari_get_reader,napari-obj.get_reader,['*.obj'],False,2.1,napari-obj,1.0.0,,A plugin to read .obj files,"# napari-obj +",text/markdown,https://github.com/PolusAI/napari-nyxus,Jesse McKinzie,Jesse.McKinzie@axleinfo.com,,['Framework :: napari'],"['napari', 'pandas', 'numpy', 'nyxus >=0.5.0', 'imagecodecs', 'magicgui', 'napari-workflows', 'qtpy', 'superqt', 'napari-skimage-regionprops >=0.10.1', 'matplotlib', 'filepattern >=2.0.0']",,,,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-nyxus.nyxus_widget,Nyxus,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +272,napari-obj,1.0.0,obj file reader,A plugin to read .obj files,Léo Guignard,MIT,https://github.com/guignardlab/napari-obj,6436f2909779ec69ddde4eab,['conda'],,https://github.com/guignardlab/napari-obj,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-obj,http://api.anaconda.org/packages/conda-forge/napari-obj,http://anaconda.org/conda-forge/napari-obj,['1.0.0'],1.0.0,1.0.0,['noarch'],3.0,,['pyhd8ed1ab_0'],1.0.0,conda-forge/napari-obj/1.0.0,1.0,0.0,2023-04-12 18:03:58.501000+00:00,2023-06-18 17:28:00.150000+00:00,conda,noarch/napari-obj-1.0.0-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['numpy', 'python >=3.8']",noarch,1681322590046.0,None-any-None,pyhd8ed1ab_0,2023-04-12 18:03:58.739000+00:00,d5af8be9dd0012d58932a66222cb75a7,b3b843daa8b821b381d578fbe04a67f8ab357da6ec429eee6dcb14aefa8b9343,11761.0,conda-forge/napari-obj/1.0.0/noarch/napari-obj-1.0.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-obj/1.0.0/noarch/napari-obj-1.0.0-pyhd8ed1ab_0.conda,conda,1.0.0,conda-forge,['main'],public,,0.2.1,napari-obj.get_reader,Open data with .obj file reader,napari_obj._reader:napari_get_reader,napari-obj.get_reader,['*.obj'],False,2.1,napari-obj,1.0.0,,A plugin to read .obj files,"# napari-obj + +## Usage + +napari-phasors is composed of a few widgets that allow reading a few specific FLIM and hyperspectral file formats, perform phasor analysis, and display and export the results of manual phasor selections. + +### Sample Data + +Two sample datasets for FLIM are provided, along with their corresponding calibration images. Additionally, a paramecium image is included as sample data for hyperspectral analysis. + +![sample_data](https://github.com/napari-phasors/napari-phasors/raw/main/gifs/sample_data.gif) + +### Phasor Analysis + +#### Plot FLIM Data + +FLIM phasor data can be plotted as a 2D histogram or scatter plot. The colormap, the number of bins and the scale of the colors can be customized. +Filtering and thresholding can also be applied to process phasor data and the mean intensity image. + +![phasors_flim](https://github.com/napari-phasors/napari-phasors/raw/main/gifs/phasors_flim.gif) + +#### Plot Hyperspectral Data + +Hyperspectral phasor data can also be plotted as a 2D histogram or scatter plot and visualized in the full universal circle. + +![phasors_hyperspectral](https://github.com/napari-phasors/napari-phasors/raw/main/gifs/phasors_hyperspectral.gif) + +### Apparent Lifetime Display + +A FLIM image can be colormapped according to the phase or modulation apparent lifetime. A histogram is also created for visualization of the distribution of apparent lifetimes of the FLIM image. + +![lifetimes](https://github.com/napari-phasors/napari-phasors/raw/main/gifs/lifetimes.gif) + +### Phasor Calibration + +FLIM images can be calibrated using a reference image acquired under the same experimental parameters. This reference image should consist of a homogeneous solution of a fluorophore with a known fluorescence lifetime and the laser frequency used in the experiment. This ensures accuracy and consistency in lifetime measurements. + +![calibration](https://github.com/napari-phasors/napari-phasors/raw/main/gifs/calibration.gif) + +### Phasor Custom Import + +Supported file formats (`.tif`, `.ptu`, `.sdt`, `.fbd`, `.lsm`, `.ome.tif`) can be read and transformed to the phasor space. Additional options, such as the harmonics, channels and frames, can be specified depending on the file format to be read. + +![custom_import](https://github.com/napari-phasors/napari-phasors/raw/main/gifs/custom_import.gif) + +### Phasor Export + +The average intensity image and the phasor coordinates can be exported as OME-TIF files that can be read by napari-phasors and PhasorPy. Alternatively, the phasor coordinates, as well as the selections (cursors) can be exported as a CSV file. + +![export_phasors](https://github.com/napari-phasors/napari-phasors/raw/main/gifs/export_phasors.gif) + +## Installation + +You can install `napari-phasors` via [pip]. Follow these steps from a terminal. + +We recommend using `miniforge` whenever possible. Click [here](https://github.com/conda-forge/miniforge?tab=readme-ov-file#miniforge) to choose the right download option for your OS. +**If you do not use `miniforge`, but rather Anaconda or Miniconda, replace the `mamba` term whenever you see it below with `conda`.** + +Create a conda environment with napari by typing : + + mamba create -n napari-phasors-env napari pyqt python=3.10 + +Activate the environment : + + mamba activate napari-phasors-env + +Install `napari-phasors` via [pip] : + + pip install napari-phasors + +Alternatively, install latest development version with : + + pip install git+https://github.com/napari-phasors/napari-phasors.git + +## Contributing + +Contributions are very welcome. Tests can be run with [tox], please ensure +the coverage at least stays the same before you submit a pull request. + +## License + +Distributed under the terms of the [BSD-3] license, +""napari-phasors"" is free and open source software + +## Issues + +If you encounter any problems, please [file an issue] along with a detailed description. + +[napari]: https://github.com/napari/napari +[Cookiecutter]: https://github.com/audreyr/cookiecutter +[@napari]: https://github.com/napari +[MIT]: http://opensource.org/licenses/MIT +[BSD-3]: http://opensource.org/licenses/BSD-3-Clause +[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt +[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt +[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0 +[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt +[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin + +[file an issue]: https://github.com/napari-phasors/napari-phasors/issues + +[napari]: https://github.com/napari/napari +[tox]: https://tox.readthedocs.io/en/latest/ +[pip]: https://pypi.org/project/pip/ +[PyPI]: https://pypi.org/ +",text/markdown,https://github.com/napari-phasors/napari-phasors,"Bruno Pannunzio, Marcelo L. Zoccoler, Bruno Schuty","bpannunzio@pasteur.edu.uy, marzoccoler@gmail.com, schutyb@schutyb.com",BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['phasorpy', 'qtpy', 'scikit-image', 'biaplotter>=0.0.5a2', 'lfdfiles', 'sdtfile', 'ptufile', 'tifffile', 'pandas', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'qtpy; extra == ""testing""', 'scikit-image; extra == ""testing""', 'biaplotter>=0.0.5a0; extra == ""testing""', 'PyQt5; extra == ""testing""', 'pandas; extra == ""testing""', 'black; extra == ""testing""', 'isort; extra == ""testing""', 'phasorpy; extra == ""testing""', 'tifffile; extra == ""testing""', 'lfdfiles; extra == ""testing""', 'sdtfile; extra == ""testing""', 'ptufile; extra == ""testing""']",>=3.10,"['Bug Tracker, https://github.com/napari-phasors/napari-phasors/issues', 'Documentation, https://github.com/napari-phasors/napari-phasors#README.md', 'Source Code, https://github.com/napari-phasors/napari-phasors', 'User Support, https://github.com/napari-phasors/napari-phasors/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",napari-phasors.convallaria_FLIM_sample_data,Load convallaria FLIM sample data,napari_phasors._sample_data:convallaria_FLIM_sample_data,napari-phasors.embryo_FLIM_sample_data,Load FLUTE's FLIM Embryo sample data,napari_phasors._sample_data:embryo_FLIM_sample_data,napari-phasors.paramecium_HSI_sample_data,Load Paramecium Hyperspectral Image sample data,napari_phasors._sample_data:paramecium_HSI_sample_data,napari-phasors.PhasorTransform,Phasor Custom Import,False,napari-phasors.CalibrationWidget,Calibration Widget,False,napari-phasors.plot_phasor,Phasor Plot,False,napari-phasors.LifetimeWidget,Lifetime Widget,False,napari-phasors.plot_phasor,Plot Phasor,napari_phasors:PlotterWidget,napari-phasors.write_ome_tiff,"['image*', 'labels*']",Export Phasor to OME-TIFF,,,,,napari-phasors.convallaria_FLIM_sample_data,unique_id.1,Convallaria FLIM,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-phasors.embryo_FLIM_sample_data,unique_id.2,FLUTE's FLIM Embryo sample data FLIM,napari-phasors.write_ome_tiff,Write OME-TIFF,napari_phasors:write_ome_tiff,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-phasors.PhasorTransform,Phasor Custom Import,napari_phasors:PhasorTransform,napari-phasors.CalibrationWidget,Calibration Widget,napari_phasors:CalibrationWidget,napari-phasors.WriterWidget,Export Phasor,napari_phasors:WriterWidget,napari-phasors.LifetimeWidget,Plot lifetime image,napari_phasors:LifetimeWidget,,,,,napari-phasors.WriterWidget,Export Phasor,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-phasors.paramecium_HSI_sample_data,unique_id.3,Paramecium Hyperspectral Image +288,napari-PHILOW,0.2.0,napari-PHILOW,PHILOW is an interactive deep learning-based platform for 3D datasets,Hiroki Kawai,GPLv3,https://github.com/neurobiology-ut/PHILOW,62fe5722ee640d4bbdface57,['conda'],,https://github.com/neurobiology-ut/PHILOW,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-philow,http://api.anaconda.org/packages/conda-forge/napari-philow,http://anaconda.org/conda-forge/napari-philow,"['0.0.1', '0.1.0', '0.1.1', '0.2.0']",0.2.0,0.2.0,['noarch'],13.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-philow/0.0.1,1.0,0.0,2022-08-18 15:13:35.754000+00:00,2024-05-21 02:07:16.007000+00:00,conda,noarch/napari-philow-0.0.1-pyhd8ed1ab_0.tar.bz2,0.0,GPL-3.0-only,False,python,"['dask-image', 'matplotlib-base', 'napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'opencv', 'pandas', 'python >=3.7', 'scikit-image', 'tensorflow']",noarch,1660835412264.0,None-any-None,pyhd8ed1ab_0,2022-08-18 15:13:36.195000+00:00,cf7b7a61be665cb2f294b4e495e9433b,50f4a23a7c5087bf1b3d9ededc3feec2c235018298d37a263adbdc97f37ca0d2,35895.0,conda-forge/napari-philow/0.0.1/noarch/napari-philow-0.0.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-philow/0.0.1/noarch/napari-philow-0.0.1-pyhd8ed1ab_0.tar.bz2,conda,0.0.1,conda-forge,['main'],public,,0.2.0,napari-PHILOW.AnnotationMode,Create Annotation Mode,napari_philow._annotation:AnnotationMode,,,,2.1,napari-PHILOW,0.2.0,,PHILOW is an interactive deep learning-based platform for 3D datasets,"# napari-PHILOW [![License](https://img.shields.io/pypi/l/napari-PHILOW.svg?color=green)](https://github.com/neurobiology-ut/PHILOW/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-PHILOW.svg?color=green)](https://pypi.org/project/napari-PHILOW) @@ -29176,8 +30407,8 @@ Shogo Suga, Koki Nakamura, Yu Nakanishi, Bruno M Humbel, Hiroki Kawai, Yusuke Hi [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/neurobiology-ut/PHILOW,Hiroki Kawai,h.kawai888@gmail.com,GPLv3,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'scikit-image', 'dask-image', 'opencv-python', 'matplotlib', 'pandas', 'torch', 'torchvision', 'segmentation-models-pytorch', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/neurobiology-ut/PHILOW/issues', 'Documentation, https://github.com/neurobiology-ut/PHILOW#README.md', 'Source Code, https://github.com/neurobiology-ut/PHILOW', 'User Support, https://github.com/neurobiology-ut/PHILOW/issues']",['testing'],False,0.1.0,conda-forge/napari-philow/0.1.0,0.1.1,conda-forge/napari-philow/0.1.1,0.2.0,conda-forge/napari-philow/0.2.0,conda,noarch/napari-philow-0.1.0-pyhd8ed1ab_0.conda,0.0,GPL-3.0-only,False,python,"['dask-image', 'matplotlib-base', 'napari', 'numpy', 'opencv', 'pandas', 'python >=3.7', 'pytorch', 'scikit-image', 'segmentation-models-pytorch', 'torchvision']",pyhd8ed1ab_0,1682254527129.0,None-any-None,noarch,2023-04-23 12:58:25.026000+00:00,43441a63504cdf13ee86f30acd2d9c03,c0a0ef3bc1f06076fd04000d44b474ba8c00a943a100b884b6e258824e523471,40981.0,conda-forge/napari-philow/0.1.0/noarch/napari-philow-0.1.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-philow/0.1.0/noarch/napari-philow-0.1.0-pyhd8ed1ab_0.conda,conda,0.1.0,conda-forge,['main'],conda,noarch/napari-philow-0.1.1-pyhd8ed1ab_0.conda,0.0,GPL-3.0-only,False,python,"['dask', 'dask-image', 'matplotlib-base', 'napari', 'numpy', 'opencv', 'pandas', 'pyqt', 'python >=3.7', 'pytorch', 'scikit-image', 'segmentation-models-pytorch', 'torchvision']",noarch,1712132330751.0,None-any-None,pyhd8ed1ab_0,2024-04-03 08:22:43.376000+00:00,a4ed887d8707430ccbdef82287de114c,69b99bafd878aa86a2c8f5df2527e0abfcf65dcc0de983fa16426a7ffcbc9cc0,41361.0,conda-forge/napari-philow/0.1.1/noarch/napari-philow-0.1.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-philow/0.1.1/noarch/napari-philow-0.1.1-pyhd8ed1ab_0.conda,conda,0.1.1,conda-forge,['main'],conda,noarch/napari-philow-0.2.0-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['dask', 'dask-image', 'matplotlib-base', 'napari', 'numpy', 'opencv', 'pandas', 'pyqt', 'python >=3.7', 'pytorch', 'scikit-image', 'segmentation-models-pytorch', 'torchvision']",GPL-3.0-only,python,1716256966625.0,2024-05-21 02:07:14.584000+00:00,74e99669fec616fa27919d4533aacf0f,a49bf2da1842a44ef56ed0797023ea8cc1fbe3045e68e4c21444bac2ffee1718,44013.0,conda-forge/napari-philow/0.2.0/noarch/napari-philow-0.2.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-philow/0.2.0/noarch/napari-philow-0.2.0-pyhd8ed1ab_0.conda,conda,0.2.0,conda-forge,['main'],,napari-PHILOW.Trainer,Create Trainer,napari_philow._trainer:Trainer,napari-PHILOW.Predicter,Create Predicter,napari_philow._prediction:Predicter,napari-PHILOW.Selector,Create Selector,napari_philow._selector:Selector,napari-PHILOW.AnnotationMode,Annotation Mode,False,napari-PHILOW.Trainer,Trainer,False,napari-PHILOW.Predicter,Predicter,False,napari-PHILOW.Selector,Selector,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -277,napari-PICASSO,0.3.0,napari-PICASSO,Blind fluorescence unmixing,Kunal Pandit,GPL-3.0-only,https://github.com/nygctech/PICASSO,62c69da8504465068cec7ae7,['conda'],,https://github.com/nygctech/PICASSO,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-picasso,http://api.anaconda.org/packages/conda-forge/napari-picasso,http://anaconda.org/conda-forge/napari-picasso,['0.3.0'],0.3.0,0.3.0,['noarch'],3.0,,['pyhd8ed1ab_0'],0.3.0,conda-forge/napari-picasso/0.3.0,1.0,0.0,2022-07-07 08:47:33.480000+00:00,2023-06-18 08:42:02.362000+00:00,conda,noarch/napari-picasso-0.3.0-pyhd8ed1ab_0.tar.bz2,0.0,GPL-3.0-or-later,False,python,"['dask-core', 'magicgui', 'napari', 'numpy', 'psutil', 'python >=3.8', 'pytorch', 'qtpy']",noarch,1657183455765.0,None-any-None,pyhd8ed1ab_0,2022-07-07 08:47:33.928000+00:00,54c26bdd88cae5931b5504e717c50e74,None,41320.0,conda-forge/napari-picasso/0.3.0/noarch/napari-picasso-0.3.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-picasso/0.3.0/noarch/napari-picasso-0.3.0-pyhd8ed1ab_0.tar.bz2,conda,0.3.0,conda-forge,['main'],public,,0.2.1,napari-PICASSO.PicassoWidget,PICASSO,napari_picasso.main_widget:PicassoWidget,,,,2.1,napari-PICASSO,0.3.0,,Blind fluorescence unmixing,"# napari-PICASSO +",text/markdown,https://github.com/neurobiology-ut/PHILOW,Hiroki Kawai,h.kawai888@gmail.com,GPLv3,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'scikit-image', 'dask-image', 'opencv-python', 'matplotlib', 'pandas', 'torch', 'torchvision', 'segmentation-models-pytorch', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/neurobiology-ut/PHILOW/issues', 'Documentation, https://github.com/neurobiology-ut/PHILOW#README.md', 'Source Code, https://github.com/neurobiology-ut/PHILOW', 'User Support, https://github.com/neurobiology-ut/PHILOW/issues']",['testing'],False,0.1.0,conda-forge/napari-philow/0.1.0,0.1.1,conda-forge/napari-philow/0.1.1,0.2.0,conda-forge/napari-philow/0.2.0,conda,noarch/napari-philow-0.1.0-pyhd8ed1ab_0.conda,0.0,GPL-3.0-only,False,python,"['dask-image', 'matplotlib-base', 'napari', 'numpy', 'opencv', 'pandas', 'python >=3.7', 'pytorch', 'scikit-image', 'segmentation-models-pytorch', 'torchvision']",pyhd8ed1ab_0,1682254527129.0,None-any-None,noarch,2023-04-23 12:58:25.026000+00:00,43441a63504cdf13ee86f30acd2d9c03,c0a0ef3bc1f06076fd04000d44b474ba8c00a943a100b884b6e258824e523471,40981.0,conda-forge/napari-philow/0.1.0/noarch/napari-philow-0.1.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-philow/0.1.0/noarch/napari-philow-0.1.0-pyhd8ed1ab_0.conda,conda,0.1.0,conda-forge,['main'],conda,noarch/napari-philow-0.1.1-pyhd8ed1ab_0.conda,0.0,GPL-3.0-only,False,python,"['dask', 'dask-image', 'matplotlib-base', 'napari', 'numpy', 'opencv', 'pandas', 'pyqt', 'python >=3.7', 'pytorch', 'scikit-image', 'segmentation-models-pytorch', 'torchvision']",noarch,1712132330751.0,None-any-None,pyhd8ed1ab_0,2024-04-03 08:22:43.376000+00:00,a4ed887d8707430ccbdef82287de114c,69b99bafd878aa86a2c8f5df2527e0abfcf65dcc0de983fa16426a7ffcbc9cc0,41361.0,conda-forge/napari-philow/0.1.1/noarch/napari-philow-0.1.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-philow/0.1.1/noarch/napari-philow-0.1.1-pyhd8ed1ab_0.conda,conda,0.1.1,conda-forge,['main'],conda,noarch/napari-philow-0.2.0-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['dask', 'dask-image', 'matplotlib-base', 'napari', 'numpy', 'opencv', 'pandas', 'pyqt', 'python >=3.7', 'pytorch', 'scikit-image', 'segmentation-models-pytorch', 'torchvision']",GPL-3.0-only,python,1716256966625.0,2024-05-21 02:07:14.584000+00:00,74e99669fec616fa27919d4533aacf0f,a49bf2da1842a44ef56ed0797023ea8cc1fbe3045e68e4c21444bac2ffee1718,44013.0,conda-forge/napari-philow/0.2.0/noarch/napari-philow-0.2.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-philow/0.2.0/noarch/napari-philow-0.2.0-pyhd8ed1ab_0.conda,conda,0.2.0,conda-forge,['main'],,napari-PHILOW.Trainer,Create Trainer,napari_philow._trainer:Trainer,napari-PHILOW.Predicter,Create Predicter,napari_philow._prediction:Predicter,napari-PHILOW.Selector,Create Selector,napari_philow._selector:Selector,napari-PHILOW.AnnotationMode,Annotation Mode,False,napari-PHILOW.Trainer,Trainer,False,napari-PHILOW.Predicter,Predicter,False,napari-PHILOW.Selector,Selector,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +289,napari-PICASSO,0.3.0,napari-PICASSO,Blind fluorescence unmixing,Kunal Pandit,GPL-3.0-only,https://github.com/nygctech/PICASSO,62c69da8504465068cec7ae7,['conda'],,https://github.com/nygctech/PICASSO,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-picasso,http://api.anaconda.org/packages/conda-forge/napari-picasso,http://anaconda.org/conda-forge/napari-picasso,['0.3.0'],0.3.0,0.3.0,['noarch'],3.0,,['pyhd8ed1ab_0'],0.3.0,conda-forge/napari-picasso/0.3.0,1.0,0.0,2022-07-07 08:47:33.480000+00:00,2023-06-18 08:42:02.362000+00:00,conda,noarch/napari-picasso-0.3.0-pyhd8ed1ab_0.tar.bz2,0.0,GPL-3.0-or-later,False,python,"['dask-core', 'magicgui', 'napari', 'numpy', 'psutil', 'python >=3.8', 'pytorch', 'qtpy']",noarch,1657183455765.0,None-any-None,pyhd8ed1ab_0,2022-07-07 08:47:33.928000+00:00,54c26bdd88cae5931b5504e717c50e74,None,41320.0,conda-forge/napari-picasso/0.3.0/noarch/napari-picasso-0.3.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-picasso/0.3.0/noarch/napari-picasso-0.3.0-pyhd8ed1ab_0.tar.bz2,conda,0.3.0,conda-forge,['main'],public,,0.2.1,napari-PICASSO.PicassoWidget,PICASSO,napari_picasso.main_widget:PicassoWidget,,,,2.1,napari-PICASSO,0.3.0,,Blind fluorescence unmixing,"# napari-PICASSO [![License](https://img.shields.io/pypi/l/napari-curtain.svg?color=green)](https://github.com/nygctech/PICASSO/blob/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-PICASSO.svg?color=green)](https://pypi.org/project/napari-PICASSO) @@ -29228,8 +30459,8 @@ PICASSO is an algorithm to remove spillover fluorescence by minimizing the mutua [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/nygctech/PICASSO,Kunal Pandit,kpandit@nygenome.org,GPL-3.0-only,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']","['numpy', 'magicgui', 'qtpy', 'dask', 'psutil', ""tox ; extra == 'testing'"", ""napari[all] ; extra == 'testing'"", ""torch ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""xarray ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/nygctech/PICASSO/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-PICASSO.PicassoWidget,PICASSO,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -278,napari-pixel-correction,0.1.4,Pixel correction,Plugin to correct manually pixel wrongly predicted on image by annotation,Herearii Metuarea,BSD-3-Clause,https://github.com/hereariim/napari-pixel-correction,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-pixel-correction.get_reader,Open data with Pixel correction,napari_pixel_correction._reader:napari_get_reader,napari-pixel-correction.get_reader,['*.npy'],False,2.1,napari-pixel-correction,0.1.4,,Plugin to correct manually pixel wrongly predicted on image by annotation,"# napari-pixel-correction +",text/markdown,https://github.com/nygctech/PICASSO,Kunal Pandit,kpandit@nygenome.org,GPL-3.0-only,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']","['numpy', 'magicgui', 'qtpy', 'dask', 'psutil', ""tox ; extra == 'testing'"", ""napari[all] ; extra == 'testing'"", ""torch ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""xarray ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/nygctech/PICASSO/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-PICASSO.PicassoWidget,PICASSO,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +290,napari-pixel-correction,0.1.4,Pixel correction,Plugin to correct manually pixel wrongly predicted on image by annotation,Herearii Metuarea,BSD-3-Clause,https://github.com/hereariim/napari-pixel-correction,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-pixel-correction.get_reader,Open data with Pixel correction,napari_pixel_correction._reader:napari_get_reader,napari-pixel-correction.get_reader,['*.npy'],False,2.1,napari-pixel-correction,0.1.4,,Plugin to correct manually pixel wrongly predicted on image by annotation,"# napari-pixel-correction [![License BSD-3](https://img.shields.io/pypi/l/napari-pixel-correction.svg?color=green)](https://github.com/hereariim/napari-pixel-correction/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-pixel-correction.svg?color=green)](https://pypi.org/project/napari-pixel-correction) @@ -29325,8 +30556,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/hereariim/napari-pixel-correction,Herearii Metuarea,herearii.metuarea@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', 'napari', 'matplotlib', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/hereariim/napari-pixel-correction/issues', 'Documentation, https://github.com/hereariim/napari-pixel-correction#README.md', 'Source Code, https://github.com/hereariim/napari-pixel-correction', 'User Support, https://github.com/hereariim/napari-pixel-correction/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-pixel-correction.write_multiple,Save multi-layer data with Pixel correction,napari_pixel_correction._writer:write_multiple,napari-pixel-correction.write_single_image,Save image data with Pixel correction,napari_pixel_correction._writer:write_single_image,napari-pixel-correction.load,Load image,napari_pixel_correction._widget:process_function_load,napari-pixel-correction.load,Load image,False,napari-pixel-correction.save_label,Save label,False,napari-pixel-correction.save_as_zip,Save zip,False,,,,napari-pixel-correction.save_label,Save label,napari_pixel_correction._widget:save_modification,napari-pixel-correction.write_multiple,"['image*', 'labels*']",,napari-pixel-correction.write_single_image,['image'],['.npy'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-pixel-correction.save_as_zip,Save zip,napari_pixel_correction._widget:save_as_zip,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -279,napari-PixSeq,1.0.3,PixSeq,A Napari plugin for extracting time series traces from Single Molecule Localisation Microsocpy (SMLM) data.,Piers Turner,MIT,https://github.com/piedrro/napari-PixSeq,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-PixSeq.make_qwidget,Make a QWidget,napari_pixseq:PixSeqWidget,,,,2.1,napari-PixSeq,1.0.3,,A Napari plugin for extracting time series traces from Single Molecule Localisation Microsocpy (SMLM) data.,"# napari-PixSeq +",text/markdown,https://github.com/hereariim/napari-pixel-correction,Herearii Metuarea,herearii.metuarea@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', 'napari', 'matplotlib', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/hereariim/napari-pixel-correction/issues', 'Documentation, https://github.com/hereariim/napari-pixel-correction#README.md', 'Source Code, https://github.com/hereariim/napari-pixel-correction', 'User Support, https://github.com/hereariim/napari-pixel-correction/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-pixel-correction.write_multiple,Save multi-layer data with Pixel correction,napari_pixel_correction._writer:write_multiple,napari-pixel-correction.write_single_image,Save image data with Pixel correction,napari_pixel_correction._writer:write_single_image,napari-pixel-correction.load,Load image,napari_pixel_correction._widget:process_function_load,napari-pixel-correction.load,Load image,False,napari-pixel-correction.save_label,Save label,False,napari-pixel-correction.save_as_zip,Save zip,False,,,,napari-pixel-correction.save_label,Save label,napari_pixel_correction._widget:save_modification,napari-pixel-correction.write_multiple,"['image*', 'labels*']",,napari-pixel-correction.write_single_image,['image'],['.npy'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-pixel-correction.save_as_zip,Save zip,napari_pixel_correction._widget:save_as_zip,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +291,napari-PixSeq,1.0.3,PixSeq,A Napari plugin for extracting time series traces from Single Molecule Localisation Microsocpy (SMLM) data.,Piers Turner,MIT,https://github.com/piedrro/napari-PixSeq,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-PixSeq.make_qwidget,Make a QWidget,napari_pixseq:PixSeqWidget,,,,2.1,napari-PixSeq,1.0.3,,A Napari plugin for extracting time series traces from Single Molecule Localisation Microsocpy (SMLM) data.,"# napari-PixSeq [![License MIT](https://img.shields.io/pypi/l/napari-GapSeq2.svg?color=green)](https://github.com/piedrro/napari-PixSeq/blob/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-GapSeq2.svg?color=green)](https://pypi.org/project/napari-PixSeq/) @@ -29401,8 +30632,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/piedrro/napari-PixSeq,Piers Turner,piers.turner@physics.ox.ac.uk,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['napari[all]', 'numpy', 'magicgui', 'qtpy', 'scipy', 'pyqtgraph', 'picassosr', 'pandas', 'matplotlib', 'opencv-python', 'tqdm', 'originpro', 'pyqt5-tools', 'torch', 'cellpose >=3.0.1', 'omnipose', 'trackpy', 'shapely', 'astropy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/piedrro/napari-PixSeq/issues', 'Documentation, https://github.com/piedrro/napari-PixSeq#README.md', 'Source Code, https://github.com/piedrro/napari-PixSeq', 'User Support, https://github.com/piedrro/napari-PixSeq/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",,,,,,,,,,napari-PixSeq.make_qwidget,PixSeq,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -280,napari-plot,0.1.5,napari-plot,Plugin providing support for 1d plotting in napari.,Lukasz G. Migas,BSD-3,https://github.com/lukasz-migas/napari-1d,61fd019a27bdd9a91cdccead,['conda'],,https://github.com/lukasz-migas/napari-1d,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-plot,http://api.anaconda.org/packages/conda-forge/napari-plot,http://anaconda.org/conda-forge/napari-plot,"['0.1.2', '0.1.4', '0.1.4.5', '0.1.5']",0.1.5,0.1.5,['noarch'],6.0,,['pyhd8ed1ab_0'],0.1.2,conda-forge/napari-plot/0.1.2,1.0,0.0,2022-02-04 10:36:08.937000+00:00,2023-06-18 08:40:46.575000+00:00,conda,noarch/napari-plot-0.1.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari 0.4.12', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'qtawesome', 'qtpy']",noarch,1643970815745.0,None-any-None,pyhd8ed1ab_0,2022-02-04 10:36:09.201000+00:00,e5ce13b686218262f778303b41157997,None,91158.0,conda-forge/napari-plot/0.1.2/noarch/napari-plot-0.1.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-plot/0.1.2/noarch/napari-plot-0.1.2-pyhd8ed1ab_0.tar.bz2,conda,0.1.2,conda-forge,['main'],public,,0.2.1,napari-plot.NapariPlotWidget,NapariPlotWidget,napari_plot._dock_widget:NapariPlotWidget,,,,2.1,napari-plot,0.1.5,['UNKNOWN'],Plugin providing support for 1d plotting in napari.,"# napari-plot +",text/markdown,https://github.com/piedrro/napari-PixSeq,Piers Turner,piers.turner@physics.ox.ac.uk,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['napari[all]', 'numpy', 'magicgui', 'qtpy', 'scipy', 'pyqtgraph', 'picassosr', 'pandas', 'matplotlib', 'opencv-python', 'tqdm', 'originpro', 'pyqt5-tools', 'torch', 'cellpose >=3.0.1', 'omnipose', 'trackpy', 'shapely', 'astropy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/piedrro/napari-PixSeq/issues', 'Documentation, https://github.com/piedrro/napari-PixSeq#README.md', 'Source Code, https://github.com/piedrro/napari-PixSeq', 'User Support, https://github.com/piedrro/napari-PixSeq/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",,,,,,,,,,napari-PixSeq.make_qwidget,PixSeq,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +292,napari-plot,0.1.5,napari-plot,Plugin providing support for 1d plotting in napari.,Lukasz G. Migas,BSD-3,https://github.com/lukasz-migas/napari-1d,61fd019a27bdd9a91cdccead,['conda'],,https://github.com/lukasz-migas/napari-1d,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-plot,http://api.anaconda.org/packages/conda-forge/napari-plot,http://anaconda.org/conda-forge/napari-plot,"['0.1.2', '0.1.4', '0.1.4.5', '0.1.5']",0.1.5,0.1.5,['noarch'],6.0,,['pyhd8ed1ab_0'],0.1.2,conda-forge/napari-plot/0.1.2,1.0,0.0,2022-02-04 10:36:08.937000+00:00,2023-06-18 08:40:46.575000+00:00,conda,noarch/napari-plot-0.1.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari 0.4.12', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'qtawesome', 'qtpy']",noarch,1643970815745.0,None-any-None,pyhd8ed1ab_0,2022-02-04 10:36:09.201000+00:00,e5ce13b686218262f778303b41157997,None,91158.0,conda-forge/napari-plot/0.1.2/noarch/napari-plot-0.1.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-plot/0.1.2/noarch/napari-plot-0.1.2-pyhd8ed1ab_0.tar.bz2,conda,0.1.2,conda-forge,['main'],public,,0.2.1,napari-plot.NapariPlotWidget,NapariPlotWidget,napari_plot._dock_widget:NapariPlotWidget,,,,2.1,napari-plot,0.1.5,['UNKNOWN'],Plugin providing support for 1d plotting in napari.,"# napari-plot [![License](https://img.shields.io/pypi/l/napari-plot.svg?color=green)](https://github.com/lukasz-migas/napari-1d/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-plot.svg?color=green)](https://pypi.org/project/napari-plot) @@ -29521,8 +30752,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/lukasz-migas/napari-1d,Lukasz G. Migas,lukas.migas@yahoo.com,BSD-3,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'qtpy', 'qtawesome', 'napari (<0.4.15,>=0.4.13)', 'matplotlib', 'vispy (>=0.9.6)', ""PySide2 (!=5.15.0,>=5.13.2) ; extra == 'all'"", ""pre-commit (>=2.9.0) ; extra == 'dev'"", ""black (==22.1.0) ; extra == 'dev'"", ""flake8 (==4.0.1) ; extra == 'dev'"", ""PySide2 (!=5.15.0,>=5.13.2) ; extra == 'dev'"", ""pytest ; extra == 'dev'"", ""pytest-qt ; extra == 'dev'"", ""scikit-image ; extra == 'dev'"", ""PyQt5 (!=5.15.0,>=5.12.3) ; extra == 'pyqt'"", ""PyQt5 (!=5.15.0,>=5.12.3) ; extra == 'pyqt5'"", ""PySide2 (!=5.15.0,>=5.13.2) ; extra == 'pyside'"", ""PySide2 (!=5.15.0,>=5.13.2) ; extra == 'pyside2'"", ""PyQt5 (!=5.15.0,>=5.12.3) ; extra == 'qt'"", ""pytest ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""scikit-image ; extra == 'testing'""]",>=3.7,"['Bug Tracker, https://github.com/lukasz-migas/napari-1d/issues', 'Documentation, https://github.com/lukasz-migas/napari-1d#README.md', 'Source Code, https://github.com/lukasz-migas/napari-1d', 'User Support, https://github.com/lukasz-migas/napari-1d/issues']","['all', 'dev', 'pyqt', 'pyqt5', 'pyside', 'pyside2', 'qt', 'testing']",True,0.1.4,conda-forge/napari-plot/0.1.4,0.1.4.5,conda-forge/napari-plot/0.1.4.5,0.1.5,conda-forge/napari-plot/0.1.5,conda,noarch/napari-plot-0.1.4-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari 0.4.14', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'qtawesome', 'qtpy']",pyhd8ed1ab_0,1644247258138.0,None-any-None,noarch,2022-02-07 15:23:26.252000+00:00,cb577e438db6c19f9c6265ec4cd29a16,None,96137.0,conda-forge/napari-plot/0.1.4/noarch/napari-plot-0.1.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-plot/0.1.4/noarch/napari-plot-0.1.4-pyhd8ed1ab_0.tar.bz2,conda,0.1.4,conda-forge,['main'],conda,noarch/napari-plot-0.1.4.5-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari 0.4.14', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'qtawesome', 'qtpy']",noarch,1647503661913.0,None-any-None,pyhd8ed1ab_0,2022-03-17 07:56:25.099000+00:00,9ad7461a0087984d4fcb1d6db75326e0,None,103658.0,conda-forge/napari-plot/0.1.4.5/noarch/napari-plot-0.1.4.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-plot/0.1.4.5/noarch/napari-plot-0.1.4.5-pyhd8ed1ab_0.tar.bz2,conda,0.1.4.5,conda-forge,['main'],conda,noarch/napari-plot-0.1.5-pyhd8ed1ab_0.tar.bz2,None-any-None,True,noarch,pyhd8ed1ab_0,0.0,"['napari 0.4.14', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'qtawesome', 'qtpy']",BSD-3-Clause,python,1647985768352.0,2022-03-22 21:51:35.207000+00:00,499f6324069f25b7b46eddc1fa17fabf,None,107324.0,conda-forge/napari-plot/0.1.5/noarch/napari-plot-0.1.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-plot/0.1.5/noarch/napari-plot-0.1.5-pyhd8ed1ab_0.tar.bz2,conda,0.1.5,conda-forge,['main'],,,,,,,,,,,napari-plot.NapariPlotWidget,NapariPlotWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -281,napari-plot-profile,0.2.2,napari-plot-profile,Plot intensity along a line and create topographical views in napari,"Robert Haase, Marcelo Leomil Zoccoler",BSD-3-Clause,https://github.com/haesleinhuepf/napari-plot-profile,61fe751a39552dcb59597d81,['conda'],,https://github.com/haesleinhuepf/napari-plot-profile,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-plot-profile,http://api.anaconda.org/packages/conda-forge/napari-plot-profile,http://anaconda.org/conda-forge/napari-plot-profile,"['0.2.1', '0.2.2']",0.2.2,0.2.2,['noarch'],4.0,,['pyhd8ed1ab_0'],0.2.1,conda-forge/napari-plot-profile/0.2.1,1.0,0.0,2022-02-05 13:01:11.503000+00:00,2023-06-18 08:40:47.573000+00:00,conda,noarch/napari-plot-profile-0.2.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.4', 'napari-tools-menu', 'numpy', 'pyqtgraph', 'python >=3.7']",noarch,1644065897665.0,None-any-None,pyhd8ed1ab_0,2022-02-05 13:01:12.127000+00:00,86ed2ee522fe2e68fb8c858251513894,None,11527.0,conda-forge/napari-plot-profile/0.2.1/noarch/napari-plot-profile-0.2.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-plot-profile/0.2.1/noarch/napari-plot-profile-0.2.1-pyhd8ed1ab_0.tar.bz2,conda,0.2.1,conda-forge,['main'],public,,0.2.1,napari-plot-profile.PlotProfile,PlotProfile,napari_plot_profile._dock_widget:PlotProfile,,,,2.1,napari-plot-profile,0.2.2,,Plot intensity along a line and create topographical views in napari,"# napari-plot-profile (npp) +",text/markdown,https://github.com/lukasz-migas/napari-1d,Lukasz G. Migas,lukas.migas@yahoo.com,BSD-3,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'qtpy', 'qtawesome', 'napari (<0.4.15,>=0.4.13)', 'matplotlib', 'vispy (>=0.9.6)', ""PySide2 (!=5.15.0,>=5.13.2) ; extra == 'all'"", ""pre-commit (>=2.9.0) ; extra == 'dev'"", ""black (==22.1.0) ; extra == 'dev'"", ""flake8 (==4.0.1) ; extra == 'dev'"", ""PySide2 (!=5.15.0,>=5.13.2) ; extra == 'dev'"", ""pytest ; extra == 'dev'"", ""pytest-qt ; extra == 'dev'"", ""scikit-image ; extra == 'dev'"", ""PyQt5 (!=5.15.0,>=5.12.3) ; extra == 'pyqt'"", ""PyQt5 (!=5.15.0,>=5.12.3) ; extra == 'pyqt5'"", ""PySide2 (!=5.15.0,>=5.13.2) ; extra == 'pyside'"", ""PySide2 (!=5.15.0,>=5.13.2) ; extra == 'pyside2'"", ""PyQt5 (!=5.15.0,>=5.12.3) ; extra == 'qt'"", ""pytest ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""scikit-image ; extra == 'testing'""]",>=3.7,"['Bug Tracker, https://github.com/lukasz-migas/napari-1d/issues', 'Documentation, https://github.com/lukasz-migas/napari-1d#README.md', 'Source Code, https://github.com/lukasz-migas/napari-1d', 'User Support, https://github.com/lukasz-migas/napari-1d/issues']","['all', 'dev', 'pyqt', 'pyqt5', 'pyside', 'pyside2', 'qt', 'testing']",True,0.1.4,conda-forge/napari-plot/0.1.4,0.1.4.5,conda-forge/napari-plot/0.1.4.5,0.1.5,conda-forge/napari-plot/0.1.5,conda,noarch/napari-plot-0.1.4-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari 0.4.14', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'qtawesome', 'qtpy']",pyhd8ed1ab_0,1644247258138.0,None-any-None,noarch,2022-02-07 15:23:26.252000+00:00,cb577e438db6c19f9c6265ec4cd29a16,None,96137.0,conda-forge/napari-plot/0.1.4/noarch/napari-plot-0.1.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-plot/0.1.4/noarch/napari-plot-0.1.4-pyhd8ed1ab_0.tar.bz2,conda,0.1.4,conda-forge,['main'],conda,noarch/napari-plot-0.1.4.5-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari 0.4.14', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'qtawesome', 'qtpy']",noarch,1647503661913.0,None-any-None,pyhd8ed1ab_0,2022-03-17 07:56:25.099000+00:00,9ad7461a0087984d4fcb1d6db75326e0,None,103658.0,conda-forge/napari-plot/0.1.4.5/noarch/napari-plot-0.1.4.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-plot/0.1.4.5/noarch/napari-plot-0.1.4.5-pyhd8ed1ab_0.tar.bz2,conda,0.1.4.5,conda-forge,['main'],conda,noarch/napari-plot-0.1.5-pyhd8ed1ab_0.tar.bz2,None-any-None,True,noarch,pyhd8ed1ab_0,0.0,"['napari 0.4.14', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'qtawesome', 'qtpy']",BSD-3-Clause,python,1647985768352.0,2022-03-22 21:51:35.207000+00:00,499f6324069f25b7b46eddc1fa17fabf,None,107324.0,conda-forge/napari-plot/0.1.5/noarch/napari-plot-0.1.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-plot/0.1.5/noarch/napari-plot-0.1.5-pyhd8ed1ab_0.tar.bz2,conda,0.1.5,conda-forge,['main'],,,,,,,,,,,napari-plot.NapariPlotWidget,NapariPlotWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +293,napari-plot-profile,0.2.2,napari-plot-profile,Plot intensity along a line and create topographical views in napari,"Robert Haase, Marcelo Leomil Zoccoler",BSD-3-Clause,https://github.com/haesleinhuepf/napari-plot-profile,61fe751a39552dcb59597d81,['conda'],,https://github.com/haesleinhuepf/napari-plot-profile,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-plot-profile,http://api.anaconda.org/packages/conda-forge/napari-plot-profile,http://anaconda.org/conda-forge/napari-plot-profile,"['0.2.1', '0.2.2']",0.2.2,0.2.2,['noarch'],4.0,,['pyhd8ed1ab_0'],0.2.1,conda-forge/napari-plot-profile/0.2.1,1.0,0.0,2022-02-05 13:01:11.503000+00:00,2023-06-18 08:40:47.573000+00:00,conda,noarch/napari-plot-profile-0.2.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.4', 'napari-tools-menu', 'numpy', 'pyqtgraph', 'python >=3.7']",noarch,1644065897665.0,None-any-None,pyhd8ed1ab_0,2022-02-05 13:01:12.127000+00:00,86ed2ee522fe2e68fb8c858251513894,None,11527.0,conda-forge/napari-plot-profile/0.2.1/noarch/napari-plot-profile-0.2.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-plot-profile/0.2.1/noarch/napari-plot-profile-0.2.1-pyhd8ed1ab_0.tar.bz2,conda,0.2.1,conda-forge,['main'],public,,0.2.1,napari-plot-profile.PlotProfile,PlotProfile,napari_plot_profile._dock_widget:PlotProfile,,,,2.1,napari-plot-profile,0.2.2,,Plot intensity along a line and create topographical views in napari,"# napari-plot-profile (npp) [![License](https://img.shields.io/pypi/l/napari-plot-profile.svg?color=green)](https://github.com/haesleinhuepf/napari-plot-profile/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-plot-profile.svg?color=green)](https://pypi.org/project/napari-plot-profile) @@ -29604,8 +30835,8 @@ If you encounter any problems, please create a thread on [image.sc] along with a [PyPI]: https://pypi.org/ [image.sc]: https://image.sc [@haesleinhuepf]: https://twitter.com/haesleinhuepf -",text/markdown,https://github.com/haesleinhuepf/napari-plot-profile,"Robert Haase, Marcelo Leomil Zoccoler",robert.haase@tu-dresden.de,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'pyqtgraph', 'napari', 'napari-tools-menu', 'napari-skimage-regionprops (>=0.2.4)', 'imageio (!=2.22.1)']",>=3.7,"['Bug Tracker, https://github.com/haesleinhuepf/napari-plot-profile/issues', 'Documentation, https://github.com/haesleinhuepf/napari-plot-profile#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-plot-profile', 'User Support, https://github.com/haesleinhuepf/napari-plot-profile/issues']",,True,0.2.2,conda-forge/napari-plot-profile/0.2.2,,,,,conda,noarch/napari-plot-profile-0.2.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.4', 'napari-tools-menu', 'numpy', 'pyqtgraph', 'python >=3.7']",pyhd8ed1ab_0,1664997381183.0,None-any-None,noarch,2022-10-05 19:18:30.908000+00:00,8456533de99bc8c91a6b6deb64db5b4f,None,14749.0,conda-forge/napari-plot-profile/0.2.2/noarch/napari-plot-profile-0.2.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-plot-profile/0.2.2/noarch/napari-plot-profile-0.2.2-pyhd8ed1ab_0.tar.bz2,conda,0.2.2,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-plot-profile.topographical_view,topographical_view,napari_plot_profile._dock_widget:topographical_view,,,,,,,napari-plot-profile.PlotProfile,PlotProfile,False,napari-plot-profile.topographical_view,topographical_view,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -282,napari-plugin-search,0.1.4,napari-plugin-search,Find napari plugins,Robert Haase,BSD-3-Clause,https://github.com/haesleinhuepf/napari-plugin-search,61fd26d527bdd9a91cf1e87a,['conda'],,https://github.com/haesleinhuepf/napari-plugin-search,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-plugin-search,http://api.anaconda.org/packages/conda-forge/napari-plugin-search,http://anaconda.org/conda-forge/napari-plugin-search,['0.1.3'],0.1.3,0.1.3,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.3,conda-forge/napari-plugin-search/0.1.3,1.0,0.0,2022-02-04 13:14:54.098000+00:00,2023-06-18 08:40:46.739000+00:00,conda,noarch/napari-plugin-search-0.1.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'python >=3.7']",noarch,1643980326073.0,None-any-None,pyhd8ed1ab_0,2022-02-04 13:14:54.356000+00:00,468c9f3d86b2fa1a2376e6a870702294,None,9522.0,conda-forge/napari-plugin-search/0.1.3/noarch/napari-plugin-search-0.1.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-plugin-search/0.1.3/noarch/napari-plugin-search-0.1.3-pyhd8ed1ab_0.tar.bz2,conda,0.1.3,conda-forge,['main'],public,,0.2.1,napari-plugin-search.PluginSearch,PluginSearch,napari_plugin_search._dock_widget:PluginSearch,,,,2.1,napari-plugin-search,0.1.4,,Find napari plugins,"# napari-plugin-search +",text/markdown,https://github.com/haesleinhuepf/napari-plot-profile,"Robert Haase, Marcelo Leomil Zoccoler",robert.haase@tu-dresden.de,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'pyqtgraph', 'napari', 'napari-tools-menu', 'napari-skimage-regionprops (>=0.2.4)', 'imageio (!=2.22.1)']",>=3.7,"['Bug Tracker, https://github.com/haesleinhuepf/napari-plot-profile/issues', 'Documentation, https://github.com/haesleinhuepf/napari-plot-profile#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-plot-profile', 'User Support, https://github.com/haesleinhuepf/napari-plot-profile/issues']",,True,0.2.2,conda-forge/napari-plot-profile/0.2.2,,,,,conda,noarch/napari-plot-profile-0.2.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.4', 'napari-tools-menu', 'numpy', 'pyqtgraph', 'python >=3.7']",pyhd8ed1ab_0,1664997381183.0,None-any-None,noarch,2022-10-05 19:18:30.908000+00:00,8456533de99bc8c91a6b6deb64db5b4f,None,14749.0,conda-forge/napari-plot-profile/0.2.2/noarch/napari-plot-profile-0.2.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-plot-profile/0.2.2/noarch/napari-plot-profile-0.2.2-pyhd8ed1ab_0.tar.bz2,conda,0.2.2,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-plot-profile.topographical_view,topographical_view,napari_plot_profile._dock_widget:topographical_view,,,,,,,napari-plot-profile.PlotProfile,PlotProfile,False,napari-plot-profile.topographical_view,topographical_view,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +294,napari-plugin-search,0.1.4,napari-plugin-search,Find napari plugins,Robert Haase,BSD-3-Clause,https://github.com/haesleinhuepf/napari-plugin-search,61fd26d527bdd9a91cf1e87a,['conda'],,https://github.com/haesleinhuepf/napari-plugin-search,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-plugin-search,http://api.anaconda.org/packages/conda-forge/napari-plugin-search,http://anaconda.org/conda-forge/napari-plugin-search,['0.1.3'],0.1.3,0.1.3,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.3,conda-forge/napari-plugin-search/0.1.3,1.0,0.0,2022-02-04 13:14:54.098000+00:00,2023-06-18 08:40:46.739000+00:00,conda,noarch/napari-plugin-search-0.1.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'python >=3.7']",noarch,1643980326073.0,None-any-None,pyhd8ed1ab_0,2022-02-04 13:14:54.356000+00:00,468c9f3d86b2fa1a2376e6a870702294,None,9522.0,conda-forge/napari-plugin-search/0.1.3/noarch/napari-plugin-search-0.1.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-plugin-search/0.1.3/noarch/napari-plugin-search-0.1.3-pyhd8ed1ab_0.tar.bz2,conda,0.1.3,conda-forge,['main'],public,,0.2.1,napari-plugin-search.PluginSearch,PluginSearch,napari_plugin_search._dock_widget:PluginSearch,,,,2.1,napari-plugin-search,0.1.4,,Find napari plugins,"# napari-plugin-search [![License](https://img.shields.io/pypi/l/napari-plugin-search.svg?color=green)](https://github.com/haesleinhuepf/napari-plugin-search/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-plugin-search.svg?color=green)](https://pypi.org/project/napari-plugin-search) @@ -29663,8 +30894,8 @@ If you encounter any problems, please create a thread on [image.sc] along with a [PyPI]: https://pypi.org/ [image.sc]: https://image.sc [@haesleinhuepf]: https://twitter.com/haesleinhuepf -",text/markdown,https://github.com/haesleinhuepf/napari-plugin-search,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari-tools-menu']",>=3.7,"['Bug Tracker, https://github.com/haesleinhuepf/napari-plugin-search/issues', 'Documentation, https://github.com/haesleinhuepf/napari-plugin-search#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-plugin-search', 'User Support, https://github.com/haesleinhuepf/napari-plugin-search/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-plugin-search.PluginSearch,PluginSearch,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -283,napari-points2regions,0.0.2,Points2Regions,A napari plugin for Points2Regions,Jonas Windhager,MIT,https://github.com/wahlby-lab/napari-points2regions,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-points2regions.load_points,Load points,napari_points2regions:load_points,,,,2.1,napari-points2regions,0.0.2,,A napari plugin for Points2Regions,"# napari-points2regions +",text/markdown,https://github.com/haesleinhuepf/napari-plugin-search,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari-tools-menu']",>=3.7,"['Bug Tracker, https://github.com/haesleinhuepf/napari-plugin-search/issues', 'Documentation, https://github.com/haesleinhuepf/napari-plugin-search#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-plugin-search', 'User Support, https://github.com/haesleinhuepf/napari-plugin-search/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-plugin-search.PluginSearch,PluginSearch,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +295,napari-points2regions,0.0.2,Points2Regions,A napari plugin for Points2Regions,Jonas Windhager,MIT,https://github.com/wahlby-lab/napari-points2regions,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-points2regions.load_points,Load points,napari_points2regions:load_points,,,,2.1,napari-points2regions,0.0.2,,A napari plugin for Points2Regions,"# napari-points2regions [![License MIT](https://img.shields.io/pypi/l/napari-points2regions.svg?color=green)](https://github.com/wahlby-lab/napari-points2regions/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-points2regions.svg?color=green)](https://pypi.org/project/napari-points2regions) @@ -29730,8 +30961,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/wahlby-lab/napari-points2regions,Jonas Windhager,jonas@windhager.io,MIT,"['Framework :: napari', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']","['colorcet', 'magicgui', 'napari', 'numpy', 'pandas', 'points2regions >=0.0.4', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.9,"['Bug Tracker, https://github.com/wahlby-lab/napari-points2regions/issues', 'Documentation, https://github.com/wahlby-lab/napari-points2regions#README.md', 'Source Code, https://github.com/wahlby-lab/napari-points2regions', 'User Support, https://github.com/wahlby-lab/napari-points2regions/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation']",napari-points2regions.points2regions,Points2Regions,napari_points2regions:points2regions,napari-points2regions.adjust_point_display,Adjust point display,napari_points2regions:adjust_point_display,napari-points2regions.export_point_features,Export point features,napari_points2regions:export_point_features,napari-points2regions.load_points,Load points,False,napari-points2regions.points2regions,Points2Regions,False,napari-points2regions.adjust_point_display,Adjust point display,False,napari-points2regions.export_point_features,Export point features,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -284,napari-pointslayer-projection,0.0.2,Projection of Points layers,This plugin creates a 2d projection of all your points.,Niklas Netter,BSD-3-Clause,https://github.com/gatoniel/napari-pointslayer-projection,6436efdbda6c28bc11079d68,['conda'],,https://github.com/gatoniel/napari-pointslayer-projection,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-pointslayer-projection,http://api.anaconda.org/packages/conda-forge/napari-pointslayer-projection,http://anaconda.org/conda-forge/napari-pointslayer-projection,['0.0.2'],0.0.2,0.0.2,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.2,conda-forge/napari-pointslayer-projection/0.0.2,1.0,0.0,2023-04-12 17:52:25.753000+00:00,2023-06-18 17:28:00.127000+00:00,conda,noarch/napari-pointslayer-projection-0.0.2-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8,<3.11', 'qtpy']",noarch,1681321831119.0,None-any-None,pyhd8ed1ab_0,2023-04-12 17:52:26.016000+00:00,bc56b006bda9e8b5728774ef0b3673eb,f9c8e64c9457a262e4cfd7a553708dd69ed6b94290bffb73a1b12ebd58562b8a,11388.0,conda-forge/napari-pointslayer-projection/0.0.2/noarch/napari-pointslayer-projection-0.0.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-pointslayer-projection/0.0.2/noarch/napari-pointslayer-projection-0.0.2-pyhd8ed1ab_0.conda,conda,0.0.2,conda-forge,['main'],public,,0.2.1,napari-pointslayer-projection.make_func_widget,Project points into 2d,napari_pointslayer_projection._widget:project_points,,,,2.1,napari-pointslayer-projection,0.0.2,,This plugin creates a 2d projection of all your points.,"# napari-pointslayer-projection +",text/markdown,https://github.com/wahlby-lab/napari-points2regions,Jonas Windhager,jonas@windhager.io,MIT,"['Framework :: napari', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']","['colorcet', 'magicgui', 'napari', 'numpy', 'pandas', 'points2regions >=0.0.4', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.9,"['Bug Tracker, https://github.com/wahlby-lab/napari-points2regions/issues', 'Documentation, https://github.com/wahlby-lab/napari-points2regions#README.md', 'Source Code, https://github.com/wahlby-lab/napari-points2regions', 'User Support, https://github.com/wahlby-lab/napari-points2regions/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation']",napari-points2regions.points2regions,Points2Regions,napari_points2regions:points2regions,napari-points2regions.adjust_point_display,Adjust point display,napari_points2regions:adjust_point_display,napari-points2regions.export_point_features,Export point features,napari_points2regions:export_point_features,napari-points2regions.load_points,Load points,False,napari-points2regions.points2regions,Points2Regions,False,napari-points2regions.adjust_point_display,Adjust point display,False,napari-points2regions.export_point_features,Export point features,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +296,napari-pointslayer-projection,0.0.2,Projection of Points layers,This plugin creates a 2d projection of all your points.,Niklas Netter,BSD-3-Clause,https://github.com/gatoniel/napari-pointslayer-projection,6436efdbda6c28bc11079d68,['conda'],,https://github.com/gatoniel/napari-pointslayer-projection,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-pointslayer-projection,http://api.anaconda.org/packages/conda-forge/napari-pointslayer-projection,http://anaconda.org/conda-forge/napari-pointslayer-projection,['0.0.2'],0.0.2,0.0.2,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.2,conda-forge/napari-pointslayer-projection/0.0.2,1.0,0.0,2023-04-12 17:52:25.753000+00:00,2023-06-18 17:28:00.127000+00:00,conda,noarch/napari-pointslayer-projection-0.0.2-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8,<3.11', 'qtpy']",noarch,1681321831119.0,None-any-None,pyhd8ed1ab_0,2023-04-12 17:52:26.016000+00:00,bc56b006bda9e8b5728774ef0b3673eb,f9c8e64c9457a262e4cfd7a553708dd69ed6b94290bffb73a1b12ebd58562b8a,11388.0,conda-forge/napari-pointslayer-projection/0.0.2/noarch/napari-pointslayer-projection-0.0.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-pointslayer-projection/0.0.2/noarch/napari-pointslayer-projection-0.0.2-pyhd8ed1ab_0.conda,conda,0.0.2,conda-forge,['main'],public,,0.2.1,napari-pointslayer-projection.make_func_widget,Project points into 2d,napari_pointslayer_projection._widget:project_points,,,,2.1,napari-pointslayer-projection,0.0.2,,This plugin creates a 2d projection of all your points.,"# napari-pointslayer-projection [![License BSD-3](https://img.shields.io/pypi/l/napari-pointslayer-projection.svg?color=green)](https://github.com/gatoniel/napari-pointslayer-projection/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-pointslayer-projection.svg?color=green)](https://pypi.org/project/napari-pointslayer-projection) @@ -29798,8 +31029,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/gatoniel/napari-pointslayer-projection,Niklas Netter,niknett@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/gatoniel/napari-pointslayer-projection/issues', 'Documentation, https://github.com/gatoniel/napari-pointslayer-projection#README.md', 'Source Code, https://github.com/gatoniel/napari-pointslayer-projection', 'User Support, https://github.com/gatoniel/napari-pointslayer-projection/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-pointslayer-projection.make_func_widget,Project points into 2d,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -285,napari-potential-field-navigation,0.1.1,Differentiable Potential Field Navigation,A simple plugin for trajectories visualisations in napari for lung navigation in CTs scans,Robin CREMESE,MPL-2.0,https://github.com/rcremese/napari-potential-field-navigation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-potential-field-navigation.open_samples,Open image and label samples for the Diff APF plugin,napari_potential_field_navigation._sample_data:open_samples,napari-potential-field-navigation.get_reader,['*.npy'],False,2.1,napari-potential-field-navigation,0.1.1,,A simple plugin for trajectories visualisations in napari for lung navigation in CTs scans,"# napari-potential-field-navigation +",text/markdown,https://github.com/gatoniel/napari-pointslayer-projection,Niklas Netter,niknett@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/gatoniel/napari-pointslayer-projection/issues', 'Documentation, https://github.com/gatoniel/napari-pointslayer-projection#README.md', 'Source Code, https://github.com/gatoniel/napari-pointslayer-projection', 'User Support, https://github.com/gatoniel/napari-pointslayer-projection/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-pointslayer-projection.make_func_widget,Project points into 2d,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +297,napari-potential-field-navigation,0.1.1,Differentiable Potential Field Navigation,A simple plugin for trajectories visualisations in napari for lung navigation in CTs scans,Robin CREMESE,MPL-2.0,https://github.com/rcremese/napari-potential-field-navigation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-potential-field-navigation.open_samples,Open image and label samples for the Diff APF plugin,napari_potential_field_navigation._sample_data:open_samples,napari-potential-field-navigation.get_reader,['*.npy'],False,2.1,napari-potential-field-navigation,0.1.1,,A simple plugin for trajectories visualisations in napari for lung navigation in CTs scans,"# napari-potential-field-navigation [![License Mozilla Public License 2.0](https://img.shields.io/pypi/l/napari-potential-field-navigation.svg?color=green)](https://github.com/rcremese/napari-potential-field-navigation/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-potential-field-navigation.svg?color=green)](https://pypi.org/project/napari-potential-field-navigation) @@ -29866,8 +31097,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/rcremese/napari-potential-field-navigation,Robin CREMESE,robin.cremese@gmail.com,MPL-2.0,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Mozilla Public License 2.0 (MPL 2.0)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['napari', 'numpy', 'magicgui', 'qtpy', 'scikit-image', 'napari-itk-io', 'taichi', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/rcremese/napari-potential-field-navigation/issues', 'Documentation, https://github.com/rcremese/napari-potential-field-navigation#README.md', 'Source Code, https://github.com/rcremese/napari-potential-field-navigation', 'User Support, https://github.com/rcremese/napari-potential-field-navigation/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",napari-potential-field-navigation.get_reader,Open data with Differentiable Potential Field Navigation,napari_potential_field_navigation._reader:napari_get_reader,napari-potential-field-navigation.write_multiple,Save multi-layer data with Differentiable Potential Field Navigation,napari_potential_field_navigation._writer:write_multiple,napari-potential-field-navigation.write_single_image,Save image data with Differentiable Potential Field Navigation,napari_potential_field_navigation._writer:write_single_image,napari-potential-field-navigation.make_diff_apf_widget,Diff APF,False,,,,,,,,,,napari-potential-field-navigation.make_sample_data,Load sample data from Differentiable Potential Field Navigation,napari_potential_field_navigation._sample_data:make_sample_data,napari-potential-field-navigation.write_multiple,"['image*', 'labels*']",,napari-potential-field-navigation.write_single_image,['image'],['.npy'],,napari-potential-field-navigation.make_sample_data,unique_id.1,Differentiable Potential Field Navigation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-potential-field-navigation.open_samples,unique_id.2,Image / Label Samples,napari-potential-field-navigation.make_diff_apf_widget,Navigate in medical images using differentiable potential fields,napari_potential_field_navigation:DiffApfWidget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -286,napari-power-spectrum,0.0.6,Power Spectrum,A simple plugin to get the power spectrum of frames of a stack image,Giorgia Tortora,BSD-3-Clause,https://github.com/GiorgiaTortora/napari-power-spectrum,62ab5e33e8e8f33544559de1,['conda'],,https://github.com/GiorgiaTortora/napari-power-spectrum,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-power-spectrum,http://api.anaconda.org/packages/conda-forge/napari-power-spectrum,http://anaconda.org/conda-forge/napari-power-spectrum,['0.0.6'],0.0.6,0.0.6,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.6,conda-forge/napari-power-spectrum/0.0.6,1.0,0.0,2022-06-16 16:45:36.809000+00:00,2023-06-18 08:41:49.034000+00:00,conda,noarch/napari-power-spectrum-0.0.6-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy']",noarch,1655397764157.0,None-any-None,pyhd8ed1ab_0,2022-06-16 16:45:37.217000+00:00,38a051217f63a0b7d4eba5ecd2a55aee,None,9196.0,conda-forge/napari-power-spectrum/0.0.6/noarch/napari-power-spectrum-0.0.6-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-power-spectrum/0.0.6/noarch/napari-power-spectrum-0.0.6-pyhd8ed1ab_0.tar.bz2,conda,0.0.6,conda-forge,['main'],public,,0.2.1,napari-power-spectrum.make_powerspectrum_widget,Make a widget for the power spectrum,napari_power_spectrum._widget:calculate_spectrum,,,,2.1,napari-power-spectrum,0.0.6,['UNKNOWN'],A simple plugin to get the power spectrum of frames of a stack image,"# napari-power-spectrum +",text/markdown,https://github.com/rcremese/napari-potential-field-navigation,Robin CREMESE,robin.cremese@gmail.com,MPL-2.0,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Mozilla Public License 2.0 (MPL 2.0)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['napari', 'numpy', 'magicgui', 'qtpy', 'scikit-image', 'napari-itk-io', 'taichi', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/rcremese/napari-potential-field-navigation/issues', 'Documentation, https://github.com/rcremese/napari-potential-field-navigation#README.md', 'Source Code, https://github.com/rcremese/napari-potential-field-navigation', 'User Support, https://github.com/rcremese/napari-potential-field-navigation/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",napari-potential-field-navigation.get_reader,Open data with Differentiable Potential Field Navigation,napari_potential_field_navigation._reader:napari_get_reader,napari-potential-field-navigation.write_multiple,Save multi-layer data with Differentiable Potential Field Navigation,napari_potential_field_navigation._writer:write_multiple,napari-potential-field-navigation.write_single_image,Save image data with Differentiable Potential Field Navigation,napari_potential_field_navigation._writer:write_single_image,napari-potential-field-navigation.make_diff_apf_widget,Diff APF,False,,,,,,,,,,napari-potential-field-navigation.make_sample_data,Load sample data from Differentiable Potential Field Navigation,napari_potential_field_navigation._sample_data:make_sample_data,napari-potential-field-navigation.write_multiple,"['image*', 'labels*']",,napari-potential-field-navigation.write_single_image,['image'],['.npy'],,napari-potential-field-navigation.make_sample_data,unique_id.1,Differentiable Potential Field Navigation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-potential-field-navigation.open_samples,unique_id.2,Image / Label Samples,napari-potential-field-navigation.make_diff_apf_widget,Navigate in medical images using differentiable potential fields,napari_potential_field_navigation:DiffApfWidget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +298,napari-power-spectrum,0.0.6,Power Spectrum,A simple plugin to get the power spectrum of frames of a stack image,Giorgia Tortora,BSD-3-Clause,https://github.com/GiorgiaTortora/napari-power-spectrum,62ab5e33e8e8f33544559de1,['conda'],,https://github.com/GiorgiaTortora/napari-power-spectrum,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-power-spectrum,http://api.anaconda.org/packages/conda-forge/napari-power-spectrum,http://anaconda.org/conda-forge/napari-power-spectrum,['0.0.6'],0.0.6,0.0.6,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.6,conda-forge/napari-power-spectrum/0.0.6,1.0,0.0,2022-06-16 16:45:36.809000+00:00,2023-06-18 08:41:49.034000+00:00,conda,noarch/napari-power-spectrum-0.0.6-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy']",noarch,1655397764157.0,None-any-None,pyhd8ed1ab_0,2022-06-16 16:45:37.217000+00:00,38a051217f63a0b7d4eba5ecd2a55aee,None,9196.0,conda-forge/napari-power-spectrum/0.0.6/noarch/napari-power-spectrum-0.0.6-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-power-spectrum/0.0.6/noarch/napari-power-spectrum-0.0.6-pyhd8ed1ab_0.tar.bz2,conda,0.0.6,conda-forge,['main'],public,,0.2.1,napari-power-spectrum.make_powerspectrum_widget,Make a widget for the power spectrum,napari_power_spectrum._widget:calculate_spectrum,,,,2.1,napari-power-spectrum,0.0.6,['UNKNOWN'],A simple plugin to get the power spectrum of frames of a stack image,"# napari-power-spectrum [![License](https://img.shields.io/pypi/l/napari-power-spectrum.svg?color=green)](https://github.com/GiorgiaTortora/napari-power-spectrum/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-power-spectrum.svg?color=green)](https://pypi.org/project/napari-power-spectrum) @@ -29936,8 +31167,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/GiorgiaTortora/napari-power-spectrum,Giorgia Tortora,giorgiatortora2@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/GiorgiaTortora/napari-power-spectrum/issues', 'Documentation, https://github.com/GiorgiaTortora/napari-power-spectrum#README.md', 'Source Code, https://github.com/GiorgiaTortora/napari-power-spectrum', 'User Support, https://github.com/GiorgiaTortora/napari-power-spectrum/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-power-spectrum.make_powerspectrum_widget,Power Spectrum Widget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -287,napari-power-widgets,0.0.1,napari-power-widgets,Powerful widgets and type annotations for napari plugin widgets,Hanjin Liu,BSD-3-Clause,https://github.com/hanjinliu/napari-power-widgets,63838ab5358aafdd3d72aeaf,['conda'],,https://github.com/hanjinliu/napari-power-widgets,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-power-widgets,http://api.anaconda.org/packages/conda-forge/napari-power-widgets,http://anaconda.org/conda-forge/napari-power-widgets,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-power-widgets/0.0.1,1.0,0.0,2022-11-27 16:05:06.474000+00:00,2023-06-18 08:43:07.425000+00:00,conda,noarch/napari-power-widgets-0.0.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'pandas', 'python >=3.8', 'typing-extensions']",noarch,1669564975965.0,None-any-None,pyhd8ed1ab_0,2022-11-27 16:05:06.874000+00:00,7c7ddf32e3c09131cd037395f00dbe3b,eefa446a76e8795f74e3dc2054110441d57b5155df3fa7dd6ac28bf52d125be8,20373.0,conda-forge/napari-power-widgets/0.0.1/noarch/napari-power-widgets-0.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-power-widgets/0.0.1/noarch/napari-power-widgets-0.0.1-pyhd8ed1ab_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,,,,,,,2.1,napari-power-widgets,0.0.1,,Powerful widgets and type annotations for napari plugin widgets,"# napari-power-widgets +",text/markdown,https://github.com/GiorgiaTortora/napari-power-spectrum,Giorgia Tortora,giorgiatortora2@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/GiorgiaTortora/napari-power-spectrum/issues', 'Documentation, https://github.com/GiorgiaTortora/napari-power-spectrum#README.md', 'Source Code, https://github.com/GiorgiaTortora/napari-power-spectrum', 'User Support, https://github.com/GiorgiaTortora/napari-power-spectrum/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-power-spectrum.make_powerspectrum_widget,Power Spectrum Widget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +299,napari-power-widgets,0.0.1,napari-power-widgets,Powerful widgets and type annotations for napari plugin widgets,Hanjin Liu,BSD-3-Clause,https://github.com/hanjinliu/napari-power-widgets,63838ab5358aafdd3d72aeaf,['conda'],,https://github.com/hanjinliu/napari-power-widgets,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-power-widgets,http://api.anaconda.org/packages/conda-forge/napari-power-widgets,http://anaconda.org/conda-forge/napari-power-widgets,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-power-widgets/0.0.1,1.0,0.0,2022-11-27 16:05:06.474000+00:00,2023-06-18 08:43:07.425000+00:00,conda,noarch/napari-power-widgets-0.0.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'pandas', 'python >=3.8', 'typing-extensions']",noarch,1669564975965.0,None-any-None,pyhd8ed1ab_0,2022-11-27 16:05:06.874000+00:00,7c7ddf32e3c09131cd037395f00dbe3b,eefa446a76e8795f74e3dc2054110441d57b5155df3fa7dd6ac28bf52d125be8,20373.0,conda-forge/napari-power-widgets/0.0.1/noarch/napari-power-widgets-0.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-power-widgets/0.0.1/noarch/napari-power-widgets-0.0.1-pyhd8ed1ab_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,,,,,,,2.1,napari-power-widgets,0.0.1,,Powerful widgets and type annotations for napari plugin widgets,"# napari-power-widgets [![License BSD-3](https://img.shields.io/pypi/l/napari-power-widgets.svg?color=green)](https://github.com/hanjinliu/napari-power-widgets/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-power-widgets.svg?color=green)](https://pypi.org/project/napari-power-widgets) @@ -30088,8 +31319,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/hanjinliu/napari-power-widgets,Hanjin Liu,liuhanjin-sc@g.ecc.u-tokyo.ac.jp,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'pandas', 'typing-extensions', 'magicgui', 'napari', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/hanjinliu/napari-power-widgets/issues', 'Documentation, https://github.com/hanjinliu/napari-power-widgets#README.md', 'Source Code, https://github.com/hanjinliu/napari-power-widgets', 'User Support, https://github.com/hanjinliu/napari-power-widgets/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -288,napari-pram,0.1.3,napari PRAM,plugin for PRAM data annotation and processing,Hieu Hoang,MIT,,62c53802a9b86c6f9b789a07,['conda'],,https://pypi.org/project/napari-pram/,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-pram,http://api.anaconda.org/packages/conda-forge/napari-pram,http://anaconda.org/conda-forge/napari-pram,['0.1.3'],0.1.3,0.1.3,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.3,conda-forge/napari-pram/0.1.3,1.0,0.0,2022-07-06 07:21:35.586000+00:00,2023-06-18 08:42:01.991000+00:00,conda,noarch/napari-pram-0.1.3-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['magicgui', 'napari', 'numpy', 'opencv', 'python >=3.7', 'qtpy', 'scikit-image', 'scipy']",noarch,1657091924521.0,None-any-None,pyhd8ed1ab_0,2022-07-06 07:21:36.229000+00:00,4907fa340adf8a2c563eb5c8ef4ae0d0,None,16167.0,conda-forge/napari-pram/0.1.3/noarch/napari-pram-0.1.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-pram/0.1.3/noarch/napari-pram-0.1.3-pyhd8ed1ab_0.tar.bz2,conda,0.1.3,conda-forge,['main'],public,,0.2.1,napari-pram.get_img_reader,Open PRAM image with napari PRAM,napari_pram._reader:reader_pram_image,napari-pram.get_img_reader,['*.png'],False,2.1,napari-pram,0.1.3,['UNKNOWN'],plugin for PRAM data annotation and processing,"# napari-pram +",text/markdown,https://github.com/hanjinliu/napari-power-widgets,Hanjin Liu,liuhanjin-sc@g.ecc.u-tokyo.ac.jp,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'pandas', 'typing-extensions', 'magicgui', 'napari', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/hanjinliu/napari-power-widgets/issues', 'Documentation, https://github.com/hanjinliu/napari-power-widgets#README.md', 'Source Code, https://github.com/hanjinliu/napari-power-widgets', 'User Support, https://github.com/hanjinliu/napari-power-widgets/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +300,napari-pram,0.1.3,napari PRAM,plugin for PRAM data annotation and processing,Hieu Hoang,MIT,,62c53802a9b86c6f9b789a07,['conda'],,https://pypi.org/project/napari-pram/,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-pram,http://api.anaconda.org/packages/conda-forge/napari-pram,http://anaconda.org/conda-forge/napari-pram,['0.1.3'],0.1.3,0.1.3,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.3,conda-forge/napari-pram/0.1.3,1.0,0.0,2022-07-06 07:21:35.586000+00:00,2023-06-18 08:42:01.991000+00:00,conda,noarch/napari-pram-0.1.3-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['magicgui', 'napari', 'numpy', 'opencv', 'python >=3.7', 'qtpy', 'scikit-image', 'scipy']",noarch,1657091924521.0,None-any-None,pyhd8ed1ab_0,2022-07-06 07:21:36.229000+00:00,4907fa340adf8a2c563eb5c8ef4ae0d0,None,16167.0,conda-forge/napari-pram/0.1.3/noarch/napari-pram-0.1.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-pram/0.1.3/noarch/napari-pram-0.1.3-pyhd8ed1ab_0.tar.bz2,conda,0.1.3,conda-forge,['main'],public,,0.2.1,napari-pram.get_img_reader,Open PRAM image with napari PRAM,napari_pram._reader:reader_pram_image,napari-pram.get_img_reader,['*.png'],False,2.1,napari-pram,0.1.3,['UNKNOWN'],plugin for PRAM data annotation and processing,"# napari-pram [![License](https://img.shields.io/pypi/l/napari-pram.svg?color=green)](https://github.com/hthieu166/napari-pram/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-pram.svg?color=green)](https://pypi.org/project/napari-pram) @@ -30199,8 +31430,117 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,,Hieu Hoang,hthieu@illinois.edu,MIT,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['numpy', 'magicgui', 'qtpy', 'opencv-python', 'scipy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.7,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-pram.get_vgg_annot_reader,Open VGG annotation with napari PRAM,napari_pram._reader:reader_vgg_annot,napari-pram.write_multiple,Save multi-layer data with napari PRAM,napari_pram._writer:write_multiple,napari-pram.write_single_image,Save image data with napari PRAM,napari_pram._writer:write_single_image,napari-pram.open_panel,Open PRAM's toolbox,False,,,,,,,,,,napari-pram.make_sample_data,Load sample data from napari PRAM,napari_pram._sample_data:make_sample_data,napari-pram.write_multiple,"['image*', 'labels*']",,napari-pram.write_single_image,['image'],['.npy'],,napari-pram.make_sample_data,unique_id.1,napari PRAM,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-pram.make_qwidget,Make example QWidget,napari_pram._widget:ExampleQWidget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-pram.open_panel,Show PRAM toolbox,napari_pram.main_napari:PramQWidget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -289,napari-process-points-and-surfaces,0.5.0,napari-process-points-and-surfaces,Process and analyze surfaces using open3d and vedo in napari,"Robert Haase, Johannes Soltwedel",BSD-3-Clause,https://github.com/haesleinhuepf/napari-process-points-and-surfaces,6438625cb6840a3f6c791f9d,['conda'],,https://github.com/haesleinhuepf/napari-process-points-and-surfaces,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-process-points-and-surfaces,http://api.anaconda.org/packages/conda-forge/napari-process-points-and-surfaces,http://anaconda.org/conda-forge/napari-process-points-and-surfaces,"['0.4.0', '0.5.0']",0.5.0,0.5.0,['noarch'],4.0,,['pyhd8ed1ab_0'],0.4.0,conda-forge/napari-process-points-and-surfaces/0.4.0,1.0,0.0,2023-04-13 20:13:12.863000+00:00,2023-06-18 17:28:01.059000+00:00,conda,noarch/napari-process-points-and-surfaces-0.4.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['imageio !=2.22.1', 'napari', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.5.5', 'napari-time-slicer >=0.4.5', 'napari-tools-menu >=0.1.14', 'napari-workflows >=0.2.3', 'numpy', 'pandas', 'python >=3.8,<3.11', 'stackview >=0.5.2', 'vedo >=2022.4.1']",noarch,1681416649600.0,None-any-None,pyhd8ed1ab_0,2023-04-13 20:13:13.368000+00:00,ac1ca461f5209d17d34e50455dbb8722,7b3b7da8ac4f15938d2f57e3adadc34c85c03a2d6651d1a41534289127c799e1,1020801.0,conda-forge/napari-process-points-and-surfaces/0.4.0/noarch/napari-process-points-and-surfaces-0.4.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-process-points-and-surfaces/0.4.0/noarch/napari-process-points-and-surfaces-0.4.0-pyhd8ed1ab_0.conda,conda,0.4.0,conda-forge,['main'],public,,0.2.1,napari-process-points-and-surfaces.SurfaceAnnotationWidget,SurfaceAnnotationWidget,napari_process_points_and_surfaces._surface_annotation_widget:SurfaceAnnotationWidget,,,,2.1,napari-process-points-and-surfaces,0.5.0,,Process and analyze surfaces using open3d and vedo in napari,"# napari-process-points-and-surfaces (nppas) +",text/markdown,,Hieu Hoang,hthieu@illinois.edu,MIT,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['numpy', 'magicgui', 'qtpy', 'opencv-python', 'scipy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.7,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-pram.get_vgg_annot_reader,Open VGG annotation with napari PRAM,napari_pram._reader:reader_vgg_annot,napari-pram.write_multiple,Save multi-layer data with napari PRAM,napari_pram._writer:write_multiple,napari-pram.write_single_image,Save image data with napari PRAM,napari_pram._writer:write_single_image,napari-pram.open_panel,Open PRAM's toolbox,False,,,,,,,,,,napari-pram.make_sample_data,Load sample data from napari PRAM,napari_pram._sample_data:make_sample_data,napari-pram.write_multiple,"['image*', 'labels*']",,napari-pram.write_single_image,['image'],['.npy'],,napari-pram.make_sample_data,unique_id.1,napari PRAM,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-pram.make_qwidget,Make example QWidget,napari_pram._widget:ExampleQWidget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-pram.open_panel,Show PRAM toolbox,napari_pram.main_napari:PramQWidget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +301,napari-prism,0.1.3,napari prism,A Python package for the inteRactive and Integrated analySis of Multiplexed tissue microarrays,Rafael Tubelleza,MIT,https://github.com/clinicalomx/napari-prism,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-prism.get_reader,Open data with napari-prism,napari_prism.readers._readers:napari_get_reader,napari-prism.get_reader,"['*.qptiff', '*.zarr']",True,2.1,napari-prism,0.1.3,,A Python package for the inteRactive and Integrated analySis of Multiplexed tissue microarrays,"# PRISM: A **P**ython package for the inte**R**active and **I**ntegrated analy**S**is of **M**ultiplexed tissue microarrays + + + +[![License MIT](https://img.shields.io/pypi/l/napari-prism.svg?color=green)](https://github.com/clinicalomx/napari-prism/raw/main/LICENSE) +[![PyPI](https://img.shields.io/pypi/v/napari-prism.svg?color=green)](https://pypi.org/project/napari-prism) +[![Python Version](https://img.shields.io/pypi/pyversions/napari-prism.svg?color=green)](https://python.org) +[![tests](https://github.com/clinicalomx/napari-prism/workflows/tests/badge.svg)](https://github.com/clinicalomx/napari-prism/actions) +[![codecov](https://codecov.io/gh/clinicalomx/napari-prism/branch/main/graph/badge.svg)](https://codecov.io/gh/clinicalomx/napari-prism) +[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-prism)](https://napari-hub.org/plugins/napari-prism) + +**NOTE: PRISM is still in heavy development.** +PRISM or napari-prism is a package and [napari] plugin designed for interactive processing, analysing and visualising multiplxed tissue microarrays. + +Currently, end-to-end capabilities (i.e. starting from importing the raw image file, to basic spatial analysis of annotated cells) are available for images generated from the +Akoya Phenocycler™-Fusion platform. However, the modular structure of the +package allows for usage at any stage of processing and/or analysis, given a pre-built SpatialData object using readers from either +[spatialdata-io] or [sopa]. + +PRISM uses [spatialdata] as the core data framework, allowing for: + +1. The rich integration of tools from the ([scverse]) Python bioinformatics ecosystem with highly interactive graphical user interfaces from [napari] and [napari-spatialdata]. +2. The storage of images, shapes, annotations and their linked `AnnData` objects in a standardized, FAIR-compliant data structure, addressing the non-standard and fragmented organization of files before, during, and after a multiplexed image analysis pipeline. + +The package was designed to be used completely within the [napari] application and therefore require little to no knowledge of Python programming. Therefore, documentation for usage via the API is currently in progress. + +## Installation: CPU only + +Install this package via [pip]: + +```bash +pip install napari-prism +``` + +Install the latest development version: + +```bash +pip install git+https://github.com/clinicalomx/napari-prism.git@main +``` + +## Installation: GPU-accelerated + +### General computations with RAPIDS and rapids-singlecell + +General larger scale and/or computationally demanding functions can be accelerated with the [NVIDIA RAPIDS suite](https://rapids.ai/). We utilise some packages from this suite, as well as the GPU-accelerated implementation of scanpy with [rapids-singlecell]. + +1. [Check and configure the system requirements from RAPIDS](https://docs.rapids.ai/install/#system-req). + - Currently, only Linux distributions (or Windows systems with WSL2) are supported. + - Install the [CUDA12.2](https://developer.nvidia.com/cuda-12-2-2-download-archive) or [CUDA12.5](https://developer.nvidia.com/cuda-12-5-1-download-archive) toolkit. +2. Install the package together with [RAPIDS] and [rapids-singlecell] via [pip]: + +```bash +pip install napari-prism[gpu] --extra-index-url=https://pypi.nvidia.com +``` + +### Cell segmentation with Cellpose + +To run [cellpose] on the GPU, install the [CUDA version of PyTorch](https://pytorch.org/get-started/locally/). You may need to [remove any installed CPU versions of PyTorch](https://github.com/MouseLand/cellpose?tab=readme-ov-file#gpu-version-cuda-on-windows-or-linux). + +## Getting Started + +To start using `napari-prism`, please see the [tutorials](https://napari-prism.readthedocs.io/en/latest/notebooks/getting_started.html#): + +- [Getting started](https://napari-prism.readthedocs.io/en/latest/notebooks/getting_started.html) +- To learn how to interactively analyse raw .qptiff TMAs, see [TMA Image Analysis](https://napari-prism.readthedocs.io/en/latest/notebooks/tma_usage.html) +- To learn how to interactively analyse AnnData-contained SpatialData objects, see [Anndata Analysis](https://napari-prism.readthedocs.io/en/latest/notebooks/adata_usage.html) + +## Contributing + +Contributions are very welcome. Tests can be run with [tox], please ensure +the coverage at least stays the same before you submit a pull request. + +## License + +Distributed under the terms of the [MIT] license, +""napari-prism"" is free and open source software + +## Issues + +If you encounter any problems, please [file an issue] along with a detailed description. + +## Citation + +\*\*tba + +[napari]: https://github.com/napari/napari +[@napari]: https://github.com/napari +[MIT]: http://opensource.org/licenses/MIT +[BSD-3]: http://opensource.org/licenses/BSD-3-Clause +[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt +[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt +[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0 +[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt +[file an issue]: https://github.com/clinicalomx/napari-prism/issues +[tox]: https://tox.readthedocs.io/en/latest/ +[pip]: https://pypi.org/project/pip/ +[PyPI]: https://pypi.org/ +[PyTorch]: https://pytorch.org/ +[cellpose]: https://github.com/MouseLand/cellpose +[RAPIDS]: https://rapids.ai/ +[rapids-singlecell]: https://github.com/scverse/rapids_singlecell +[spatialdata]: https://github.com/scverse/spatialdata/tree/main +[napari-spatialdata]: https://github.com/scverse/napari-spatialdata/tree/main +[spatialdata-io]: https://github.com/scverse/spatialdata-io +[sopa]: https://github.com/gustaveroussy/sopa +[scverse]: https://scverse.org/ +",text/markdown,https://github.com/clinicalomx/napari-prism,Rafael Tubelleza,rafaelrtubelleza@gmail.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', 'spatialdata', 'imagecodecs', 'napari[all]==0.4.19.post1', 'napari-matplotlib<2.0.2', 'napari-spatialdata', 'matplotlib', 'PyComplexHeatmap', 'scikit-learn', 'cellpose>=3.0.10', 'scanpy>=1.10.0', 'phenograph', 'squidpy', 'kneed', 'ipykernel; extra == ""docs""', 'ipython; extra == ""docs""', 'myst-nb>=1.1; extra == ""docs""', 'myst-parser; extra == ""docs""', 'sphinx>=4; extra == ""docs""', 'sphinx-autodoc-typehints; extra == ""docs""', 'sphinx-book-theme>=1; extra == ""docs""', 'sphinx-copybutton; extra == ""docs""', 'sphinx-qt-documentation; extra == ""docs""', 'sphinxcontrib-bibtex>=1; extra == ""docs""', 'sphinx-tabs; extra == ""docs""', 'sphinxext-opengraph; extra == ""docs""', 'dask-cudf-cu12==24.10.*; extra == ""gpu""', 'rapids-singlecell[rapids12]; extra == ""gpu""', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-lazy-fixtures; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'qtpy; extra == ""testing""']",>=3.10,"['Bug Tracker, https://github.com/clinicalomx/napari-prism/issues', 'Documentation, https://github.com/clinicalomx/napari-prism#README.md', 'Source Code, https://github.com/clinicalomx/napari-prism', 'User Support, https://github.com/clinicalomx/napari-prism/issues']","['docs', 'gpu', 'testing']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-prism.TMAImageAnalysis,napari-prism.TMAImageAnalysis,napari_prism.widgets._tma_ops_widget:TMAImageAnalysisParentWidget,napari-prism.AnnDataAnalysis,napari-prism.AnnDataAnalysis,napari_prism.widgets._adata_ops_widget:AnnDataAnalysisParentWidget,,,,napari-prism.TMAImageAnalysis,TMA Image Analysis,False,napari-prism.AnnDataAnalysis,AnnData Analysis,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +302,napari-process-points-and-surfaces,0.5.0,napari-process-points-and-surfaces,Process and analyze surfaces using open3d and vedo in napari,"Robert Haase, Johannes Soltwedel",BSD-3-Clause,https://github.com/haesleinhuepf/napari-process-points-and-surfaces,6438625cb6840a3f6c791f9d,['conda'],,https://github.com/haesleinhuepf/napari-process-points-and-surfaces,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-process-points-and-surfaces,http://api.anaconda.org/packages/conda-forge/napari-process-points-and-surfaces,http://anaconda.org/conda-forge/napari-process-points-and-surfaces,"['0.4.0', '0.5.0']",0.5.0,0.5.0,['noarch'],4.0,,['pyhd8ed1ab_0'],0.4.0,conda-forge/napari-process-points-and-surfaces/0.4.0,1.0,0.0,2023-04-13 20:13:12.863000+00:00,2023-06-18 17:28:01.059000+00:00,conda,noarch/napari-process-points-and-surfaces-0.4.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['imageio !=2.22.1', 'napari', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.5.5', 'napari-time-slicer >=0.4.5', 'napari-tools-menu >=0.1.14', 'napari-workflows >=0.2.3', 'numpy', 'pandas', 'python >=3.8,<3.11', 'stackview >=0.5.2', 'vedo >=2022.4.1']",noarch,1681416649600.0,None-any-None,pyhd8ed1ab_0,2023-04-13 20:13:13.368000+00:00,ac1ca461f5209d17d34e50455dbb8722,7b3b7da8ac4f15938d2f57e3adadc34c85c03a2d6651d1a41534289127c799e1,1020801.0,conda-forge/napari-process-points-and-surfaces/0.4.0/noarch/napari-process-points-and-surfaces-0.4.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-process-points-and-surfaces/0.4.0/noarch/napari-process-points-and-surfaces-0.4.0-pyhd8ed1ab_0.conda,conda,0.4.0,conda-forge,['main'],public,,0.2.1,napari-process-points-and-surfaces.SurfaceAnnotationWidget,SurfaceAnnotationWidget,napari_process_points_and_surfaces._surface_annotation_widget:SurfaceAnnotationWidget,,,,2.1,napari-process-points-and-surfaces,0.5.0,,Process and analyze surfaces using open3d and vedo in napari,"# napari-process-points-and-surfaces (nppas) [![License](https://img.shields.io/pypi/l/napari-process-points-and-surfaces.svg?color=green)](https://github.com/haesleinhuepf/napari-process-points-and-surfaces/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-process-points-and-surfaces.svg?color=green)](https://pypi.org/project/napari-process-points-and-surfaces) @@ -30330,8 +31670,8 @@ If you encounter any problems, please create a thread on [image.sc] along with a [image.sc]: https://image.sc [@haesleinhuepf]: https://twitter.com/haesleinhuepf -",text/markdown,https://github.com/haesleinhuepf/napari-process-points-and-surfaces,"Robert Haase, Johannes Soltwedel",robert.haase@tu-dresden.de,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari', 'napari-tools-menu (>=0.1.14)', 'napari-time-slicer (>=0.4.5)', 'napari-workflows (>=0.2.3)', 'vedo (>=2022.4.1)', 'napari-skimage-regionprops (>=0.5.5)', 'pandas', 'imageio (!=2.22.1)', 'stackview (>=0.5.2)']",>=3.7,"['Bug Tracker, https://github.com/haesleinhuepf/napari-process-points-and-surfaces/issues', 'Documentation, https://github.com/haesleinhuepf/napari-process-points-and-surfaces#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-process-points-and-surfaces', 'User Support, https://github.com/haesleinhuepf/napari-process-points-and-surfaces/issues']",,True,0.5.0,conda-forge/napari-process-points-and-surfaces/0.5.0,,,,,conda,noarch/napari-process-points-and-surfaces-0.5.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['imageio !=2.22.1', 'napari', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.5.5', 'napari-time-slicer >=0.4.5', 'napari-tools-menu >=0.1.14', 'napari-workflows >=0.2.3', 'numpy', 'pandas', 'python >=3.8,<3.11', 'stackview >=0.5.2', 'vedo >=2022.4.1']",pyhd8ed1ab_0,1681447486974.0,None-any-None,noarch,2023-04-14 04:47:20.422000+00:00,593dacc60034a3918f1725b1e4c9ad32,c4e2dd4df53823c420e29f42df064404d1c68288a0cf9bebb93cb77eaebdaf27,1020636.0,conda-forge/napari-process-points-and-surfaces/0.5.0/noarch/napari-process-points-and-surfaces-0.5.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-process-points-and-surfaces/0.5.0/noarch/napari-process-points-and-surfaces-0.5.0-pyhd8ed1ab_0.conda,conda,0.5.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-process-points-and-surfaces.napari_experimental_provide_function,convex_hull,napari_process_points_and_surfaces:napari_experimental_provide_function,napari-process-points-and-surfaces.napari_experimental_provide_function,filter_smooth_simple,napari_process_points_and_surfaces:napari_experimental_provide_function,napari-process-points-and-surfaces.napari_experimental_provide_function,filter_smooth_laplacian,napari_process_points_and_surfaces:napari_experimental_provide_function,napari-process-points-and-surfaces.SurfaceAnnotationWidget,SurfaceAnnotationWidget,False,napari-process-points-and-surfaces.napari_experimental_provide_function,convex_hull,True,napari-process-points-and-surfaces.napari_experimental_provide_function,filter_smooth_simple,True,napari-process-points-and-surfaces.napari_experimental_provide_function,filter_smooth_laplacian,True,napari-process-points-and-surfaces.napari_experimental_provide_function,filter_smooth_taubin,napari_process_points_and_surfaces:napari_experimental_provide_function,,,,,,,,napari-process-points-and-surfaces._vedo_stanford_bunny_layerdatatuple,standford_bunny_nppas,Standford bunny (nppas),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-process-points-and-surfaces._vedo_ellipsoid_layerdatatuple,ellipsoid_nppas,Ellipsoid (nppas),napari-process-points-and-surfaces.napari_experimental_provide_function,simplify_vertex_clustering,napari_process_points_and_surfaces:napari_experimental_provide_function,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-process-points-and-surfaces.napari_experimental_provide_function,simplify_quadric_decimation,napari_process_points_and_surfaces:napari_experimental_provide_function,napari-process-points-and-surfaces.napari_experimental_provide_function,subdivide_loop,napari_process_points_and_surfaces:napari_experimental_provide_function,napari-process-points-and-surfaces.napari_experimental_provide_function,labels_to_centroids,napari_process_points_and_surfaces:napari_experimental_provide_function,napari-process-points-and-surfaces.napari_experimental_provide_function,sample_points_uniformly,napari_process_points_and_surfaces:napari_experimental_provide_function,napari-process-points-and-surfaces.napari_experimental_provide_function,sample_points_poisson_disk,napari_process_points_and_surfaces:napari_experimental_provide_function,napari-process-points-and-surfaces.napari_experimental_provide_function,voxel_down_sample,napari_process_points_and_surfaces:napari_experimental_provide_function,,napari-process-points-and-surfaces.napari_experimental_provide_function,filter_smooth_taubin,True,napari-process-points-and-surfaces.napari_experimental_provide_function,simplify_vertex_clustering,True,napari-process-points-and-surfaces.napari_experimental_provide_function,simplify_quadric_decimation,True,napari-process-points-and-surfaces.napari_experimental_provide_function,subdivide_loop,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-process-points-and-surfaces._vedo_gastruloid_layerdatatuple,"gastruloid_av_luque_and_jv_veenvliet_2023,_nppas","Gastruloid (AV Luque and JV Veenvliet (2023), nppas)" -290,napari-proofread-brainbow,0.3.0,napari proofread brainbow,proofreading Brainbow images with napari,Seongbin Lim,MIT,,6435e58fda6c28bc116ae563,['conda'],,https://pypi.org/project/napari-proofread-brainbow/,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-proofread-brainbow,http://api.anaconda.org/packages/conda-forge/napari-proofread-brainbow,http://anaconda.org/conda-forge/napari-proofread-brainbow,"['0.2.6', '0.3.0']",0.3.0,0.3.0,['noarch'],4.0,,['pyhd8ed1ab_0'],0.2.6,conda-forge/napari-proofread-brainbow/0.2.6,1.0,0.0,2023-04-11 22:56:12.785000+00:00,2023-06-18 17:27:59.777000+00:00,conda,noarch/napari-proofread-brainbow-0.2.6-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8,<3.11', 'qtpy']",noarch,1681253652330.0,None-any-None,pyhd8ed1ab_0,2023-04-11 22:56:13.252000+00:00,79d28bb1a55c0cea13d4e149bf425802,3622098b576097ef853fedd85acba38f36685f6ad386270cc7bf92b07e110ba6,13931.0,conda-forge/napari-proofread-brainbow/0.2.6/noarch/napari-proofread-brainbow-0.2.6-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-proofread-brainbow/0.2.6/noarch/napari-proofread-brainbow-0.2.6-pyhd8ed1ab_0.conda,conda,0.2.6,conda-forge,['main'],public,,0.2.1,napari-proofread-brainbow.make_qwidget,Make main proofreading widget,napari_proofread_brainbow._widget:MainWidget,,,,2.1,napari-proofread-brainbow,0.3.0,,proofreading Brainbow images with napari,"# napari-proofread-brainbow +",text/markdown,https://github.com/haesleinhuepf/napari-process-points-and-surfaces,"Robert Haase, Johannes Soltwedel",robert.haase@tu-dresden.de,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari', 'napari-tools-menu (>=0.1.14)', 'napari-time-slicer (>=0.4.5)', 'napari-workflows (>=0.2.3)', 'vedo (>=2022.4.1)', 'napari-skimage-regionprops (>=0.5.5)', 'pandas', 'imageio (!=2.22.1)', 'stackview (>=0.5.2)']",>=3.7,"['Bug Tracker, https://github.com/haesleinhuepf/napari-process-points-and-surfaces/issues', 'Documentation, https://github.com/haesleinhuepf/napari-process-points-and-surfaces#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-process-points-and-surfaces', 'User Support, https://github.com/haesleinhuepf/napari-process-points-and-surfaces/issues']",,True,0.5.0,conda-forge/napari-process-points-and-surfaces/0.5.0,,,,,conda,noarch/napari-process-points-and-surfaces-0.5.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['imageio !=2.22.1', 'napari', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.5.5', 'napari-time-slicer >=0.4.5', 'napari-tools-menu >=0.1.14', 'napari-workflows >=0.2.3', 'numpy', 'pandas', 'python >=3.8,<3.11', 'stackview >=0.5.2', 'vedo >=2022.4.1']",pyhd8ed1ab_0,1681447486974.0,None-any-None,noarch,2023-04-14 04:47:20.422000+00:00,593dacc60034a3918f1725b1e4c9ad32,c4e2dd4df53823c420e29f42df064404d1c68288a0cf9bebb93cb77eaebdaf27,1020636.0,conda-forge/napari-process-points-and-surfaces/0.5.0/noarch/napari-process-points-and-surfaces-0.5.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-process-points-and-surfaces/0.5.0/noarch/napari-process-points-and-surfaces-0.5.0-pyhd8ed1ab_0.conda,conda,0.5.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-process-points-and-surfaces.napari_experimental_provide_function,convex_hull,napari_process_points_and_surfaces:napari_experimental_provide_function,napari-process-points-and-surfaces.napari_experimental_provide_function,filter_smooth_simple,napari_process_points_and_surfaces:napari_experimental_provide_function,napari-process-points-and-surfaces.napari_experimental_provide_function,filter_smooth_laplacian,napari_process_points_and_surfaces:napari_experimental_provide_function,napari-process-points-and-surfaces.SurfaceAnnotationWidget,SurfaceAnnotationWidget,False,napari-process-points-and-surfaces.napari_experimental_provide_function,convex_hull,True,napari-process-points-and-surfaces.napari_experimental_provide_function,filter_smooth_simple,True,napari-process-points-and-surfaces.napari_experimental_provide_function,filter_smooth_laplacian,True,napari-process-points-and-surfaces.napari_experimental_provide_function,filter_smooth_taubin,napari_process_points_and_surfaces:napari_experimental_provide_function,,,,,,,,napari-process-points-and-surfaces._vedo_stanford_bunny_layerdatatuple,standford_bunny_nppas,Standford bunny (nppas),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-process-points-and-surfaces._vedo_ellipsoid_layerdatatuple,ellipsoid_nppas,Ellipsoid (nppas),napari-process-points-and-surfaces.napari_experimental_provide_function,simplify_vertex_clustering,napari_process_points_and_surfaces:napari_experimental_provide_function,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-process-points-and-surfaces.napari_experimental_provide_function,simplify_quadric_decimation,napari_process_points_and_surfaces:napari_experimental_provide_function,napari-process-points-and-surfaces.napari_experimental_provide_function,subdivide_loop,napari_process_points_and_surfaces:napari_experimental_provide_function,napari-process-points-and-surfaces.napari_experimental_provide_function,labels_to_centroids,napari_process_points_and_surfaces:napari_experimental_provide_function,napari-process-points-and-surfaces.napari_experimental_provide_function,sample_points_uniformly,napari_process_points_and_surfaces:napari_experimental_provide_function,napari-process-points-and-surfaces.napari_experimental_provide_function,sample_points_poisson_disk,napari_process_points_and_surfaces:napari_experimental_provide_function,,napari-process-points-and-surfaces.napari_experimental_provide_function,filter_smooth_taubin,True,napari-process-points-and-surfaces.napari_experimental_provide_function,simplify_vertex_clustering,True,napari-process-points-and-surfaces.napari_experimental_provide_function,simplify_quadric_decimation,True,napari-process-points-and-surfaces.napari_experimental_provide_function,subdivide_loop,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-process-points-and-surfaces._vedo_gastruloid_layerdatatuple,"gastruloid_av_luque_and_jv_veenvliet_2023,_nppas","Gastruloid (AV Luque and JV Veenvliet (2023), nppas)" +303,napari-proofread-brainbow,0.3.0,napari proofread brainbow,proofreading Brainbow images with napari,Seongbin Lim,MIT,,6435e58fda6c28bc116ae563,['conda'],,https://pypi.org/project/napari-proofread-brainbow/,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-proofread-brainbow,http://api.anaconda.org/packages/conda-forge/napari-proofread-brainbow,http://anaconda.org/conda-forge/napari-proofread-brainbow,"['0.2.6', '0.3.0']",0.3.0,0.3.0,['noarch'],4.0,,['pyhd8ed1ab_0'],0.2.6,conda-forge/napari-proofread-brainbow/0.2.6,1.0,0.0,2023-04-11 22:56:12.785000+00:00,2023-06-18 17:27:59.777000+00:00,conda,noarch/napari-proofread-brainbow-0.2.6-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8,<3.11', 'qtpy']",noarch,1681253652330.0,None-any-None,pyhd8ed1ab_0,2023-04-11 22:56:13.252000+00:00,79d28bb1a55c0cea13d4e149bf425802,3622098b576097ef853fedd85acba38f36685f6ad386270cc7bf92b07e110ba6,13931.0,conda-forge/napari-proofread-brainbow/0.2.6/noarch/napari-proofread-brainbow-0.2.6-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-proofread-brainbow/0.2.6/noarch/napari-proofread-brainbow-0.2.6-pyhd8ed1ab_0.conda,conda,0.2.6,conda-forge,['main'],public,,0.2.1,napari-proofread-brainbow.make_qwidget,Make main proofreading widget,napari_proofread_brainbow._widget:MainWidget,,,,2.1,napari-proofread-brainbow,0.3.0,,proofreading Brainbow images with napari,"# napari-proofread-brainbow [![License](https://img.shields.io/pypi/l/napari-proofread-brainbow.svg?color=green)](https://github.com/sbinnee/napari-proofread-brainbow/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-proofread-brainbow.svg?color=green)](https://pypi.org/project/napari-proofread-brainbow) @@ -30392,8 +31732,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,,Seongbin Lim,seongbin.lim@polytechnique.edu,MIT,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""pytest-xvfb ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""qtpy ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,,['testing'],False,0.3.0,conda-forge/napari-proofread-brainbow/0.3.0,,,,,conda,noarch/napari-proofread-brainbow-0.3.0-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy']",pyhd8ed1ab_0,1682325122808.0,None-any-None,noarch,2023-04-24 08:34:29.641000+00:00,d38c4ced655105c684b9113a38d4b1bf,d08973ceb65609953decc875c9c43e106f7b19bda5c50e534fd3c97bfac9f493,14676.0,conda-forge/napari-proofread-brainbow/0.3.0/noarch/napari-proofread-brainbow-0.3.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-proofread-brainbow/0.3.0/noarch/napari-proofread-brainbow-0.3.0-pyhd8ed1ab_0.conda,conda,0.3.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-proofread-brainbow.threshold_prob,Make threshold widget,napari_proofread_brainbow._widget:threshold_prob,,,,,,,napari-proofread-brainbow.make_qwidget,Proofread Brainbow,False,napari-proofread-brainbow.threshold_prob,Threshold probability (csv),False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -291,napari-properties-plotter,0.2.2,napari-properties-plotter,A napari plugin that automatically generates interactive plots based on layer properties.,Lorenzo Gaifas,BSD-3,https://github.com/brisvag/napari-properties-plotter,61f3b4d4414b5ba20e93733b,['conda'],,https://github.com/brisvag/napari-properties-plotter,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-properties-plotter,http://api.anaconda.org/packages/conda-forge/napari-properties-plotter,http://anaconda.org/conda-forge/napari-properties-plotter,['0.2.2'],0.2.2,0.2.2,['noarch'],3.0,,['pyhd8ed1ab_0'],0.2.2,conda-forge/napari-properties-plotter/0.2.2,1.0,0.0,2022-01-28 09:18:10.124000+00:00,2023-06-18 08:40:39.025000+00:00,conda,noarch/napari-properties-plotter-0.2.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'pandas', 'pyqtgraph', 'python >=3.7', 'qtpy']",noarch,1643361332064.0,None-any-None,pyhd8ed1ab_0,2022-01-28 09:18:10.685000+00:00,733e5e0f53c3a5523da3d2efd142b5fd,None,13419.0,conda-forge/napari-properties-plotter/0.2.2/noarch/napari-properties-plotter-0.2.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-properties-plotter/0.2.2/noarch/napari-properties-plotter-0.2.2-pyhd8ed1ab_0.tar.bz2,conda,0.2.2,conda-forge,['main'],public,,0.2.1,napari-properties-plotter.PropertyPlotter,PropertyPlotter,napari_properties_plotter.property_plotter:PropertyPlotter,,,,2.1,napari-properties-plotter,0.2.2,['UNKNOWN'],A napari plugin that automatically generates interactive plots based on layer properties.,"# napari-properties-plotter +",text/markdown,,Seongbin Lim,seongbin.lim@polytechnique.edu,MIT,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""pytest-xvfb ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""qtpy ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,,['testing'],False,0.3.0,conda-forge/napari-proofread-brainbow/0.3.0,,,,,conda,noarch/napari-proofread-brainbow-0.3.0-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy']",pyhd8ed1ab_0,1682325122808.0,None-any-None,noarch,2023-04-24 08:34:29.641000+00:00,d38c4ced655105c684b9113a38d4b1bf,d08973ceb65609953decc875c9c43e106f7b19bda5c50e534fd3c97bfac9f493,14676.0,conda-forge/napari-proofread-brainbow/0.3.0/noarch/napari-proofread-brainbow-0.3.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-proofread-brainbow/0.3.0/noarch/napari-proofread-brainbow-0.3.0-pyhd8ed1ab_0.conda,conda,0.3.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-proofread-brainbow.threshold_prob,Make threshold widget,napari_proofread_brainbow._widget:threshold_prob,,,,,,,napari-proofread-brainbow.make_qwidget,Proofread Brainbow,False,napari-proofread-brainbow.threshold_prob,Threshold probability (csv),False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +304,napari-properties-plotter,0.2.2,napari-properties-plotter,A napari plugin that automatically generates interactive plots based on layer properties.,Lorenzo Gaifas,BSD-3,https://github.com/brisvag/napari-properties-plotter,61f3b4d4414b5ba20e93733b,['conda'],,https://github.com/brisvag/napari-properties-plotter,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-properties-plotter,http://api.anaconda.org/packages/conda-forge/napari-properties-plotter,http://anaconda.org/conda-forge/napari-properties-plotter,['0.2.2'],0.2.2,0.2.2,['noarch'],3.0,,['pyhd8ed1ab_0'],0.2.2,conda-forge/napari-properties-plotter/0.2.2,1.0,0.0,2022-01-28 09:18:10.124000+00:00,2023-06-18 08:40:39.025000+00:00,conda,noarch/napari-properties-plotter-0.2.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'pandas', 'pyqtgraph', 'python >=3.7', 'qtpy']",noarch,1643361332064.0,None-any-None,pyhd8ed1ab_0,2022-01-28 09:18:10.685000+00:00,733e5e0f53c3a5523da3d2efd142b5fd,None,13419.0,conda-forge/napari-properties-plotter/0.2.2/noarch/napari-properties-plotter-0.2.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-properties-plotter/0.2.2/noarch/napari-properties-plotter-0.2.2-pyhd8ed1ab_0.tar.bz2,conda,0.2.2,conda-forge,['main'],public,,0.2.1,napari-properties-plotter.PropertyPlotter,PropertyPlotter,napari_properties_plotter.property_plotter:PropertyPlotter,,,,2.1,napari-properties-plotter,0.2.2,['UNKNOWN'],A napari plugin that automatically generates interactive plots based on layer properties.,"# napari-properties-plotter [![License](https://img.shields.io/pypi/l/napari-properties-plotter.svg?color=green)](https://github.com/brisvag/napari-properties-plotter/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-properties-plotter.svg?color=green)](https://pypi.org/project/napari-properties-plotter) @@ -30452,8 +31792,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/brisvag/napari-properties-plotter,Lorenzo Gaifas,lorenzo.gaifas@gmail.com,BSD-3,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'pandas', 'pyqtgraph', 'qtpy']",>=3.7,"['Bug Tracker, https://github.com/brisvag/napari-properties-plotter/issues', 'Documentation, https://github.com/brisvag/napari-properties-plotter#README.md', 'Source Code, https://github.com/brisvag/napari-properties-plotter', 'User Support, https://github.com/brisvag/napari-properties-plotter/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-properties-plotter.PropertyPlotter,PropertyPlotter,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -292,napari-properties-viewer,0.0.2,napari-properties-viewer,A viewer for napari layer properties,Kevin Yamauchi,BSD-3,https://github.com/kevinyamauchi/napari-properties-viewer,62050a824645634239eee6f3,['conda'],,https://github.com/kevinyamauchi/napari-properties-viewer,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-properties-viewer,http://api.anaconda.org/packages/conda-forge/napari-properties-viewer,http://anaconda.org/conda-forge/napari-properties-viewer,['0.0.2'],0.0.2,0.0.2,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.2,conda-forge/napari-properties-viewer/0.0.2,1.0,0.0,2022-02-10 12:52:14.641000+00:00,2023-06-18 08:40:49.119000+00:00,conda,noarch/napari-properties-viewer-0.0.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.6']",noarch,1644497377895.0,None-any-None,pyhd8ed1ab_0,2022-02-10 12:52:15.576000+00:00,3d703de839614293c7be533d0ab41566,None,11502.0,conda-forge/napari-properties-viewer/0.0.2/noarch/napari-properties-viewer-0.0.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-properties-viewer/0.0.2/noarch/napari-properties-viewer-0.0.2-pyhd8ed1ab_0.tar.bz2,conda,0.0.2,conda-forge,['main'],public,,0.2.1,napari-properties-viewer.QtPropertiesTable,QtPropertiesTable,napari_properties_viewer.qt_properties_table:QtPropertiesTable,,,,2.1,napari-properties-viewer,0.0.2,['UNKNOWN'],A viewer for napari layer properties,"# napari-properties-viewer +",text/markdown,https://github.com/brisvag/napari-properties-plotter,Lorenzo Gaifas,lorenzo.gaifas@gmail.com,BSD-3,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'pandas', 'pyqtgraph', 'qtpy']",>=3.7,"['Bug Tracker, https://github.com/brisvag/napari-properties-plotter/issues', 'Documentation, https://github.com/brisvag/napari-properties-plotter#README.md', 'Source Code, https://github.com/brisvag/napari-properties-plotter', 'User Support, https://github.com/brisvag/napari-properties-plotter/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-properties-plotter.PropertyPlotter,PropertyPlotter,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +305,napari-properties-viewer,0.0.2,napari-properties-viewer,A viewer for napari layer properties,Kevin Yamauchi,BSD-3,https://github.com/kevinyamauchi/napari-properties-viewer,62050a824645634239eee6f3,['conda'],,https://github.com/kevinyamauchi/napari-properties-viewer,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-properties-viewer,http://api.anaconda.org/packages/conda-forge/napari-properties-viewer,http://anaconda.org/conda-forge/napari-properties-viewer,['0.0.2'],0.0.2,0.0.2,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.2,conda-forge/napari-properties-viewer/0.0.2,1.0,0.0,2022-02-10 12:52:14.641000+00:00,2023-06-18 08:40:49.119000+00:00,conda,noarch/napari-properties-viewer-0.0.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.6']",noarch,1644497377895.0,None-any-None,pyhd8ed1ab_0,2022-02-10 12:52:15.576000+00:00,3d703de839614293c7be533d0ab41566,None,11502.0,conda-forge/napari-properties-viewer/0.0.2/noarch/napari-properties-viewer-0.0.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-properties-viewer/0.0.2/noarch/napari-properties-viewer-0.0.2-pyhd8ed1ab_0.tar.bz2,conda,0.0.2,conda-forge,['main'],public,,0.2.1,napari-properties-viewer.QtPropertiesTable,QtPropertiesTable,napari_properties_viewer.qt_properties_table:QtPropertiesTable,,,,2.1,napari-properties-viewer,0.0.2,['UNKNOWN'],A viewer for napari layer properties,"# napari-properties-viewer [![License](https://img.shields.io/pypi/l/napari-properties-viewer.svg?color=green)](https://github.com/napari/napari-properties-viewer/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-properties-viewer.svg?color=green)](https://pypi.org/project/napari-properties-viewer) @@ -30519,8 +31859,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/kevinyamauchi/napari-properties-viewer,Kevin Yamauchi,kevin.yamauchi@gmail.com,BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy']",>=3.6,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-properties-viewer.QtPropertiesTable,QtPropertiesTable,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -293,napari-psf-simulator,0.3.1,PSF simulator,"A plugin for simulations of the Point Spread Function, with aberrations",Andrea Bassi,BSD-3-Clause,https://github.com/andreabassi78/napari-psf-simulator,62c69fd0a9b86c6f9b8909e3,['conda'],,https://github.com/andreabassi78/napari-psf-simulator,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-psf-simulator,http://api.anaconda.org/packages/conda-forge/napari-psf-simulator,http://anaconda.org/conda-forge/napari-psf-simulator,"['0.1.5', '0.2.0', '0.2.1', '0.3.0', '0.3.1']",0.3.1,0.3.1,['noarch'],11.0,https://github.com/andreabassi78/napari-psf-simulator,['pyhd8ed1ab_0'],0.1.5,conda-forge/napari-psf-simulator/0.1.5,1.0,0.0,2022-07-07 08:56:45.345000+00:00,2023-11-07 00:05:50.267000+00:00,conda,noarch/napari-psf-simulator-0.1.5-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'scipy']",noarch,1657184082176.0,None-any-None,pyhd8ed1ab_0,2022-07-07 08:56:46.413000+00:00,d18b097ed4018e5584e1457df16fb86a,None,24715.0,conda-forge/napari-psf-simulator/0.1.5/noarch/napari-psf-simulator-0.1.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-psf-simulator/0.1.5/noarch/napari-psf-simulator-0.1.5-pyhd8ed1ab_0.tar.bz2,conda,0.1.5,conda-forge,['main'],public,,0.2.1,napari-psf-simulator.make_widget,PSF simulator,napari_psf_simulator._widget:Psf_widget,,,,2.1,napari-psf-simulator,0.3.1,,"A plugin for simulations of the Point Spread Function, with aberrations","# napari-psf-simulator +",text/markdown,https://github.com/kevinyamauchi/napari-properties-viewer,Kevin Yamauchi,kevin.yamauchi@gmail.com,BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy']",>=3.6,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-properties-viewer.QtPropertiesTable,QtPropertiesTable,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +306,napari-psf-simulator,0.3.1,PSF simulator,"A plugin for simulations of the Point Spread Function, with aberrations",Andrea Bassi,BSD-3-Clause,https://github.com/andreabassi78/napari-psf-simulator,62c69fd0a9b86c6f9b8909e3,['conda'],,https://github.com/andreabassi78/napari-psf-simulator,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-psf-simulator,http://api.anaconda.org/packages/conda-forge/napari-psf-simulator,http://anaconda.org/conda-forge/napari-psf-simulator,"['0.1.5', '0.2.0', '0.2.1', '0.3.0', '0.3.1']",0.3.1,0.3.1,['noarch'],11.0,https://github.com/andreabassi78/napari-psf-simulator,['pyhd8ed1ab_0'],0.1.5,conda-forge/napari-psf-simulator/0.1.5,1.0,0.0,2022-07-07 08:56:45.345000+00:00,2023-11-07 00:05:50.267000+00:00,conda,noarch/napari-psf-simulator-0.1.5-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'scipy']",noarch,1657184082176.0,None-any-None,pyhd8ed1ab_0,2022-07-07 08:56:46.413000+00:00,d18b097ed4018e5584e1457df16fb86a,None,24715.0,conda-forge/napari-psf-simulator/0.1.5/noarch/napari-psf-simulator-0.1.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-psf-simulator/0.1.5/noarch/napari-psf-simulator-0.1.5-pyhd8ed1ab_0.tar.bz2,conda,0.1.5,conda-forge,['main'],public,,0.2.1,napari-psf-simulator.make_widget,PSF simulator,napari_psf_simulator._widget:Psf_widget,,,,2.1,napari-psf-simulator,0.3.1,,"A plugin for simulations of the Point Spread Function, with aberrations","# napari-psf-simulator [![License](https://img.shields.io/pypi/l/napari-psf-simulator.svg?color=green)](https://github.com/andreabassi78/napari-psf-simulator/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-psf-simulator.svg?color=green)](https://pypi.org/project/napari-psf-simulator) @@ -30630,8 +31970,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [this]: https://github.com/andreabassi78/napari-psf-simulator/raw/main/docs/napari_psf_simullator_presentation.pdf [here]: https://github.com/andreabassi78/napari-psf-simulator/raw/main/docs/pyfocus_seminar.pptx -",text/markdown,https://github.com/andreabassi78/napari-psf-simulator,Andrea Bassi,andrea1.bassi@polimi.it,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['numpy', 'magicgui', 'qtpy', 'PyCustomFocus >=3.3.6', 'matplotlib', 'scikit-image', 'scipy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""qtpy ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""PyCustomFocus >=3.3.6 ; extra == 'testing'"", ""matplotlib ; extra == 'testing'"", ""scikit-image ; extra == 'testing'"", ""scipy ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/andreabassi78/napari-psf-simulator/issues', 'Documentation, https://github.com/andreabassi78/napari-psf-simulator#README.md', 'Source Code, https://github.com/andreabassi78/napari-psf-simulator', 'User Support, https://github.com/andreabassi78/napari-psf-simulator/issues']",['testing'],False,0.2.0,conda-forge/napari-psf-simulator/0.2.0,0.2.1,conda-forge/napari-psf-simulator/0.2.1,0.3.0,conda-forge/napari-psf-simulator/0.3.0,conda,noarch/napari-psf-simulator-0.2.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'pycustomfocus >=3.3.6', 'python >=3.8,<3.11', 'qtpy', 'scikit-image', 'scipy']",pyhd8ed1ab_0,1694808541266.0,None-any-None,noarch,2023-09-15 20:10:46.809000+00:00,e38acabf547d114dbd2e54990e8f3941,27467c5c9dd6548e1aa31db16005ff962b02c401483decc9795ae59df7631890,31940.0,conda-forge/napari-psf-simulator/0.2.0/noarch/napari-psf-simulator-0.2.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-psf-simulator/0.2.0/noarch/napari-psf-simulator-0.2.0-pyhd8ed1ab_0.conda,conda,0.2.0,conda-forge,['main'],conda,noarch/napari-psf-simulator-0.2.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'pycustomfocus >=3.3.6', 'python >=3.8,<3.11', 'qtpy', 'scikit-image', 'scipy']",noarch,1694811057295.0,None-any-None,pyhd8ed1ab_0,2023-09-15 20:52:46.710000+00:00,61c388d121a1ff4bb10ef43979f56151,846b39ad85b1b05963b348d1647c6dd54143bf91771d65bd3c8f8a67ff1c0909,31892.0,conda-forge/napari-psf-simulator/0.2.1/noarch/napari-psf-simulator-0.2.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-psf-simulator/0.2.1/noarch/napari-psf-simulator-0.2.1-pyhd8ed1ab_0.conda,conda,0.2.1,conda-forge,['main'],conda,noarch/napari-psf-simulator-0.3.0-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'pycustomfocus >=3.3.6', 'python >=3.8,<3.11', 'qtpy', 'scikit-image', 'scipy']",BSD-3-Clause,python,1698085628637.0,2023-10-23 18:28:46.301000+00:00,e3f3b26ac4046022d38e25ed96303ee9,14d0a9a148b1b8f1a1038d5dba4b9284c88081a6b0d7105c4b37bc2d3d415280,32232.0,conda-forge/napari-psf-simulator/0.3.0/noarch/napari-psf-simulator-0.3.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-psf-simulator/0.3.0/noarch/napari-psf-simulator-0.3.0-pyhd8ed1ab_0.conda,conda,0.3.0,conda-forge,['main'],,napari-psf-simulator.make_calculator_widget,PSF combiner,napari_psf_simulator._calculator_widget:calculate,napari-psf-simulator.make_contrast_widget,Contrast setter,napari_psf_simulator._contrast_widget:set_contrast,,,,napari-psf-simulator.make_widget,PSF simulator widget,False,napari-psf-simulator.make_calculator_widget,PSF combiner widget,False,napari-psf-simulator.make_contrast_widget,Contrast setter widget,False,,,,,,,,,,,,,,,,,0.3.1,conda-forge/napari-psf-simulator/0.3.1,,,,,conda,noarch/napari-psf-simulator-0.3.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'pycustomfocus >=3.3.6', 'python >=3.8,<3.11', 'qtpy', 'scikit-image', 'scipy']",noarch,1699315462555.0,None-any-None,pyhd8ed1ab_0,2023-11-07 00:05:48.277000+00:00,9840438cfba120138adfbad6dee7e547,0bd08232390f3646c6c8774e1bd7eab3720a580578697e926b9f58e3a0e48d97,32302.0,conda-forge/napari-psf-simulator/0.3.1/noarch/napari-psf-simulator-0.3.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-psf-simulator/0.3.1/noarch/napari-psf-simulator-0.3.1-pyhd8ed1ab_0.conda,conda,0.3.1,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -294,napari-pssr,0.1,napari PSSR,A plugin for training and applying pssr,William Patton,MIT,https://github.com/pattonw/napari-pssr,643eb5dd841ba63b2421b8ed,['conda'],,https://github.com/pattonw/napari-pssr,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-pssr,http://api.anaconda.org/packages/conda-forge/napari-pssr,http://anaconda.org/conda-forge/napari-pssr,['0.1'],0.1,0.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1,conda-forge/napari-pssr/0.1,1.0,0.0,2023-04-18 15:23:03.104000+00:00,2023-06-18 17:28:02.691000+00:00,conda,noarch/napari-pssr-0.1-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['bioimageio.core', 'gunpowder', 'magicgui', 'matplotlib-base', 'napari', 'numpy', 'python >=3.7', 'pytorch', 'zarr']",noarch,1681831157480.0,None-any-None,pyhd8ed1ab_0,2023-04-18 15:23:03.906000+00:00,aef335ce0dd91d689eea3371d5f9909a,a25cfd6a4aee0a2c8c5216c62333eeaa8a23a76e8c5f425562d13d4af54cb9f5,45375741.0,conda-forge/napari-pssr/0.1/noarch/napari-pssr-0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-pssr/0.1/noarch/napari-pssr-0.1-pyhd8ed1ab_0.conda,conda,0.1,conda-forge,['main'],public,,0.2.1,napari-pssr.make_pssr_widget,Make model widget,napari_pssr.widgets.pssr:ModelWidget,,,,2.1,napari-pssr,0.1,,A plugin for training and applying pssr,"# napari-pssr +",text/markdown,https://github.com/andreabassi78/napari-psf-simulator,Andrea Bassi,andrea1.bassi@polimi.it,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['numpy', 'magicgui', 'qtpy', 'PyCustomFocus >=3.3.6', 'matplotlib', 'scikit-image', 'scipy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""qtpy ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""PyCustomFocus >=3.3.6 ; extra == 'testing'"", ""matplotlib ; extra == 'testing'"", ""scikit-image ; extra == 'testing'"", ""scipy ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/andreabassi78/napari-psf-simulator/issues', 'Documentation, https://github.com/andreabassi78/napari-psf-simulator#README.md', 'Source Code, https://github.com/andreabassi78/napari-psf-simulator', 'User Support, https://github.com/andreabassi78/napari-psf-simulator/issues']",['testing'],False,0.2.0,conda-forge/napari-psf-simulator/0.2.0,0.2.1,conda-forge/napari-psf-simulator/0.2.1,0.3.0,conda-forge/napari-psf-simulator/0.3.0,conda,noarch/napari-psf-simulator-0.2.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'pycustomfocus >=3.3.6', 'python >=3.8,<3.11', 'qtpy', 'scikit-image', 'scipy']",pyhd8ed1ab_0,1694808541266.0,None-any-None,noarch,2023-09-15 20:10:46.809000+00:00,e38acabf547d114dbd2e54990e8f3941,27467c5c9dd6548e1aa31db16005ff962b02c401483decc9795ae59df7631890,31940.0,conda-forge/napari-psf-simulator/0.2.0/noarch/napari-psf-simulator-0.2.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-psf-simulator/0.2.0/noarch/napari-psf-simulator-0.2.0-pyhd8ed1ab_0.conda,conda,0.2.0,conda-forge,['main'],conda,noarch/napari-psf-simulator-0.2.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'pycustomfocus >=3.3.6', 'python >=3.8,<3.11', 'qtpy', 'scikit-image', 'scipy']",noarch,1694811057295.0,None-any-None,pyhd8ed1ab_0,2023-09-15 20:52:46.710000+00:00,61c388d121a1ff4bb10ef43979f56151,846b39ad85b1b05963b348d1647c6dd54143bf91771d65bd3c8f8a67ff1c0909,31892.0,conda-forge/napari-psf-simulator/0.2.1/noarch/napari-psf-simulator-0.2.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-psf-simulator/0.2.1/noarch/napari-psf-simulator-0.2.1-pyhd8ed1ab_0.conda,conda,0.2.1,conda-forge,['main'],conda,noarch/napari-psf-simulator-0.3.0-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'pycustomfocus >=3.3.6', 'python >=3.8,<3.11', 'qtpy', 'scikit-image', 'scipy']",BSD-3-Clause,python,1698085628637.0,2023-10-23 18:28:46.301000+00:00,e3f3b26ac4046022d38e25ed96303ee9,14d0a9a148b1b8f1a1038d5dba4b9284c88081a6b0d7105c4b37bc2d3d415280,32232.0,conda-forge/napari-psf-simulator/0.3.0/noarch/napari-psf-simulator-0.3.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-psf-simulator/0.3.0/noarch/napari-psf-simulator-0.3.0-pyhd8ed1ab_0.conda,conda,0.3.0,conda-forge,['main'],,napari-psf-simulator.make_calculator_widget,PSF combiner,napari_psf_simulator._calculator_widget:calculate,napari-psf-simulator.make_contrast_widget,Contrast setter,napari_psf_simulator._contrast_widget:set_contrast,,,,napari-psf-simulator.make_widget,PSF simulator widget,False,napari-psf-simulator.make_calculator_widget,PSF combiner widget,False,napari-psf-simulator.make_contrast_widget,Contrast setter widget,False,,,,,,,,,,,,,,,,,0.3.1,conda-forge/napari-psf-simulator/0.3.1,,,,,conda,noarch/napari-psf-simulator-0.3.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'pycustomfocus >=3.3.6', 'python >=3.8,<3.11', 'qtpy', 'scikit-image', 'scipy']",noarch,1699315462555.0,None-any-None,pyhd8ed1ab_0,2023-11-07 00:05:48.277000+00:00,9840438cfba120138adfbad6dee7e547,0bd08232390f3646c6c8774e1bd7eab3720a580578697e926b9f58e3a0e48d97,32302.0,conda-forge/napari-psf-simulator/0.3.1/noarch/napari-psf-simulator-0.3.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-psf-simulator/0.3.1/noarch/napari-psf-simulator-0.3.1-pyhd8ed1ab_0.conda,conda,0.3.1,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +307,napari-pssr,0.1,napari PSSR,A plugin for training and applying pssr,William Patton,MIT,https://github.com/pattonw/napari-pssr,643eb5dd841ba63b2421b8ed,['conda'],,https://github.com/pattonw/napari-pssr,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-pssr,http://api.anaconda.org/packages/conda-forge/napari-pssr,http://anaconda.org/conda-forge/napari-pssr,['0.1'],0.1,0.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1,conda-forge/napari-pssr/0.1,1.0,0.0,2023-04-18 15:23:03.104000+00:00,2023-06-18 17:28:02.691000+00:00,conda,noarch/napari-pssr-0.1-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['bioimageio.core', 'gunpowder', 'magicgui', 'matplotlib-base', 'napari', 'numpy', 'python >=3.7', 'pytorch', 'zarr']",noarch,1681831157480.0,None-any-None,pyhd8ed1ab_0,2023-04-18 15:23:03.906000+00:00,aef335ce0dd91d689eea3371d5f9909a,a25cfd6a4aee0a2c8c5216c62333eeaa8a23a76e8c5f425562d13d4af54cb9f5,45375741.0,conda-forge/napari-pssr/0.1/noarch/napari-pssr-0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-pssr/0.1/noarch/napari-pssr-0.1-pyhd8ed1ab_0.conda,conda,0.1,conda-forge,['main'],public,,0.2.1,napari-pssr.make_pssr_widget,Make model widget,napari_pssr.widgets.pssr:ModelWidget,,,,2.1,napari-pssr,0.1,,A plugin for training and applying pssr,"# napari-pssr [![License](https://img.shields.io/pypi/l/napari-pssr.svg?color=green)](https://github.com/pattonw/napari-pssr/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-pssr.svg?color=green)](https://pypi.org/project/napari-pssr) @@ -30712,197 +32052,120 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/pattonw/napari-pssr,William Patton,will.hunter.patton@gmail.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['numpy', 'zarr', 'magicgui', 'bioimageio.core', 'gunpowder', 'matplotlib', 'torch', 'napari']",>=3.7,"['Bug Tracker, https://github.com/pattonw/napari-pssr/issues', 'Documentation, https://github.com/pattonw/napari-pssr#README.md', 'Source Code, https://github.com/pattonw/napari-pssr', 'User Support, https://github.com/pattonw/napari-pssr/issues']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-pssr.lr_em,Load low res em for pssr,napari_pssr.sample_data:lr_em,napari-pssr.hr_em,Load high res em for pssr comparison,napari_pssr.sample_data:hr_em,napari-pssr.lr_large,Load low res em for large image,napari_pssr.sample_data:lr_large,napari-pssr.make_pssr_widget,PSSR Widget,False,,,,,,,,,,,,,,,,,,,,napari-pssr.lr_em,lr_em.0,8nm EM,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-pssr.hr_em,hr_em.0,2nm EM,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-pssr.lr_large,lr_em.1,large 8nm EM -295,napari-pyclesperanto-assistant,0.22.1,napari-pyclesperanto-assistant,GPU-accelerated image processing in napari using OpenCL,"Robert Haase, Talley Lambert",BSD-3-Clause,https://github.com/clesperanto/napari_pyclesperanto_assistant,6246dc8aaf92e1173d3e5122,['conda'],,https://github.com/clesperanto/napari_pyclesperanto_assistant,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-pyclesperanto-assistant,http://api.anaconda.org/packages/conda-forge/napari-pyclesperanto-assistant,http://anaconda.org/conda-forge/napari-pyclesperanto-assistant,"['0.12.0', '0.16.0', '0.17.1', '0.18.0', '0.18.3', '0.18.4', '0.19.0', '0.20.0', '0.21.0', '0.21.1', '0.21.2', '0.22.0', '0.22.1']",0.22.1,0.22.1,['noarch'],15.0,,['pyhd8ed1ab_0'],0.12.0,conda-forge/napari-pyclesperanto-assistant/0.12.0,1.0,0.0,2022-04-01 11:05:43.975000+00:00,2023-06-18 08:41:10.051000+00:00,conda,noarch/napari-pyclesperanto-assistant-0.12.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['jupyter', 'jupytext', 'loguru', 'magicgui', 'napari >=0.4.7', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-tools-menu >=0.1.8', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pandas', 'pyclesperanto-prototype >=0.12.0', 'pyopencl', 'pyperclip', 'python >=3.6', 'scikit-image', 'toolz']",noarch,1648810968323.0,None-any-None,pyhd8ed1ab_0,2022-04-01 11:05:44.777000+00:00,d20431139506b869ce5f196d92614fcd,None,125324.0,conda-forge/napari-pyclesperanto-assistant/0.12.0/noarch/napari-pyclesperanto-assistant-0.12.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-pyclesperanto-assistant/0.12.0/noarch/napari-pyclesperanto-assistant-0.12.0-pyhd8ed1ab_0.tar.bz2,conda,0.12.0,conda-forge,['main'],public,,0.2.1,napari-pyclesperanto-assistant.Assistant,Assistant,napari_pyclesperanto_assistant._gui:Assistant,,,,2.1,napari-pyclesperanto-assistant,0.22.1,,GPU-accelerated image processing in napari using OpenCL,"# napari-pyclesperanto-assistant -[![Image.sc forum](https://img.shields.io/badge/dynamic/json.svg?label=forum&url=https%3A%2F%2Fforum.image.sc%2Ftag%2Fclesperanto.json&query=%24.topic_list.tags.0.topic_count&colorB=brightgreen&suffix=%20topics&logo=data:image/png;base64,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)](https://forum.image.sc/tag/clesperanto) -[![website](https://img.shields.io/website?url=http%3A%2F%2Fclesperanto.net)](http://clesperanto.net) -[![License](https://img.shields.io/pypi/l/napari-pyclesperanto-assistant.svg?color=green)](https://github.com/clesperanto/napari-pyclesperanto-assistant/raw/master/LICENSE) -[![PyPI](https://img.shields.io/pypi/v/napari-pyclesperanto-assistant.svg?color=green)](https://pypi.org/project/napari-pyclesperanto-assistant) -[![Python Version](https://img.shields.io/pypi/pyversions/napari-pyclesperanto-assistant.svg?color=green)](https://python.org) -[![tests](https://github.com/clesperanto/napari_pyclesperanto_assistant/workflows/tests/badge.svg)](https://github.com/clesperanto/napari_pyclesperanto_assistant/actions) -[![codecov](https://codecov.io/gh/clesperanto/napari_pyclesperanto_assistant/branch/master/graph/badge.svg)](https://codecov.io/gh/clesperanto/napari_pyclesperanto_assistant) -[![Development Status](https://img.shields.io/pypi/status/napari_pyclesperanto_assistant.svg)](https://en.wikipedia.org/wiki/Software_release_life_cycle#Alpha) -[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-pyclesperanto-assistant)](https://napari-hub.org/plugins/napari-pyclesperanto-assistant) -[![DOI](https://zenodo.org/badge/322312181.svg)](https://zenodo.org/badge/latestdoi/322312181) - -The py-clEsperanto-assistant is a yet experimental [napari](https://github.com/napari/napari) plugin for building GPU-accelerated image processing workflows. -It is part of the [clEsperanto](http://clesperanto.net) project and thus, aims at removing programming language related barriers between image processing ecosystems in the life sciences. -It uses [pyclesperanto](https://github.com/clEsperanto/pyclesperanto_prototype) and with that [pyopencl](https://documen.tician.de/pyopencl/) as backend for processing images. - -This napari plugin adds some menu entries to the Tools menu. You can recognize them with their suffix `(clEsperanto)` in brackets. -Furthermore, it can be used from the [napari-assistant](https://www.napari-hub.org/plugins/napari-assistant) graphical user interface. -Therefore, just click the menu `Tools > Utilities > Assistant (na)` or run `naparia` from the command line. - -![](https://github.com/clEsperanto/napari_pyclesperanto_assistant/raw/master/docs/images/virtual_4d_support1.gif) - -## Usage - -### Start up the assistant -Start up napari, e.g. from the command line: -``` -napari -``` - -Load example data, e.g. from the menu `File > Open Samples > clEsperanto > CalibZAPWfixed` and -start the assistant from the menu `Tools > Utilities > Assistant (na)`. - -![](https://github.com/clEsperanto/napari_pyclesperanto_assistant/raw/master/docs/images/screenshot1.png) - -In case of two dimensional timelapse data, an initial conversion step might be necessary depending on your data source. -Click the menu `Tools > Utilities > Convert to 2d timelapse`. In the dialog, select the dataset and click ok. -You can delete the original dataset afterwards: +",text/markdown,https://github.com/pattonw/napari-pssr,William Patton,will.hunter.patton@gmail.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['numpy', 'zarr', 'magicgui', 'bioimageio.core', 'gunpowder', 'matplotlib', 'torch', 'napari']",>=3.7,"['Bug Tracker, https://github.com/pattonw/napari-pssr/issues', 'Documentation, https://github.com/pattonw/napari-pssr#README.md', 'Source Code, https://github.com/pattonw/napari-pssr', 'User Support, https://github.com/pattonw/napari-pssr/issues']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-pssr.lr_em,Load low res em for pssr,napari_pssr.sample_data:lr_em,napari-pssr.hr_em,Load high res em for pssr comparison,napari_pssr.sample_data:hr_em,napari-pssr.lr_large,Load low res em for large image,napari_pssr.sample_data:lr_large,napari-pssr.make_pssr_widget,PSSR Widget,False,,,,,,,,,,,,,,,,,,,,napari-pssr.lr_em,lr_em.0,8nm EM,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-pssr.hr_em,hr_em.0,2nm EM,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-pssr.lr_large,lr_em.1,large 8nm EM +308,napari-pyav,0.0.8,pyav video plugin,Napari plugin for reading videos using PyAV,jlab.berlin," +The MIT License (MIT) -![](https://github.com/clEsperanto/napari_pyclesperanto_assistant/raw/master/docs/images/screenshot1a.png) +Copyright (c) 2024 jlab.berlin -### Set up a workflow +Permission is hereby granted, free of charge, to any person obtaining a copy +of this software and associated documentation files (the ""Software""), to deal +in the Software without restriction, including without limitation the rights +to use, copy, modify, merge, publish, distribute, sublicense, and/or sell +copies of the Software, and to permit persons to whom the Software is +furnished to do so, subject to the following conditions: -Choose categories of operations in the top right panel, for example start with denoising using a Gaussian Blur with sigma 1 in x and y. +The above copyright notice and this permission notice shall be included in +all copies or substantial portions of the Software. -![](https://github.com/clEsperanto/napari_pyclesperanto_assistant/raw/master/docs/images/screenshot2.png) +THE SOFTWARE IS PROVIDED ""AS IS"", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR +IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, +FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE +AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER +LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, +OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN +THE SOFTWARE. +",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-pyav.get_reader,Open data with pyav video plugin,napari_pyav._reader:napari_get_reader,napari-pyav.get_reader,['*.mp4'],False,2.1,napari-pyav,0.0.8,,Napari plugin for reading videos using PyAV,"# napari-pyav -Continue with background removal using the top-hat filter with radius 5 in x and y. +[![License MIT](https://img.shields.io/pypi/l/napari-pyav.svg?color=green)](https://github.com/danionella/napari-pyav/raw/main/LICENSE) +[![PyPI](https://img.shields.io/pypi/v/napari-pyav.svg?color=green)](https://pypi.org/project/napari-pyav) +[![Python Version](https://img.shields.io/pypi/pyversions/napari-pyav.svg?color=green)](https://python.org) +[![tests](https://github.com/danionella/napari-pyav/workflows/tests/badge.svg)](https://github.com/danionella/napari-pyav/actions) +[![codecov](https://codecov.io/gh/danionella/napari-pyav/branch/main/graph/badge.svg)](https://codecov.io/gh/danionella/napari-pyav) +[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-pyav)](https://napari-hub.org/plugins/napari-pyav) -![](https://github.com/clEsperanto/napari_pyclesperanto_assistant/raw/master/docs/images/screenshot2a.png) +Napari plugin for reading videos using [PyAV](https://github.com/PyAV-Org/PyAV). Inspired by the [napari-video](https://github.com/janclemenslab/napari-video) project, which served us very well for many years. For some long videos, however, its dependency on opencv caused seek glitches, so we implemented this alternative plugin based on PyAV. -For labeling the objects, use [Voronoi-Otsu-Labeling](https://nbviewer.jupyter.org/github/clEsperanto/pyclesperanto_prototype/blob/master/demo/segmentation/voronoi_otsu_labeling.ipynb) with both sigma parameters set to 2. +---------------------------------- -![](https://github.com/clEsperanto/napari_pyclesperanto_assistant/raw/master/docs/images/screenshot2b.png) +This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template. -The labeled objects can be extended using a Voronoi diagram to derive a estimations of cell boundaries. + -You can then configure napari to show the label boundaries on top of the original image: +## Installation -![](https://github.com/clEsperanto/napari_pyclesperanto_assistant/raw/master/docs/images/screenshot2d.png) +You can install `napari-pyav` via [pip]: -When your workflow is set up, click the play button below your dataset: + pip install napari-pyav -![](https://github.com/clEsperanto/napari_pyclesperanto_assistant/raw/master/docs/images/timelapse_2d.gif) -### Neighbor statistics -When working with 2D or 3D data you can analyze measurements in relationship with their neighbors. -For example, you can measure the area of blobs as shown in the example shown below using the menu -`Tools > Measurements > Statistics of labeled pixels (clesperant)` and visualize it as `area` image by double-clicking on the table column (1). -Additionally, you can measure the maximum area of the 6 nearest neighbors using the menu `Tools > Measurments > Neighborhood statistics of measurements`. -The new column will then be called ""max_nn6_area..."" (2). When visualizing such parametric images next by each other, it is recommended to use -[napari-brightness-contrast](https://www.napari-hub.org/plugins/napari-brightness-contrast) and visualize the same intensity range to see differences correctly. +To install latest development version : -![](https://github.com/clEsperanto/napari_pyclesperanto_assistant/raw/master/docs/images/neighbor_statistics.png) + pip install git+https://github.com/danionella/napari-pyav.git -### Code generation -You can also export your workflow as Python/Jython code or as notebook. See the [napari-assistant documentation](https://www.napari-hub.org/plugins/napari-assistant) for details. -## Features -[pyclesperanto](https://github.com/clEsperanto/pyclesperanto_prototype) offers various possibilities for processing images. It comes from developers who work in life sciences and thus, it may be focused towards processing two- and three-dimensional microscopy image data showing cells and tissues. A selection of pyclesperanto's functionality is available via the assistant user interface. Typical workflows which can be built with this assistant include -* image filtering - * denoising / noise reduction (mean, median, Gaussian blur) - * background subtraction for uneven illumination or out-of-focus light (bottom-hat, top-hat, subtract Gaussian background) - * grey value morphology (local minimum, maximum. variance) - * gamma correction - * Laplace operator - * Sobel operator -* combining images - * masking - * image math (adding, subtracting, multiplying, dividing images) - * absolute / squared difference -* image transformations - * translation - * rotation - * scale - * reduce stack - * sub-stacks -* image projections - * minimum / mean / maximum / sum / standard deviation projections -* image segmentation - * binarization (thresholding, local maxima detection) - * labeling - * regionalization - * instance segmentation - * semantic segmentation - * detect label edges - * label spots - * connected component labeling - * Voronoi-Otsu-labeling -* post-processing of binary images - * dilation - * erosion - * binary opening - * binary closing - * binary and / or / xor -* post-processing of label images - * dilation (expansion) of labels - * extend labels via Voronoi - * exclude labels on edges - * exclude labels within / out of size / value range - * merge touching labels -* parametric maps - * proximal / touching neighbor count - * distance measurements to touching / proximal / n-nearest neighbors - * pixel count map - * mean / maximum / extension ratio map -* label measurements / post processing of parametric maps - * minimum / mean / maximum / standard deviation intensity maps - * minimum / mean / maximum / standard deviation of touching / n-nearest / neighbors -* neighbor meshes - * touching neighbors - * n-nearest neighbors - * proximal neighbors - * distance meshes -* measurements based on label images - * bounding box 2D / 3D - * minimum / mean / maximum / sum / standard deviation intensity - * center of mass - * centroid - * mean / maximum distance to centroid (and extension ratio shape descriptor) - * mean / maximum distance to center of mass (and extension ratio shape descriptor) - * statistics of neighbors (See related [publication](https://www.frontiersin.org/articles/10.3389/fcomp.2021.774396/full)) -* code export - * python / Fiji-compatible jython - * python jupyter notebooks -* pyclesperanto scripting - * cell segmentation - * cell counting - * cell differentiation - * tissue classification +## Contributing -## Installation +Contributions are very welcome. Tests can be run with [tox], please ensure +the coverage at least stays the same before you submit a pull request. -It is recommended to install the assistant using conda. If you have never used conda before, it is recommended to read -[this blog post](https://biapol.github.io/blog/johannes_mueller/anaconda_getting_started/) first. +## License -```shell -conda create --name cle_39 python=3.9 napari-pyclesperanto-assistant -conda activate cle_39 -``` +Distributed under the terms of the [MIT] license, +""napari-pyav"" is free and open source software -Mac-users please also install this: +## Issues - conda install -c conda-forge ocl_icd_wrapper_apple - -Linux users please also install this: - - conda install -c conda-forge ocl-icd-system +If you encounter any problems, please [file an issue] along with a detailed description. -You can then start the napari-assistant using this command: +[napari]: https://github.com/napari/napari +[Cookiecutter]: https://github.com/audreyr/cookiecutter +[@napari]: https://github.com/napari +[MIT]: http://opensource.org/licenses/MIT +[BSD-3]: http://opensource.org/licenses/BSD-3-Clause +[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt +[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt +[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0 +[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt +[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin -``` -naparia -``` +[file an issue]: https://github.com/danionella/napari-pyav/issues +[napari]: https://github.com/napari/napari +[tox]: https://tox.readthedocs.io/en/latest/ +[pip]: https://pypi.org/project/pip/ +[PyPI]: https://pypi.org/ +",text/markdown,,jlab.berlin,yourname@example.com," +The MIT License (MIT) -## Feedback and contributions welcome! -clEsperanto is developed in the open because we believe in the open source community. See our [community guidelines](https://clij.github.io/clij2-docs/community_guidelines). Feel free to drop feedback as [github issue](https://github.com/clEsperanto/pyclesperanto_prototype/issues) or via [image.sc](https://image.sc) +Copyright (c) 2024 jlab.berlin -## Acknowledgements -This project was supported by the Deutsche Forschungsgemeinschaft under Germany’s Excellence Strategy – EXC2068 - Cluster of Excellence ""Physics of Life"" of TU Dresden. -This project has been made possible in part by grant number [2021-240341 (Napari plugin accelerator grant)](https://chanzuckerberg.com/science/programs-resources/imaging/napari/improving-image-processing/) from the Chan Zuckerberg Initiative DAF, an advised fund of the Silicon Valley Community Foundation. +Permission is hereby granted, free of charge, to any person obtaining a copy +of this software and associated documentation files (the ""Software""), to deal +in the Software without restriction, including without limitation the rights +to use, copy, modify, merge, publish, distribute, sublicense, and/or sell +copies of the Software, and to permit persons to whom the Software is +furnished to do so, subject to the following conditions: -[Imprint](https://clesperanto.github.io/imprint) +The above copyright notice and this permission notice shall be included in +all copies or substantial portions of the Software. -",text/markdown,https://github.com/clesperanto/napari_pyclesperanto_assistant,"Robert Haase, Talley Lambert",robert.haase@tu-dresden.de,BSD-3-Clause,"['Programming Language :: Python :: 3', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Framework :: napari', 'Intended Audience :: Science/Research', 'Development Status :: 3 - Alpha']","['napari-plugin-engine (>=0.1.4)', 'pyopencl', 'toolz', 'scikit-image', 'napari (>=0.4.15)', 'pyclesperanto-prototype (>=0.22.0)', 'magicgui', 'numpy (!=1.19.4)', 'pyperclip', 'loguru', 'jupytext', 'jupyter', 'pandas', 'napari-tools-menu (>=0.1.8)', 'napari-time-slicer (>=0.4.0)', 'napari-skimage-regionprops (>=0.2.0)', 'napari-workflows (>=0.1.1)', 'napari-assistant (>=0.2.0)']",>=3.6,"['Bug Tracker, https://github.com/clEsperanto/napari_pyclesperanto_assistant/issues', 'Documentation, https://github.com/clEsperanto/napari_pyclesperanto_assistant/', 'Source Code, https://github.com/clEsperanto/napari_pyclesperanto_assistant', 'User Support, https://forum.image.sc/tag/clij']",,True,0.16.0,conda-forge/napari-pyclesperanto-assistant/0.16.0,0.17.1,conda-forge/napari-pyclesperanto-assistant/0.17.1,0.18.0,conda-forge/napari-pyclesperanto-assistant/0.18.0,conda,noarch/napari-pyclesperanto-assistant-0.16.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['jupyter', 'jupytext', 'loguru', 'magicgui', 'napari >=0.4.7', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-tools-menu >=0.1.8', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pandas', 'pyclesperanto-prototype >=0.12.0', 'pyopencl', 'pyperclip', 'python >=3.6', 'scikit-image', 'toolz', 'typing_extensions']",pyhd8ed1ab_0,1649080842976.0,None-any-None,noarch,2022-04-04 14:03:42.833000+00:00,29c0e66d3802cc2ce752db14cd00bfab,None,238453.0,conda-forge/napari-pyclesperanto-assistant/0.16.0/noarch/napari-pyclesperanto-assistant-0.16.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-pyclesperanto-assistant/0.16.0/noarch/napari-pyclesperanto-assistant-0.16.0-pyhd8ed1ab_0.tar.bz2,conda,0.16.0,conda-forge,['main'],conda,noarch/napari-pyclesperanto-assistant-0.17.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['jupyter', 'jupytext', 'loguru', 'magicgui', 'napari >=0.4.15', 'napari-assistant >=0.1.10', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-tools-menu >=0.1.8', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pandas', 'pyclesperanto-prototype >=0.17.1', 'pyopencl', 'pyperclip', 'python >=3.6', 'scikit-image', 'toolz', 'typing_extensions']",noarch,1651419638669.0,None-any-None,pyhd8ed1ab_0,2022-05-01 15:43:40.131000+00:00,b893556c9e587f2a3f52049b263f3f43,None,242034.0,conda-forge/napari-pyclesperanto-assistant/0.17.1/noarch/napari-pyclesperanto-assistant-0.17.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-pyclesperanto-assistant/0.17.1/noarch/napari-pyclesperanto-assistant-0.17.1-pyhd8ed1ab_0.tar.bz2,conda,0.17.1,conda-forge,['main'],conda,noarch/napari-pyclesperanto-assistant-0.18.0-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['jupyter', 'jupytext', 'loguru', 'magicgui', 'napari >=0.4.15', 'napari-assistant >=0.1.10', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-tools-menu >=0.1.8', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pandas', 'pyclesperanto-prototype >=0.17.1', 'pyopencl', 'pyperclip', 'python >=3.6', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,python,1652026775583.0,2022-05-08 16:22:27.198000+00:00,e735179b871e36054d1d538672d94fe9,None,242034.0,conda-forge/napari-pyclesperanto-assistant/0.18.0/noarch/napari-pyclesperanto-assistant-0.18.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-pyclesperanto-assistant/0.18.0/noarch/napari-pyclesperanto-assistant-0.18.0-pyhd8ed1ab_0.tar.bz2,conda,0.18.0,conda-forge,['main'],,napari-pyclesperanto-assistant._load_Lund,_load_Lund,napari_pyclesperanto_assistant._napari_plugin:_load_Lund,napari-pyclesperanto-assistant._load_Lund_timelapse,_load_Lund_timelapse,napari_pyclesperanto_assistant._napari_plugin:_load_Lund_timelapse,napari-pyclesperanto-assistant._load_CalibZAPWfixed,_load_CalibZAPWfixed,napari_pyclesperanto_assistant._napari_plugin:_load_CalibZAPWfixed,napari-pyclesperanto-assistant.Assistant,Assistant,False,napari-pyclesperanto-assistant.napari_experimental_provide_function,statistics_of_labeled_pixels,True,napari-pyclesperanto-assistant.napari_experimental_provide_function,advanced_statistics,True,napari-pyclesperanto-assistant.napari_experimental_provide_function,neighborhood_statistics,True,napari-pyclesperanto-assistant._load_Sonneberg,_load_Sonneberg,napari_pyclesperanto_assistant._napari_plugin:_load_Sonneberg,,,,,,,,napari-pyclesperanto-assistant._load_Lund,lund,Lund,0.18.3,conda-forge/napari-pyclesperanto-assistant/0.18.3,0.18.4,conda-forge/napari-pyclesperanto-assistant/0.18.4,0.19.0,conda-forge/napari-pyclesperanto-assistant/0.19.0,conda,noarch/napari-pyclesperanto-assistant-0.18.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['jupyter', 'jupytext', 'loguru', 'magicgui', 'napari >=0.4.15', 'napari-assistant >=0.1.10', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-tools-menu >=0.1.8', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pandas', 'pyclesperanto-prototype >=0.17.1', 'pyopencl', 'pyperclip', 'python >=3.6', 'scikit-image', 'toolz', 'typing_extensions']",noarch,1659591708778.0,None-any-None,pyhd8ed1ab_0,2022-08-04 05:44:07.119000+00:00,2cb3757b5313f030dc28ebb877c1e034,None,242603.0,conda-forge/napari-pyclesperanto-assistant/0.18.3/noarch/napari-pyclesperanto-assistant-0.18.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-pyclesperanto-assistant/0.18.3/noarch/napari-pyclesperanto-assistant-0.18.3-pyhd8ed1ab_0.tar.bz2,conda,0.18.3,conda-forge,['main'],conda,noarch/napari-pyclesperanto-assistant-0.18.4-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['jupyter', 'jupytext', 'loguru', 'magicgui', 'napari >=0.4.15', 'napari-assistant >=0.1.10', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-tools-menu >=0.1.8', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pandas', 'pyclesperanto-prototype >=0.17.1', 'pyopencl', 'pyperclip', 'python >=3.6', 'scikit-image', 'toolz', 'typing_extensions']",noarch,1662063482200.0,None-any-None,pyhd8ed1ab_0,2022-09-01 20:21:08.865000+00:00,6b544a640afa43a3606ae1fa90325023,None,243386.0,conda-forge/napari-pyclesperanto-assistant/0.18.4/noarch/napari-pyclesperanto-assistant-0.18.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-pyclesperanto-assistant/0.18.4/noarch/napari-pyclesperanto-assistant-0.18.4-pyhd8ed1ab_0.tar.bz2,conda,0.18.4,conda-forge,['main'],conda,noarch/napari-pyclesperanto-assistant-0.19.0-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['jupyter', 'jupytext', 'loguru', 'magicgui', 'napari >=0.4.15', 'napari-assistant >=0.1.10', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-tools-menu >=0.1.8', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pandas', 'pyclesperanto-prototype >=0.19.0', 'pyopencl', 'pyperclip', 'python >=3.6', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,python,1662974402224.0,2022-09-12 09:22:43.078000+00:00,11df6477097d6be0d3330cd2d2eff8e2,None,243391.0,conda-forge/napari-pyclesperanto-assistant/0.19.0/noarch/napari-pyclesperanto-assistant-0.19.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-pyclesperanto-assistant/0.19.0/noarch/napari-pyclesperanto-assistant-0.19.0-pyhd8ed1ab_0.tar.bz2,conda,0.19.0,conda-forge,['main'],napari-pyclesperanto-assistant._load_Lund_timelapse,lund_timelapse_100_mb,Lund timelapse (100 MB),napari-pyclesperanto-assistant._load_Haase_MRT_tfl3d1,_load_Haase_MRT_tfl3d1,napari_pyclesperanto_assistant._napari_plugin:_load_Haase_MRT_tfl3d1,0.20.0,conda-forge/napari-pyclesperanto-assistant/0.20.0,0.21.0,conda-forge/napari-pyclesperanto-assistant/0.21.0,conda,noarch/napari-pyclesperanto-assistant-0.20.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['jupyter', 'jupytext', 'loguru', 'magicgui', 'napari >=0.4.15', 'napari-assistant >=0.1.10', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-tools-menu >=0.1.8', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pandas', 'pyclesperanto-prototype >=0.19.0', 'pyopencl', 'pyperclip', 'python >=3.6', 'scikit-image', 'toolz', 'typing_extensions']",noarch,1664054186856.0,None-any-None,pyhd8ed1ab_0,2022-09-24 21:19:16.585000+00:00,c39abb3a0a88c68bddf1a271b5fa46d7,None,243691.0,conda-forge/napari-pyclesperanto-assistant/0.20.0/noarch/napari-pyclesperanto-assistant-0.20.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-pyclesperanto-assistant/0.20.0/noarch/napari-pyclesperanto-assistant-0.20.0-pyhd8ed1ab_0.tar.bz2,conda,0.20.0,conda-forge,['main'],conda,noarch/napari-pyclesperanto-assistant-0.21.0-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['jupyter', 'jupytext', 'loguru', 'magicgui', 'napari >=0.4.15', 'napari-assistant >=0.1.10', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-tools-menu >=0.1.8', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pandas', 'pyclesperanto-prototype >=0.19.0', 'pyopencl', 'pyperclip', 'python >=3.6', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,python,1666531983171.0,2022-10-23 13:35:49.182000+00:00,39a9bd9fa73d460467760157eecc999f,None,245378.0,conda-forge/napari-pyclesperanto-assistant/0.21.0/noarch/napari-pyclesperanto-assistant-0.21.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-pyclesperanto-assistant/0.21.0/noarch/napari-pyclesperanto-assistant-0.21.0-pyhd8ed1ab_0.tar.bz2,conda,0.21.0,conda-forge,['main'],napari-pyclesperanto-assistant._load_Pixel_cat,_load_Pixel_cat,napari_pyclesperanto_assistant._napari_plugin:_load_Pixel_cat,napari-pyclesperanto-assistant._load_perfect_tissue,_load_perfect_tissue,napari_pyclesperanto_assistant._napari_plugin:_load_perfect_tissue,napari-pyclesperanto-assistant._load_orderly_tissue,_load_orderly_tissue,napari_pyclesperanto_assistant._napari_plugin:_load_orderly_tissue,napari-pyclesperanto-assistant._load_chaotic_tissue,_load_chaotic_tissue,napari_pyclesperanto_assistant._napari_plugin:_load_chaotic_tissue,napari-pyclesperanto-assistant.napari_experimental_provide_function,statistics_of_labeled_pixels,napari_pyclesperanto_assistant._statistics_of_labeled_pixels:statistics_of_labeled_pixels,napari-pyclesperanto-assistant.napari_experimental_provide_function,advanced_statistics,napari_pyclesperanto_assistant._advanced_statistics:advanced_statistics,,napari-pyclesperanto-assistant.napari_experimental_provide_function,make_labels_editable,True,napari-pyclesperanto-assistant.napari_experimental_provide_function,auto_brightness_contrast,True,napari-pyclesperanto-assistant.napari_experimental_provide_function,auto_brightness_contrast_all_images,True,napari-pyclesperanto-assistant.napari_experimental_provide_function,reset_brightness_contrast,True,conda,noarch/napari-pyclesperanto-assistant-0.21.1-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['jupyter', 'jupytext', 'loguru', 'magicgui', 'napari >=0.4.15', 'napari-assistant >=0.1.10', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-tools-menu >=0.1.8', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pandas', 'pyclesperanto-prototype >=0.19.0', 'pyopencl', 'pyperclip', 'python >=3.6', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,python,1671910716136.0,2022-12-24 19:41:03.288000+00:00,2dbbf0259760e5afc9e34fef640d2582,ded6bd74d5ba977d09a391e3755385e848c791eb84ef1c5e6a7a34374594058f,237849.0,conda-forge/napari-pyclesperanto-assistant/0.21.1/noarch/napari-pyclesperanto-assistant-0.21.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-pyclesperanto-assistant/0.21.1/noarch/napari-pyclesperanto-assistant-0.21.1-pyhd8ed1ab_0.conda,conda,0.21.1,conda-forge,['main'],0.21.1,conda-forge/napari-pyclesperanto-assistant/0.21.1,conda,noarch/napari-pyclesperanto-assistant-0.21.2-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['jupyter', 'jupytext', 'loguru', 'magicgui', 'napari >=0.4.15', 'napari-assistant >=0.1.10', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-tools-menu >=0.1.8', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pandas', 'pyclesperanto-prototype >=0.21.1', 'pyopencl', 'pyperclip', 'python >=3.6', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,1672134850619.0,2022-12-27 09:56:20.477000+00:00,28bd258e4ce5d01e645bda1c70f79c11,31b8953c056280bf6f5499277fd48b50d5ecad1e3aeb1eb1b566daa6b3357756,237488.0,conda-forge/napari-pyclesperanto-assistant/0.21.2/noarch/napari-pyclesperanto-assistant-0.21.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-pyclesperanto-assistant/0.21.2/noarch/napari-pyclesperanto-assistant-0.21.2-pyhd8ed1ab_0.conda,conda,0.21.2,conda-forge,['main'],conda,noarch/napari-pyclesperanto-assistant-0.22.0-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['jupyter', 'jupytext', 'loguru', 'magicgui', 'napari >=0.4.15', 'napari-assistant >=0.1.10', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-tools-menu >=0.1.8', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pandas', 'pyclesperanto-prototype >=0.21.1', 'pyopencl', 'pyperclip', 'python >=3.6', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,1674034512936.0,2023-01-18 09:37:34.550000+00:00,381a18e1553c61c3d19882dac47bf9d6,a9c3e1724c23dbd8bd56e552077a25b60f269078fcf5cf6d4fceca29bddd2118,237475.0,conda-forge/napari-pyclesperanto-assistant/0.22.0/noarch/napari-pyclesperanto-assistant-0.22.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-pyclesperanto-assistant/0.22.0/noarch/napari-pyclesperanto-assistant-0.22.0-pyhd8ed1ab_0.conda,conda,0.22.0,conda-forge,['main'],conda,noarch/napari-pyclesperanto-assistant-0.22.1-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['jupyter', 'jupytext', 'loguru', 'magicgui', 'napari >=0.4.15', 'napari-assistant >=0.1.10', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-tools-menu >=0.1.8', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pandas', 'pyclesperanto-prototype >=0.21.1', 'pyopencl', 'pyperclip', 'python >=3.6', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,1676124148284.0,2023-02-11 14:04:13.063000+00:00,09308bbe7e744bbdc65f967e7826c2d9,cb713e547e861530e04cfcb537dfc4561b94cb5eb5b0ea661d994c241cd341a5,237553.0,conda-forge/napari-pyclesperanto-assistant/0.22.1/noarch/napari-pyclesperanto-assistant-0.22.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-pyclesperanto-assistant/0.22.1/noarch/napari-pyclesperanto-assistant-0.22.1-pyhd8ed1ab_0.conda,conda,0.22.1,conda-forge,['main'],napari-pyclesperanto-assistant._load_CalibZAPWfixed,calibzapwfixed,CalibZAPWfixed -296,napari-pymeshlab,0.0.6,napari pymeshlab,"Interfaces between napari and pymeshlab library to allow import, export and construction of surfaces.","Zach Marin, Robert Haase",MIT,https://github.com/zacsimile/napari-pymeshlab,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-pymeshlab.get_mesh_reader,Use pymeshlab to load meshes as surfaces,napari_pymeshlab._reader:get_mesh_reader,napari-pymeshlab.get_mesh_reader,"['*.3ds', '*.apts', '*.asc', '*.bre', '*.ctm', '*.dae', '*.e57', '*.es', '*.fbx', '*.glb', '*.gltf', '*.obj', '*.off', '*.pdb', '*.ply', '*.ptx', '*.qobj', '*.stl', '*.vmi', '*.wrl', '*.x3d', '.x3dv']",False,2.1,napari-pymeshlab,0.0.6,,"Interfaces between napari and pymeshlab library to allow import, export and construction of surfaces.","# napari-pymeshlab +THE SOFTWARE IS PROVIDED ""AS IS"", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR +IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, +FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE +AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER +LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, +OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN +THE SOFTWARE. +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'av', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""']",>=3.9,"['Homepage, https://github.com/danionella/napari-pyav', 'Bug Tracker, https://github.com/danionella/napari-pyav/issues', 'Documentation, https://github.com/danionella/napari-pyav#README.md', 'Source Code, https://github.com/danionella/napari-pyav', 'User Support, https://github.com/danionella/napari-pyav/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +309,napari-pymeshlab,0.0.6,napari pymeshlab,"Interfaces between napari and pymeshlab library to allow import, export and construction of surfaces.","Zach Marin, Robert Haase",MIT,https://github.com/zacsimile/napari-pymeshlab,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-pymeshlab.get_mesh_reader,Use pymeshlab to load meshes as surfaces,napari_pymeshlab._reader:get_mesh_reader,napari-pymeshlab.get_mesh_reader,"['*.3ds', '*.apts', '*.asc', '*.bre', '*.ctm', '*.dae', '*.e57', '*.es', '*.fbx', '*.glb', '*.gltf', '*.obj', '*.off', '*.pdb', '*.ply', '*.ptx', '*.qobj', '*.stl', '*.vmi', '*.wrl', '*.x3d', '.x3dv']",False,2.1,napari-pymeshlab,0.0.6,,"Interfaces between napari and pymeshlab library to allow import, export and construction of surfaces.","# napari-pymeshlab [![License](https://img.shields.io/pypi/l/napari-pymeshlab.svg?color=green)](https://github.com/zacsimile/napari-pymeshlab/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-pymeshlab.svg?color=green)](https://pypi.org/project/napari-pymeshlab) @@ -30982,8 +32245,8 @@ If you encounter any problems, please [file an issue](https://github.com/zacsimi [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/zacsimile/napari-pymeshlab,"Zach Marin, Robert Haase",zach.marin@yale.edu,MIT,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']","['napari', 'npe2', 'numpy', 'pymeshlab']",>=3.8,"['Bug Tracker, https://github.com/zacsimile/napari-pymeshlab/issues', 'Documentation, https://github.com/zacsimile/napari-pymeshlab#README.md', 'Source Code, https://github.com/zacsimile/napari-pymeshlab', 'User Support, https://github.com/zacsimile/napari-pymeshlab/issues']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-pymeshlab.write_single_surface,Save surface data,napari_pymeshlab._writer:write_single_surface,napari-pymeshlab.make_sphere,Load sample sphere mesh,napari_pymeshlab._sample_data:make_sphere,napari-pymeshlab.make_shell,Load sample points on a shell,napari_pymeshlab._sample_data:make_shell,napari-pymeshlab.screened_poisson_reconstruction,Screened Poisson Reconstruction,False,,,,,,,,,,napari-pymeshlab.make_bunny,Load sample points representing Stanford bunny,napari_pymeshlab._sample_data:make_bunny,napari-pymeshlab.write_single_surface,['surface'],,,,,,napari-pymeshlab.make_sphere,sphere,sphere,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-pymeshlab.make_shell,shell,shell,napari-pymeshlab.screened_poisson_reconstruction,Perform Screened Poisson Reconstruction on a point cloud,napari_pymeshlab._widget:screened_poisson_reconstruction,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-pymeshlab._convex_hull,Convex hull of surface,napari_pymeshlab._widget:_convex_hull,napari-pymeshlab._laplacian_smooth,Laplacian smoothing of a surface,napari_pymeshlab._widget:_laplacian_smooth,napari-pymeshlab._taubin_smooth,Taubin smoothing of a surface,napari_pymeshlab._widget:_taubin_smooth,napari-pymeshlab._simplification_clustering_decimation,Simplification of a surface using clustering decimation,napari_pymeshlab._widget:_simplification_clustering_decimation,napari-pymeshlab._colorize_curvature_apss,Colorize curvature (apss),napari_pymeshlab._widget:_colorize_curvature_apss,,,,"['.3ds', '.apts', '.asc', '.bre', '.ctm', '.dae', '.e57', '.es', '.fbx', '.glb', '.gltf', '.obj', '.off', '.pdb', '.ply', '.ptx', '.qobj', '.stl', '.vmi', '.wrl', '.x3d', '.x3dv']",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-pymeshlab.make_bunny,bunny,bunny -297,napari-pystackreg,0.1.4,napari pystackreg,Robust image registration for napari,Gregor Lichtner,Apache-2.0,https://github.com/glichtner/napari-pystackreg,62d538c8c16bacc5218bc55d,['conda'],,https://github.com/glichtner/napari-pystackreg,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-pystackreg,http://api.anaconda.org/packages/conda-forge/napari-pystackreg,http://anaconda.org/conda-forge/napari-pystackreg,"['0.1.1', '0.1.3', '0.1.4']",0.1.4,0.1.4,['noarch'],5.0,,['pyhd8ed1ab_0'],0.1.1,conda-forge/napari-pystackreg/0.1.1,1.0,0.0,2022-07-18 10:41:10.756000+00:00,2023-06-18 08:42:06.352000+00:00,conda,noarch/napari-pystackreg-0.1.1-pyhd8ed1ab_0.tar.bz2,0.0,Apache-2.0,False,python,"['magicgui', 'napari', 'numpy', 'pystackreg >=0.2.6', 'python >=3.8', 'qtpy']",noarch,1658140742788.0,None-any-None,pyhd8ed1ab_0,2022-07-18 10:41:11.067000+00:00,f7442e3cb1edd4f2d1fd1637fb5e76c0,None,18510.0,conda-forge/napari-pystackreg/0.1.1/noarch/napari-pystackreg-0.1.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-pystackreg/0.1.1/noarch/napari-pystackreg-0.1.1-pyhd8ed1ab_0.tar.bz2,conda,0.1.1,conda-forge,['main'],public,,0.2.1,napari-pystackreg.pystackreg,pystackreg,napari_pystackreg._widget:PystackregWidget,,,,2.1,napari-pystackreg,0.1.4,,Robust image registration for napari,"# napari-pystackreg +",text/markdown,https://github.com/zacsimile/napari-pymeshlab,"Zach Marin, Robert Haase",zach.marin@yale.edu,MIT,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']","['napari', 'npe2', 'numpy', 'pymeshlab']",>=3.8,"['Bug Tracker, https://github.com/zacsimile/napari-pymeshlab/issues', 'Documentation, https://github.com/zacsimile/napari-pymeshlab#README.md', 'Source Code, https://github.com/zacsimile/napari-pymeshlab', 'User Support, https://github.com/zacsimile/napari-pymeshlab/issues']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-pymeshlab.write_single_surface,Save surface data,napari_pymeshlab._writer:write_single_surface,napari-pymeshlab.make_sphere,Load sample sphere mesh,napari_pymeshlab._sample_data:make_sphere,napari-pymeshlab.make_shell,Load sample points on a shell,napari_pymeshlab._sample_data:make_shell,napari-pymeshlab.screened_poisson_reconstruction,Screened Poisson Reconstruction,False,,,,,,,,,,napari-pymeshlab.make_bunny,Load sample points representing Stanford bunny,napari_pymeshlab._sample_data:make_bunny,napari-pymeshlab.write_single_surface,['surface'],,,,,,napari-pymeshlab.make_sphere,sphere,sphere,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-pymeshlab.make_shell,shell,shell,napari-pymeshlab.screened_poisson_reconstruction,Perform Screened Poisson Reconstruction on a point cloud,napari_pymeshlab._widget:screened_poisson_reconstruction,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-pymeshlab._convex_hull,Convex hull of surface,napari_pymeshlab._widget:_convex_hull,napari-pymeshlab._laplacian_smooth,Laplacian smoothing of a surface,napari_pymeshlab._widget:_laplacian_smooth,napari-pymeshlab._taubin_smooth,Taubin smoothing of a surface,napari_pymeshlab._widget:_taubin_smooth,napari-pymeshlab._simplification_clustering_decimation,Simplification of a surface using clustering decimation,napari_pymeshlab._widget:_simplification_clustering_decimation,napari-pymeshlab._colorize_curvature_apss,Colorize curvature (apss),napari_pymeshlab._widget:_colorize_curvature_apss,"['.3ds', '.apts', '.asc', '.bre', '.ctm', '.dae', '.e57', '.es', '.fbx', '.glb', '.gltf', '.obj', '.off', '.pdb', '.ply', '.ptx', '.qobj', '.stl', '.vmi', '.wrl', '.x3d', '.x3dv']",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-pymeshlab.make_bunny,bunny,bunny +310,napari-pystackreg,0.1.4,napari pystackreg,Robust image registration for napari,Gregor Lichtner,Apache-2.0,https://github.com/glichtner/napari-pystackreg,62d538c8c16bacc5218bc55d,['conda'],,https://github.com/glichtner/napari-pystackreg,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-pystackreg,http://api.anaconda.org/packages/conda-forge/napari-pystackreg,http://anaconda.org/conda-forge/napari-pystackreg,"['0.1.1', '0.1.3', '0.1.4']",0.1.4,0.1.4,['noarch'],5.0,,['pyhd8ed1ab_0'],0.1.1,conda-forge/napari-pystackreg/0.1.1,1.0,0.0,2022-07-18 10:41:10.756000+00:00,2023-06-18 08:42:06.352000+00:00,conda,noarch/napari-pystackreg-0.1.1-pyhd8ed1ab_0.tar.bz2,0.0,Apache-2.0,False,python,"['magicgui', 'napari', 'numpy', 'pystackreg >=0.2.6', 'python >=3.8', 'qtpy']",noarch,1658140742788.0,None-any-None,pyhd8ed1ab_0,2022-07-18 10:41:11.067000+00:00,f7442e3cb1edd4f2d1fd1637fb5e76c0,None,18510.0,conda-forge/napari-pystackreg/0.1.1/noarch/napari-pystackreg-0.1.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-pystackreg/0.1.1/noarch/napari-pystackreg-0.1.1-pyhd8ed1ab_0.tar.bz2,conda,0.1.1,conda-forge,['main'],public,,0.2.1,napari-pystackreg.pystackreg,pystackreg,napari_pystackreg._widget:PystackregWidget,,,,2.1,napari-pystackreg,0.1.4,,Robust image registration for napari,"# napari-pystackreg [![License](https://img.shields.io/pypi/l/napari-pystackreg.svg?color=green)](https://github.com/glichtner/napari-pystackreg/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-pystackreg.svg?color=green)](https://pypi.org/project/napari-pystackreg) @@ -31166,8 +32429,8 @@ This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookie [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/glichtner/napari-pystackreg,Gregor Lichtner,gregor.lichtner@med.uni-greifswald.de,Apache-2.0,"['Development Status :: 4 - Beta', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['magicgui', 'numpy', 'pystackreg (>=0.2.6)', 'qtpy', ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/glichtner/napari-pystackreg/issues', 'Documentation, https://github.com/glichtner/napari-pystackreg#README.md', 'Source Code, https://github.com/glichtner/napari-pystackreg', 'User Support, https://github.com/glichtner/napari-pystackreg/issues']",['testing'],False,0.1.3,conda-forge/napari-pystackreg/0.1.3,0.1.4,conda-forge/napari-pystackreg/0.1.4,,,conda,noarch/napari-pystackreg-0.1.3-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['magicgui', 'napari', 'numpy', 'pystackreg >=0.2.6', 'python >=3.8', 'qtpy']",pyhd8ed1ab_0,1669640641793.0,None-any-None,noarch,2022-11-28 13:06:30.239000+00:00,6c3f685a43cd69679668837d8a8f1ba0,7540f809bfa30daa110a2875efa62fef77e15ff2ec017c0f7823ec1b327f8fd0,21451.0,conda-forge/napari-pystackreg/0.1.3/noarch/napari-pystackreg-0.1.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-pystackreg/0.1.3/noarch/napari-pystackreg-0.1.3-pyhd8ed1ab_0.conda,conda,0.1.3,conda-forge,['main'],conda,noarch/napari-pystackreg-0.1.4-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['magicgui', 'napari', 'numpy', 'pystackreg >=0.2.6', 'python >=3.8', 'qtpy', 'scikit-image']",noarch,1673988669668.0,None-any-None,pyhd8ed1ab_0,2023-01-17 20:52:53.147000+00:00,c9d3d3b3bc141d8df703a8a24ae185b8,25daa23fc30863192278ad448517751360929997a59583aa50fa104b2e5d8601,22077.0,conda-forge/napari-pystackreg/0.1.4/noarch/napari-pystackreg-0.1.4-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-pystackreg/0.1.4/noarch/napari-pystackreg-0.1.4-pyhd8ed1ab_0.conda,conda,0.1.4,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,napari-pystackreg.load_sample_data,Load PC12 cell example,napari_pystackreg._sample_data:load_sample_data,,,,,,,napari-pystackreg.pystackreg,pystackreg,False,,,,,,,,,,,,,,,,,,,,napari-pystackreg.load_sample_data,pc12,PC12 moving example,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -298,napari-qrcode,0.0.1,QR-Code,A napari plugin to generate QR-Codes,Kyle Harrington,BSD-3-Clause,https://github.com/kephale/napari-qrcode,6425be78d5bbf4f9e8104ccd,['conda'],,https://github.com/kephale/napari-qrcode,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-qrcode,http://api.anaconda.org/packages/conda-forge/napari-qrcode,http://anaconda.org/conda-forge/napari-qrcode,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-qrcode/0.0.1,1.0,0.0,2023-03-30 16:53:10.104000+00:00,2023-06-18 17:27:55.964000+00:00,conda,noarch/napari-qrcode-0.0.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'numpy', 'python >=3.8', 'qrcode', 'qtpy']",noarch,1680195138809.0,None-any-None,pyhd8ed1ab_0,2023-03-30 16:53:10.723000+00:00,68b6d73cdf064733bed449f4250d33ee,91f8732080080b765dcef7c6e1af1d91d3d9d4ab6273c784c8946a4d51239199,10951.0,conda-forge/napari-qrcode/0.0.1/noarch/napari-qrcode-0.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-qrcode/0.0.1/noarch/napari-qrcode-0.0.1-pyhd8ed1ab_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-qrcode.qrcode_widget,QR-Code,napari_qrcode._widget:qrcode_widget,,,,2.1,napari-qrcode,0.0.1,,A napari plugin to generate QR-Codes,"# napari-qrcode +",text/markdown,https://github.com/glichtner/napari-pystackreg,Gregor Lichtner,gregor.lichtner@med.uni-greifswald.de,Apache-2.0,"['Development Status :: 4 - Beta', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['magicgui', 'numpy', 'pystackreg (>=0.2.6)', 'qtpy', ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/glichtner/napari-pystackreg/issues', 'Documentation, https://github.com/glichtner/napari-pystackreg#README.md', 'Source Code, https://github.com/glichtner/napari-pystackreg', 'User Support, https://github.com/glichtner/napari-pystackreg/issues']",['testing'],False,0.1.3,conda-forge/napari-pystackreg/0.1.3,0.1.4,conda-forge/napari-pystackreg/0.1.4,,,conda,noarch/napari-pystackreg-0.1.3-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['magicgui', 'napari', 'numpy', 'pystackreg >=0.2.6', 'python >=3.8', 'qtpy']",pyhd8ed1ab_0,1669640641793.0,None-any-None,noarch,2022-11-28 13:06:30.239000+00:00,6c3f685a43cd69679668837d8a8f1ba0,7540f809bfa30daa110a2875efa62fef77e15ff2ec017c0f7823ec1b327f8fd0,21451.0,conda-forge/napari-pystackreg/0.1.3/noarch/napari-pystackreg-0.1.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-pystackreg/0.1.3/noarch/napari-pystackreg-0.1.3-pyhd8ed1ab_0.conda,conda,0.1.3,conda-forge,['main'],conda,noarch/napari-pystackreg-0.1.4-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['magicgui', 'napari', 'numpy', 'pystackreg >=0.2.6', 'python >=3.8', 'qtpy', 'scikit-image']",noarch,1673988669668.0,None-any-None,pyhd8ed1ab_0,2023-01-17 20:52:53.147000+00:00,c9d3d3b3bc141d8df703a8a24ae185b8,25daa23fc30863192278ad448517751360929997a59583aa50fa104b2e5d8601,22077.0,conda-forge/napari-pystackreg/0.1.4/noarch/napari-pystackreg-0.1.4-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-pystackreg/0.1.4/noarch/napari-pystackreg-0.1.4-pyhd8ed1ab_0.conda,conda,0.1.4,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,napari-pystackreg.load_sample_data,Load PC12 cell example,napari_pystackreg._sample_data:load_sample_data,,,,,,,napari-pystackreg.pystackreg,pystackreg,False,,,,,,,,,,,,,,,,,,,,napari-pystackreg.load_sample_data,pc12,PC12 moving example,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +311,napari-qrcode,0.0.1,QR-Code,A napari plugin to generate QR-Codes,Kyle Harrington,BSD-3-Clause,https://github.com/kephale/napari-qrcode,6425be78d5bbf4f9e8104ccd,['conda'],,https://github.com/kephale/napari-qrcode,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-qrcode,http://api.anaconda.org/packages/conda-forge/napari-qrcode,http://anaconda.org/conda-forge/napari-qrcode,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-qrcode/0.0.1,1.0,0.0,2023-03-30 16:53:10.104000+00:00,2023-06-18 17:27:55.964000+00:00,conda,noarch/napari-qrcode-0.0.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'numpy', 'python >=3.8', 'qrcode', 'qtpy']",noarch,1680195138809.0,None-any-None,pyhd8ed1ab_0,2023-03-30 16:53:10.723000+00:00,68b6d73cdf064733bed449f4250d33ee,91f8732080080b765dcef7c6e1af1d91d3d9d4ab6273c784c8946a4d51239199,10951.0,conda-forge/napari-qrcode/0.0.1/noarch/napari-qrcode-0.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-qrcode/0.0.1/noarch/napari-qrcode-0.0.1-pyhd8ed1ab_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-qrcode.qrcode_widget,QR-Code,napari_qrcode._widget:qrcode_widget,,,,2.1,napari-qrcode,0.0.1,,A napari plugin to generate QR-Codes,"# napari-qrcode [![License BSD-3](https://img.shields.io/pypi/l/napari-qrcode.svg?color=green)](https://github.com/kephale/napari-qrcode/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-qrcode.svg?color=green)](https://pypi.org/project/napari-qrcode) @@ -31234,8 +32497,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/kephale/napari-qrcode,Kyle Harrington,czi@kyleharrington.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'qrcode', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/kephale/napari-qrcode/issues', 'Documentation, https://github.com/kephale/napari-qrcode#README.md', 'Source Code, https://github.com/kephale/napari-qrcode', 'User Support, https://github.com/kephale/napari-qrcode/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-qrcode.qrcode_widget,Generate a QR code,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -299,napari-quoll,0.0.1,napari Quoll,Resolution estimation for electron tomography,Elaine Ho,Apache-2.0,https://github.com/rosalindfranklininstitute/napari-quoll,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-quoll.make_quoll_widget,Make Quoll widget,napari_quoll._widget:quoll_oneimgfrc,,,,2.1,napari-quoll,0.0.1,,Resolution estimation for electron tomography,"# napari-quoll +",text/markdown,https://github.com/kephale/napari-qrcode,Kyle Harrington,czi@kyleharrington.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'qrcode', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/kephale/napari-qrcode/issues', 'Documentation, https://github.com/kephale/napari-qrcode#README.md', 'Source Code, https://github.com/kephale/napari-qrcode', 'User Support, https://github.com/kephale/napari-qrcode/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-qrcode.qrcode_widget,Generate a QR code,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +312,napari-quoll,0.0.1,napari Quoll,Resolution estimation for electron tomography,Elaine Ho,Apache-2.0,https://github.com/rosalindfranklininstitute/napari-quoll,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-quoll.make_quoll_widget,Make Quoll widget,napari_quoll._widget:quoll_oneimgfrc,,,,2.1,napari-quoll,0.0.1,,Resolution estimation for electron tomography,"# napari-quoll [![License](https://img.shields.io/badge/License-Apache_2.0-green.svg)](https://opensource.org/licenses/Apache-2.0) [![PyPI](https://img.shields.io/pypi/v/napari-quoll.svg?color=green)](https://pypi.org/project/napari-quoll) @@ -31308,8 +32571,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/rosalindfranklininstitute/napari-quoll,Elaine Ho,Elaine.Ho@rfi.ac.uk,Apache-2.0,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'quoll', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.7,"['Bug Tracker, https://github.com/rosalindfranklininstitute/napari-quoll/issues', 'Documentation, https://github.com/rosalindfranklininstitute/napari-quoll#README.md', 'Source Code, https://github.com/rosalindfranklininstitute/napari-quoll', 'User Support, https://github.com/rosalindfranklininstitute/napari-quoll/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-quoll.make_quoll_widget,Quoll,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -300,napari-rembg,0.0.7,Napari Select Foreground,AI-based foreground extraction in scientific and natural images.,Mallory Wittwer,BSD-3-Clause,https://github.com/EPFL-Center-for-Imaging/napari-rembg.git,6559416c456c1b6580a48fa1,['conda'],,https://pypi.org/project/napari-rembg,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-rembg,http://api.anaconda.org/packages/conda-forge/napari-rembg,http://anaconda.org/conda-forge/napari-rembg,"['0.0.3', '0.0.5', '0.0.7']",0.0.7,0.0.7,['noarch'],9.0,https://github.com/MalloryWittwer/napari-rembg,['pyh9208f05_0'],0.0.3,conda-forge/napari-rembg/0.0.3,1.0,0.0,2023-11-18 22:57:46.086000+00:00,2024-07-11 10:09:47.510000+00:00,conda,noarch/napari-rembg-0.0.3-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari >=0.4.16', 'python >=3.8', 'qtpy', 'rembg']",noarch,1700348023357.0,None-any-None,pyh9208f05_0,2023-11-18 22:57:46.454000+00:00,db413cda91c20b8c59f1ef0b3a21b812,01a902e75b249af0480519cbca0565fb747be7bdd4ca110d40784c82c6f51bd1,11484.0,conda-forge/napari-rembg/0.0.3/noarch/napari-rembg-0.0.3-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-rembg/0.0.3/noarch/napari-rembg-0.0.3-pyh9208f05_0.conda,conda,0.0.3,conda-forge,['main'],public,,0.2.1,napari-rembg.local,Select foreground,napari_rembg:LocalPredictorWidget,,,,2.1,napari-rembg,0.0.7,,AI-based foreground extraction in scientific and natural images.,"![EPFL Center for Imaging logo](https://imaging.epfl.ch/resources/logo-for-gitlab.svg) +",text/markdown,https://github.com/rosalindfranklininstitute/napari-quoll,Elaine Ho,Elaine.Ho@rfi.ac.uk,Apache-2.0,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'quoll', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.7,"['Bug Tracker, https://github.com/rosalindfranklininstitute/napari-quoll/issues', 'Documentation, https://github.com/rosalindfranklininstitute/napari-quoll#README.md', 'Source Code, https://github.com/rosalindfranklininstitute/napari-quoll', 'User Support, https://github.com/rosalindfranklininstitute/napari-quoll/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-quoll.make_quoll_widget,Quoll,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +313,napari-rembg,0.0.7,Napari Select Foreground,AI-based foreground extraction in scientific and natural images.,Mallory Wittwer,BSD-3-Clause,https://github.com/EPFL-Center-for-Imaging/napari-rembg.git,6559416c456c1b6580a48fa1,['conda'],,https://pypi.org/project/napari-rembg,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-rembg,http://api.anaconda.org/packages/conda-forge/napari-rembg,http://anaconda.org/conda-forge/napari-rembg,"['0.0.3', '0.0.5', '0.0.7']",0.0.7,0.0.7,['noarch'],9.0,https://github.com/MalloryWittwer/napari-rembg,['pyh9208f05_0'],0.0.3,conda-forge/napari-rembg/0.0.3,1.0,0.0,2023-11-18 22:57:46.086000+00:00,2024-07-11 10:09:47.510000+00:00,conda,noarch/napari-rembg-0.0.3-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari >=0.4.16', 'python >=3.8', 'qtpy', 'rembg']",noarch,1700348023357.0,None-any-None,pyh9208f05_0,2023-11-18 22:57:46.454000+00:00,db413cda91c20b8c59f1ef0b3a21b812,01a902e75b249af0480519cbca0565fb747be7bdd4ca110d40784c82c6f51bd1,11484.0,conda-forge/napari-rembg/0.0.3/noarch/napari-rembg-0.0.3-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-rembg/0.0.3/noarch/napari-rembg-0.0.3-pyh9208f05_0.conda,conda,0.0.3,conda-forge,['main'],public,,0.2.1,napari-rembg.local,Select foreground,napari_rembg:LocalPredictorWidget,,,,2.1,napari-rembg,0.0.7,,AI-based foreground extraction in scientific and natural images.,"![EPFL Center for Imaging logo](https://imaging.epfl.ch/resources/logo-for-gitlab.svg) # napari-rembg Segment images using a collection of fast and lightweight generalist segmentation models in Napari. This plugin is based on the [rembg](https://github.com/danielgatis/rembg) project. @@ -31418,8 +32681,8 @@ If you encounter any problems, please file an issue along with a detailed descri ---------------------------------- This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template. -",text/markdown,https://github.com/EPFL-Center-for-Imaging/napari-rembg.git,Mallory Wittwer,mallory.wittwer@epfl.ch,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['magicgui', 'qtpy', 'napari[all] >=0.4.16', ""rembg ; extra == 'local'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Source Code, https://github.com/EPFL-Center-for-Imaging/napari-rembg.git']","['local', 'testing']",False,0.0.5,conda-forge/napari-rembg/0.0.5,0.0.7,conda-forge/napari-rembg/0.0.7,,,conda,noarch/napari-rembg-0.0.5-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari >=0.4.16', 'numpy', 'pillow', 'python >=3.8', 'qtpy', 'rembg', 'scikit-image']",pyh9208f05_0,1700689088008.0,None-any-None,noarch,2023-11-22 21:41:45+00:00,05a379f6143e371a586a004f5aa00c8b,b2463ed98a7431f947f860f37c7f491f52ccfa9a4f0402d9d3f9a0b02619d13f,13529.0,conda-forge/napari-rembg/0.0.5/noarch/napari-rembg-0.0.5-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-rembg/0.0.5/noarch/napari-rembg-0.0.5-pyh9208f05_0.conda,conda,0.0.5,conda-forge,['main'],conda,noarch/napari-rembg-0.0.7-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari >=0.4.16', 'numpy', 'pillow', 'python >=3.8', 'qtpy', 'rembg', 'requests', 'scikit-image']",noarch,1720692370632.0,None-any-None,pyh9208f05_0,2024-07-11 10:09:42.766000+00:00,5dbf640920c43b4d3ab1b8715189b0da,a04f428e4600a2afefdf3066689820c6b26392db2357f062a50cfad0c3031b26,15932.0,conda-forge/napari-rembg/0.0.7/noarch/napari-rembg-0.0.7-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-rembg/0.0.7/noarch/napari-rembg-0.0.7-pyh9208f05_0.conda,conda,0.0.7,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,napari-rembg.remote,Select foreground (Web API),napari_rembg:RemotePredictorWidget,,,,,,,napari-rembg.local,Select foreground,False,napari-rembg.remote,Select foreground (Web API),False,,,,,,,,,,,,,,,,,,napari,Tabueran Kiribati,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -301,napari-result-stack,0.0.1,Result stack,Widgets and type annotations for storing function results of any types,Hanjin Liu,BSD-3-Clause,https://github.com/hanjinliu/napari-result-stack,642c6e1a62088ab446d3f0cc,['conda'],,https://github.com/hanjinliu/napari-result-stack,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-result-stack,http://api.anaconda.org/packages/conda-forge/napari-result-stack,http://anaconda.org/conda-forge/napari-result-stack,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-result-stack/0.0.1,1.0,0.0,2023-04-04 18:36:07.372000+00:00,2023-06-18 17:27:57.331000+00:00,conda,noarch/napari-result-stack-0.0.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy']",noarch,1680633223028.0,None-any-None,pyhd8ed1ab_0,2023-04-04 18:36:07.964000+00:00,1b683d3112aa3d2f7b40b40bd1d032ae,b8091a1815b9be33c119c1902fb9888b101a311d4a34500b39f8bff6ad982f63,24030.0,conda-forge/napari-result-stack/0.0.1/noarch/napari-result-stack-0.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-result-stack/0.0.1/noarch/napari-result-stack-0.0.1-pyhd8ed1ab_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-result-stack.make_qwidget,Open Result stack,napari_result_stack:QResultViewer,,,,2.1,napari-result-stack,0.0.1,,Widgets and type annotations for storing function results of any types,"# napari-result-stack +",text/markdown,https://github.com/EPFL-Center-for-Imaging/napari-rembg.git,Mallory Wittwer,mallory.wittwer@epfl.ch,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['magicgui', 'qtpy', 'napari[all] >=0.4.16', ""rembg ; extra == 'local'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Source Code, https://github.com/EPFL-Center-for-Imaging/napari-rembg.git']","['local', 'testing']",False,0.0.5,conda-forge/napari-rembg/0.0.5,0.0.7,conda-forge/napari-rembg/0.0.7,,,conda,noarch/napari-rembg-0.0.5-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari >=0.4.16', 'numpy', 'pillow', 'python >=3.8', 'qtpy', 'rembg', 'scikit-image']",pyh9208f05_0,1700689088008.0,None-any-None,noarch,2023-11-22 21:41:45+00:00,05a379f6143e371a586a004f5aa00c8b,b2463ed98a7431f947f860f37c7f491f52ccfa9a4f0402d9d3f9a0b02619d13f,13529.0,conda-forge/napari-rembg/0.0.5/noarch/napari-rembg-0.0.5-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-rembg/0.0.5/noarch/napari-rembg-0.0.5-pyh9208f05_0.conda,conda,0.0.5,conda-forge,['main'],conda,noarch/napari-rembg-0.0.7-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari >=0.4.16', 'numpy', 'pillow', 'python >=3.8', 'qtpy', 'rembg', 'requests', 'scikit-image']",noarch,1720692370632.0,None-any-None,pyh9208f05_0,2024-07-11 10:09:42.766000+00:00,5dbf640920c43b4d3ab1b8715189b0da,a04f428e4600a2afefdf3066689820c6b26392db2357f062a50cfad0c3031b26,15932.0,conda-forge/napari-rembg/0.0.7/noarch/napari-rembg-0.0.7-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-rembg/0.0.7/noarch/napari-rembg-0.0.7-pyh9208f05_0.conda,conda,0.0.7,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,napari-rembg.remote,Select foreground (Web API),napari_rembg:RemotePredictorWidget,,,,,,,napari-rembg.local,Select foreground,False,napari-rembg.remote,Select foreground (Web API),False,,,,,,,,,,,,,,,,,,napari,Tabueran Kiribati,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +314,napari-result-stack,0.0.1,Result stack,Widgets and type annotations for storing function results of any types,Hanjin Liu,BSD-3-Clause,https://github.com/hanjinliu/napari-result-stack,642c6e1a62088ab446d3f0cc,['conda'],,https://github.com/hanjinliu/napari-result-stack,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-result-stack,http://api.anaconda.org/packages/conda-forge/napari-result-stack,http://anaconda.org/conda-forge/napari-result-stack,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-result-stack/0.0.1,1.0,0.0,2023-04-04 18:36:07.372000+00:00,2023-06-18 17:27:57.331000+00:00,conda,noarch/napari-result-stack-0.0.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy']",noarch,1680633223028.0,None-any-None,pyhd8ed1ab_0,2023-04-04 18:36:07.964000+00:00,1b683d3112aa3d2f7b40b40bd1d032ae,b8091a1815b9be33c119c1902fb9888b101a311d4a34500b39f8bff6ad982f63,24030.0,conda-forge/napari-result-stack/0.0.1/noarch/napari-result-stack-0.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-result-stack/0.0.1/noarch/napari-result-stack-0.0.1-pyhd8ed1ab_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-result-stack.make_qwidget,Open Result stack,napari_result_stack:QResultViewer,,,,2.1,napari-result-stack,0.0.1,,Widgets and type annotations for storing function results of any types,"# napari-result-stack [![License BSD-3](https://img.shields.io/pypi/l/napari-result-stack.svg?color=green)](https://github.com/hanjinliu/napari-result-stack/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-result-stack.svg?color=green)](https://pypi.org/project/napari-result-stack) @@ -31562,8 +32825,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/hanjinliu/napari-result-stack,Hanjin Liu,liuhanjin-sc@g.ecc.u-tokyo.ac.jp,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/hanjinliu/napari-result-stack/issues', 'Documentation, https://github.com/hanjinliu/napari-result-stack#README.md', 'Source Code, https://github.com/hanjinliu/napari-result-stack', 'User Support, https://github.com/hanjinliu/napari-result-stack/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-result-stack.make_qwidget,Result stack,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -302,napari-rioxarray,0.0.1,Rioxarray Plugin,A rioxarray plugin for napari supporting GDAL raster datatypes,Dr. Andrew Annex,BSD-3-Clause,https://github.com/AndrewAnnex/napari-rioxarray,6436edea61e1ea32f8617a87,['conda'],,https://github.com/AndrewAnnex/napari-rioxarray,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-rioxarray,http://api.anaconda.org/packages/conda-forge/napari-rioxarray,http://anaconda.org/conda-forge/napari-rioxarray,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-rioxarray/0.0.1,1.0,0.0,2023-04-12 17:44:06.627000+00:00,2023-06-18 17:28:00.113000+00:00,conda,noarch/napari-rioxarray-0.0.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['napari', 'numpy', 'python >=3.8', 'rioxarray']",noarch,1681321258540.0,None-any-None,pyhd8ed1ab_0,2023-04-12 17:44:07.391000+00:00,f6b77cdbdbe397b3ce2e286dda3a29cc,0f4495a7d06260dc5b8b2fcb942ddc9a55a8f57f556d6930a418f9b567ce9e93,108969.0,conda-forge/napari-rioxarray/0.0.1/noarch/napari-rioxarray-0.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-rioxarray/0.0.1/noarch/napari-rioxarray-0.0.1-pyhd8ed1ab_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-rioxarray.get_reader,Open data with Rioxarray Plugin,napari_rioxarray._reader:napari_get_reader,napari-rioxarray.get_reader,"['*.vrt', '*.tif', '*.tiff', '*.TIF', '*.TIFF', '*.img', '*.lbl', '*.cub', '*.fits', '*.IMG', '*.LBL', '*.CUB', '*.FITS']",False,2.1,napari-rioxarray,0.0.1,,A rioxarray plugin for napari supporting GDAL raster datatypes,"# napari-rioxarray +",text/markdown,https://github.com/hanjinliu/napari-result-stack,Hanjin Liu,liuhanjin-sc@g.ecc.u-tokyo.ac.jp,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/hanjinliu/napari-result-stack/issues', 'Documentation, https://github.com/hanjinliu/napari-result-stack#README.md', 'Source Code, https://github.com/hanjinliu/napari-result-stack', 'User Support, https://github.com/hanjinliu/napari-result-stack/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-result-stack.make_qwidget,Result stack,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +315,napari-rioxarray,0.0.1,Rioxarray Plugin,A rioxarray plugin for napari supporting GDAL raster datatypes,Dr. Andrew Annex,BSD-3-Clause,https://github.com/AndrewAnnex/napari-rioxarray,6436edea61e1ea32f8617a87,['conda'],,https://github.com/AndrewAnnex/napari-rioxarray,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-rioxarray,http://api.anaconda.org/packages/conda-forge/napari-rioxarray,http://anaconda.org/conda-forge/napari-rioxarray,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-rioxarray/0.0.1,1.0,0.0,2023-04-12 17:44:06.627000+00:00,2023-06-18 17:28:00.113000+00:00,conda,noarch/napari-rioxarray-0.0.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['napari', 'numpy', 'python >=3.8', 'rioxarray']",noarch,1681321258540.0,None-any-None,pyhd8ed1ab_0,2023-04-12 17:44:07.391000+00:00,f6b77cdbdbe397b3ce2e286dda3a29cc,0f4495a7d06260dc5b8b2fcb942ddc9a55a8f57f556d6930a418f9b567ce9e93,108969.0,conda-forge/napari-rioxarray/0.0.1/noarch/napari-rioxarray-0.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-rioxarray/0.0.1/noarch/napari-rioxarray-0.0.1-pyhd8ed1ab_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-rioxarray.get_reader,Open data with Rioxarray Plugin,napari_rioxarray._reader:napari_get_reader,napari-rioxarray.get_reader,"['*.vrt', '*.tif', '*.tiff', '*.TIF', '*.TIFF', '*.img', '*.lbl', '*.cub', '*.fits', '*.IMG', '*.LBL', '*.CUB', '*.FITS']",False,2.1,napari-rioxarray,0.0.1,,A rioxarray plugin for napari supporting GDAL raster datatypes,"# napari-rioxarray [![License BSD-3](https://img.shields.io/pypi/l/napari-rioxarray.svg?color=green)](https://github.com/AndrewAnnex/napari-rioxarray/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-rioxarray.svg?color=green)](https://pypi.org/project/napari-rioxarray) @@ -31630,8 +32893,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/AndrewAnnex/napari-rioxarray,Dr. Andrew Annex,ama6fy@virginia.edu,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'napari', 'rioxarray', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/AndrewAnnex/napari-rioxarray/issues', 'Documentation, https://github.com/AndrewAnnex/napari-rioxarray#README.md', 'Source Code, https://github.com/AndrewAnnex/napari-rioxarray', 'User Support, https://github.com/AndrewAnnex/napari-rioxarray/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -303,napari-roi,0.1.8,napari-roi,Select regions of interest (ROIs) using napari,Jonas Windhager,MIT,https://github.com/BodenmillerGroup/napari-roi,61f855274645634239bf014c,['conda'],,https://github.com/BodenmillerGroup/napari-roi,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-roi,http://api.anaconda.org/packages/conda-forge/napari-roi,http://anaconda.org/conda-forge/napari-roi,"['0.1.0', '0.1.1', '0.1.3', '0.1.4', '0.1.5', '0.1.6', '0.1.7', '0.1.8']",0.1.8,0.1.8,['noarch'],10.0,,"['pyhd8ed1ab_0', 'pyhd8ed1ab_1']",0.1.0,conda-forge/napari-roi/0.1.0,1.0,0.0,2022-01-31 21:31:17.136000+00:00,2023-06-18 08:40:40.483000+00:00,conda,noarch/napari-roi-0.1.0-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['napari >=0.4.12', 'napari-plugin-engine >=0.1.4', 'numpy', 'pandas', 'python >=3.7']",noarch,1643664524419.0,None-any-None,pyhd8ed1ab_0,2022-01-31 21:31:17.414000+00:00,7932e5aec962e9f4fbd696975c431e33,None,15059.0,conda-forge/napari-roi/0.1.0/noarch/napari-roi-0.1.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-roi/0.1.0/noarch/napari-roi-0.1.0-pyhd8ed1ab_0.tar.bz2,conda,0.1.0,conda-forge,['main'],public,,0.1.0,napari-roi.ROIWidget,Create regions of interest,napari_roi:ROIWidget,,,,2.1,napari-roi,0.1.8,,Select regions of interest (ROIs) using napari,"# napari-roi +",text/markdown,https://github.com/AndrewAnnex/napari-rioxarray,Dr. Andrew Annex,ama6fy@virginia.edu,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'napari', 'rioxarray', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/AndrewAnnex/napari-rioxarray/issues', 'Documentation, https://github.com/AndrewAnnex/napari-rioxarray#README.md', 'Source Code, https://github.com/AndrewAnnex/napari-rioxarray', 'User Support, https://github.com/AndrewAnnex/napari-rioxarray/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +316,napari-roi,0.1.8,napari-roi,Select regions of interest (ROIs) using napari,Jonas Windhager,MIT,https://github.com/BodenmillerGroup/napari-roi,61f855274645634239bf014c,['conda'],,https://github.com/BodenmillerGroup/napari-roi,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-roi,http://api.anaconda.org/packages/conda-forge/napari-roi,http://anaconda.org/conda-forge/napari-roi,"['0.1.0', '0.1.1', '0.1.3', '0.1.4', '0.1.5', '0.1.6', '0.1.7', '0.1.8']",0.1.8,0.1.8,['noarch'],10.0,,"['pyhd8ed1ab_0', 'pyhd8ed1ab_1']",0.1.0,conda-forge/napari-roi/0.1.0,1.0,0.0,2022-01-31 21:31:17.136000+00:00,2023-06-18 08:40:40.483000+00:00,conda,noarch/napari-roi-0.1.0-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['napari >=0.4.12', 'napari-plugin-engine >=0.1.4', 'numpy', 'pandas', 'python >=3.7']",noarch,1643664524419.0,None-any-None,pyhd8ed1ab_0,2022-01-31 21:31:17.414000+00:00,7932e5aec962e9f4fbd696975c431e33,None,15059.0,conda-forge/napari-roi/0.1.0/noarch/napari-roi-0.1.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-roi/0.1.0/noarch/napari-roi-0.1.0-pyhd8ed1ab_0.tar.bz2,conda,0.1.0,conda-forge,['main'],public,,0.1.0,napari-roi.ROIWidget,Create regions of interest,napari_roi:ROIWidget,,,,2.1,napari-roi,0.1.8,,Select regions of interest (ROIs) using napari,"# napari-roi [![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-roi)](https://napari-hub.org/plugins/napari-roi) [![PyPI](https://img.shields.io/pypi/v/napari-roi.svg?color=green)](https://pypi.org/project/napari-roi) @@ -31685,8 +32948,8 @@ Maintained by [Milad Adibi](mailto:milad.adibi@uzh.ch) from February 2023. ## License [MIT](https://github.com/BodenmillerGroup/napari-roi/blob/main/LICENSE) -",text/markdown,https://github.com/BodenmillerGroup/napari-roi,Jonas Windhager,jonas@windhager.io,MIT,"['Framework :: napari', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'License :: OSI Approved :: MIT License']","['numpy', 'pandas', 'qtpy']",>=3.8,"['Bug Tracker, https://github.com/BodenmillerGroup/napari-roi/issues', 'Documentation, https://github.com/BodenmillerGroup/napari-roi#README.md', 'Source Code, https://github.com/BodenmillerGroup/napari-roi', 'User Support, https://github.com/BodenmillerGroup/napari-roi/issues']",,False,0.1.1,conda-forge/napari-roi/0.1.1,0.1.3,conda-forge/napari-roi/0.1.3,0.1.4,conda-forge/napari-roi/0.1.4,conda,noarch/napari-roi-0.1.1-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['napari >=0.4.12', 'napari-plugin-engine >=0.1.4', 'numpy', 'pandas', 'python >=3.7']",pyhd8ed1ab_0,1644079752483.0,None-any-None,noarch,2022-02-05 16:51:51.951000+00:00,e1d26a81b0a9aef854fc163397391ff7,None,15285.0,conda-forge/napari-roi/0.1.1/noarch/napari-roi-0.1.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-roi/0.1.1/noarch/napari-roi-0.1.1-pyhd8ed1ab_0.tar.bz2,conda,0.1.1,conda-forge,['main'],conda,noarch/napari-roi-0.1.3-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['napari >=0.4.12', 'napari-plugin-engine >=0.1.4', 'numpy', 'pandas', 'python >=3.7']",noarch,1644498397646.0,None-any-None,pyhd8ed1ab_0,2022-02-10 13:09:03.535000+00:00,8fc193fd62f9afd9133f9ff8661d2f81,None,15493.0,conda-forge/napari-roi/0.1.3/noarch/napari-roi-0.1.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-roi/0.1.3/noarch/napari-roi-0.1.3-pyhd8ed1ab_0.tar.bz2,conda,0.1.3,conda-forge,['main'],conda,noarch/napari-roi-0.1.3-pyhd8ed1ab_1.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_1,1.0,"['napari >=0.4.12', 'napari-plugin-engine >=0.1.4', 'numpy', 'pandas', 'python >=3.7', 'qtpy', 'vispy']",MIT,python,1644521275569.0,2022-02-10 19:30:45.515000+00:00,8cef793a52a856e4720f48b07ccad825,None,15471.0,conda-forge/napari-roi/0.1.3/noarch/napari-roi-0.1.3-pyhd8ed1ab_1.tar.bz2,//api.anaconda.org/download/conda-forge/napari-roi/0.1.3/noarch/napari-roi-0.1.3-pyhd8ed1ab_1.tar.bz2,conda,0.1.3,conda-forge,['main'],,,,,,,,,,,napari-roi.ROIWidget,regions of interest,False,,,,,,,,,,,,,,,,,,,,,,,0.1.5,conda-forge/napari-roi/0.1.5,0.1.6,conda-forge/napari-roi/0.1.6,0.1.7,conda-forge/napari-roi/0.1.7,conda,noarch/napari-roi-0.1.4-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['napari >=0.4.12', 'napari-plugin-engine >=0.1.4', 'numpy', 'pandas', 'python >=3.7', 'qtpy', 'vispy']",noarch,1654159242790.0,None-any-None,pyhd8ed1ab_0,2022-06-02 08:43:02.456000+00:00,19f453ba87d19026023d2f185772e8f9,None,15665.0,conda-forge/napari-roi/0.1.4/noarch/napari-roi-0.1.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-roi/0.1.4/noarch/napari-roi-0.1.4-pyhd8ed1ab_0.tar.bz2,conda,0.1.4,conda-forge,['main'],conda,noarch/napari-roi-0.1.5-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['napari >=0.4.12', 'napari-plugin-engine >=0.1.4', 'numpy', 'pandas', 'python >=3.7', 'qtpy', 'vispy']",noarch,1654214119124.0,None-any-None,pyhd8ed1ab_0,2022-06-02 23:57:54.766000+00:00,43d4eb2be68341af4297588b75d28c4a,None,15713.0,conda-forge/napari-roi/0.1.5/noarch/napari-roi-0.1.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-roi/0.1.5/noarch/napari-roi-0.1.5-pyhd8ed1ab_0.tar.bz2,conda,0.1.5,conda-forge,['main'],conda,noarch/napari-roi-0.1.6-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari >=0.4.12', 'napari-plugin-engine >=0.1.4', 'numpy', 'pandas', 'python >=3.7', 'qtpy', 'vispy']",MIT,python,1654254182604.0,2022-06-03 11:05:19.074000+00:00,2f0d3d0406c6a5d3eebfd1f2287fdafa,None,15743.0,conda-forge/napari-roi/0.1.6/noarch/napari-roi-0.1.6-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-roi/0.1.6/noarch/napari-roi-0.1.6-pyhd8ed1ab_0.tar.bz2,conda,0.1.6,conda-forge,['main'],,,,,,,0.1.8,conda-forge/napari-roi/0.1.8,,,conda,noarch/napari-roi-0.1.7-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['napari >=0.4.13', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'vispy']",noarch,1660298507702.0,None-any-None,pyhd8ed1ab_0,2022-08-12 10:03:50.066000+00:00,03a2bb0e12266a8f13992dcab99f6f48,None,16973.0,conda-forge/napari-roi/0.1.7/noarch/napari-roi-0.1.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-roi/0.1.7/noarch/napari-roi-0.1.7-pyhd8ed1ab_0.tar.bz2,conda,0.1.7,conda-forge,['main'],conda,noarch/napari-roi-0.1.8-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari >=0.4.13', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'vispy']",MIT,python,1676652638432.0,2023-02-17 16:52:18.699000+00:00,59ea8b892c1c9450f381ba1f25fafad6,82a862627c63117d95661aaad61e1bd17c25ce020fe70f857352539d61e86d0e,18063.0,conda-forge/napari-roi/0.1.8/noarch/napari-roi-0.1.8-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-roi/0.1.8/noarch/napari-roi-0.1.8-pyhd8ed1ab_0.conda,conda,0.1.8,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -304,napari-roi-manager,0.0.3,ROI Manager,A ROI Manager Widget with an UI similar to ImageJ,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-roi-manager.make_qwidget,Open ROI manager widget,napari_roi_manager:QRoiManager,,,,2.3,napari-roi-manager,0.0.3,,A ROI Manager Widget with an UI similar to ImageJ,"# napari-roi-manager +",text/markdown,https://github.com/BodenmillerGroup/napari-roi,Jonas Windhager,jonas@windhager.io,MIT,"['Framework :: napari', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'License :: OSI Approved :: MIT License']","['numpy', 'pandas', 'qtpy']",>=3.8,"['Bug Tracker, https://github.com/BodenmillerGroup/napari-roi/issues', 'Documentation, https://github.com/BodenmillerGroup/napari-roi#README.md', 'Source Code, https://github.com/BodenmillerGroup/napari-roi', 'User Support, https://github.com/BodenmillerGroup/napari-roi/issues']",,False,0.1.1,conda-forge/napari-roi/0.1.1,0.1.3,conda-forge/napari-roi/0.1.3,0.1.4,conda-forge/napari-roi/0.1.4,conda,noarch/napari-roi-0.1.1-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['napari >=0.4.12', 'napari-plugin-engine >=0.1.4', 'numpy', 'pandas', 'python >=3.7']",pyhd8ed1ab_0,1644079752483.0,None-any-None,noarch,2022-02-05 16:51:51.951000+00:00,e1d26a81b0a9aef854fc163397391ff7,None,15285.0,conda-forge/napari-roi/0.1.1/noarch/napari-roi-0.1.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-roi/0.1.1/noarch/napari-roi-0.1.1-pyhd8ed1ab_0.tar.bz2,conda,0.1.1,conda-forge,['main'],conda,noarch/napari-roi-0.1.3-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['napari >=0.4.12', 'napari-plugin-engine >=0.1.4', 'numpy', 'pandas', 'python >=3.7']",noarch,1644498397646.0,None-any-None,pyhd8ed1ab_0,2022-02-10 13:09:03.535000+00:00,8fc193fd62f9afd9133f9ff8661d2f81,None,15493.0,conda-forge/napari-roi/0.1.3/noarch/napari-roi-0.1.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-roi/0.1.3/noarch/napari-roi-0.1.3-pyhd8ed1ab_0.tar.bz2,conda,0.1.3,conda-forge,['main'],conda,noarch/napari-roi-0.1.3-pyhd8ed1ab_1.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_1,1.0,"['napari >=0.4.12', 'napari-plugin-engine >=0.1.4', 'numpy', 'pandas', 'python >=3.7', 'qtpy', 'vispy']",MIT,python,1644521275569.0,2022-02-10 19:30:45.515000+00:00,8cef793a52a856e4720f48b07ccad825,None,15471.0,conda-forge/napari-roi/0.1.3/noarch/napari-roi-0.1.3-pyhd8ed1ab_1.tar.bz2,//api.anaconda.org/download/conda-forge/napari-roi/0.1.3/noarch/napari-roi-0.1.3-pyhd8ed1ab_1.tar.bz2,conda,0.1.3,conda-forge,['main'],,,,,,,,,,,napari-roi.ROIWidget,regions of interest,False,,,,,,,,,,,,,,,,,,,,,,,0.1.5,conda-forge/napari-roi/0.1.5,0.1.6,conda-forge/napari-roi/0.1.6,0.1.7,conda-forge/napari-roi/0.1.7,conda,noarch/napari-roi-0.1.4-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['napari >=0.4.12', 'napari-plugin-engine >=0.1.4', 'numpy', 'pandas', 'python >=3.7', 'qtpy', 'vispy']",noarch,1654159242790.0,None-any-None,pyhd8ed1ab_0,2022-06-02 08:43:02.456000+00:00,19f453ba87d19026023d2f185772e8f9,None,15665.0,conda-forge/napari-roi/0.1.4/noarch/napari-roi-0.1.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-roi/0.1.4/noarch/napari-roi-0.1.4-pyhd8ed1ab_0.tar.bz2,conda,0.1.4,conda-forge,['main'],conda,noarch/napari-roi-0.1.5-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['napari >=0.4.12', 'napari-plugin-engine >=0.1.4', 'numpy', 'pandas', 'python >=3.7', 'qtpy', 'vispy']",noarch,1654214119124.0,None-any-None,pyhd8ed1ab_0,2022-06-02 23:57:54.766000+00:00,43d4eb2be68341af4297588b75d28c4a,None,15713.0,conda-forge/napari-roi/0.1.5/noarch/napari-roi-0.1.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-roi/0.1.5/noarch/napari-roi-0.1.5-pyhd8ed1ab_0.tar.bz2,conda,0.1.5,conda-forge,['main'],conda,noarch/napari-roi-0.1.6-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari >=0.4.12', 'napari-plugin-engine >=0.1.4', 'numpy', 'pandas', 'python >=3.7', 'qtpy', 'vispy']",MIT,python,1654254182604.0,2022-06-03 11:05:19.074000+00:00,2f0d3d0406c6a5d3eebfd1f2287fdafa,None,15743.0,conda-forge/napari-roi/0.1.6/noarch/napari-roi-0.1.6-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-roi/0.1.6/noarch/napari-roi-0.1.6-pyhd8ed1ab_0.tar.bz2,conda,0.1.6,conda-forge,['main'],,,,,,,0.1.8,conda-forge/napari-roi/0.1.8,,,conda,noarch/napari-roi-0.1.7-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['napari >=0.4.13', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'vispy']",noarch,1660298507702.0,None-any-None,pyhd8ed1ab_0,2022-08-12 10:03:50.066000+00:00,03a2bb0e12266a8f13992dcab99f6f48,None,16973.0,conda-forge/napari-roi/0.1.7/noarch/napari-roi-0.1.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-roi/0.1.7/noarch/napari-roi-0.1.7-pyhd8ed1ab_0.tar.bz2,conda,0.1.7,conda-forge,['main'],conda,noarch/napari-roi-0.1.8-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari >=0.4.13', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'vispy']",MIT,python,1676652638432.0,2023-02-17 16:52:18.699000+00:00,59ea8b892c1c9450f381ba1f25fafad6,82a862627c63117d95661aaad61e1bd17c25ce020fe70f857352539d61e86d0e,18063.0,conda-forge/napari-roi/0.1.8/noarch/napari-roi-0.1.8-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-roi/0.1.8/noarch/napari-roi-0.1.8-pyhd8ed1ab_0.conda,conda,0.1.8,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +317,napari-roi-manager,0.0.3,ROI Manager,A ROI Manager Widget with an UI similar to ImageJ,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-roi-manager.make_qwidget,Open ROI manager widget,napari_roi_manager:QRoiManager,,,,2.3,napari-roi-manager,0.0.3,,A ROI Manager Widget with an UI similar to ImageJ,"# napari-roi-manager [![License BSD-3](https://img.shields.io/pypi/l/napari-roi-manager.svg?color=green)](https://github.com/hanjinliu/napari-roi-manager/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-roi-manager.svg?color=green)](https://pypi.org/project/napari-roi-manager) @@ -31750,8 +33013,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,,,Hanjin Liu ,,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'qtpy', ""napari; extra == 'testing'"", ""pyqt5; extra == 'testing'"", ""pytest; extra == 'testing'"", ""pytest-cov; extra == 'testing'"", ""pytest-qt; extra == 'testing'"", ""tox; extra == 'testing'""]",>=3.9,"['Bug Tracker, https://github.com/hanjinliu/napari-roi-manager/issues', 'Documentation, https://github.com/hanjinliu/napari-roi-manager#README.md', 'Homepage, https://github.com/hanjinliu/napari-roi-manager', 'Source Code, https://github.com/hanjinliu/napari-roi-manager', 'User Support, https://github.com/hanjinliu/napari-roi-manager/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['Annotation'],,,,,,,,,,napari-roi-manager.make_qwidget,ROI Manager,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -305,napari-roi-registration,0.1.4,Roi Registration,A plugin to perform registration of regions-of-interests in time-lapse data.,Andrea Bassi and Giorgia Tortora,BSD-3-Clause,https://github.com/GiorgiaTortora/napari-roi-registration,62ab650a07f17403f8a062e7,['conda'],,https://github.com/GiorgiaTortora/napari-roi-registration,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-roi-registration,http://api.anaconda.org/packages/conda-forge/napari-roi-registration,http://anaconda.org/conda-forge/napari-roi-registration,"['0.1.1', '0.1.2', '0.1.3']",0.1.3,0.1.3,['noarch'],7.0,https://github.com/GiorgiaTortora/napari-roi-registration,['pyhd8ed1ab_0'],0.1.1,conda-forge/napari-roi-registration/0.1.1,1.0,0.0,2022-06-16 17:14:47.352000+00:00,2023-11-07 21:09:17.297000+00:00,conda,noarch/napari-roi-registration-0.1.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'opencv', 'openpyxl', 'python >=3.8', 'qtpy', 'scikit-image']",noarch,1655399478679.0,None-any-None,pyhd8ed1ab_0,2022-06-16 17:14:47.911000+00:00,51c0c894f05d1ce8a5d3e597e1699253,None,17927.0,conda-forge/napari-roi-registration/0.1.1/noarch/napari-roi-registration-0.1.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-roi-registration/0.1.1/noarch/napari-roi-registration-0.1.1-pyhd8ed1ab_0.tar.bz2,conda,0.1.1,conda-forge,['main'],public,,0.2.1,napari-roi-registration.make_background_widget,Make background widget,napari_roi_registration._widget:subtract_background,,,,2.1,napari-roi-registration,0.1.4,,A plugin to perform registration of regions-of-interests in time-lapse data.,"# napari-roi-registration +",text/markdown,,,Hanjin Liu ,,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'qtpy', ""napari; extra == 'testing'"", ""pyqt5; extra == 'testing'"", ""pytest; extra == 'testing'"", ""pytest-cov; extra == 'testing'"", ""pytest-qt; extra == 'testing'"", ""tox; extra == 'testing'""]",>=3.9,"['Bug Tracker, https://github.com/hanjinliu/napari-roi-manager/issues', 'Documentation, https://github.com/hanjinliu/napari-roi-manager#README.md', 'Homepage, https://github.com/hanjinliu/napari-roi-manager', 'Source Code, https://github.com/hanjinliu/napari-roi-manager', 'User Support, https://github.com/hanjinliu/napari-roi-manager/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['Annotation'],,,,,,,,,,napari-roi-manager.make_qwidget,ROI Manager,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +318,napari-roi-registration,0.1.4,Roi Registration,A plugin to perform registration of regions-of-interests in time-lapse data.,Andrea Bassi and Giorgia Tortora,BSD-3-Clause,https://github.com/GiorgiaTortora/napari-roi-registration,62ab650a07f17403f8a062e7,['conda'],,https://github.com/GiorgiaTortora/napari-roi-registration,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-roi-registration,http://api.anaconda.org/packages/conda-forge/napari-roi-registration,http://anaconda.org/conda-forge/napari-roi-registration,"['0.1.1', '0.1.2', '0.1.3']",0.1.3,0.1.3,['noarch'],7.0,https://github.com/GiorgiaTortora/napari-roi-registration,['pyhd8ed1ab_0'],0.1.1,conda-forge/napari-roi-registration/0.1.1,1.0,0.0,2022-06-16 17:14:47.352000+00:00,2023-11-07 21:09:17.297000+00:00,conda,noarch/napari-roi-registration-0.1.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'opencv', 'openpyxl', 'python >=3.8', 'qtpy', 'scikit-image']",noarch,1655399478679.0,None-any-None,pyhd8ed1ab_0,2022-06-16 17:14:47.911000+00:00,51c0c894f05d1ce8a5d3e597e1699253,None,17927.0,conda-forge/napari-roi-registration/0.1.1/noarch/napari-roi-registration-0.1.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-roi-registration/0.1.1/noarch/napari-roi-registration-0.1.1-pyhd8ed1ab_0.tar.bz2,conda,0.1.1,conda-forge,['main'],public,,0.2.1,napari-roi-registration.make_background_widget,Make background widget,napari_roi_registration._widget:subtract_background,,,,2.1,napari-roi-registration,0.1.4,,A plugin to perform registration of regions-of-interests in time-lapse data.,"# napari-roi-registration [![License](https://img.shields.io/pypi/l/napari-roi-registration.svg?color=green)](https://github.com/GiorgiaTortora/napari-roi-registration/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-roi-registration.svg?color=green)](https://pypi.org/project/napari-roi-registration) @@ -31860,8 +33123,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/GiorgiaTortora/napari-roi-registration,Andrea Bassi and Giorgia Tortora,giorgia.tortora@polimi.it,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['numpy', 'magicgui', 'qtpy', 'scikit-image', 'opencv-python', 'matplotlib', 'openpyxl', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""scikit-image ; extra == 'testing'"", ""opencv-python-headless ; extra == 'testing'"", ""matplotlib ; extra == 'testing'"", ""openpyxl ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/GiorgiaTortora/napari-roi-registration/issues', 'Documentation, https://github.com/GiorgiaTortora/napari-roi-registration#README.md', 'Source Code, https://github.com/GiorgiaTortora/napari-roi-registration', 'User Support, https://github.com/GiorgiaTortora/napari-roi-registration/issues']",['testing'],False,0.1.2,conda-forge/napari-roi-registration/0.1.2,0.1.3,conda-forge/napari-roi-registration/0.1.3,,,conda,noarch/napari-roi-registration-0.1.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'opencv', 'openpyxl', 'python >=3.8', 'qtpy', 'scikit-image']",pyhd8ed1ab_0,1657053276139.0,None-any-None,noarch,2022-07-05 20:37:27.149000+00:00,503c93619af36f10fe22c70b3f9395a0,None,18116.0,conda-forge/napari-roi-registration/0.1.2/noarch/napari-roi-registration-0.1.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-roi-registration/0.1.2/noarch/napari-roi-registration-0.1.2-pyhd8ed1ab_0.tar.bz2,conda,0.1.2,conda-forge,['main'],conda,noarch/napari-roi-registration-0.1.3-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'opencv', 'openpyxl', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image']",noarch,1699391218123.0,None-any-None,pyhd8ed1ab_0,2023-11-07 21:09:15.771000+00:00,4cdefa5a6482b698b650c20e416ab76c,e9f398aa0713cdb843744c85dfb2441e0407618e837bbde8d9e62bfdb1ecd6d9,20772.0,conda-forge/napari-roi-registration/0.1.3/noarch/napari-roi-registration-0.1.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-roi-registration/0.1.3/noarch/napari-roi-registration-0.1.3-pyhd8ed1ab_0.conda,conda,0.1.3,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,napari-roi-registration.make_registration_widget,Make registration widget,napari_roi_registration._widget:register_rois,napari-roi-registration.make_processing_widget,Make processing widget,napari_roi_registration._widget:process_rois,,,,napari-roi-registration.make_background_widget,Background Widget,False,napari-roi-registration.make_registration_widget,Registration Widget,False,napari-roi-registration.make_processing_widget,Processing Widget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -306,napari-sairyscan,0.0.2,napari sairyscan,Airyscan image reconstruction,Sylvain Prigent,BSD-3-Clause,https://github.com/sylvainprigent/napari-sairyscan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-sairyscan.get_reader,Open data with napari sairyscan,napari_sairyscan._reader:napari_get_reader,napari-sairyscan.get_reader,['*.czi'],False,2.1,napari-sairyscan,0.0.2,,Airyscan image reconstruction,"# napari-sairyscan +",text/markdown,https://github.com/GiorgiaTortora/napari-roi-registration,Andrea Bassi and Giorgia Tortora,giorgia.tortora@polimi.it,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['numpy', 'magicgui', 'qtpy', 'scikit-image', 'opencv-python', 'matplotlib', 'openpyxl', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""scikit-image ; extra == 'testing'"", ""opencv-python-headless ; extra == 'testing'"", ""matplotlib ; extra == 'testing'"", ""openpyxl ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/GiorgiaTortora/napari-roi-registration/issues', 'Documentation, https://github.com/GiorgiaTortora/napari-roi-registration#README.md', 'Source Code, https://github.com/GiorgiaTortora/napari-roi-registration', 'User Support, https://github.com/GiorgiaTortora/napari-roi-registration/issues']",['testing'],False,0.1.2,conda-forge/napari-roi-registration/0.1.2,0.1.3,conda-forge/napari-roi-registration/0.1.3,,,conda,noarch/napari-roi-registration-0.1.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'opencv', 'openpyxl', 'python >=3.8', 'qtpy', 'scikit-image']",pyhd8ed1ab_0,1657053276139.0,None-any-None,noarch,2022-07-05 20:37:27.149000+00:00,503c93619af36f10fe22c70b3f9395a0,None,18116.0,conda-forge/napari-roi-registration/0.1.2/noarch/napari-roi-registration-0.1.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-roi-registration/0.1.2/noarch/napari-roi-registration-0.1.2-pyhd8ed1ab_0.tar.bz2,conda,0.1.2,conda-forge,['main'],conda,noarch/napari-roi-registration-0.1.3-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'opencv', 'openpyxl', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image']",noarch,1699391218123.0,None-any-None,pyhd8ed1ab_0,2023-11-07 21:09:15.771000+00:00,4cdefa5a6482b698b650c20e416ab76c,e9f398aa0713cdb843744c85dfb2441e0407618e837bbde8d9e62bfdb1ecd6d9,20772.0,conda-forge/napari-roi-registration/0.1.3/noarch/napari-roi-registration-0.1.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-roi-registration/0.1.3/noarch/napari-roi-registration-0.1.3-pyhd8ed1ab_0.conda,conda,0.1.3,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,napari-roi-registration.make_registration_widget,Make registration widget,napari_roi_registration._widget:register_rois,napari-roi-registration.make_processing_widget,Make processing widget,napari_roi_registration._widget:process_rois,,,,napari-roi-registration.make_background_widget,Background Widget,False,napari-roi-registration.make_registration_widget,Registration Widget,False,napari-roi-registration.make_processing_widget,Processing Widget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +319,napari-sairyscan,0.0.2,napari sairyscan,Airyscan image reconstruction,Sylvain Prigent,BSD-3-Clause,https://github.com/sylvainprigent/napari-sairyscan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-sairyscan.get_reader,Open data with napari sairyscan,napari_sairyscan._reader:napari_get_reader,napari-sairyscan.get_reader,['*.czi'],False,2.1,napari-sairyscan,0.0.2,,Airyscan image reconstruction,"# napari-sairyscan [![License](https://img.shields.io/pypi/l/napari-sairyscan.svg?color=green)](https://github.com/sylvainprigent/napari-sairyscan/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-sairyscan.svg?color=green)](https://pypi.org/project/napari-sairyscan) @@ -31928,8 +33191,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/sylvainprigent/napari-sairyscan,Sylvain Prigent,meriadec.prigent@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['numpy', 'magicgui', 'qtpy', 'sairyscan (>=0.0.2)', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/sylvainprigent/napari-sairyscan/issues', 'Documentation, https://github.com/sylvainprigent/napari-sairyscan#README.md', 'Source Code, https://github.com/sylvainprigent/napari-sairyscan', 'User Support, https://github.com/sylvainprigent/napari-sairyscan/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-sairyscan.make_sample_data,Load sample data from napari sairyscan,napari_sairyscan._sample_data:make_sample_data,napari-sairyscan.make_qwidget,Airyscan reconstruction,napari_sairyscan._widget:SAiryscanWidget,,,,napari-sairyscan.make_qwidget,Airyscan reconstruction,False,,,,,,,,,,,,,,,,,,,,napari-sairyscan.make_sample_data,unique_id.1,SAiryscan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -307,napari-sam,0.4.13,Segment Anything,Segment anything with Meta AI's new SAM model!,Karol Gotkowski,Apache-2.0,https://github.com/MIC-DKFZ/napari-sam,64556ae0452061e687b3aa6a,['conda'],,https://github.com/MIC-DKFZ/napari-sam,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-sam,http://api.anaconda.org/packages/conda-forge/napari-sam,http://anaconda.org/conda-forge/napari-sam,"['0.3.10', '0.4.6', '0.4.7', '0.4.9', '0.4.11', '0.4.12', '0.4.13']",0.3.10,0.4.13,['noarch'],9.0,https://github.com/MIC-DKFZ/napari-sam,"['pyh9208f05_0', 'pyhd8ed1ab_0']",0.3.10,conda-forge/napari-sam/0.3.10,1.0,0.0,2023-05-05 20:45:18.543000+00:00,2023-08-03 20:38:45.138000+00:00,conda,noarch/napari-sam-0.3.10-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['magicgui', 'napari', 'napari-nifti', 'numpy', 'python >=3.8', 'qtpy', 'segment-anything', 'tqdm', 'vispy']",noarch,1683319271720.0,None-any-None,pyhd8ed1ab_0,2023-05-05 20:45:18.884000+00:00,e35751c33228b924640931b81231bd4c,f83d766c061de67da0061c8216dc8eae298e6ec3076d53990e266f2cc9109098,22099.0,conda-forge/napari-sam/0.3.10/noarch/napari-sam-0.3.10-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-sam/0.3.10/noarch/napari-sam-0.3.10-pyhd8ed1ab_0.conda,conda,0.3.10,conda-forge,['main'],public,,0.2.1,napari-sam.make_qwidget,Segment Anything,napari_sam._widget:SamWidget,,,,2.1,napari-sam,0.4.13,,Segment anything with Meta AI's new SAM model!,"# Segment Anything Model (SAM) in Napari +",text/markdown,https://github.com/sylvainprigent/napari-sairyscan,Sylvain Prigent,meriadec.prigent@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['numpy', 'magicgui', 'qtpy', 'sairyscan (>=0.0.2)', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/sylvainprigent/napari-sairyscan/issues', 'Documentation, https://github.com/sylvainprigent/napari-sairyscan#README.md', 'Source Code, https://github.com/sylvainprigent/napari-sairyscan', 'User Support, https://github.com/sylvainprigent/napari-sairyscan/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-sairyscan.make_sample_data,Load sample data from napari sairyscan,napari_sairyscan._sample_data:make_sample_data,napari-sairyscan.make_qwidget,Airyscan reconstruction,napari_sairyscan._widget:SAiryscanWidget,,,,napari-sairyscan.make_qwidget,Airyscan reconstruction,False,,,,,,,,,,,,,,,,,,,,napari-sairyscan.make_sample_data,unique_id.1,SAiryscan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +320,napari-sam,0.4.13,Segment Anything,Segment anything with Meta AI's new SAM model!,Karol Gotkowski,Apache-2.0,https://github.com/MIC-DKFZ/napari-sam,64556ae0452061e687b3aa6a,['conda'],,https://github.com/MIC-DKFZ/napari-sam,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-sam,http://api.anaconda.org/packages/conda-forge/napari-sam,http://anaconda.org/conda-forge/napari-sam,"['0.3.10', '0.4.6', '0.4.7', '0.4.9', '0.4.11', '0.4.12', '0.4.13']",0.3.10,0.4.13,['noarch'],9.0,https://github.com/MIC-DKFZ/napari-sam,"['pyh9208f05_0', 'pyhd8ed1ab_0']",0.3.10,conda-forge/napari-sam/0.3.10,1.0,0.0,2023-05-05 20:45:18.543000+00:00,2023-08-03 20:38:45.138000+00:00,conda,noarch/napari-sam-0.3.10-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['magicgui', 'napari', 'napari-nifti', 'numpy', 'python >=3.8', 'qtpy', 'segment-anything', 'tqdm', 'vispy']",noarch,1683319271720.0,None-any-None,pyhd8ed1ab_0,2023-05-05 20:45:18.884000+00:00,e35751c33228b924640931b81231bd4c,f83d766c061de67da0061c8216dc8eae298e6ec3076d53990e266f2cc9109098,22099.0,conda-forge/napari-sam/0.3.10/noarch/napari-sam-0.3.10-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-sam/0.3.10/noarch/napari-sam-0.3.10-pyhd8ed1ab_0.conda,conda,0.3.10,conda-forge,['main'],public,,0.2.1,napari-sam.make_qwidget,Segment Anything,napari_sam._widget:SamWidget,,,,2.1,napari-sam,0.4.13,,Segment anything with Meta AI's new SAM model!,"# Segment Anything Model (SAM) in Napari [![License Apache Software License 2.0](https://img.shields.io/pypi/l/napari-sam.svg?color=green)](https://github.com/MIC-DKFZ/napari-sam/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-sam.svg?color=green)](https://pypi.org/project/napari-sam) @@ -32033,8 +33296,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc napari-sam is developed and maintained by the Applied Computer Vision Lab (ACVL) of [Helmholtz Imaging](http://helmholtz-imaging.de) and the [Division of Medical Image Computing](https://www.dkfz.de/en/mic/index.php) at the [German Cancer Research Center (DKFZ)](https://www.dkfz.de/en/index.html). -",text/markdown,https://github.com/MIC-DKFZ/napari-sam,Karol Gotkowski,karol.gotkowski@dkfz.de,Apache-2.0,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'napari', 'vispy', 'tqdm', 'napari-nifti', 'superqt', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/MIC-DKFZ/napari-sam/issues', 'Documentation, https://github.com/MIC-DKFZ/napari-sam#README.md', 'Source Code, https://github.com/MIC-DKFZ/napari-sam', 'User Support, https://github.com/MIC-DKFZ/napari-sam/issues']",['testing'],False,0.4.6,conda-forge/napari-sam/0.4.6,0.4.7,conda-forge/napari-sam/0.4.7,0.4.9,conda-forge/napari-sam/0.4.9,conda,noarch/napari-sam-0.4.6-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['magicgui', 'napari', 'napari-nifti', 'numpy', 'python >=3.8', 'pytorch >=1.7', 'qtpy', 'segment-anything', 'superqt', 'torchvision >=0.8', 'tqdm', 'vispy']",pyhd8ed1ab_0,1690335169912.0,None-any-None,noarch,2023-07-26 01:36:25.972000+00:00,3790b5d849ccca7564da69f049c759f8,de6c011ee14f1d458c91587e27c789f7ceac2a51a413b37dff1ba8ae99f63c08,27537.0,conda-forge/napari-sam/0.4.6/noarch/napari-sam-0.4.6-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-sam/0.4.6/noarch/napari-sam-0.4.6-pyhd8ed1ab_0.conda,conda,0.4.6,conda-forge,['main'],conda,noarch/napari-sam-0.4.7-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['magicgui', 'napari', 'napari-nifti', 'numpy', 'python >=3.8', 'pytorch >=1.7', 'qtpy', 'segment-anything', 'superqt', 'torchvision >=0.8', 'tqdm', 'vispy']",noarch,1690336538386.0,None-any-None,pyhd8ed1ab_0,2023-07-26 01:58:41.426000+00:00,530a215b5bdce0b523777b306198e9f3,8bd7aa59e3af883816dd3cee2ada2fe814c3bab256bfec8e7e0a1223a560d7e6,27816.0,conda-forge/napari-sam/0.4.7/noarch/napari-sam-0.4.7-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-sam/0.4.7/noarch/napari-sam-0.4.7-pyhd8ed1ab_0.conda,conda,0.4.7,conda-forge,['main'],conda,noarch/napari-sam-0.4.9-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['magicgui', 'napari', 'napari-nifti', 'numpy', 'python >=3.8', 'pytorch >=1.7', 'qtpy', 'segment-anything', 'superqt', 'torchvision >=0.8', 'tqdm', 'vispy']",Apache-2.0,python,1690337762427.0,2023-07-26 02:19:42.225000+00:00,422c8b80e7ee280dbfc21df440ae6081,a1f3a1b0f1f7b8de078aaa8ddea1c2479afecdd8c6bd5618bff73ccc769ec00a,27755.0,conda-forge/napari-sam/0.4.9/noarch/napari-sam-0.4.9-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-sam/0.4.9/noarch/napari-sam-0.4.9-pyhd8ed1ab_0.conda,conda,0.4.9,conda-forge,['main'],,,,,,,,,,,napari-sam.make_qwidget,Segment Anything,False,,,,,,,,,,,,,,,,,,,,,,,0.4.11,conda-forge/napari-sam/0.4.11,0.4.12,conda-forge/napari-sam/0.4.12,0.4.13,conda-forge/napari-sam/0.4.13,conda,noarch/napari-sam-0.4.11-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['magicgui', 'napari', 'napari-nifti', 'numpy', 'python >=3.8', 'pytorch >=1.7', 'qtpy', 'segment-anything', 'superqt', 'torchvision >=0.8', 'tqdm', 'vispy']",noarch,1690341344492.0,None-any-None,pyhd8ed1ab_0,2023-07-26 03:19:28.658000+00:00,de5693f10a563006ed48f6a4934003fa,ada2f5cc1962f7b7dd5d9478c279050a8716332cebc008cd3bb0299d3501ff8f,27821.0,conda-forge/napari-sam/0.4.11/noarch/napari-sam-0.4.11-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-sam/0.4.11/noarch/napari-sam-0.4.11-pyhd8ed1ab_0.conda,conda,0.4.11,conda-forge,['main'],conda,noarch/napari-sam-0.4.12-pyh9208f05_0.conda,0.0,Apache-2.0,False,python,"['magicgui', 'napari', 'napari-nifti', 'numpy', 'python >=3.8', 'pytorch >=1.7', 'qtpy', 'segment-anything', 'superqt', 'torchvision >=0.8', 'tqdm', 'vispy']",noarch,1690341986389.0,None-any-None,pyh9208f05_0,2023-07-26 03:30:18.622000+00:00,fc6f259ecb56c6ff2ffdfdba79f0d89d,985ffba74f1ebb2ac7b04634c0c5bee1829a5b1d58be7f60b11bfdec1f076097,27821.0,conda-forge/napari-sam/0.4.12/noarch/napari-sam-0.4.12-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-sam/0.4.12/noarch/napari-sam-0.4.12-pyh9208f05_0.conda,conda,0.4.12,conda-forge,['main'],conda,noarch/napari-sam-0.4.13-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['napari', 'napari-nifti', 'numpy', 'python >=3.8', 'pytorch >=1.7', 'qtpy', 'segment-anything', 'superqt', 'torchvision >=0.8', 'tqdm', 'vispy']",Apache-2.0,python,1691094953234.0,2023-08-03 20:38:43.717000+00:00,b7ee7761145374645d7e1829f91a56e8,877d22d311289e5774735551c488e01df6c035c2a0d7e2457bc2f3db8d75f91f,27051.0,conda-forge/napari-sam/0.4.13/noarch/napari-sam-0.4.13-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-sam/0.4.13/noarch/napari-sam-0.4.13-pyh9208f05_0.conda,conda,0.4.13,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -308,napari-SAM4IS,0.0.6,napari-SAM4IS,Create annotations for instance segmentation using Segment Anything models,Hiroki Kawai,Apache-2.0,https://github.com/hiroalchem/napari-SAM4IS,6455551cf844c85bdd3fae7c,['conda'],,https://github.com/hiroalchem/napari-SAM4IS,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-sam4is,http://api.anaconda.org/packages/conda-forge/napari-sam4is,http://anaconda.org/conda-forge/napari-sam4is,"['0.0.4', '0.0.5', '0.0.6']",0.0.6,0.0.6,['noarch'],7.0,https://github.com/hiroalchem/napari-SAM4IS,['pyhd8ed1ab_0'],0.0.4,conda-forge/napari-sam4is/0.0.4,1.0,0.0,2023-05-05 19:12:26.122000+00:00,2023-12-08 21:42:49.595000+00:00,conda,noarch/napari-sam4is-0.0.4-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'pytorch', 'qtpy', 'scikit-image', 'segment-anything', 'torchvision']",noarch,1683313789297.0,None-any-None,pyhd8ed1ab_0,2023-05-05 19:12:26.415000+00:00,87907cca4dcafed8614674c67ce647db,d449da948888da9b455d4eef8f73d7189c4466dd2fa60b4eed01c92941191e3e,18424.0,conda-forge/napari-sam4is/0.0.4/noarch/napari-sam4is-0.0.4-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-sam4is/0.0.4/noarch/napari-sam4is-0.0.4-pyhd8ed1ab_0.conda,conda,0.0.4,conda-forge,['main'],public,,0.2.1,napari-SAM4IS.make_sam_widget,Make SAM Widget,napari_sam4is._widget:SAMWidget,,,,2.1,napari-SAM4IS,0.0.6,,Create annotations for instance segmentation using Segment Anything models,"# napari-SAM4IS +",text/markdown,https://github.com/MIC-DKFZ/napari-sam,Karol Gotkowski,karol.gotkowski@dkfz.de,Apache-2.0,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'napari', 'vispy', 'tqdm', 'napari-nifti', 'superqt', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/MIC-DKFZ/napari-sam/issues', 'Documentation, https://github.com/MIC-DKFZ/napari-sam#README.md', 'Source Code, https://github.com/MIC-DKFZ/napari-sam', 'User Support, https://github.com/MIC-DKFZ/napari-sam/issues']",['testing'],False,0.4.6,conda-forge/napari-sam/0.4.6,0.4.7,conda-forge/napari-sam/0.4.7,0.4.9,conda-forge/napari-sam/0.4.9,conda,noarch/napari-sam-0.4.6-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['magicgui', 'napari', 'napari-nifti', 'numpy', 'python >=3.8', 'pytorch >=1.7', 'qtpy', 'segment-anything', 'superqt', 'torchvision >=0.8', 'tqdm', 'vispy']",pyhd8ed1ab_0,1690335169912.0,None-any-None,noarch,2023-07-26 01:36:25.972000+00:00,3790b5d849ccca7564da69f049c759f8,de6c011ee14f1d458c91587e27c789f7ceac2a51a413b37dff1ba8ae99f63c08,27537.0,conda-forge/napari-sam/0.4.6/noarch/napari-sam-0.4.6-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-sam/0.4.6/noarch/napari-sam-0.4.6-pyhd8ed1ab_0.conda,conda,0.4.6,conda-forge,['main'],conda,noarch/napari-sam-0.4.7-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['magicgui', 'napari', 'napari-nifti', 'numpy', 'python >=3.8', 'pytorch >=1.7', 'qtpy', 'segment-anything', 'superqt', 'torchvision >=0.8', 'tqdm', 'vispy']",noarch,1690336538386.0,None-any-None,pyhd8ed1ab_0,2023-07-26 01:58:41.426000+00:00,530a215b5bdce0b523777b306198e9f3,8bd7aa59e3af883816dd3cee2ada2fe814c3bab256bfec8e7e0a1223a560d7e6,27816.0,conda-forge/napari-sam/0.4.7/noarch/napari-sam-0.4.7-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-sam/0.4.7/noarch/napari-sam-0.4.7-pyhd8ed1ab_0.conda,conda,0.4.7,conda-forge,['main'],conda,noarch/napari-sam-0.4.9-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['magicgui', 'napari', 'napari-nifti', 'numpy', 'python >=3.8', 'pytorch >=1.7', 'qtpy', 'segment-anything', 'superqt', 'torchvision >=0.8', 'tqdm', 'vispy']",Apache-2.0,python,1690337762427.0,2023-07-26 02:19:42.225000+00:00,422c8b80e7ee280dbfc21df440ae6081,a1f3a1b0f1f7b8de078aaa8ddea1c2479afecdd8c6bd5618bff73ccc769ec00a,27755.0,conda-forge/napari-sam/0.4.9/noarch/napari-sam-0.4.9-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-sam/0.4.9/noarch/napari-sam-0.4.9-pyhd8ed1ab_0.conda,conda,0.4.9,conda-forge,['main'],,,,,,,,,,,napari-sam.make_qwidget,Segment Anything,False,,,,,,,,,,,,,,,,,,,,,,,0.4.11,conda-forge/napari-sam/0.4.11,0.4.12,conda-forge/napari-sam/0.4.12,0.4.13,conda-forge/napari-sam/0.4.13,conda,noarch/napari-sam-0.4.11-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['magicgui', 'napari', 'napari-nifti', 'numpy', 'python >=3.8', 'pytorch >=1.7', 'qtpy', 'segment-anything', 'superqt', 'torchvision >=0.8', 'tqdm', 'vispy']",noarch,1690341344492.0,None-any-None,pyhd8ed1ab_0,2023-07-26 03:19:28.658000+00:00,de5693f10a563006ed48f6a4934003fa,ada2f5cc1962f7b7dd5d9478c279050a8716332cebc008cd3bb0299d3501ff8f,27821.0,conda-forge/napari-sam/0.4.11/noarch/napari-sam-0.4.11-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-sam/0.4.11/noarch/napari-sam-0.4.11-pyhd8ed1ab_0.conda,conda,0.4.11,conda-forge,['main'],conda,noarch/napari-sam-0.4.12-pyh9208f05_0.conda,0.0,Apache-2.0,False,python,"['magicgui', 'napari', 'napari-nifti', 'numpy', 'python >=3.8', 'pytorch >=1.7', 'qtpy', 'segment-anything', 'superqt', 'torchvision >=0.8', 'tqdm', 'vispy']",noarch,1690341986389.0,None-any-None,pyh9208f05_0,2023-07-26 03:30:18.622000+00:00,fc6f259ecb56c6ff2ffdfdba79f0d89d,985ffba74f1ebb2ac7b04634c0c5bee1829a5b1d58be7f60b11bfdec1f076097,27821.0,conda-forge/napari-sam/0.4.12/noarch/napari-sam-0.4.12-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-sam/0.4.12/noarch/napari-sam-0.4.12-pyh9208f05_0.conda,conda,0.4.12,conda-forge,['main'],conda,noarch/napari-sam-0.4.13-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['napari', 'napari-nifti', 'numpy', 'python >=3.8', 'pytorch >=1.7', 'qtpy', 'segment-anything', 'superqt', 'torchvision >=0.8', 'tqdm', 'vispy']",Apache-2.0,python,1691094953234.0,2023-08-03 20:38:43.717000+00:00,b7ee7761145374645d7e1829f91a56e8,877d22d311289e5774735551c488e01df6c035c2a0d7e2457bc2f3db8d75f91f,27051.0,conda-forge/napari-sam/0.4.13/noarch/napari-sam-0.4.13-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-sam/0.4.13/noarch/napari-sam-0.4.13-pyh9208f05_0.conda,conda,0.4.13,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +321,napari-SAM4IS,0.0.6,napari-SAM4IS,Create annotations for instance segmentation using Segment Anything models,Hiroki Kawai,Apache-2.0,https://github.com/hiroalchem/napari-SAM4IS,6455551cf844c85bdd3fae7c,['conda'],,https://github.com/hiroalchem/napari-SAM4IS,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-sam4is,http://api.anaconda.org/packages/conda-forge/napari-sam4is,http://anaconda.org/conda-forge/napari-sam4is,"['0.0.4', '0.0.5', '0.0.6']",0.0.6,0.0.6,['noarch'],7.0,https://github.com/hiroalchem/napari-SAM4IS,['pyhd8ed1ab_0'],0.0.4,conda-forge/napari-sam4is/0.0.4,1.0,0.0,2023-05-05 19:12:26.122000+00:00,2023-12-08 21:42:49.595000+00:00,conda,noarch/napari-sam4is-0.0.4-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'pytorch', 'qtpy', 'scikit-image', 'segment-anything', 'torchvision']",noarch,1683313789297.0,None-any-None,pyhd8ed1ab_0,2023-05-05 19:12:26.415000+00:00,87907cca4dcafed8614674c67ce647db,d449da948888da9b455d4eef8f73d7189c4466dd2fa60b4eed01c92941191e3e,18424.0,conda-forge/napari-sam4is/0.0.4/noarch/napari-sam4is-0.0.4-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-sam4is/0.0.4/noarch/napari-sam4is-0.0.4-pyhd8ed1ab_0.conda,conda,0.0.4,conda-forge,['main'],public,,0.2.1,napari-SAM4IS.make_sam_widget,Make SAM Widget,napari_sam4is._widget:SAMWidget,,,,2.1,napari-SAM4IS,0.0.6,,Create annotations for instance segmentation using Segment Anything models,"# napari-SAM4IS [![License Apache Software License 2.0](https://img.shields.io/pypi/l/napari-SAM4IS.svg?color=green)](https://github.com/hiroalchem/napari-SAM4IS/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-SAM4IS.svg?color=green)](https://pypi.org/project/napari-SAM4IS) @@ -32165,8 +33428,162 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/hiroalchem/napari-SAM4IS,Hiroki Kawai,h.kawai888@gmail.com,Apache-2.0,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'torch', 'torchvision', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/hiroalchem/napari-SAM4IS/issues', 'Documentation, https://github.com/hiroalchem/napari-SAM4IS#README.md', 'Source Code, https://github.com/hiroalchem/napari-SAM4IS', 'User Support, https://github.com/hiroalchem/napari-SAM4IS/issues']",['testing'],False,0.0.5,conda-forge/napari-sam4is/0.0.5,0.0.6,conda-forge/napari-sam4is/0.0.6,,,conda,noarch/napari-sam4is-0.0.5-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'pytorch', 'qtpy', 'scikit-image', 'segment-anything', 'torchvision']",pyhd8ed1ab_0,1689270076498.0,None-any-None,noarch,2023-07-13 17:44:50.573000+00:00,072aa7576471377092543001a2c7d34f,a61670837d76a7c0452b50fcc410ca9c3482eb2a8d15fae3e918c4d0e8a64d8a,19115.0,conda-forge/napari-sam4is/0.0.5/noarch/napari-sam4is-0.0.5-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-sam4is/0.0.5/noarch/napari-sam4is-0.0.5-pyhd8ed1ab_0.conda,conda,0.0.5,conda-forge,['main'],conda,noarch/napari-sam4is-0.0.6-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'pytorch', 'qtpy', 'scikit-image', 'segment-anything', 'torchvision']",noarch,1702071585814.0,None-any-None,pyhd8ed1ab_0,2023-12-08 21:42:47.967000+00:00,507c39013324db2ab90b9b36591b89e8,5601c0367ed4f2eb0a1a58a56376454ed832f22acf55859a20b4a0c4cc99250e,19344.0,conda-forge/napari-sam4is/0.0.6/noarch/napari-sam4is-0.0.6-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-sam4is/0.0.6/noarch/napari-sam4is-0.0.6-pyhd8ed1ab_0.conda,conda,0.0.6,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-SAM4IS.make_sam_widget,SAM Widget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -309,napari-save-transformed,0.0.2,napari-save-transformed,Napari plugin to save layers with their transforms applied.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-save-transformed.write_transformed_layers,Save transformed layers as tiff,napari_save_transformed:write_transformed_layers,,,,2.3,napari-save-transformed,0.0.2,,Napari plugin to save layers with their transforms applied.,"# napari-save-transformed +",text/markdown,https://github.com/hiroalchem/napari-SAM4IS,Hiroki Kawai,h.kawai888@gmail.com,Apache-2.0,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'torch', 'torchvision', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/hiroalchem/napari-SAM4IS/issues', 'Documentation, https://github.com/hiroalchem/napari-SAM4IS#README.md', 'Source Code, https://github.com/hiroalchem/napari-SAM4IS', 'User Support, https://github.com/hiroalchem/napari-SAM4IS/issues']",['testing'],False,0.0.5,conda-forge/napari-sam4is/0.0.5,0.0.6,conda-forge/napari-sam4is/0.0.6,,,conda,noarch/napari-sam4is-0.0.5-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'pytorch', 'qtpy', 'scikit-image', 'segment-anything', 'torchvision']",pyhd8ed1ab_0,1689270076498.0,None-any-None,noarch,2023-07-13 17:44:50.573000+00:00,072aa7576471377092543001a2c7d34f,a61670837d76a7c0452b50fcc410ca9c3482eb2a8d15fae3e918c4d0e8a64d8a,19115.0,conda-forge/napari-sam4is/0.0.5/noarch/napari-sam4is-0.0.5-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-sam4is/0.0.5/noarch/napari-sam4is-0.0.5-pyhd8ed1ab_0.conda,conda,0.0.5,conda-forge,['main'],conda,noarch/napari-sam4is-0.0.6-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'pytorch', 'qtpy', 'scikit-image', 'segment-anything', 'torchvision']",noarch,1702071585814.0,None-any-None,pyhd8ed1ab_0,2023-12-08 21:42:47.967000+00:00,507c39013324db2ab90b9b36591b89e8,5601c0367ed4f2eb0a1a58a56376454ed832f22acf55859a20b4a0c4cc99250e,19344.0,conda-forge/napari-sam4is/0.0.6/noarch/napari-sam4is-0.0.6-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-sam4is/0.0.6/noarch/napari-sam4is-0.0.6-pyhd8ed1ab_0.conda,conda,0.0.6,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-SAM4IS.make_sam_widget,SAM Widget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +322,napari-SAMV2,0.0.5,Segment Anything V2,Napari plugin for segment anything version 2 model from meta. Plugin primarily useful for segmenting 3d volumetric data or 3d time series data. ,Krishnan Venkataraman," +Copyright (c) 2024, Krishnan Venkataraman +All rights reserved. + +Redistribution and use in source and binary forms, with or without +modification, are permitted provided that the following conditions are met: + +* Redistributions of source code must retain the above copyright notice, this + list of conditions and the following disclaimer. + +* Redistributions in binary form must reproduce the above copyright notice, + this list of conditions and the following disclaimer in the documentation + and/or other materials provided with the distribution. + +* Neither the name of copyright holder nor the names of its + contributors may be used to endorse or promote products derived from + this software without specific prior written permission. + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ""AS IS"" +AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE +IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE +DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE +FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL +DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR +SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER +CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, +OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE +OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. +",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-SAMV2.make_qwidget,SAM V2 plugin,napari_samv2:SAMV2_min,,,,2.1,napari-SAMV2,0.0.5,,Napari plugin for segment anything version 2 model from meta. Plugin primarily useful for segmenting 3d volumetric data or 3d time series data. ,"# napari-SAMV2 + +Napari plugin to use segment anything version 2 models from Meta. + +Plugin primarily made for segmenting 3d volumetric data or 3d time series data. + +---------------------------------- + + +## Installation + +Pre-requisite of samv2 installation needed: --- Our current plugin supports only sam v 2.0 not 2.1. So, we need to pull the SAM repo around september 15 ,2024 (last update of SAM2.0) + + git clone https://github.com/facebookresearch/segment-anything-2.git + cd segment-anything-2 + git rev-list -n 1 --before=""2024-09-15"" HEAD + git checkout + pip install -e . + +You can install `napari-SAMV2` via [pip]: + + pip install napari-SAMV2 + +****** + +The plugin and installation tested with python 3.10 in conda environment with pytorch-cuda=12.1 + +conda environment with example : + + conda create -n samv2_env python=3.10 + conda activate samv2_env + conda install pytorch torchvision torchaudio pytorch-cuda=12.1 -c pytorch -c nvidia + python -m pip install ""napari[all]"" + + git clone https://github.com/facebookresearch/segment-anything-2.git + cd segment-anything-2 + git rev-list -n 1 --before=""2024-09-15"" HEAD + + git checkout + pip install -e . + pip install napari-SAMV2 + +***** + +## Usage + +Middle mouse click - positive point + +Ctrl + Middle mouse click - negative point + +Time Series Segmentation : + +![samv2_time_series_demo](https://github.com/user-attachments/assets/078ca2bb-3016-4257-ac7c-c3cde8f9d125) + + + +Volume Segmentation : + +![samv2_volume_segmentation](https://github.com/user-attachments/assets/af05fcc4-a60d-44e8-ae05-70764d96e828) + + + +Reference : + +Example Data from in demo videos from, +Cell tracking challenge - https://celltrackingchallenge.net/ +FlyEM project - https://www.janelia.org/project-team/flyem/hemibrain + + +## License + +Distributed under the terms of the [BSD-3] license, +""napari-SAMV2"" is free and open source software + + + +## Issues + +If you encounter any problems, please [file an issue] along with a detailed description. + +[napari]: https://github.com/napari/napari +[Cookiecutter]: https://github.com/audreyr/cookiecutter +[@napari]: https://github.com/napari +[MIT]: http://opensource.org/licenses/MIT +[BSD-3]: http://opensource.org/licenses/BSD-3-Clause +[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt +[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt +[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0 +[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt +[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin + +[file an issue]: https://github.com/Krishvraman/napari-SAMV2/issues + +[napari]: https://github.com/napari/napari +[tox]: https://tox.readthedocs.io/en/latest/ +[pip]: https://pypi.org/project/pip/ +[PyPI]: https://pypi.org/ +",text/markdown,,Krishnan Venkataraman,krishvraman95@gmail.com," +Copyright (c) 2024, Krishnan Venkataraman +All rights reserved. + +Redistribution and use in source and binary forms, with or without +modification, are permitted provided that the following conditions are met: + +* Redistributions of source code must retain the above copyright notice, this + list of conditions and the following disclaimer. + +* Redistributions in binary form must reproduce the above copyright notice, + this list of conditions and the following disclaimer in the documentation + and/or other materials provided with the distribution. + +* Neither the name of copyright holder nor the names of its + contributors may be used to endorse or promote products derived from + this software without specific prior written permission. + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ""AS IS"" +AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE +IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE +DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE +FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL +DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR +SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER +CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, +OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE +OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""', 'numpy; extra == ""testing""']",>=3.9,"['Bug Tracker, https://github.com/Krishvraman/napari-SAMV2/issues', 'Documentation, https://github.com/Krishvraman/napari-SAMV2#README.md', 'Source Code, https://github.com/Krishvraman/napari-SAMV2', 'User Support, https://github.com/Krishvraman/napari-SAMV2/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation']",,,,,,,,,,napari-SAMV2.make_qwidget,SAMV2,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +323,napari-save-transformed,0.0.2,napari-save-transformed,Napari plugin to save layers with their transforms applied.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-save-transformed.write_transformed_layers,Save transformed layers as tiff,napari_save_transformed:write_transformed_layers,,,,2.3,napari-save-transformed,0.0.2,,Napari plugin to save layers with their transforms applied.,"# napari-save-transformed [![PyPI - Version](https://img.shields.io/pypi/v/napari-save-transformed.svg)](https://pypi.org/project/napari-save-transformed) [![PyPI - Python Version](https://img.shields.io/pypi/pyversions/napari-save-transformed.svg)](https://pypi.org/project/napari-save-transformed) @@ -32187,8 +33604,8 @@ pip install napari-save-transformed ## License `napari-save-transformed` is distributed under the terms of the [BSD-3-Clause](https://spdx.org/licenses/BSD-3-Clause.html) license. -",text/markdown,,,Jan Eglinger ,,"['Development Status :: 4 - Beta', 'Framework :: napari', 'Programming Language :: Python', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Programming Language :: Python :: Implementation :: CPython', 'Programming Language :: Python :: Implementation :: PyPy']",['napari'],>=3.9,"['Documentation, https://github.com/fmi-faim/napari-save-transformed#readme', 'Issues, https://github.com/fmi-faim/napari-save-transformed/issues', 'Source, https://github.com/fmi-faim/napari-save-transformed']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-save-transformed.write_transformed_layers,['image+'],Images with transformation (padded),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['.tif'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -310,napari-sc3D-viewer,1.1.0,sc3D Viewer,A plugin to visualize 3D single cell omics,Leo Guignard,MIT,https://github.com/GuignardLab/napari-sc3D-viewer,62fe5642f12c4ea79e67a5e5,['conda'],,https://github.com/GuignardLab/napari-sc3D-viewer,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-sc3d-viewer,http://api.anaconda.org/packages/conda-forge/napari-sc3d-viewer,http://anaconda.org/conda-forge/napari-sc3d-viewer,"['0.1.0', '0.2.0', '0.3.1', '1.0.0']",0.3.1,1.0.0,['noarch'],6.0,https://github.com/GuignardLab/napari-sc3D-viewer,['pyhd8ed1ab_0'],0.1.0,conda-forge/napari-sc3d-viewer/0.1.0,1.0,0.0,2022-08-18 15:09:51.977000+00:00,2023-07-27 22:43:57.536000+00:00,conda,noarch/napari-sc3d-viewer-0.1.0-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'pyqt', 'python >=3.8', 'qtpy', 'sc-3d']",noarch,1660835249102.0,None-any-None,pyhd8ed1ab_0,2022-08-18 15:09:52.388000+00:00,77510a19045168cefb7e66b5f03eb516,11beb442264de8f65e10f3797e83fed962229318d4374086b6ab3201807590f3,22885.0,conda-forge/napari-sc3d-viewer/0.1.0/noarch/napari-sc3d-viewer-0.1.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-sc3d-viewer/0.1.0/noarch/napari-sc3d-viewer-0.1.0-pyhd8ed1ab_0.tar.bz2,conda,0.1.0,conda-forge,['main'],public,,0.2.1,napari-sc3D-viewer.load_atlas,Make sc3D Viewer Widget,napari_sc3d_viewer._widget_load:LoadAtlas,,,,2.1,napari-sc3D-viewer,1.1.0,,A plugin to visualize 3D single cell omics,"# napari-sc3D-viewer +",text/markdown,,,Jan Eglinger ,,"['Development Status :: 4 - Beta', 'Framework :: napari', 'Programming Language :: Python', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Programming Language :: Python :: Implementation :: CPython', 'Programming Language :: Python :: Implementation :: PyPy']",['napari'],>=3.9,"['Documentation, https://github.com/fmi-faim/napari-save-transformed#readme', 'Issues, https://github.com/fmi-faim/napari-save-transformed/issues', 'Source, https://github.com/fmi-faim/napari-save-transformed']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-save-transformed.write_transformed_layers,['image+'],Images with transformation (padded),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['.tif'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +324,napari-sc3D-viewer,1.1.0,sc3D Viewer,A plugin to visualize 3D single cell omics,Leo Guignard,MIT,https://github.com/GuignardLab/napari-sc3D-viewer,62fe5642f12c4ea79e67a5e5,['conda'],,https://github.com/GuignardLab/napari-sc3D-viewer,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-sc3d-viewer,http://api.anaconda.org/packages/conda-forge/napari-sc3d-viewer,http://anaconda.org/conda-forge/napari-sc3d-viewer,"['0.1.0', '0.2.0', '0.3.1', '1.0.0']",0.3.1,1.0.0,['noarch'],6.0,https://github.com/GuignardLab/napari-sc3D-viewer,['pyhd8ed1ab_0'],0.1.0,conda-forge/napari-sc3d-viewer/0.1.0,1.0,0.0,2022-08-18 15:09:51.977000+00:00,2023-07-27 22:43:57.536000+00:00,conda,noarch/napari-sc3d-viewer-0.1.0-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'pyqt', 'python >=3.8', 'qtpy', 'sc-3d']",noarch,1660835249102.0,None-any-None,pyhd8ed1ab_0,2022-08-18 15:09:52.388000+00:00,77510a19045168cefb7e66b5f03eb516,11beb442264de8f65e10f3797e83fed962229318d4374086b6ab3201807590f3,22885.0,conda-forge/napari-sc3d-viewer/0.1.0/noarch/napari-sc3d-viewer-0.1.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-sc3d-viewer/0.1.0/noarch/napari-sc3d-viewer-0.1.0-pyhd8ed1ab_0.tar.bz2,conda,0.1.0,conda-forge,['main'],public,,0.2.1,napari-sc3D-viewer.load_atlas,Make sc3D Viewer Widget,napari_sc3d_viewer._widget_load:LoadAtlas,,,,2.1,napari-sc3D-viewer,1.1.0,,A plugin to visualize 3D single cell omics,"# napari-sc3D-viewer [![License](https://img.shields.io/pypi/l/napari-sc3D-viewer.svg?color=green)](https://raw.githubusercontent.com/GuignardLab/napari-sc3D-viewer/main/LICENSE) [![Python Version](https://img.shields.io/pypi/pyversions/napari-sc3D-viewer.svg?color=green)](https://python.org) @@ -32440,8 +33857,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [scanpy]: https://scanpy.readthedocs.io/en/latest/index.html [anndata]: https://anndata.readthedocs.io/en/latest/ [conda]: https://conda.io -",text/markdown,https://github.com/GuignardLab/napari-sc3D-viewer,Leo Guignard,leo.guignard@univ-amu.fr,MIT,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['numpy', 'magicgui', 'qtpy', 'sc-3D', 'matplotlib', ""pyvista ; extra == 'pyvista'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/GuignardLab/napari-sc3D-viewer/issues', 'Documentation, https://github.com/GuignardLab/napari-sc3D-viewer#README.md', 'Source Code, https://github.com/GuignardLab/napari-sc3D-viewer', 'User Support, https://github.com/GuignardLab/napari-sc3D-viewer/issues', 'Twitter, https://twitter.com/guignardlab']","['pyvista', 'testing']",False,0.2.0,conda-forge/napari-sc3d-viewer/0.2.0,0.3.1,conda-forge/napari-sc3d-viewer/0.3.1,1.0.0,conda-forge/napari-sc3d-viewer/1.0.0,conda,noarch/napari-sc3d-viewer-0.2.0-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'sc-3d']",pyhd8ed1ab_0,1669395314079.0,None-any-None,noarch,2022-11-25 16:57:29.517000+00:00,577653d62451e96f9c6b68b1dcc24717,aac721eb6bf05c9b7ce02470b0e0d860612ffeeaad04c035d9c41311cd318ee8,25231.0,conda-forge/napari-sc3d-viewer/0.2.0/noarch/napari-sc3d-viewer-0.2.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-sc3d-viewer/0.2.0/noarch/napari-sc3d-viewer-0.2.0-pyhd8ed1ab_0.conda,conda,0.2.0,conda-forge,['main'],conda,noarch/napari-sc3d-viewer-0.3.1-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'sc-3d']",noarch,1682251825437.0,None-any-None,pyhd8ed1ab_0,2023-04-23 12:12:31.665000+00:00,ca5b0e8c6cb4c4c6193dd9ff1ab12163,b534011233a90945b46b1f67fa16fee03efd17789797ae29192edb70e62a466f,28249.0,conda-forge/napari-sc3d-viewer/0.3.1/noarch/napari-sc3d-viewer-0.3.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-sc3d-viewer/0.3.1/noarch/napari-sc3d-viewer-0.3.1-pyhd8ed1ab_0.conda,conda,0.3.1,conda-forge,['main'],conda,noarch/napari-sc3d-viewer-1.0.0-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'sc-3d']",MIT,python,1690497662954.0,2023-07-27 22:43:56.117000+00:00,55d13f9bba0f2227d0db901ffa355278,f8b04a34118d929e630973e3dc23ad05da3548a0adfa78aa510d72cc70a4ef8a,28372.0,conda-forge/napari-sc3d-viewer/1.0.0/noarch/napari-sc3d-viewer-1.0.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-sc3d-viewer/1.0.0/noarch/napari-sc3d-viewer-1.0.0-pyhd8ed1ab_0.conda,conda,1.0.0,conda-forge,['main'],,napari-sc3D-viewer.register_sc3D,Make sc3D Viewer Widget,napari_sc3d_viewer._widget_register:RegisterSc3D,,,,,,,napari-sc3D-viewer.load_atlas,Load spatial single cell,False,napari-sc3D-viewer.register_sc3D,Register spatial single cell,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -311,napari-script-editor,0.2.10,napari-script-editor,A python script editor for napari,Robert Haase,BSD-3-Clause,https://github.com/haesleinhuepf/napari-script-editor,620a209aa3c32938bdbcea05,['conda'],,https://github.com/haesleinhuepf/napari-script-editor,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-script-editor,http://api.anaconda.org/packages/conda-forge/napari-script-editor,http://anaconda.org/conda-forge/napari-script-editor,"['0.2.7', '0.2.8', '0.2.9', '0.2.10']",0.2.9,0.2.10,['noarch'],6.0,,['pyhd8ed1ab_0'],0.2.7,conda-forge/napari-script-editor/0.2.7,1.0,0.0,2022-02-14 09:27:52.479000+00:00,2023-07-08 20:11:44.949000+00:00,conda,noarch/napari-script-editor-0.2.7-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['haesleinhuepf-pyqode.core >=2.15.5', 'haesleinhuepf-pyqode.python >=2.15.2', 'jedi >=0.18.0', 'napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'python >=3.7']",noarch,1644830715689.0,None-any-None,pyhd8ed1ab_0,2022-02-14 09:27:52.792000+00:00,22de8f5aa75a099b34f1891069463aad,None,10922.0,conda-forge/napari-script-editor/0.2.7/noarch/napari-script-editor-0.2.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-script-editor/0.2.7/noarch/napari-script-editor-0.2.7-pyhd8ed1ab_0.tar.bz2,conda,0.2.7,conda-forge,['main'],public,,0.2.1,napari-script-editor.ScriptEditor,ScriptEditor,napari_script_editor._dock_widget:ScriptEditor,,,,2.1,napari-script-editor,0.2.10,,A python script editor for napari,"# napari-script-editor +",text/markdown,https://github.com/GuignardLab/napari-sc3D-viewer,Leo Guignard,leo.guignard@univ-amu.fr,MIT,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['numpy', 'magicgui', 'qtpy', 'sc-3D', 'matplotlib', ""pyvista ; extra == 'pyvista'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/GuignardLab/napari-sc3D-viewer/issues', 'Documentation, https://github.com/GuignardLab/napari-sc3D-viewer#README.md', 'Source Code, https://github.com/GuignardLab/napari-sc3D-viewer', 'User Support, https://github.com/GuignardLab/napari-sc3D-viewer/issues', 'Twitter, https://twitter.com/guignardlab']","['pyvista', 'testing']",False,0.2.0,conda-forge/napari-sc3d-viewer/0.2.0,0.3.1,conda-forge/napari-sc3d-viewer/0.3.1,1.0.0,conda-forge/napari-sc3d-viewer/1.0.0,conda,noarch/napari-sc3d-viewer-0.2.0-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'sc-3d']",pyhd8ed1ab_0,1669395314079.0,None-any-None,noarch,2022-11-25 16:57:29.517000+00:00,577653d62451e96f9c6b68b1dcc24717,aac721eb6bf05c9b7ce02470b0e0d860612ffeeaad04c035d9c41311cd318ee8,25231.0,conda-forge/napari-sc3d-viewer/0.2.0/noarch/napari-sc3d-viewer-0.2.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-sc3d-viewer/0.2.0/noarch/napari-sc3d-viewer-0.2.0-pyhd8ed1ab_0.conda,conda,0.2.0,conda-forge,['main'],conda,noarch/napari-sc3d-viewer-0.3.1-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'sc-3d']",noarch,1682251825437.0,None-any-None,pyhd8ed1ab_0,2023-04-23 12:12:31.665000+00:00,ca5b0e8c6cb4c4c6193dd9ff1ab12163,b534011233a90945b46b1f67fa16fee03efd17789797ae29192edb70e62a466f,28249.0,conda-forge/napari-sc3d-viewer/0.3.1/noarch/napari-sc3d-viewer-0.3.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-sc3d-viewer/0.3.1/noarch/napari-sc3d-viewer-0.3.1-pyhd8ed1ab_0.conda,conda,0.3.1,conda-forge,['main'],conda,noarch/napari-sc3d-viewer-1.0.0-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'sc-3d']",MIT,python,1690497662954.0,2023-07-27 22:43:56.117000+00:00,55d13f9bba0f2227d0db901ffa355278,f8b04a34118d929e630973e3dc23ad05da3548a0adfa78aa510d72cc70a4ef8a,28372.0,conda-forge/napari-sc3d-viewer/1.0.0/noarch/napari-sc3d-viewer-1.0.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-sc3d-viewer/1.0.0/noarch/napari-sc3d-viewer-1.0.0-pyhd8ed1ab_0.conda,conda,1.0.0,conda-forge,['main'],,napari-sc3D-viewer.register_sc3D,Make sc3D Viewer Widget,napari_sc3d_viewer._widget_register:RegisterSc3D,,,,,,,napari-sc3D-viewer.load_atlas,Load spatial single cell,False,napari-sc3D-viewer.register_sc3D,Register spatial single cell,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +325,napari-script-editor,0.2.10,napari-script-editor,A python script editor for napari,Robert Haase,BSD-3-Clause,https://github.com/haesleinhuepf/napari-script-editor,620a209aa3c32938bdbcea05,['conda'],,https://github.com/haesleinhuepf/napari-script-editor,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-script-editor,http://api.anaconda.org/packages/conda-forge/napari-script-editor,http://anaconda.org/conda-forge/napari-script-editor,"['0.2.7', '0.2.8', '0.2.9', '0.2.10']",0.2.9,0.2.10,['noarch'],6.0,,['pyhd8ed1ab_0'],0.2.7,conda-forge/napari-script-editor/0.2.7,1.0,0.0,2022-02-14 09:27:52.479000+00:00,2023-07-08 20:11:44.949000+00:00,conda,noarch/napari-script-editor-0.2.7-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['haesleinhuepf-pyqode.core >=2.15.5', 'haesleinhuepf-pyqode.python >=2.15.2', 'jedi >=0.18.0', 'napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'python >=3.7']",noarch,1644830715689.0,None-any-None,pyhd8ed1ab_0,2022-02-14 09:27:52.792000+00:00,22de8f5aa75a099b34f1891069463aad,None,10922.0,conda-forge/napari-script-editor/0.2.7/noarch/napari-script-editor-0.2.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-script-editor/0.2.7/noarch/napari-script-editor-0.2.7-pyhd8ed1ab_0.tar.bz2,conda,0.2.7,conda-forge,['main'],public,,0.2.1,napari-script-editor.ScriptEditor,ScriptEditor,napari_script_editor._dock_widget:ScriptEditor,,,,2.1,napari-script-editor,0.2.10,,A python script editor for napari,"# napari-script-editor [![License](https://img.shields.io/pypi/l/napari-script-editor.svg?color=green)](https://github.com/haesleinhuepf/napari-script-editor/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-script-editor.svg?color=green)](https://pypi.org/project/napari-script-editor) @@ -32543,8 +33960,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/haesleinhuepf/napari-script-editor,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Text Editors :: Integrated Development Environments (IDE)', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari', 'haesleinhuepf-pyqode.core (>=2.15.5)', 'haesleinhuepf-pyqode.python (>=2.15.2)', 'napari-tools-menu', 'jedi (>=0.18.0)', 'pyflakes (<=2.4.0)', 'imageio (!=2.22.1)']",>=3.7,"['Bug Tracker, https://github.com/haesleinhuepf/napari-script-editor/issues', 'Documentation, https://github.com/haesleinhuepf/napari-script-editor#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-script-editor', 'User Support, https://github.com/haesleinhuepf/napari-script-editor/issues']",,True,0.2.8,conda-forge/napari-script-editor/0.2.8,0.2.9,conda-forge/napari-script-editor/0.2.9,0.2.10,conda-forge/napari-script-editor/0.2.10,conda,noarch/napari-script-editor-0.2.8-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['haesleinhuepf-pyqode.core >=2.15.5', 'haesleinhuepf-pyqode.python >=2.15.2', 'jedi >=0.18.0', 'napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'python >=3.7']",pyhd8ed1ab_0,1647791318175.0,None-any-None,noarch,2022-03-20 15:51:23.598000+00:00,3bf061c278c537d2c17cc3d4eb029976,None,11029.0,conda-forge/napari-script-editor/0.2.8/noarch/napari-script-editor-0.2.8-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-script-editor/0.2.8/noarch/napari-script-editor-0.2.8-pyhd8ed1ab_0.tar.bz2,conda,0.2.8,conda-forge,['main'],conda,noarch/napari-script-editor-0.2.9-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['haesleinhuepf-pyqode.core >=2.15.5', 'haesleinhuepf-pyqode.python >=2.15.2', 'imageio !=2.22.1', 'jedi >=0.18.0', 'napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'pyflakes <=2.4.0', 'python >=3.7']",noarch,1665063285562.0,None-any-None,pyhd8ed1ab_0,2022-10-06 13:37:10.199000+00:00,0be6f88b9a5c4c44ca601ab6b172acb1,None,11330.0,conda-forge/napari-script-editor/0.2.9/noarch/napari-script-editor-0.2.9-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-script-editor/0.2.9/noarch/napari-script-editor-0.2.9-pyhd8ed1ab_0.tar.bz2,conda,0.2.9,conda-forge,['main'],conda,noarch/napari-script-editor-0.2.10-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['haesleinhuepf-pyqode.core >=2.15.5', 'haesleinhuepf-pyqode.python >=2.15.2', 'imageio !=2.22.1', 'jedi >=0.18.0', 'napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'pyflakes <=2.4.0', 'python >=3.7']",BSD-3-Clause,python,1688846986838.0,2023-07-08 20:11:43.445000+00:00,73c6b0a2e3782fff6b679342a46e39ce,99267f7be2f0851866ad1ea6b56882c83c587e438acbad983a4eccc3b31683b2,14272.0,conda-forge/napari-script-editor/0.2.10/noarch/napari-script-editor-0.2.10-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-script-editor/0.2.10/noarch/napari-script-editor-0.2.10-pyhd8ed1ab_0.conda,conda,0.2.10,conda-forge,['main'],,,,,,,,,,,napari-script-editor.ScriptEditor,ScriptEditor,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -312,napari-sdeconv,1.0.1,napari sdeconv,2D and 3D deconvolution,Sylvain Prigent,BSD-3-Clause,https://github.com/sylvainprigent/napari-sdeconv,620937ee8d5f589364e9307f,['conda'],,https://github.com/sylvainprigent/napari-sdeconv,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-sdeconv,http://api.anaconda.org/packages/conda-forge/napari-sdeconv,http://anaconda.org/conda-forge/napari-sdeconv,['0.1.0'],0.1.0,0.1.0,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.0,conda-forge/napari-sdeconv/0.1.0,1.0,0.0,2022-02-13 16:55:08.608000+00:00,2023-06-18 08:40:51.148000+00:00,conda,noarch/napari-sdeconv-0.1.0-pyhd8ed1ab_0.tar.bz2,0.0,GPL-3.0-only,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.9', 'sdeconv >=0.1.0']",noarch,1644771146572.0,None-any-None,pyhd8ed1ab_0,2022-02-13 16:55:08.871000+00:00,cf0a868f83925df16b1f351e966ab0f5,None,27832.0,conda-forge/napari-sdeconv/0.1.0/noarch/napari-sdeconv-0.1.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-sdeconv/0.1.0/noarch/napari-sdeconv-0.1.0-pyhd8ed1ab_0.tar.bz2,conda,0.1.0,conda-forge,['main'],public,,0.2.1,napari-sdeconv.make_sample_data,Load sample data from napari sdeconv,napari_sdeconv._sample_data:make_sample_data,,,,2.1,napari-sdeconv,1.0.1,,2D and 3D deconvolution,"# napari-sdeconv +",text/markdown,https://github.com/haesleinhuepf/napari-script-editor,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Text Editors :: Integrated Development Environments (IDE)', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari', 'haesleinhuepf-pyqode.core (>=2.15.5)', 'haesleinhuepf-pyqode.python (>=2.15.2)', 'napari-tools-menu', 'jedi (>=0.18.0)', 'pyflakes (<=2.4.0)', 'imageio (!=2.22.1)']",>=3.7,"['Bug Tracker, https://github.com/haesleinhuepf/napari-script-editor/issues', 'Documentation, https://github.com/haesleinhuepf/napari-script-editor#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-script-editor', 'User Support, https://github.com/haesleinhuepf/napari-script-editor/issues']",,True,0.2.8,conda-forge/napari-script-editor/0.2.8,0.2.9,conda-forge/napari-script-editor/0.2.9,0.2.10,conda-forge/napari-script-editor/0.2.10,conda,noarch/napari-script-editor-0.2.8-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['haesleinhuepf-pyqode.core >=2.15.5', 'haesleinhuepf-pyqode.python >=2.15.2', 'jedi >=0.18.0', 'napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'python >=3.7']",pyhd8ed1ab_0,1647791318175.0,None-any-None,noarch,2022-03-20 15:51:23.598000+00:00,3bf061c278c537d2c17cc3d4eb029976,None,11029.0,conda-forge/napari-script-editor/0.2.8/noarch/napari-script-editor-0.2.8-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-script-editor/0.2.8/noarch/napari-script-editor-0.2.8-pyhd8ed1ab_0.tar.bz2,conda,0.2.8,conda-forge,['main'],conda,noarch/napari-script-editor-0.2.9-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['haesleinhuepf-pyqode.core >=2.15.5', 'haesleinhuepf-pyqode.python >=2.15.2', 'imageio !=2.22.1', 'jedi >=0.18.0', 'napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'pyflakes <=2.4.0', 'python >=3.7']",noarch,1665063285562.0,None-any-None,pyhd8ed1ab_0,2022-10-06 13:37:10.199000+00:00,0be6f88b9a5c4c44ca601ab6b172acb1,None,11330.0,conda-forge/napari-script-editor/0.2.9/noarch/napari-script-editor-0.2.9-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-script-editor/0.2.9/noarch/napari-script-editor-0.2.9-pyhd8ed1ab_0.tar.bz2,conda,0.2.9,conda-forge,['main'],conda,noarch/napari-script-editor-0.2.10-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['haesleinhuepf-pyqode.core >=2.15.5', 'haesleinhuepf-pyqode.python >=2.15.2', 'imageio !=2.22.1', 'jedi >=0.18.0', 'napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'pyflakes <=2.4.0', 'python >=3.7']",BSD-3-Clause,python,1688846986838.0,2023-07-08 20:11:43.445000+00:00,73c6b0a2e3782fff6b679342a46e39ce,99267f7be2f0851866ad1ea6b56882c83c587e438acbad983a4eccc3b31683b2,14272.0,conda-forge/napari-script-editor/0.2.10/noarch/napari-script-editor-0.2.10-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-script-editor/0.2.10/noarch/napari-script-editor-0.2.10-pyhd8ed1ab_0.conda,conda,0.2.10,conda-forge,['main'],,,,,,,,,,,napari-script-editor.ScriptEditor,ScriptEditor,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +326,napari-sdeconv,1.0.1,napari sdeconv,2D and 3D deconvolution,Sylvain Prigent,BSD-3-Clause,https://github.com/sylvainprigent/napari-sdeconv,620937ee8d5f589364e9307f,['conda'],,https://github.com/sylvainprigent/napari-sdeconv,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-sdeconv,http://api.anaconda.org/packages/conda-forge/napari-sdeconv,http://anaconda.org/conda-forge/napari-sdeconv,['0.1.0'],0.1.0,0.1.0,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.0,conda-forge/napari-sdeconv/0.1.0,1.0,0.0,2022-02-13 16:55:08.608000+00:00,2023-06-18 08:40:51.148000+00:00,conda,noarch/napari-sdeconv-0.1.0-pyhd8ed1ab_0.tar.bz2,0.0,GPL-3.0-only,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.9', 'sdeconv >=0.1.0']",noarch,1644771146572.0,None-any-None,pyhd8ed1ab_0,2022-02-13 16:55:08.871000+00:00,cf0a868f83925df16b1f351e966ab0f5,None,27832.0,conda-forge/napari-sdeconv/0.1.0/noarch/napari-sdeconv-0.1.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-sdeconv/0.1.0/noarch/napari-sdeconv-0.1.0-pyhd8ed1ab_0.tar.bz2,conda,0.1.0,conda-forge,['main'],public,,0.2.1,napari-sdeconv.make_sample_data,Load sample data from napari sdeconv,napari_sdeconv._sample_data:make_sample_data,,,,2.1,napari-sdeconv,1.0.1,,2D and 3D deconvolution,"# napari-sdeconv [![License BSD-3](https://img.shields.io/pypi/l/napari-sdeconv.svg?color=green)](https://github.com/sylvainprigent/napari-sdeconv/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-sdeconv.svg?color=green)](https://pypi.org/project/napari-sdeconv) @@ -32611,8 +34028,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/sylvainprigent/napari-sdeconv,Sylvain Prigent,meriadec.prigent@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['numpy', 'magicgui', 'qtpy', 'sdeconv (>=1.0.1)', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""sdeconv (>=1.0.1) ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/sylvainprigent/napari-sdeconv/issues', 'Documentation, https://github.com/sylvainprigent/napari-sdeconv#README.md', 'Source Code, https://github.com/sylvainprigent/napari-sdeconv', 'User Support, https://github.com/sylvainprigent/napari-sdeconv/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-sdeconv.wiener_widget,Wiener deconvolution,napari_sdeconv._sdeconv_widget:SWienerPlugin,napari-sdeconv.richardson_lucy_widget,Richardson-Lucy deconvolution,napari_sdeconv._sdeconv_widget:SRichardsonLucyPlugin,napari-sdeconv.spitfire_widget,Spitfire deconvolution,napari_sdeconv._sdeconv_widget:SpitfirePlugin,napari-sdeconv.gaussian_widget,PSF Gaussian,False,napari-sdeconv.gibson_lanni_widget,PSF Gibson-Lanni,False,napari-sdeconv.wiener_widget,Wiener deconvolution,False,napari-sdeconv.richardson_lucy_widget,Richardson-Lucy deconvolution,False,napari-sdeconv.gaussian_widget,PSF Gaussian,napari_sdeconv._spsf_widget:SGaussianPlugin,,,,,,,,napari-sdeconv.make_sample_data,unique_id.1,napari sdeconv,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-sdeconv.gibson_lanni_widget,PSF Gibson-Lanni,napari_sdeconv._spsf_widget:SGibsonLanniPlugin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-sdeconv.spitfire_widget,Spitfire deconvolution,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -313,napari-sediment,0.2.1,napari Sediment,A plugin to process hyperspectral images of sediments,Guillaume Witz,BSD-3-Clause,https://github.com/guiwitz/napari-sediment,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-sediment.get_reader,Open data with napari Sediment,napari_sediment.utilities._reader:napari_get_reader,napari-sediment.get_reader,"['*.hdr', '*.zarr']",True,2.1,napari-sediment,0.2.1,,A plugin to process hyperspectral images of sediments,"# napari-sediment +",text/markdown,https://github.com/sylvainprigent/napari-sdeconv,Sylvain Prigent,meriadec.prigent@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['numpy', 'magicgui', 'qtpy', 'sdeconv (>=1.0.1)', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""sdeconv (>=1.0.1) ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/sylvainprigent/napari-sdeconv/issues', 'Documentation, https://github.com/sylvainprigent/napari-sdeconv#README.md', 'Source Code, https://github.com/sylvainprigent/napari-sdeconv', 'User Support, https://github.com/sylvainprigent/napari-sdeconv/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-sdeconv.wiener_widget,Wiener deconvolution,napari_sdeconv._sdeconv_widget:SWienerPlugin,napari-sdeconv.richardson_lucy_widget,Richardson-Lucy deconvolution,napari_sdeconv._sdeconv_widget:SRichardsonLucyPlugin,napari-sdeconv.spitfire_widget,Spitfire deconvolution,napari_sdeconv._sdeconv_widget:SpitfirePlugin,napari-sdeconv.gaussian_widget,PSF Gaussian,False,napari-sdeconv.gibson_lanni_widget,PSF Gibson-Lanni,False,napari-sdeconv.wiener_widget,Wiener deconvolution,False,napari-sdeconv.richardson_lucy_widget,Richardson-Lucy deconvolution,False,napari-sdeconv.gaussian_widget,PSF Gaussian,napari_sdeconv._spsf_widget:SGaussianPlugin,,,,,,,,napari-sdeconv.make_sample_data,unique_id.1,napari sdeconv,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-sdeconv.gibson_lanni_widget,PSF Gibson-Lanni,napari_sdeconv._spsf_widget:SGibsonLanniPlugin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-sdeconv.spitfire_widget,Spitfire deconvolution,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +327,napari-sediment,0.2.3,napari Sediment,A plugin to process hyperspectral images of sediments,Guillaume Witz,BSD-3-Clause,https://github.com/guiwitz/napari-sediment,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-sediment.get_reader,Open data with napari Sediment,napari_sediment.utilities._reader:napari_get_reader,napari-sediment.get_reader,"['*.hdr', '*.zarr']",True,2.1,napari-sediment,0.2.3,,A plugin to process hyperspectral images of sediments,"# napari-sediment [![License BSD-3](https://img.shields.io/pypi/l/napari-sediment.svg?color=green)](https://github.com/guiwitz/napari-sediment/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-sediment.svg?color=green)](https://pypi.org/project/napari-sediment) @@ -32685,8 +34102,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/guiwitz/napari-sediment,Guillaume Witz,guillaume.witz@unibe.ch,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'zarr', 'magicgui', 'qtpy', 'napari-guitils', 'napari-convpaint', 'superqt', 'natsort', 'spectral', 'matplotlib', 'scikit-image', 'scikit-learn', 'PyYAML', 'microfilm', 'dask', 'distributed', 'tqdm', 'cmap', 'colour-science', 'torch; extra == ""classifier""', 'torchvision; extra == ""classifier""', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.9,"['Bug Tracker, https://github.com/guiwitz/napari-sediment/issues', 'Documentation, https://github.com/guiwitz/napari-sediment#README.md', 'Source Code, https://github.com/guiwitz/napari-sediment', 'User Support, https://github.com/guiwitz/napari-sediment/issues']","['classifier', 'testing']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-sediment.make_qwidget,Make Sediment QWidget,napari_sediment.widgets.sediment_widget:SedimentWidget,napari-sediment.make_hyperwidget,Make Hyperanalysis QWidget,napari_sediment.widgets.hyperanalysis_widget:HyperAnalysisWidget,napari-sediment.make_spectralindexwidget,Make Spectral Indices QWidget,napari_sediment.widgets.spectral_indices_widget:SpectralIndexWidget,napari-sediment.make_qwidget,Sediment,False,napari-sediment.make_hyperwidget,HyperAnalysis,False,napari-sediment.make_spectralindexwidget,SpectralIndices,False,napari-sediment.make_batchwidget,BatchIndex,False,napari-sediment.make_batchwidget,Make Batch Index QWidget,napari_sediment.widgets.batch_indices:BatchIndexWidget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-sediment.make_preproc_batchwidget,Make Batch Preprocess QWidget,napari_sediment.widgets.batch_preproc_widget:BatchPreprocWidget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-sediment.make_convertwidget,Make Convert QWidget,napari_sediment.widgets.convert_widget:ConvertWidget,,,,,,,,,,,,,,,,,napari-sediment.make_preproc_batchwidget,BatchPreproc,False,napari-sediment.make_convertwidget,Convert,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -314,napari-seedseg,0.0.2,SeedSeg Segmentation,A simple plugin for segmentation,Reza Akbarian Bafghi,BSD-3,https://github.com/rezaakb/napari-seedseg,64cb7a373b9b9a75ebc1c584,['conda'],,https://github.com/rezaakb/napari-seedseg,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-seedseg,http://api.anaconda.org/packages/conda-forge/napari-seedseg,http://anaconda.org/conda-forge/napari-seedseg,['0.0.2'],0.0.2,0.0.2,['noarch'],21.0,,['pyhd8ed1ab_0'],0.0.2,conda-forge/napari-seedseg/0.0.2,1.0,0.0,2023-08-01 18:18:34.796000+00:00,2023-08-03 09:58:15.881000+00:00,conda,noarch/napari-seedseg-0.0.2-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'opencv', 'python >=3.8', 'qtpy', 'scikit-image >=0.19.3']",noarch,1691056548917.0,None-any-None,pyhd8ed1ab_0,2023-08-03 09:58:13.638000+00:00,27b3dcc241332dd978f8e0afda29ac6e,2ab6a03b7c094f2fbdb5960ca08116336d0b8b1719d68b8f6f150a81e1aeb290,13619.0,conda-forge/napari-seedseg/0.0.2/noarch/napari-seedseg-0.0.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-seedseg/0.0.2/noarch/napari-seedseg-0.0.2-pyhd8ed1ab_0.conda,conda,0.0.2,conda-forge,['main'],public,,0.2.1,napari-seedseg.make_qwidget,SeedSeg,napari_seedseg._widget:SeedSegWidget,,,,2.1,napari_seedseg,0.0.2,,A simple plugin for segmentation,"# napari-seedseg +",text/markdown,https://github.com/guiwitz/napari-sediment,Guillaume Witz,guillaume.witz@unibe.ch,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy<2', 'zarr', 'magicgui', 'qtpy', 'napari-guitils', 'napari-convpaint', 'superqt', 'natsort', 'spectral', 'matplotlib', 'scikit-image', 'scikit-learn', 'PyYAML', 'microfilm', 'dask', 'distributed', 'tqdm', 'cmap', 'colour-science', 'torch; extra == ""classifier""', 'torchvision; extra == ""classifier""', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.9,"['Bug Tracker, https://github.com/guiwitz/napari-sediment/issues', 'Documentation, https://github.com/guiwitz/napari-sediment#README.md', 'Source Code, https://github.com/guiwitz/napari-sediment', 'User Support, https://github.com/guiwitz/napari-sediment/issues']","['classifier', 'testing']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-sediment.make_qwidget,Make Sediment QWidget,napari_sediment.widgets.sediment_widget:SedimentWidget,napari-sediment.make_hyperwidget,Make Hyperanalysis QWidget,napari_sediment.widgets.hyperanalysis_widget:HyperAnalysisWidget,napari-sediment.make_spectralindexwidget,Make Spectral Indices QWidget,napari_sediment.widgets.spectral_indices_widget:SpectralIndexWidget,napari-sediment.make_qwidget,Sediment,False,napari-sediment.make_hyperwidget,HyperAnalysis,False,napari-sediment.make_spectralindexwidget,SpectralIndices,False,napari-sediment.make_batchwidget,BatchIndex,False,napari-sediment.make_batchwidget,Make Batch Index QWidget,napari_sediment.widgets.batch_indices:BatchIndexWidget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-sediment.make_preproc_batchwidget,Make Batch Preprocess QWidget,napari_sediment.widgets.batch_preproc_widget:BatchPreprocWidget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-sediment.make_convertwidget,Make Convert QWidget,napari_sediment.widgets.convert_widget:ConvertWidget,napari-sediment.create_demo_data,Create demo data,napari_sediment.data.data_contribution:demo_data,,,,,,,,,,,napari-sediment.make_preproc_batchwidget,BatchPreproc,False,napari-sediment.make_convertwidget,Convert,False,napari-sediment.create_demo_data,Demo Data,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +328,napari-seedseg,0.0.2,SeedSeg Segmentation,A simple plugin for segmentation,Reza Akbarian Bafghi,BSD-3,https://github.com/rezaakb/napari-seedseg,64cb7a373b9b9a75ebc1c584,['conda'],,https://github.com/rezaakb/napari-seedseg,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-seedseg,http://api.anaconda.org/packages/conda-forge/napari-seedseg,http://anaconda.org/conda-forge/napari-seedseg,['0.0.2'],0.0.2,0.0.2,['noarch'],21.0,,['pyhd8ed1ab_0'],0.0.2,conda-forge/napari-seedseg/0.0.2,1.0,0.0,2023-08-01 18:18:34.796000+00:00,2023-08-03 09:58:15.881000+00:00,conda,noarch/napari-seedseg-0.0.2-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'opencv', 'python >=3.8', 'qtpy', 'scikit-image >=0.19.3']",noarch,1691056548917.0,None-any-None,pyhd8ed1ab_0,2023-08-03 09:58:13.638000+00:00,27b3dcc241332dd978f8e0afda29ac6e,2ab6a03b7c094f2fbdb5960ca08116336d0b8b1719d68b8f6f150a81e1aeb290,13619.0,conda-forge/napari-seedseg/0.0.2/noarch/napari-seedseg-0.0.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-seedseg/0.0.2/noarch/napari-seedseg-0.0.2-pyhd8ed1ab_0.conda,conda,0.0.2,conda-forge,['main'],public,,0.2.1,napari-seedseg.make_qwidget,SeedSeg,napari_seedseg._widget:SeedSegWidget,,,,2.1,napari_seedseg,0.0.2,,A simple plugin for segmentation,"# napari-seedseg [![License BSD-3](https://img.shields.io/pypi/l/napari-seedseg.svg?color=green)](https://github.com/rezaakb/napari-seedseg/tree/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-seedseg.svg?color=green)](https://pypi.org/project/napari-seedseg) @@ -32776,8 +34193,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/rezaakb/napari-seedseg,Reza Akbarian Bafghi,reza.akb98@gmail.com,BSD-3,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['napari', 'numpy', 'magicgui', 'qtpy', 'opencv-python-headless', 'scikit-image>=0.19.3', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.8,"['Bug Tracker, https://github.com/rezaakb/napari-seedseg/issues', 'Documentation, https://github.com/rezaakb/napari-seedseg#README.md', 'Source Code, https://github.com/rezaakb/napari-seedseg', 'User Support, https://github.com/rezaakb/napari-seedseg/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-seedseg.make_qwidget,SeedSeg,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -315,napari-segment,0.3.12,Segment organoid,Segment organoids and measure intensities,Andrey Aristov,BSD-3-Clause,https://github.com/aaristov/napari-segment,644528cd12ab8ac4c6b9c6f9,['conda'],,https://github.com/aaristov/napari-segment,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-segment,http://api.anaconda.org/packages/conda-forge/napari-segment,http://anaconda.org/conda-forge/napari-segment,"['0.3.9', '0.3.12']",0.3.9,0.3.12,['noarch'],4.0,https://github.com/aaristov/napari-segment,['pyhd8ed1ab_0'],0.3.9,conda-forge/napari-segment/0.3.9,1.0,0.0,2023-04-23 12:47:07.704000+00:00,2023-09-07 23:13:50.296000+00:00,conda,noarch/napari-segment-0.3.9-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['dask-core', 'imageio-ffmpeg', 'matplotlib-base', 'napari', 'nd2', 'numpy', 'python >=3.8', 'scikit-image', 'zarr']",noarch,1682253896107.0,None-any-None,pyhd8ed1ab_0,2023-04-23 12:47:07.937000+00:00,3658f3e96819d5ce28175b3150cb20ce,b5cafaacb07751eeb658c2ebd083d63ed9b08ee47bad0df7d8aa2240f832b137,21895.0,conda-forge/napari-segment/0.3.9/noarch/napari-segment-0.3.9-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-segment/0.3.9/noarch/napari-segment-0.3.9-pyhd8ed1ab_0.conda,conda,0.3.9,conda-forge,['main'],public,,0.2.1,napari-segment.get_reader,Open data with Segment organoid,napari_segment._reader:napari_get_reader,napari-segment.get_reader,"['*.npy', '*.nd2', '*.tif']",True,2.1,napari-segment,0.3.12,,Segment organoids and measure intensities,"# napari-segment +",text/markdown,https://github.com/rezaakb/napari-seedseg,Reza Akbarian Bafghi,reza.akb98@gmail.com,BSD-3,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['napari', 'numpy', 'magicgui', 'qtpy', 'opencv-python-headless', 'scikit-image>=0.19.3', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.8,"['Bug Tracker, https://github.com/rezaakb/napari-seedseg/issues', 'Documentation, https://github.com/rezaakb/napari-seedseg#README.md', 'Source Code, https://github.com/rezaakb/napari-seedseg', 'User Support, https://github.com/rezaakb/napari-seedseg/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-seedseg.make_qwidget,SeedSeg,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +329,napari-segment,0.3.12,Segment organoid,Segment organoids and measure intensities,Andrey Aristov,BSD-3-Clause,https://github.com/aaristov/napari-segment,644528cd12ab8ac4c6b9c6f9,['conda'],,https://github.com/aaristov/napari-segment,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-segment,http://api.anaconda.org/packages/conda-forge/napari-segment,http://anaconda.org/conda-forge/napari-segment,"['0.3.9', '0.3.12']",0.3.9,0.3.12,['noarch'],4.0,https://github.com/aaristov/napari-segment,['pyhd8ed1ab_0'],0.3.9,conda-forge/napari-segment/0.3.9,1.0,0.0,2023-04-23 12:47:07.704000+00:00,2023-09-07 23:13:50.296000+00:00,conda,noarch/napari-segment-0.3.9-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['dask-core', 'imageio-ffmpeg', 'matplotlib-base', 'napari', 'nd2', 'numpy', 'python >=3.8', 'scikit-image', 'zarr']",noarch,1682253896107.0,None-any-None,pyhd8ed1ab_0,2023-04-23 12:47:07.937000+00:00,3658f3e96819d5ce28175b3150cb20ce,b5cafaacb07751eeb658c2ebd083d63ed9b08ee47bad0df7d8aa2240f832b137,21895.0,conda-forge/napari-segment/0.3.9/noarch/napari-segment-0.3.9-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-segment/0.3.9/noarch/napari-segment-0.3.9-pyhd8ed1ab_0.conda,conda,0.3.9,conda-forge,['main'],public,,0.2.1,napari-segment.get_reader,Open data with Segment organoid,napari_segment._reader:napari_get_reader,napari-segment.get_reader,"['*.npy', '*.nd2', '*.tif']",True,2.1,napari-segment,0.3.12,,Segment organoids and measure intensities,"# napari-segment [![License](https://img.shields.io/pypi/l/napari-segment.svg?color=green)](https://github.com/aaristov/napari-segment/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-segment.svg?color=green)](https://pypi.org/project/napari-segment) @@ -32877,8 +34294,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/aaristov/napari-segment,Andrey Aristov,aaristov@pasteur.fr,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['dask', 'imageio-ffmpeg', 'matplotlib', 'napari', 'nd2', 'numpy', 'pytest-qt', 'scikit-image', 'zarr']",>=3.8,"['Bug Tracker, https://github.com/aaristov/napari-segment/issues', 'Documentation, https://github.com/aaristov/napari-segment#README.md', 'Source Code, https://github.com/aaristov/napari-segment', 'User Support, https://github.com/aaristov/napari-segment/issues']",,False,0.3.12,conda-forge/napari-segment/0.3.12,,,,,conda,noarch/napari-segment-0.3.12-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['dask-core', 'imageio-ffmpeg', 'magicgui', 'matplotlib-base', 'napari', 'nd2', 'numpy', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image', 'scipy', 'tifffile', 'zarr']",pyhd8ed1ab_0,1694128309108.0,None-any-None,noarch,2023-09-07 23:13:48.269000+00:00,acdf0e2c0471f2fa5f645b667b2ddb28,95e236b89986d9a7063bb261afbf492bbb071082c628e64cd60a3df5981e491f,22156.0,conda-forge/napari-segment/0.3.12/noarch/napari-segment-0.3.12-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-segment/0.3.12/noarch/napari-segment-0.3.12-pyhd8ed1ab_0.conda,conda,0.3.12,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-segment.write_multiple,Save multi-layer data with Segment organoid,napari_segment._writer:write_multiple,napari-segment.write_single_image,Save image data with Segment organoid,napari_segment._writer:write_single_image,napari-segment.make_early_aggregate,Load sample data,napari_segment._sample_data:make_early_aggregate,napari-segment.make_qwidget,Segment multipos,False,,,,,,,,,,napari-segment.make_late_aggregate,Load sample data,napari_segment._sample_data:make_late_aggregate,napari-segment.write_multiple,"['image*', 'labels*']",,napari-segment.write_single_image,['image'],['.npy'],,napari-segment.make_late_aggregate,D3_D4,Old aggregate,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-segment.make_early_aggregate,D3_D1,Early aggregate,napari-segment.make_qwidget,Segment nd2 stack with multiple positions,napari_segment._widget:SegmentStack,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -316,napari-segment-anything,0.1.4,Segment Anything,Napari plugin of Segment Anything Model (SAM),Jordao Bragantini,Apache-2.0,https://github.com/jookuma/napari-segment-anything,64556854655dfac2fea3998a,['conda'],,https://github.com/jookuma/napari-segment-anything,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-segment-anything,http://api.anaconda.org/packages/conda-forge/napari-segment-anything,http://anaconda.org/conda-forge/napari-segment-anything,['0.1.4'],0.1.4,0.1.4,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.4,conda-forge/napari-segment-anything/0.1.4,1.0,0.0,2023-05-05 20:34:26.408000+00:00,2023-06-18 17:28:11.867000+00:00,conda,noarch/napari-segment-anything-0.1.4-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'pytorch', 'qtpy', 'segment-anything', 'torchvision']",noarch,1683318708609.0,None-any-None,pyhd8ed1ab_0,2023-05-05 20:34:26.630000+00:00,c0909f7de81cf9424da5a18966ebf1ea,7dbd526938fd5fe64772203ea4892f6c448fc86b1c23198ff487eed0fe668272,17387.0,conda-forge/napari-segment-anything/0.1.4/noarch/napari-segment-anything-0.1.4-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-segment-anything/0.1.4/noarch/napari-segment-anything-0.1.4-pyhd8ed1ab_0.conda,conda,0.1.4,conda-forge,['main'],public,,0.2.1,napari-segment-anything.samwidget,Segment Anything,napari_segment_anything._widget:SAMWidget,,,,2.1,napari-segment-anything,0.1.4,,Napari plugin of Segment Anything Model (SAM),"# napari-segment-anything +",text/markdown,https://github.com/aaristov/napari-segment,Andrey Aristov,aaristov@pasteur.fr,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['dask', 'imageio-ffmpeg', 'matplotlib', 'napari', 'nd2', 'numpy', 'pytest-qt', 'scikit-image', 'zarr']",>=3.8,"['Bug Tracker, https://github.com/aaristov/napari-segment/issues', 'Documentation, https://github.com/aaristov/napari-segment#README.md', 'Source Code, https://github.com/aaristov/napari-segment', 'User Support, https://github.com/aaristov/napari-segment/issues']",,False,0.3.12,conda-forge/napari-segment/0.3.12,,,,,conda,noarch/napari-segment-0.3.12-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['dask-core', 'imageio-ffmpeg', 'magicgui', 'matplotlib-base', 'napari', 'nd2', 'numpy', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image', 'scipy', 'tifffile', 'zarr']",pyhd8ed1ab_0,1694128309108.0,None-any-None,noarch,2023-09-07 23:13:48.269000+00:00,acdf0e2c0471f2fa5f645b667b2ddb28,95e236b89986d9a7063bb261afbf492bbb071082c628e64cd60a3df5981e491f,22156.0,conda-forge/napari-segment/0.3.12/noarch/napari-segment-0.3.12-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-segment/0.3.12/noarch/napari-segment-0.3.12-pyhd8ed1ab_0.conda,conda,0.3.12,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-segment.write_multiple,Save multi-layer data with Segment organoid,napari_segment._writer:write_multiple,napari-segment.write_single_image,Save image data with Segment organoid,napari_segment._writer:write_single_image,napari-segment.make_early_aggregate,Load sample data,napari_segment._sample_data:make_early_aggregate,napari-segment.make_qwidget,Segment multipos,False,,,,,,,,,,napari-segment.make_late_aggregate,Load sample data,napari_segment._sample_data:make_late_aggregate,napari-segment.write_multiple,"['image*', 'labels*']",,napari-segment.write_single_image,['image'],['.npy'],,napari-segment.make_late_aggregate,D3_D4,Old aggregate,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-segment.make_early_aggregate,D3_D1,Early aggregate,napari-segment.make_qwidget,Segment nd2 stack with multiple positions,napari_segment._widget:SegmentStack,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +330,napari-segment-anything,0.1.4,Segment Anything,Napari plugin of Segment Anything Model (SAM),Jordao Bragantini,Apache-2.0,https://github.com/jookuma/napari-segment-anything,64556854655dfac2fea3998a,['conda'],,https://github.com/jookuma/napari-segment-anything,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-segment-anything,http://api.anaconda.org/packages/conda-forge/napari-segment-anything,http://anaconda.org/conda-forge/napari-segment-anything,['0.1.4'],0.1.4,0.1.4,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.4,conda-forge/napari-segment-anything/0.1.4,1.0,0.0,2023-05-05 20:34:26.408000+00:00,2023-06-18 17:28:11.867000+00:00,conda,noarch/napari-segment-anything-0.1.4-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'pytorch', 'qtpy', 'segment-anything', 'torchvision']",noarch,1683318708609.0,None-any-None,pyhd8ed1ab_0,2023-05-05 20:34:26.630000+00:00,c0909f7de81cf9424da5a18966ebf1ea,7dbd526938fd5fe64772203ea4892f6c448fc86b1c23198ff487eed0fe668272,17387.0,conda-forge/napari-segment-anything/0.1.4/noarch/napari-segment-anything-0.1.4-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-segment-anything/0.1.4/noarch/napari-segment-anything-0.1.4-pyhd8ed1ab_0.conda,conda,0.1.4,conda-forge,['main'],public,,0.2.1,napari-segment-anything.samwidget,Segment Anything,napari_segment_anything._widget:SAMWidget,,,,2.1,napari-segment-anything,0.1.4,,Napari plugin of Segment Anything Model (SAM),"# napari-segment-anything [![License Apache Software License 2.0](https://img.shields.io/pypi/l/napari-segment-anything.svg?color=green)](https://github.com/jookuma/napari-segment-anything/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-segment-anything.svg?color=green)](https://pypi.org/project/napari-segment-anything) @@ -32973,8 +34390,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/jookuma/napari-segment-anything,Jordao Bragantini,jordao.bragantini@czbiohub.org,Apache-2.0,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'torch', 'torchvision', 'segment-anything', 'qtpy', 'magicgui', 'napari', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/jookuma/napari-segment-anything/issues', 'Documentation, https://github.com/jookuma/napari-segment-anything#README.md', 'Source Code, https://github.com/jookuma/napari-segment-anything', 'User Support, https://github.com/jookuma/napari-segment-anything/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-segment-anything.samwidget,Segment Anything,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -317,napari-segment-anything-2,0.0.1,Segment Anything 2,A napari plugin for Meta's Segment Anything 2 in Images and Videos,Jordão Bragantini," +",text/markdown,https://github.com/jookuma/napari-segment-anything,Jordao Bragantini,jordao.bragantini@czbiohub.org,Apache-2.0,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'torch', 'torchvision', 'segment-anything', 'qtpy', 'magicgui', 'napari', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/jookuma/napari-segment-anything/issues', 'Documentation, https://github.com/jookuma/napari-segment-anything#README.md', 'Source Code, https://github.com/jookuma/napari-segment-anything', 'User Support, https://github.com/jookuma/napari-segment-anything/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-segment-anything.samwidget,Segment Anything,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +331,napari-segment-anything-2,0.0.1,Segment Anything 2,A napari plugin for Meta's Segment Anything 2 in Images and Videos,Jordão Bragantini," Copyright (c) 2024, Jordão Bragantini All rights reserved. @@ -33096,8 +34513,8 @@ DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE -OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['magicgui', 'numpy', 'qtpy', 'scikit-image', ""napari; extra == 'testing'"", ""pyqt5; extra == 'testing'"", ""pytest; extra == 'testing'"", ""pytest-cov; extra == 'testing'"", ""pytest-qt; extra == 'testing'"", ""tox; extra == 'testing'""]",>=3.9,"['Bug Tracker, https://github.com/JoOkuma/napari-segment-anything-2/issues', 'Documentation, https://github.com/JoOkuma/napari-segment-anything-2#README.md', 'Source Code, https://github.com/JoOkuma/napari-segment-anything-2', 'User Support, https://github.com/JoOkuma/napari-segment-anything-2/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['Segmentation'],,,,,,,,,,napari-segment-anything-2.sam2,Segment Anything 2,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -318,napari-segment-blobs-and-things-with-membranes,0.3.8,napari-segment-blobs-and-things-with-membranes,A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/or membranes,Robert Haase,BSD-3-Clause,https://github.com/haesleinhuepf/napari-segment-blobs-and-things-with-membranes,61fe718b9501cf2a1d0974c9,['conda'],,https://github.com/haesleinhuepf/napari-segment-blobs-and-things-with-membranes,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-segment-blobs-and-things-with-membranes,http://api.anaconda.org/packages/conda-forge/napari-segment-blobs-and-things-with-membranes,http://anaconda.org/conda-forge/napari-segment-blobs-and-things-with-membranes,"['0.2.15', '0.2.16', '0.2.17', '0.2.18', '0.2.19', '0.2.20', '0.2.21', '0.2.22', '0.3.0', '0.3.1', '0.3.2', '0.3.3', '0.3.4', '0.3.5', '0.3.6', '0.3.7', '0.3.8']",0.3.8,0.3.8,['noarch'],41.0,https://github.com/haesleinhuepf/napari-segment-blobs-and-things-with-membranes,['pyhd8ed1ab_0'],0.2.15,conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.15,1.0,0.0,2022-02-05 12:45:59.886000+00:00,2024-03-26 19:08:50.736000+00:00,conda,noarch/napari-segment-blobs-and-things-with-membranes-0.2.15-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'scikit-image', 'scipy']",noarch,1644065023492.0,None-any-None,pyhd8ed1ab_0,2022-02-05 12:46:00.899000+00:00,9ed26247b0fa340f829d97a072e9821a,None,13653.0,conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.15/noarch/napari-segment-blobs-and-things-with-membranes-0.2.15-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.15/noarch/napari-segment-blobs-and-things-with-membranes-0.2.15-pyhd8ed1ab_0.tar.bz2,conda,0.2.15,conda-forge,['main'],public,,0.2.1,napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,gaussian_blur,napari_segment_blobs_and_things_with_membranes:napari_experimental_provide_function,,,,2.1,napari-segment-blobs-and-things-with-membranes,0.3.8,,A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/or membranes,"# napari-segment-blobs-and-things-with-membranes (nsbatwm) +OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['magicgui', 'numpy', 'qtpy', 'scikit-image', ""napari; extra == 'testing'"", ""pyqt5; extra == 'testing'"", ""pytest; extra == 'testing'"", ""pytest-cov; extra == 'testing'"", ""pytest-qt; extra == 'testing'"", ""tox; extra == 'testing'""]",>=3.9,"['Bug Tracker, https://github.com/JoOkuma/napari-segment-anything-2/issues', 'Documentation, https://github.com/JoOkuma/napari-segment-anything-2#README.md', 'Source Code, https://github.com/JoOkuma/napari-segment-anything-2', 'User Support, https://github.com/JoOkuma/napari-segment-anything-2/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['Segmentation'],,,,,,,,,,napari-segment-anything-2.sam2,Segment Anything 2,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +332,napari-segment-blobs-and-things-with-membranes,0.3.12,napari-segment-blobs-and-things-with-membranes,A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/or membranes,Robert Haase,BSD-3-Clause,https://github.com/haesleinhuepf/napari-segment-blobs-and-things-with-membranes,61fe718b9501cf2a1d0974c9,['conda'],,https://github.com/haesleinhuepf/napari-segment-blobs-and-things-with-membranes,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-segment-blobs-and-things-with-membranes,http://api.anaconda.org/packages/conda-forge/napari-segment-blobs-and-things-with-membranes,http://anaconda.org/conda-forge/napari-segment-blobs-and-things-with-membranes,"['0.2.15', '0.2.16', '0.2.17', '0.2.18', '0.2.19', '0.2.20', '0.2.21', '0.2.22', '0.3.0', '0.3.1', '0.3.2', '0.3.3', '0.3.4', '0.3.5', '0.3.6', '0.3.7', '0.3.8', '0.3.11']",0.3.11,0.3.11,['noarch'],49.0,https://github.com/haesleinhuepf/napari-segment-blobs-and-things-with-membranes,"['pyha07c04f_0', 'pyha07c04f_1', 'pyhd8ed1ab_0']",0.2.15,conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.15,1.0,0.0,2022-02-05 12:45:59.886000+00:00,2024-12-26 07:36:39.452000+00:00,conda,noarch/napari-segment-blobs-and-things-with-membranes-0.2.15-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'scikit-image', 'scipy']",noarch,1644065023492.0,None-any-None,pyhd8ed1ab_0,2022-02-05 12:46:00.899000+00:00,9ed26247b0fa340f829d97a072e9821a,None,13653.0,conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.15/noarch/napari-segment-blobs-and-things-with-membranes-0.2.15-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.15/noarch/napari-segment-blobs-and-things-with-membranes-0.2.15-pyhd8ed1ab_0.tar.bz2,conda,0.2.15,conda-forge,['main'],public,,0.2.1,napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,gaussian_blur,napari_segment_blobs_and_things_with_membranes:napari_experimental_provide_function,,,,2.1,napari-segment-blobs-and-things-with-membranes,0.3.12,,A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/or membranes,"# napari-segment-blobs-and-things-with-membranes (nsbatwm) [![License](https://img.shields.io/pypi/l/napari-segment-blobs-and-things-with-membranes.svg?color=green)](https://github.com/haesleinhuepf/napari-segment-blobs-and-things-with-membranes/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-segment-blobs-and-things-with-membranes.svg?color=green)](https://pypi.org/project/napari-segment-blobs-and-things-with-membranes) @@ -33237,8 +34654,8 @@ If you encounter any problems, please create a thread on [image.sc] along with a [image.sc]: https://image.sc [@haesleinhuepf]: https://twitter.com/haesleinhuepf -",text/markdown,https://github.com/haesleinhuepf/napari-segment-blobs-and-things-with-membranes,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine >=0.1.4', 'numpy', 'scikit-image', 'scipy', 'napari-tools-menu >=0.1.17', 'napari-time-slicer >=0.4.8', 'napari-assistant', 'stackview >=0.3.2']",>=3.8,"['Bug Tracker, https://github.com/haesleinhuepf/napari-segment-blobs-and-things-with-membranes/issues', 'Documentation, https://github.com/haesleinhuepf/napari-segment-blobs-and-things-with-membranes#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-segment-blobs-and-things-with-membranes', 'User Support, https://github.com/haesleinhuepf/napari-segment-blobs-and-things-with-membranes/issues']",,True,0.2.16,conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.16,0.2.17,conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.17,0.2.18,conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.18,conda,noarch/napari-segment-blobs-and-things-with-membranes-0.2.16-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'scikit-image', 'scipy']",pyhd8ed1ab_0,1644231700872.0,None-any-None,noarch,2022-02-07 11:04:20.657000+00:00,1d382d7b7229116e979c24978b377ccc,None,13663.0,conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.16/noarch/napari-segment-blobs-and-things-with-membranes-0.2.16-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.16/noarch/napari-segment-blobs-and-things-with-membranes-0.2.16-pyhd8ed1ab_0.tar.bz2,conda,0.2.16,conda-forge,['main'],conda,noarch/napari-segment-blobs-and-things-with-membranes-0.2.17-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'scikit-image', 'scipy']",noarch,1644740028022.0,None-any-None,pyhd8ed1ab_0,2022-02-13 08:16:00.935000+00:00,a6f4028cbc4e55a6f3de1a1689fa120a,None,13732.0,conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.17/noarch/napari-segment-blobs-and-things-with-membranes-0.2.17-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.17/noarch/napari-segment-blobs-and-things-with-membranes-0.2.17-pyhd8ed1ab_0.tar.bz2,conda,0.2.17,conda-forge,['main'],conda,noarch/napari-segment-blobs-and-things-with-membranes-0.2.18-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'scikit-image', 'scipy']",BSD-3-Clause,python,1646032710368.0,2022-02-28 07:20:44.555000+00:00,bc4f574e267d67ac0c75d7e6c10675ed,None,13838.0,conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.18/noarch/napari-segment-blobs-and-things-with-membranes-0.2.18-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.18/noarch/napari-segment-blobs-and-things-with-membranes-0.2.18-pyhd8ed1ab_0.tar.bz2,conda,0.2.18,conda-forge,['main'],,napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,subtract_background,napari_segment_blobs_and_things_with_membranes:napari_experimental_provide_function,napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,threshold_otsu,napari_segment_blobs_and_things_with_membranes:napari_experimental_provide_function,napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,threshold_yen,napari_segment_blobs_and_things_with_membranes:napari_experimental_provide_function,napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,gaussian_blur,True,napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,subtract_background,True,napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,threshold_otsu,True,napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,threshold_yen,True,napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,threshold_isodata,napari_segment_blobs_and_things_with_membranes:napari_experimental_provide_function,,,,,,,,,,,0.2.19,conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.19,0.2.20,conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.20,0.2.21,conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.21,conda,noarch/napari-segment-blobs-and-things-with-membranes-0.2.19-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'scikit-image', 'scipy']",noarch,1646311974576.0,None-any-None,pyhd8ed1ab_0,2022-03-03 12:55:24.286000+00:00,8d8a6c4e33da22eeba97b45375067358,None,13821.0,conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.19/noarch/napari-segment-blobs-and-things-with-membranes-0.2.19-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.19/noarch/napari-segment-blobs-and-things-with-membranes-0.2.19-pyhd8ed1ab_0.tar.bz2,conda,0.2.19,conda-forge,['main'],conda,noarch/napari-segment-blobs-and-things-with-membranes-0.2.20-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'scikit-image', 'scipy']",noarch,1647808775730.0,None-any-None,pyhd8ed1ab_0,2022-03-20 20:42:05.045000+00:00,cb31ea6e2dac7099fda0359cb2158369,None,13932.0,conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.20/noarch/napari-segment-blobs-and-things-with-membranes-0.2.20-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.20/noarch/napari-segment-blobs-and-things-with-membranes-0.2.20-pyhd8ed1ab_0.tar.bz2,conda,0.2.20,conda-forge,['main'],conda,noarch/napari-segment-blobs-and-things-with-membranes-0.2.21-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'scikit-image', 'scipy']",BSD-3-Clause,python,1648665441533.0,2022-03-30 18:39:30.204000+00:00,a3ef8d5c6a74c1a555586e5d9e1f0421,None,13957.0,conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.21/noarch/napari-segment-blobs-and-things-with-membranes-0.2.21-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.21/noarch/napari-segment-blobs-and-things-with-membranes-0.2.21-pyhd8ed1ab_0.tar.bz2,conda,0.2.21,conda-forge,['main'],,,,napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,threshold_li,napari_segment_blobs_and_things_with_membranes:napari_experimental_provide_function,0.2.22,conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.22,0.3.0,conda-forge/napari-segment-blobs-and-things-with-membranes/0.3.0,conda,noarch/napari-segment-blobs-and-things-with-membranes-0.2.22-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'scikit-image', 'scipy']",noarch,1652026715164.0,None-any-None,pyhd8ed1ab_0,2022-05-08 16:21:09.624000+00:00,ca7bed5f0abf2b97751c0a15bbc39180,None,14143.0,conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.22/noarch/napari-segment-blobs-and-things-with-membranes-0.2.22-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.22/noarch/napari-segment-blobs-and-things-with-membranes-0.2.22-pyhd8ed1ab_0.tar.bz2,conda,0.2.22,conda-forge,['main'],conda,noarch/napari-segment-blobs-and-things-with-membranes-0.3.0-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'scikit-image', 'scipy']",BSD-3-Clause,python,1657479386711.0,2022-07-10 18:58:24.901000+00:00,adb54b3ef7b9ba2ab80974cff0484458,None,15316.0,conda-forge/napari-segment-blobs-and-things-with-membranes/0.3.0/noarch/napari-segment-blobs-and-things-with-membranes-0.3.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-segment-blobs-and-things-with-membranes/0.3.0/noarch/napari-segment-blobs-and-things-with-membranes-0.3.0-pyhd8ed1ab_0.tar.bz2,conda,0.3.0,conda-forge,['main'],napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,threshold_mean,napari_segment_blobs_and_things_with_membranes:napari_experimental_provide_function,napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,threshold_minimum,napari_segment_blobs_and_things_with_membranes:napari_experimental_provide_function,napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,threshold_triangle,napari_segment_blobs_and_things_with_membranes:napari_experimental_provide_function,napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,binary_invert,napari_segment_blobs_and_things_with_membranes:napari_experimental_provide_function,napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,split_touching_objects,napari_segment_blobs_and_things_with_membranes:napari_experimental_provide_function,napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,connected_component_labeling,napari_segment_blobs_and_things_with_membranes:napari_experimental_provide_function,,napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,threshold_isodata,True,napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,threshold_li,True,napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,threshold_mean,True,napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,threshold_minimum,True,conda,noarch/napari-segment-blobs-and-things-with-membranes-0.3.1-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'scikit-image', 'scipy']",BSD-3-Clause,python,1659471760909.0,2022-08-02 20:25:10.771000+00:00,48542ffe3283651cf16d2cecc7a2fc3c,None,15536.0,conda-forge/napari-segment-blobs-and-things-with-membranes/0.3.1/noarch/napari-segment-blobs-and-things-with-membranes-0.3.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-segment-blobs-and-things-with-membranes/0.3.1/noarch/napari-segment-blobs-and-things-with-membranes-0.3.1-pyhd8ed1ab_0.tar.bz2,conda,0.3.1,conda-forge,['main'],0.3.1,conda-forge/napari-segment-blobs-and-things-with-membranes/0.3.1,conda,noarch/napari-segment-blobs-and-things-with-membranes-0.3.2-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-time-slicer', 'napari-tools-menu >=0.1.17', 'numpy', 'python >=3.7', 'scikit-image', 'scipy', 'stackview >=0.3.2']",BSD-3-Clause,1661704402157.0,2022-08-28 16:35:28.521000+00:00,cfdf88381031d292d653499eb3cb949f,None,16015.0,conda-forge/napari-segment-blobs-and-things-with-membranes/0.3.2/noarch/napari-segment-blobs-and-things-with-membranes-0.3.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-segment-blobs-and-things-with-membranes/0.3.2/noarch/napari-segment-blobs-and-things-with-membranes-0.3.2-pyhd8ed1ab_0.tar.bz2,conda,0.3.2,conda-forge,['main'],conda,noarch/napari-segment-blobs-and-things-with-membranes-0.3.3-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-time-slicer', 'napari-tools-menu >=0.1.17', 'numpy', 'python >=3.7', 'scikit-image', 'scipy', 'stackview >=0.3.2']",BSD-3-Clause,1662656448124.0,2022-09-08 17:03:05.667000+00:00,9d8bda9b520cbdac5d919f061c888bc3,None,16196.0,conda-forge/napari-segment-blobs-and-things-with-membranes/0.3.3/noarch/napari-segment-blobs-and-things-with-membranes-0.3.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-segment-blobs-and-things-with-membranes/0.3.3/noarch/napari-segment-blobs-and-things-with-membranes-0.3.3-pyhd8ed1ab_0.tar.bz2,conda,0.3.3,conda-forge,['main'],conda,noarch/napari-segment-blobs-and-things-with-membranes-0.3.4-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-time-slicer', 'napari-tools-menu >=0.1.17', 'numpy', 'python >=3.7', 'scikit-image', 'scipy', 'stackview >=0.3.2']",BSD-3-Clause,1677218307117.0,2023-02-24 06:00:07.253000+00:00,376a1996450aed633d3afa50350c9aea,f0492931ab41d5cebc2cd1d5b694283ab68120f52a908704b35f0a9d7d7eb5bd,17902.0,conda-forge/napari-segment-blobs-and-things-with-membranes/0.3.4/noarch/napari-segment-blobs-and-things-with-membranes-0.3.4-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-segment-blobs-and-things-with-membranes/0.3.4/noarch/napari-segment-blobs-and-things-with-membranes-0.3.4-pyhd8ed1ab_0.conda,conda,0.3.4,conda-forge,['main'],,, -319,napari-segment-everything,0.1.6,Napari Segment Everything,A Napari SAM plugin to segment everything in your image (not just some things),"Brian Northan, Ian Coccimiglio",BSD-3-Clause,https://github.com/True-North-Intelligent-Algorithms/napari-segment-everything,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-segment-everything.napari_segment_everything,Napari Segment Everything,napari_segment_everything.segment_everything:NapariSegmentEverything,,,,2.1,napari-segment-everything,0.1.6,,A Napari SAM plugin to segment everything in your image (not just some things),"# napari-segment-everything +",text/markdown,https://github.com/haesleinhuepf/napari-segment-blobs-and-things-with-membranes,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine>=0.1.4', 'numpy', 'scikit-image', 'scipy', 'napari-tools-menu>=0.1.17', 'napari-time-slicer>=0.4.8', 'napari-assistant', 'stackview>=0.9.1']",>=3.8,"['Bug Tracker, https://github.com/haesleinhuepf/napari-segment-blobs-and-things-with-membranes/issues', 'Documentation, https://github.com/haesleinhuepf/napari-segment-blobs-and-things-with-membranes#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-segment-blobs-and-things-with-membranes', 'User Support, https://github.com/haesleinhuepf/napari-segment-blobs-and-things-with-membranes/issues']",,True,0.2.16,conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.16,0.2.17,conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.17,0.2.18,conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.18,conda,noarch/napari-segment-blobs-and-things-with-membranes-0.2.16-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'scikit-image', 'scipy']",pyhd8ed1ab_0,1644231700872.0,None-any-None,noarch,2022-02-07 11:04:20.657000+00:00,1d382d7b7229116e979c24978b377ccc,None,13663.0,conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.16/noarch/napari-segment-blobs-and-things-with-membranes-0.2.16-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.16/noarch/napari-segment-blobs-and-things-with-membranes-0.2.16-pyhd8ed1ab_0.tar.bz2,conda,0.2.16,conda-forge,['main'],conda,noarch/napari-segment-blobs-and-things-with-membranes-0.2.17-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'scikit-image', 'scipy']",noarch,1644740028022.0,None-any-None,pyhd8ed1ab_0,2022-02-13 08:16:00.935000+00:00,a6f4028cbc4e55a6f3de1a1689fa120a,None,13732.0,conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.17/noarch/napari-segment-blobs-and-things-with-membranes-0.2.17-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.17/noarch/napari-segment-blobs-and-things-with-membranes-0.2.17-pyhd8ed1ab_0.tar.bz2,conda,0.2.17,conda-forge,['main'],conda,noarch/napari-segment-blobs-and-things-with-membranes-0.2.18-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'scikit-image', 'scipy']",BSD-3-Clause,python,1646032710368.0,2022-02-28 07:20:44.555000+00:00,bc4f574e267d67ac0c75d7e6c10675ed,None,13838.0,conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.18/noarch/napari-segment-blobs-and-things-with-membranes-0.2.18-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.18/noarch/napari-segment-blobs-and-things-with-membranes-0.2.18-pyhd8ed1ab_0.tar.bz2,conda,0.2.18,conda-forge,['main'],,napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,subtract_background,napari_segment_blobs_and_things_with_membranes:napari_experimental_provide_function,napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,threshold_otsu,napari_segment_blobs_and_things_with_membranes:napari_experimental_provide_function,napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,threshold_yen,napari_segment_blobs_and_things_with_membranes:napari_experimental_provide_function,napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,gaussian_blur,True,napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,subtract_background,True,napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,threshold_otsu,True,napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,threshold_yen,True,napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,threshold_isodata,napari_segment_blobs_and_things_with_membranes:napari_experimental_provide_function,,,,,,,,,,,0.2.19,conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.19,0.2.20,conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.20,0.2.21,conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.21,conda,noarch/napari-segment-blobs-and-things-with-membranes-0.2.19-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'scikit-image', 'scipy']",noarch,1646311974576.0,None-any-None,pyhd8ed1ab_0,2022-03-03 12:55:24.286000+00:00,8d8a6c4e33da22eeba97b45375067358,None,13821.0,conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.19/noarch/napari-segment-blobs-and-things-with-membranes-0.2.19-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.19/noarch/napari-segment-blobs-and-things-with-membranes-0.2.19-pyhd8ed1ab_0.tar.bz2,conda,0.2.19,conda-forge,['main'],conda,noarch/napari-segment-blobs-and-things-with-membranes-0.2.20-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'scikit-image', 'scipy']",noarch,1647808775730.0,None-any-None,pyhd8ed1ab_0,2022-03-20 20:42:05.045000+00:00,cb31ea6e2dac7099fda0359cb2158369,None,13932.0,conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.20/noarch/napari-segment-blobs-and-things-with-membranes-0.2.20-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.20/noarch/napari-segment-blobs-and-things-with-membranes-0.2.20-pyhd8ed1ab_0.tar.bz2,conda,0.2.20,conda-forge,['main'],conda,noarch/napari-segment-blobs-and-things-with-membranes-0.2.21-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'scikit-image', 'scipy']",BSD-3-Clause,python,1648665441533.0,2022-03-30 18:39:30.204000+00:00,a3ef8d5c6a74c1a555586e5d9e1f0421,None,13957.0,conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.21/noarch/napari-segment-blobs-and-things-with-membranes-0.2.21-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.21/noarch/napari-segment-blobs-and-things-with-membranes-0.2.21-pyhd8ed1ab_0.tar.bz2,conda,0.2.21,conda-forge,['main'],,,,napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,threshold_li,napari_segment_blobs_and_things_with_membranes:napari_experimental_provide_function,0.2.22,conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.22,0.3.0,conda-forge/napari-segment-blobs-and-things-with-membranes/0.3.0,conda,noarch/napari-segment-blobs-and-things-with-membranes-0.2.22-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'scikit-image', 'scipy']",noarch,1652026715164.0,None-any-None,pyhd8ed1ab_0,2022-05-08 16:21:09.624000+00:00,ca7bed5f0abf2b97751c0a15bbc39180,None,14143.0,conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.22/noarch/napari-segment-blobs-and-things-with-membranes-0.2.22-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-segment-blobs-and-things-with-membranes/0.2.22/noarch/napari-segment-blobs-and-things-with-membranes-0.2.22-pyhd8ed1ab_0.tar.bz2,conda,0.2.22,conda-forge,['main'],conda,noarch/napari-segment-blobs-and-things-with-membranes-0.3.0-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'scikit-image', 'scipy']",BSD-3-Clause,python,1657479386711.0,2022-07-10 18:58:24.901000+00:00,adb54b3ef7b9ba2ab80974cff0484458,None,15316.0,conda-forge/napari-segment-blobs-and-things-with-membranes/0.3.0/noarch/napari-segment-blobs-and-things-with-membranes-0.3.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-segment-blobs-and-things-with-membranes/0.3.0/noarch/napari-segment-blobs-and-things-with-membranes-0.3.0-pyhd8ed1ab_0.tar.bz2,conda,0.3.0,conda-forge,['main'],napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,threshold_mean,napari_segment_blobs_and_things_with_membranes:napari_experimental_provide_function,napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,threshold_minimum,napari_segment_blobs_and_things_with_membranes:napari_experimental_provide_function,napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,threshold_triangle,napari_segment_blobs_and_things_with_membranes:napari_experimental_provide_function,napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,binary_invert,napari_segment_blobs_and_things_with_membranes:napari_experimental_provide_function,napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,split_touching_objects,napari_segment_blobs_and_things_with_membranes:napari_experimental_provide_function,,napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,threshold_isodata,True,napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,threshold_li,True,napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,threshold_mean,True,napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,threshold_minimum,True,conda,noarch/napari-segment-blobs-and-things-with-membranes-0.3.1-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'scikit-image', 'scipy']",BSD-3-Clause,python,1659471760909.0,2022-08-02 20:25:10.771000+00:00,48542ffe3283651cf16d2cecc7a2fc3c,None,15536.0,conda-forge/napari-segment-blobs-and-things-with-membranes/0.3.1/noarch/napari-segment-blobs-and-things-with-membranes-0.3.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-segment-blobs-and-things-with-membranes/0.3.1/noarch/napari-segment-blobs-and-things-with-membranes-0.3.1-pyhd8ed1ab_0.tar.bz2,conda,0.3.1,conda-forge,['main'],conda,noarch/napari-segment-blobs-and-things-with-membranes-0.3.2-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-time-slicer', 'napari-tools-menu >=0.1.17', 'numpy', 'python >=3.7', 'scikit-image', 'scipy', 'stackview >=0.3.2']",BSD-3-Clause,python,1661704402157.0,2022-08-28 16:35:28.521000+00:00,cfdf88381031d292d653499eb3cb949f,None,16015.0,conda-forge/napari-segment-blobs-and-things-with-membranes/0.3.2/noarch/napari-segment-blobs-and-things-with-membranes-0.3.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-segment-blobs-and-things-with-membranes/0.3.2/noarch/napari-segment-blobs-and-things-with-membranes-0.3.2-pyhd8ed1ab_0.tar.bz2,conda,0.3.2,conda-forge,['main'],0.3.1,conda-forge/napari-segment-blobs-and-things-with-membranes/0.3.1,conda,noarch/napari-segment-blobs-and-things-with-membranes-0.3.3-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-time-slicer', 'napari-tools-menu >=0.1.17', 'numpy', 'python >=3.7', 'scikit-image', 'scipy', 'stackview >=0.3.2']",BSD-3-Clause,1662656448124.0,2022-09-08 17:03:05.667000+00:00,9d8bda9b520cbdac5d919f061c888bc3,None,16196.0,conda-forge/napari-segment-blobs-and-things-with-membranes/0.3.3/noarch/napari-segment-blobs-and-things-with-membranes-0.3.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-segment-blobs-and-things-with-membranes/0.3.3/noarch/napari-segment-blobs-and-things-with-membranes-0.3.3-pyhd8ed1ab_0.tar.bz2,conda,0.3.3,conda-forge,['main'],0.3.2,conda-forge/napari-segment-blobs-and-things-with-membranes/0.3.2,conda,noarch/napari-segment-blobs-and-things-with-membranes-0.3.4-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-time-slicer', 'napari-tools-menu >=0.1.17', 'numpy', 'python >=3.7', 'scikit-image', 'scipy', 'stackview >=0.3.2']",BSD-3-Clause,1677218307117.0,2023-02-24 06:00:07.253000+00:00,376a1996450aed633d3afa50350c9aea,f0492931ab41d5cebc2cd1d5b694283ab68120f52a908704b35f0a9d7d7eb5bd,17902.0,conda-forge/napari-segment-blobs-and-things-with-membranes/0.3.4/noarch/napari-segment-blobs-and-things-with-membranes-0.3.4-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-segment-blobs-and-things-with-membranes/0.3.4/noarch/napari-segment-blobs-and-things-with-membranes-0.3.4-pyhd8ed1ab_0.conda,conda,0.3.4,conda-forge,['main'],conda,noarch/napari-segment-blobs-and-things-with-membranes-0.3.5-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-time-slicer', 'napari-tools-menu >=0.1.17', 'numpy', 'python >=3.7', 'scikit-image', 'scipy', 'stackview >=0.3.2']",BSD-3-Clause,2023-06-30 05:23:18.291000+00:00,0b098aec0c41e0dfa3bbddeba5b30987,4ee601b60362a12977bcc8a992168ecccbf120cf20a51235a10f1178435e0636,18435.0,conda-forge/napari-segment-blobs-and-things-with-membranes/0.3.5/noarch/napari-segment-blobs-and-things-with-membranes-0.3.5-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-segment-blobs-and-things-with-membranes/0.3.5/noarch/napari-segment-blobs-and-things-with-membranes-0.3.5-pyhd8ed1ab_0.conda,conda,0.3.5,conda-forge,['main'],,, +333,napari-segment-everything,0.1.6,Napari Segment Everything,A Napari SAM plugin to segment everything in your image (not just some things),"Brian Northan, Ian Coccimiglio",BSD-3-Clause,https://github.com/True-North-Intelligent-Algorithms/napari-segment-everything,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-segment-everything.napari_segment_everything,Napari Segment Everything,napari_segment_everything.segment_everything:NapariSegmentEverything,,,,2.1,napari-segment-everything,0.1.6,,A Napari SAM plugin to segment everything in your image (not just some things),"# napari-segment-everything [![License BSD-3](https://img.shields.io/pypi/l/napari-segment-everything.svg?color=green)](https://github.com/True-North-Intelligent-Algorithms/napari-segment-everything/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-segment-everything.svg?color=green)](https://pypi.org/project/napari-segment-everything) @@ -33310,8 +34727,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/True-North-Intelligent-Algorithms/napari-segment-everything,"Brian Northan, Ian Coccimiglio",bnorthan@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'torch', 'torchvision', 'segment-anything', 'magicgui', 'qtpy', 'scikit-image', 'napari', 'gdown', 'opencv-python', 'timm', 'torchpack', 'onnx', 'onnxsim', 'matplotlib', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.9,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-segment-everything.napari_segment_everything,Napari Segment Everything,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -320,napari-segmentation-overlap-filter,0.0.1,Segmentation Filter Overlap,A simple plugin to remove overlapping segmentations from images,Vanessa Dao,BSD-3-Clause,https://github.com/FrancisCrickInstitute/PARSEG,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-segmentation-overlap-filter.make_plugin_widget,Magicgui container widget for the plugin,napari_segmentation_overlap_filter:OverlappingSegmentationWidget,,,,2.1,napari-segmentation-overlap-filter,0.0.1,,A simple plugin to remove overlapping segmentations from images,"# PARSEG +",text/markdown,https://github.com/True-North-Intelligent-Algorithms/napari-segment-everything,"Brian Northan, Ian Coccimiglio",bnorthan@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'torch', 'torchvision', 'segment-anything', 'magicgui', 'qtpy', 'scikit-image', 'napari', 'gdown', 'opencv-python', 'timm', 'torchpack', 'onnx', 'onnxsim', 'matplotlib', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.9,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-segment-everything.napari_segment_everything,Napari Segment Everything,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +334,napari-segmentation-overlap-filter,0.0.1,Segmentation Filter Overlap,A simple plugin to remove overlapping segmentations from images,Vanessa Dao,BSD-3-Clause,https://github.com/FrancisCrickInstitute/PARSEG,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-segmentation-overlap-filter.make_plugin_widget,Magicgui container widget for the plugin,napari_segmentation_overlap_filter:OverlappingSegmentationWidget,,,,2.1,napari-segmentation-overlap-filter,0.0.1,,A simple plugin to remove overlapping segmentations from images,"# PARSEG [![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/FrancisCrickInstitute/CALM_Template/HEAD?labpath=blob%2Fmain%2Fsegment_image.ipynb) [![Python 3.11](https://img.shields.io/badge/python-3.11-blue.svg)](https://www.python.org/downloads/release/python-3115/) @@ -33363,8 +34780,8 @@ If you encounter any problems, please file an issue along with a detailed descri [Dask]: https://www.dask.org/ [pip]: https://pypi.org/project/pip/ [example notebook]: https://github.com/FrancisCrickInstitute/PARSEG/blob/main/Notebooks/Combine_Segmentations_And_Filter_Overlaps.ipynb -",text/markdown,https://github.com/FrancisCrickInstitute/PARSEG,Vanessa Dao,vanessadao31@yahoo.co.uk,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",,,,,,,,,,napari-segmentation-overlap-filter.make_plugin_widget,Segmentation Overlap Filter,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -321,napari-serialcellpose,0.2.2,serialcellpose,A simple plugin to batch segment cells with cellpose,Guillaume Witz,BSD-3-Clause,https://github.com/guiwitz/napari-serialcellpose,656e34fd64019bc9cf47a13c,['conda'],,https://pypi.org/project/napari-serialcellpose,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-serialcellpose,http://api.anaconda.org/packages/conda-forge/napari-serialcellpose,http://anaconda.org/conda-forge/napari-serialcellpose,['0.2.2'],0.2.2,0.2.2,['noarch'],3.0,https://github.com/guiwitz/napari-serialcellpose,['pyh9208f05_0'],0.2.2,conda-forge/napari-serialcellpose/0.2.2,1.0,0.0,2023-12-04 20:22:14.876000+00:00,2023-12-04 20:22:21.284000+00:00,conda,noarch/napari-serialcellpose-0.2.2-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['cellpose', 'magicgui', 'matplotlib-base', 'napari-aicsimageio', 'napari-skimage-regionprops', 'numpy', 'python >=3.8', 'qtpy']",noarch,1701721124430.0,None-any-None,pyh9208f05_0,2023-12-04 20:22:17.902000+00:00,4c68f836298e3d80dad9bacb931f9cf8,87593debd8458c6be0a3f75608e554253414ede9ec922ae09cdeac165fc46c68,585075.0,conda-forge/napari-serialcellpose/0.2.2/noarch/napari-serialcellpose-0.2.2-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-serialcellpose/0.2.2/noarch/napari-serialcellpose-0.2.2-pyh9208f05_0.conda,conda,0.2.2,conda-forge,['main'],public,,0.2.1,napari-serialcellpose.make_qwidget,Make example QWidget,napari_serialcellpose.serial_widget:SerialWidget,,,,2.1,napari-serialcellpose,0.2.2,,A simple plugin to batch segment cells with cellpose,"# napari-serialcellpose +",text/markdown,https://github.com/FrancisCrickInstitute/PARSEG,Vanessa Dao,vanessadao31@yahoo.co.uk,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",,,,,,,,,,napari-segmentation-overlap-filter.make_plugin_widget,Segmentation Overlap Filter,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +335,napari-serialcellpose,0.2.2,serialcellpose,A simple plugin to batch segment cells with cellpose,Guillaume Witz,BSD-3-Clause,https://github.com/guiwitz/napari-serialcellpose,656e34fd64019bc9cf47a13c,['conda'],,https://pypi.org/project/napari-serialcellpose,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-serialcellpose,http://api.anaconda.org/packages/conda-forge/napari-serialcellpose,http://anaconda.org/conda-forge/napari-serialcellpose,['0.2.2'],0.2.2,0.2.2,['noarch'],3.0,https://github.com/guiwitz/napari-serialcellpose,['pyh9208f05_0'],0.2.2,conda-forge/napari-serialcellpose/0.2.2,1.0,0.0,2023-12-04 20:22:14.876000+00:00,2023-12-04 20:22:21.284000+00:00,conda,noarch/napari-serialcellpose-0.2.2-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['cellpose', 'magicgui', 'matplotlib-base', 'napari-aicsimageio', 'napari-skimage-regionprops', 'numpy', 'python >=3.8', 'qtpy']",noarch,1701721124430.0,None-any-None,pyh9208f05_0,2023-12-04 20:22:17.902000+00:00,4c68f836298e3d80dad9bacb931f9cf8,87593debd8458c6be0a3f75608e554253414ede9ec922ae09cdeac165fc46c68,585075.0,conda-forge/napari-serialcellpose/0.2.2/noarch/napari-serialcellpose-0.2.2-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-serialcellpose/0.2.2/noarch/napari-serialcellpose-0.2.2-pyh9208f05_0.conda,conda,0.2.2,conda-forge,['main'],public,,0.2.1,napari-serialcellpose.make_qwidget,Make example QWidget,napari_serialcellpose.serial_widget:SerialWidget,,,,2.1,napari-serialcellpose,0.2.2,,A simple plugin to batch segment cells with cellpose,"# napari-serialcellpose [![License](https://img.shields.io/pypi/l/napari-serialcellpose.svg?color=green)](https://github.com/guiwitz/napari-serialcellpose/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-serialcellpose.svg?color=green)](https://pypi.org/project/napari-serialcellpose) @@ -33493,8 +34910,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/guiwitz/napari-serialcellpose,Guillaume Witz,guillaume.witz@unibe.ch,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['cellpose', 'numpy', 'magicgui', 'qtpy', 'matplotlib', 'napari-skimage-regionprops', 'napari-aicsimageio', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/guiwitz/napari-serialcellpose/issues', 'Documentation, https://github.com/guiwitz/napari-serialcellpose#README.md', 'Source Code, https://github.com/guiwitz/napari-serialcellpose', 'User Support, https://github.com/guiwitz/napari-serialcellpose/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-serialcellpose.make_qwidget,Serial Widget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -322,napari-shape-odyssey,0.1.1,shape odyssey,Analyze shapes of meshes,Johannes Soltwedel,BSD-3-Clause,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-shape-odyssey.get_reader,Open data with shape odyssey,napari_shape_odyssey._reader:napari_get_reader,napari-shape-odyssey.get_reader,"['*.obj', '*.stl', '*.off', '*.ply', '*.vtk', '*.vtp']",False,2.1,napari-shape-odyssey,0.1.1,,Analyze shapes of meshes,"# napari-shape-odyssey +",text/markdown,https://github.com/guiwitz/napari-serialcellpose,Guillaume Witz,guillaume.witz@unibe.ch,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['cellpose', 'numpy', 'magicgui', 'qtpy', 'matplotlib', 'napari-skimage-regionprops', 'napari-aicsimageio', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/guiwitz/napari-serialcellpose/issues', 'Documentation, https://github.com/guiwitz/napari-serialcellpose#README.md', 'Source Code, https://github.com/guiwitz/napari-serialcellpose', 'User Support, https://github.com/guiwitz/napari-serialcellpose/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-serialcellpose.make_qwidget,Serial Widget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +336,napari-shape-odyssey,0.1.1,shape odyssey,Analyze shapes of meshes,Johannes Soltwedel,BSD-3-Clause,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-shape-odyssey.get_reader,Open data with shape odyssey,napari_shape_odyssey._reader:napari_get_reader,napari-shape-odyssey.get_reader,"['*.obj', '*.stl', '*.off', '*.ply', '*.vtk', '*.vtp']",False,2.1,napari-shape-odyssey,0.1.1,,Analyze shapes of meshes,"# napari-shape-odyssey [![License BSD-3](https://img.shields.io/pypi/l/napari-shape-odyssey.svg?color=green)](https://github.com/jo-mueller/napari-shape-odyssey/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-shape-odyssey.svg?color=green)](https://pypi.org/project/napari-shape-odyssey) @@ -33582,8 +34999,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,,Johannes Soltwedel,johannes_richard.soltwedel@tu-dresden.de,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'vedo', 'pandas', 'napari', 'napari-stress', 'napari-process-points-and-surfaces', 'pyfmaps', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""PyQt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/jo-mueller/napari-shape-odyssey/issues', 'Documentation, https://jo-mueller.github.io/napari-shape-odyssey/intro.html', 'Source Code, https://github.com/jo-mueller/napari-shape-odyssey', 'User Support, https://github.com/jo-mueller/napari-shape-odyssey/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-shape-odyssey.make_sample_data,Load sample data from shape odyssey,napari_shape_odyssey._sample_data:generate_polka_dot_surface,napari-shape-odyssey.unwrapping_sphere,Unwrap surface into sphere,napari_shape_odyssey._unwrapping.unwrap:map_surface_to_sphere,napari-shape-odyssey.unwrapping_disk,Unwrap surface into disk,napari_shape_odyssey._unwrapping.unwrap:map_surface_to_disk,napari-shape-odyssey.shape_fingerprint_spectral,Spectral shape analysis,True,napari-shape-odyssey.laplace_beltrami_expansion,Approximate intensity in LBO basis,True,napari-shape-odyssey.heat_kernel_signature,Heat kernel signature,True,napari-shape-odyssey.wave_kernel_signature,Wave kernel signature,True,napari-shape-odyssey.mercator_projection,Mercator projection,napari_shape_odyssey._unwrapping.projections:mercator_projection,napari-shape-odyssey.write_multiple,"['image*', 'labels*']",,napari-shape-odyssey.write_single_image,['image'],['.npy'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-shape-odyssey.shape_fingerprint_spectral,Spectral shape analysis,napari_shape_odyssey._spectral:_shape_fingerprint,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-shape-odyssey.laplace_beltrami_expansion,Approximate intensity in LBO basis,napari_shape_odyssey._spectral:expand_intensity_on_surface,napari-shape-odyssey.heat_kernel_signature,Heat kernel signature,napari_shape_odyssey._signatures.signatures:_heat_kernel_signature,napari-shape-odyssey.wave_kernel_signature,Wave kernel signature,napari_shape_odyssey._signatures.signatures:_wave_kernel_signature,napari-shape-odyssey.landmark_widget,Show shape correspondencens,napari_shape_odyssey._signatures.landmarks:CorrespondenceWidget,,,,,,,,napari-shape-odyssey.landmark_widget,Show shape correspondencens,False,napari-shape-odyssey.unwrapping_sphere,Unwrap surface into sphere,True,napari-shape-odyssey.unwrapping_disk,Unwrap surface into disk,True,napari-shape-odyssey.mercator_projection,Mercator projection,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -323,napari-sif-reader,0.0.2,napari sif file reader,This is a simple wraper to read .sif format files from Andor Technology.,Ruben Lopez,BSD-3-Clause,https://github.com/rjlopez2/napari-sif-reader,6435db243639b3445e546e47,['conda'],,https://github.com/rjlopez2/napari-sif-reader,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-sif-reader,http://api.anaconda.org/packages/conda-forge/napari-sif-reader,http://anaconda.org/conda-forge/napari-sif-reader,"['0.0.1', '0.0.2']",0.0.2,0.0.2,['noarch'],5.0,https://github.com/rjlopez2/napari-sif-reader,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-sif-reader/0.0.1,1.0,0.0,2023-04-11 22:11:46.424000+00:00,2023-11-06 23:38:32.565000+00:00,conda,noarch/napari-sif-reader-0.0.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['numpy', 'python >=3.8', 'sif-parser']",noarch,1681251041811.0,None-any-None,pyhd8ed1ab_0,2023-04-11 22:11:46.824000+00:00,ee790ed27576e57f7f5185ce64e5589c,218787f3740d476a9ca8f02e95ff9cf72628ee5966ef3755709b6269850c71e1,12283.0,conda-forge/napari-sif-reader/0.0.1/noarch/napari-sif-reader-0.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-sif-reader/0.0.1/noarch/napari-sif-reader-0.0.1-pyhd8ed1ab_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-sif-reader.get_reader,Open data with napari sif file reader,napari_sif_reader._reader:napari_get_reader,napari-sif-reader.get_reader,['*.sif'],False,2.1,napari-sif-reader,0.0.2,,This is a simple wraper to read .sif format files from Andor Technology.,"# napari-sif-reader +",text/markdown,,Johannes Soltwedel,johannes_richard.soltwedel@tu-dresden.de,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'vedo', 'pandas', 'napari', 'napari-stress', 'napari-process-points-and-surfaces', 'pyfmaps', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""PyQt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/jo-mueller/napari-shape-odyssey/issues', 'Documentation, https://jo-mueller.github.io/napari-shape-odyssey/intro.html', 'Source Code, https://github.com/jo-mueller/napari-shape-odyssey', 'User Support, https://github.com/jo-mueller/napari-shape-odyssey/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-shape-odyssey.make_sample_data,Load sample data from shape odyssey,napari_shape_odyssey._sample_data:generate_polka_dot_surface,napari-shape-odyssey.unwrapping_sphere,Unwrap surface into sphere,napari_shape_odyssey._unwrapping.unwrap:map_surface_to_sphere,napari-shape-odyssey.unwrapping_disk,Unwrap surface into disk,napari_shape_odyssey._unwrapping.unwrap:map_surface_to_disk,napari-shape-odyssey.shape_fingerprint_spectral,Spectral shape analysis,True,napari-shape-odyssey.laplace_beltrami_expansion,Approximate intensity in LBO basis,True,napari-shape-odyssey.heat_kernel_signature,Heat kernel signature,True,napari-shape-odyssey.wave_kernel_signature,Wave kernel signature,True,napari-shape-odyssey.mercator_projection,Mercator projection,napari_shape_odyssey._unwrapping.projections:mercator_projection,napari-shape-odyssey.write_multiple,"['image*', 'labels*']",,napari-shape-odyssey.write_single_image,['image'],['.npy'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-shape-odyssey.shape_fingerprint_spectral,Spectral shape analysis,napari_shape_odyssey._spectral:_shape_fingerprint,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-shape-odyssey.laplace_beltrami_expansion,Approximate intensity in LBO basis,napari_shape_odyssey._spectral:expand_intensity_on_surface,napari-shape-odyssey.heat_kernel_signature,Heat kernel signature,napari_shape_odyssey._signatures.signatures:_heat_kernel_signature,napari-shape-odyssey.wave_kernel_signature,Wave kernel signature,napari_shape_odyssey._signatures.signatures:_wave_kernel_signature,napari-shape-odyssey.landmark_widget,Show shape correspondencens,napari_shape_odyssey._signatures.landmarks:CorrespondenceWidget,,,,,napari-shape-odyssey.landmark_widget,Show shape correspondencens,False,napari-shape-odyssey.unwrapping_sphere,Unwrap surface into sphere,True,napari-shape-odyssey.unwrapping_disk,Unwrap surface into disk,True,napari-shape-odyssey.mercator_projection,Mercator projection,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +337,napari-sif-reader,0.0.2,napari sif file reader,This is a simple wraper to read .sif format files from Andor Technology.,Ruben Lopez,BSD-3-Clause,https://github.com/rjlopez2/napari-sif-reader,6435db243639b3445e546e47,['conda'],,https://github.com/rjlopez2/napari-sif-reader,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-sif-reader,http://api.anaconda.org/packages/conda-forge/napari-sif-reader,http://anaconda.org/conda-forge/napari-sif-reader,"['0.0.1', '0.0.2']",0.0.2,0.0.2,['noarch'],5.0,https://github.com/rjlopez2/napari-sif-reader,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-sif-reader/0.0.1,1.0,0.0,2023-04-11 22:11:46.424000+00:00,2023-11-06 23:38:32.565000+00:00,conda,noarch/napari-sif-reader-0.0.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['numpy', 'python >=3.8', 'sif-parser']",noarch,1681251041811.0,None-any-None,pyhd8ed1ab_0,2023-04-11 22:11:46.824000+00:00,ee790ed27576e57f7f5185ce64e5589c,218787f3740d476a9ca8f02e95ff9cf72628ee5966ef3755709b6269850c71e1,12283.0,conda-forge/napari-sif-reader/0.0.1/noarch/napari-sif-reader-0.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-sif-reader/0.0.1/noarch/napari-sif-reader-0.0.1-pyhd8ed1ab_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-sif-reader.get_reader,Open data with napari sif file reader,napari_sif_reader._reader:napari_get_reader,napari-sif-reader.get_reader,['*.sif'],False,2.1,napari-sif-reader,0.0.2,,This is a simple wraper to read .sif format files from Andor Technology.,"# napari-sif-reader [![License BSD-3](https://img.shields.io/pypi/l/napari-sif-reader.svg?color=green)](https://github.com/rjlopez2/napari-sif-reader/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-sif-reader.svg?color=green)](https://pypi.org/project/napari-sif-reader) @@ -33650,8 +35067,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/rjlopez2/napari-sif-reader,Ruben Lopez,rjlopez2@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'sif-parser', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pillow ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/rjlopez2/napari-sif-reader/issues', 'Documentation, https://github.com/rjlopez2/napari-sif-reader#README.md', 'Source Code, https://github.com/rjlopez2/napari-sif-reader', 'User Support, https://github.com/rjlopez2/napari-sif-reader/issues']",['testing'],False,0.0.2,conda-forge/napari-sif-reader/0.0.2,,,,,conda,noarch/napari-sif-reader-0.0.2-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['numpy', 'python >=3.8', 'sif-parser']",pyhd8ed1ab_0,1699313856059.0,None-any-None,noarch,2023-11-06 23:38:31.059000+00:00,827f652e99ac221849c276eab2417771,40d06014d90332f300241d8eba1521acbe07cf839c12cb5377f723fd40ce5222,12692.0,conda-forge/napari-sif-reader/0.0.2/noarch/napari-sif-reader-0.0.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-sif-reader/0.0.2/noarch/napari-sif-reader-0.0.2-pyhd8ed1ab_0.conda,conda,0.0.2,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-sif-reader.make_sample_data,Load sample data from napari sif file reader,napari_sif_reader._sample_data:make_sample_data,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-sif-reader.make_sample_data,unique_id.1,napari sif file reader,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -324,napari-sift-registration,0.1.2,SIFTReg,"Simple plugin for SIFT keypoint detection, and affine registration with RANSAC, based on scikit-image",John Fozard,BSD-3-Clause,https://github.com/jfozard/napari-sift-registration,62fe5653e03aa0544c9f8984,['conda'],,https://github.com/jfozard/napari-sift-registration,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-sift-registration,http://api.anaconda.org/packages/conda-forge/napari-sift-registration,http://anaconda.org/conda-forge/napari-sift-registration,['0.1.2'],0.1.2,0.1.2,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.2,conda-forge/napari-sift-registration/0.1.2,1.0,0.0,2022-08-18 15:10:08.924000+00:00,2023-06-18 08:42:20.577000+00:00,conda,noarch/napari-sift-registration-0.1.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image']",noarch,1660835280106.0,None-any-None,pyhd8ed1ab_0,2022-08-18 15:10:09.348000+00:00,14bb6bd49d6d023c0ded8b73227ee9bc,e18ffa317d0722238ea93f5bb001d16e6b5d6912c0a012819d48edd1bf33ece9,11490.0,conda-forge/napari-sift-registration/0.1.2/noarch/napari-sift-registration-0.1.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-sift-registration/0.1.2/noarch/napari-sift-registration-0.1.2-pyhd8ed1ab_0.tar.bz2,conda,0.1.2,conda-forge,['main'],public,,0.2.1,napari-sift-registration.make_magic_widget,Affine registration with SIFT keypoints,napari_sift_registration._widget:example_magic_widget,,,,2.1,napari-sift-registration,0.1.2,,"Simple plugin for SIFT keypoint detection, and affine registration with RANSAC, based on scikit-image","# skimage-sift-registration +",text/markdown,https://github.com/rjlopez2/napari-sif-reader,Ruben Lopez,rjlopez2@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'sif-parser', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pillow ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/rjlopez2/napari-sif-reader/issues', 'Documentation, https://github.com/rjlopez2/napari-sif-reader#README.md', 'Source Code, https://github.com/rjlopez2/napari-sif-reader', 'User Support, https://github.com/rjlopez2/napari-sif-reader/issues']",['testing'],False,0.0.2,conda-forge/napari-sif-reader/0.0.2,,,,,conda,noarch/napari-sif-reader-0.0.2-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['numpy', 'python >=3.8', 'sif-parser']",pyhd8ed1ab_0,1699313856059.0,None-any-None,noarch,2023-11-06 23:38:31.059000+00:00,827f652e99ac221849c276eab2417771,40d06014d90332f300241d8eba1521acbe07cf839c12cb5377f723fd40ce5222,12692.0,conda-forge/napari-sif-reader/0.0.2/noarch/napari-sif-reader-0.0.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-sif-reader/0.0.2/noarch/napari-sif-reader-0.0.2-pyhd8ed1ab_0.conda,conda,0.0.2,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-sif-reader.make_sample_data,Load sample data from napari sif file reader,napari_sif_reader._sample_data:make_sample_data,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-sif-reader.make_sample_data,unique_id.1,napari sif file reader,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +338,napari-sift-registration,0.1.2,SIFTReg,"Simple plugin for SIFT keypoint detection, and affine registration with RANSAC, based on scikit-image",John Fozard,BSD-3-Clause,https://github.com/jfozard/napari-sift-registration,62fe5653e03aa0544c9f8984,['conda'],,https://github.com/jfozard/napari-sift-registration,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-sift-registration,http://api.anaconda.org/packages/conda-forge/napari-sift-registration,http://anaconda.org/conda-forge/napari-sift-registration,['0.1.2'],0.1.2,0.1.2,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.2,conda-forge/napari-sift-registration/0.1.2,1.0,0.0,2022-08-18 15:10:08.924000+00:00,2023-06-18 08:42:20.577000+00:00,conda,noarch/napari-sift-registration-0.1.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image']",noarch,1660835280106.0,None-any-None,pyhd8ed1ab_0,2022-08-18 15:10:09.348000+00:00,14bb6bd49d6d023c0ded8b73227ee9bc,e18ffa317d0722238ea93f5bb001d16e6b5d6912c0a012819d48edd1bf33ece9,11490.0,conda-forge/napari-sift-registration/0.1.2/noarch/napari-sift-registration-0.1.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-sift-registration/0.1.2/noarch/napari-sift-registration-0.1.2-pyhd8ed1ab_0.tar.bz2,conda,0.1.2,conda-forge,['main'],public,,0.2.1,napari-sift-registration.make_magic_widget,Affine registration with SIFT keypoints,napari_sift_registration._widget:example_magic_widget,,,,2.1,napari-sift-registration,0.1.2,,"Simple plugin for SIFT keypoint detection, and affine registration with RANSAC, based on scikit-image","# skimage-sift-registration [![License BSD-3](https://img.shields.io/pypi/l/napari-sift-registration.svg?color=green)](https://github.com/jfozard/napari-sift-registration/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-sift-registration.svg?color=green)](https://pypi.org/project/napari-sift-registration) @@ -33765,8 +35182,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/jfozard/napari-sift-registration,John Fozard,john.fozard@gmail.com,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['numpy', 'magicgui', 'qtpy', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/jfozard/napari-sift-registration/issues', 'Documentation, https://github.com/jfozard/napari-sift-registration#README.md', 'Source Code, https://github.com/jfozard/napari-sift-registration', 'User Support, https://github.com/jfozard/napari-sift-registration/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-sift-registration.make_magic_widget,Affine registration with SIFT keypoints,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -325,napari-signal-selector,0.0.3,Napari Signal Selector,"An interactive signal selector for napari, based on napari-matplotlib.",Marcelo Leomil Zoccoler,BSD-3-Clause,https://github.com/zoccoler/napari-signal-selector,653e93c354b59088242441a8,['conda'],,https://pypi.org/project/napari-signal-selector,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-signal-selector,http://api.anaconda.org/packages/conda-forge/napari-signal-selector,http://anaconda.org/conda-forge/napari-signal-selector,['0.0.3'],0.0.3,0.0.3,['noarch'],3.0,https://github.com/zoccoler/napari-signal-selector,['pyh9208f05_0'],0.0.3,conda-forge/napari-signal-selector/0.0.3,1.0,0.0,2023-10-29 17:17:53.025000+00:00,2023-10-29 17:17:55.832000+00:00,conda,noarch/napari-signal-selector-0.0.3-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['cmap', 'magicgui', 'napari-matplotlib >=1.1.0', 'napari-skimage-regionprops', 'numpy', 'python >=3.8', 'qtpy']",noarch,1698599695032.0,None-any-None,pyh9208f05_0,2023-10-29 17:17:53.438000+00:00,22a5fb82205c492c45b51c70d463d7b2,82351d5d02f3bdf6574838838b14490584f491087899acdc35839e72cfe48da3,510126.0,conda-forge/napari-signal-selector/0.0.3/noarch/napari-signal-selector-0.0.3-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-signal-selector/0.0.3/noarch/napari-signal-selector-0.0.3-pyh9208f05_0.conda,conda,0.0.3,conda-forge,['main'],public,,0.2.1,napari-signal-selector.load_flashing_polygons_data,Load sample data from Napari Signal Selector,napari_signal_selector._sample_data:load_flashing_polygons_data,,,,2.1,napari-signal-selector,0.0.3,,"An interactive signal selector for napari, based on napari-matplotlib.","# napari-signal-selector +",text/markdown,https://github.com/jfozard/napari-sift-registration,John Fozard,john.fozard@gmail.com,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['numpy', 'magicgui', 'qtpy', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/jfozard/napari-sift-registration/issues', 'Documentation, https://github.com/jfozard/napari-sift-registration#README.md', 'Source Code, https://github.com/jfozard/napari-sift-registration', 'User Support, https://github.com/jfozard/napari-sift-registration/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-sift-registration.make_magic_widget,Affine registration with SIFT keypoints,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +339,napari-signal-selector,0.0.6,Napari Signal Selector,"An interactive signal selector for napari, based on matplotlib.",Marcelo Leomil Zoccoler,BSD-3-Clause,https://github.com/zoccoler/napari-signal-selector,653e93c354b59088242441a8,['conda'],,https://pypi.org/project/napari-signal-selector,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-signal-selector,http://api.anaconda.org/packages/conda-forge/napari-signal-selector,http://anaconda.org/conda-forge/napari-signal-selector,['0.0.3'],0.0.3,0.0.3,['noarch'],3.0,https://github.com/zoccoler/napari-signal-selector,['pyh9208f05_0'],0.0.3,conda-forge/napari-signal-selector/0.0.3,1.0,0.0,2023-10-29 17:17:53.025000+00:00,2023-10-29 17:17:55.832000+00:00,conda,noarch/napari-signal-selector-0.0.3-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['cmap', 'magicgui', 'napari-matplotlib >=1.1.0', 'napari-skimage-regionprops', 'numpy', 'python >=3.8', 'qtpy']",noarch,1698599695032.0,None-any-None,pyh9208f05_0,2023-10-29 17:17:53.438000+00:00,22a5fb82205c492c45b51c70d463d7b2,82351d5d02f3bdf6574838838b14490584f491087899acdc35839e72cfe48da3,510126.0,conda-forge/napari-signal-selector/0.0.3/noarch/napari-signal-selector-0.0.3-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-signal-selector/0.0.3/noarch/napari-signal-selector-0.0.3-pyh9208f05_0.conda,conda,0.0.3,conda-forge,['main'],public,,0.2.1,napari-signal-selector.load_flashing_polygons_data,Load sample data from Napari Signal Selector,napari_signal_selector._sample_data:load_flashing_polygons_data,,,,2.1,napari-signal-selector,0.0.6,,"An interactive signal selector for napari, based on matplotlib.","# napari-signal-selector [![License BSD-3](https://img.shields.io/pypi/l/napari-signal-selector.svg?color=green)](https://github.com/zoccoler/napari-signal-selector/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-signal-selector.svg?color=green)](https://pypi.org/project/napari-signal-selector) @@ -33774,8 +35191,9 @@ If you encounter any problems, please [file an issue] along with a detailed desc [![tests](https://github.com/zoccoler/napari-signal-selector/workflows/tests/badge.svg)](https://github.com/zoccoler/napari-signal-selector/actions) [![codecov](https://codecov.io/gh/zoccoler/napari-signal-selector/branch/main/graph/badge.svg)](https://codecov.io/gh/zoccoler/napari-signal-selector) [![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-signal-selector)](https://napari-hub.org/plugins/napari-signal-selector) +[![DOI](https://zenodo.org/badge/661588266.svg)](https://zenodo.org/doi/10.5281/zenodo.10041219) -An interactive signal selector and annotator for napari, based on [napari-matplotlib](https://github.com/matplotlib/napari-matplotlib#napari-matplotlib). +An interactive signal selector and annotator for napari, based on [matplotlib](https://matplotlib.org/stable/). [Jump to Intallation](#installation) @@ -33869,7 +35287,7 @@ Also, with the selection tool enbaled, by holding 'SHIFT' and left-clicking, you ### Exporting Annotations -The table with annotations can be displayed in napari using the 'Show table' widget from [napari-skimage-regionprops plugin](https://github.com/haesleinhuepf/napari-skimage-regionprops#napari-skimage-regionprops-nsr), which is available under `Tools > Measurements > Show Table (nsr)`. +The table with annotations can be displayed in napari using the 'Show table' widget from [napari-skimage-regionprops plugin](https://github.com/haesleinhuepf/napari-skimage-regionprops#napari-skimage-regionprops-nsr), which is available under `Tools > Measurements > Show Table (nsr)`. This plugin may require a specific napari version, so check its documentation for more details. ![](https://github.com/zoccoler/napari-signal-selector/raw/main/images/table_view.gif) @@ -33877,6 +35295,14 @@ By the way, with `'show selected'` checked, you can click on a label row in the To export the table, click on `'Save as csv...'`. +Another option is to run the following code in the napari console (replace `'Labels'` with the name of your Labels layer and `'annotations.csv'` with the desired file name or file path): + +```python +import pandas as pd +df = viewer.layers['Labels'].data.features +df.to_csv('annotations.csv') +``` + ## Installation You can install `napari-signal-selector` via [pip]. Follow these steps from a terminal. @@ -33932,8 +35358,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/zoccoler/napari-signal-selector,Marcelo Leomil Zoccoler,marzoccoler@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'napari-matplotlib >=1.1.0', 'napari-skimage-regionprops', 'cmap', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/zoccoler/napari-signal-selector/issues', 'Documentation, https://github.com/zoccoler/napari-signal-selector#README.md', 'Source Code, https://github.com/zoccoler/napari-signal-selector', 'User Support, https://github.com/zoccoler/napari-signal-selector/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-signal-selector.make_inter_features_line_widget,Signal Selector,napari_signal_selector.interactive:InteractiveFeaturesLineWidget,,,,,,,napari-signal-selector.make_inter_features_line_widget,Signal Selector,False,,,,,,,,,,,,,,,,,,,,napari-signal-selector.load_flashing_polygons_data,flashing_polygons,Flashing Polygons (2D+t),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -326,napari-sim-processor,0.1.1,napari SIM processor,A plugin to process Structured Illumination Microscopy data with gpu acceleration,Andrea Bassi and Mark Neil,BSD-3-Clause,https://github.com/andreabassi78/napari-sim-processor,62c6aadf76d1913f9f421619,['conda'],,https://github.com/andreabassi78/napari-sim-processor,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-sim-processor,http://api.anaconda.org/packages/conda-forge/napari-sim-processor,http://anaconda.org/conda-forge/napari-sim-processor,"['0.0.8', '0.0.9', '0.0.10', '0.1.0', '0.1.1']",0.1.1,0.1.1,['noarch'],11.0,https://github.com/andreabassi78/napari-sim-processor,['pyhd8ed1ab_0'],0.0.8,conda-forge/napari-sim-processor/0.0.8,1.0,0.0,2022-07-07 09:43:57.364000+00:00,2023-11-07 00:13:28.940000+00:00,conda,noarch/napari-sim-processor-0.0.8-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'superqt >=0.3.2']",noarch,1657186903859.0,None-any-None,pyhd8ed1ab_0,2022-07-07 09:43:57.765000+00:00,1266fc67f49d6fc4a940535f6384adbd,None,43714.0,conda-forge/napari-sim-processor/0.0.8/noarch/napari-sim-processor-0.0.8-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-sim-processor/0.0.8/noarch/napari-sim-processor-0.0.8-pyhd8ed1ab_0.tar.bz2,conda,0.0.8,conda-forge,['main'],public,,0.2.1,napari-sim-processor.make_sim_widget,SIM processor,napari_sim_processor._sim_widget:SimAnalysis,,,,2.1,napari-sim-processor,0.1.1,,A plugin to process Structured Illumination Microscopy data with gpu acceleration,"# napari-sim-processor +",text/markdown,https://github.com/zoccoler/napari-signal-selector,Marcelo Leomil Zoccoler,marzoccoler@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'cmap', 'nap-plot-tools>=0.1.2', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari>=0.4.19; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.8,"['Bug Tracker, https://github.com/zoccoler/napari-signal-selector/issues', 'Documentation, https://github.com/zoccoler/napari-signal-selector#README.md', 'Source Code, https://github.com/zoccoler/napari-signal-selector', 'User Support, https://github.com/zoccoler/napari-signal-selector/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-signal-selector.load_blinking_polygons_data,Load sample data from Napari Signal Selector,napari_signal_selector._sample_data:load_blinking_polygons_data,napari-signal-selector.make_inter_features_line_widget,Signal Selector,napari_signal_selector.interactive:InteractiveFeaturesLineWidget,,,,napari-signal-selector.make_inter_features_line_widget,Signal Selector and Annotator,False,,,,,,,,,,,,,,,,,,,,napari-signal-selector.load_flashing_polygons_data,flashing_polygons,Flashing Polygons (2D+t),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-signal-selector.load_blinking_polygons_data,blinking_polygons,Blinking Polygons (2D+t),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +340,napari-sim-processor,0.1.1,napari SIM processor,A plugin to process Structured Illumination Microscopy data with gpu acceleration,Andrea Bassi and Mark Neil,BSD-3-Clause,https://github.com/andreabassi78/napari-sim-processor,62c6aadf76d1913f9f421619,['conda'],,https://github.com/andreabassi78/napari-sim-processor,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-sim-processor,http://api.anaconda.org/packages/conda-forge/napari-sim-processor,http://anaconda.org/conda-forge/napari-sim-processor,"['0.0.8', '0.0.9', '0.0.10', '0.1.0', '0.1.1']",0.1.1,0.1.1,['noarch'],11.0,https://github.com/andreabassi78/napari-sim-processor,['pyhd8ed1ab_0'],0.0.8,conda-forge/napari-sim-processor/0.0.8,1.0,0.0,2022-07-07 09:43:57.364000+00:00,2023-11-07 00:13:28.940000+00:00,conda,noarch/napari-sim-processor-0.0.8-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'superqt >=0.3.2']",noarch,1657186903859.0,None-any-None,pyhd8ed1ab_0,2022-07-07 09:43:57.765000+00:00,1266fc67f49d6fc4a940535f6384adbd,None,43714.0,conda-forge/napari-sim-processor/0.0.8/noarch/napari-sim-processor-0.0.8-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-sim-processor/0.0.8/noarch/napari-sim-processor-0.0.8-pyhd8ed1ab_0.tar.bz2,conda,0.0.8,conda-forge,['main'],public,,0.2.1,napari-sim-processor.make_sim_widget,SIM processor,napari_sim_processor._sim_widget:SimAnalysis,,,,2.1,napari-sim-processor,0.1.1,,A plugin to process Structured Illumination Microscopy data with gpu acceleration,"# napari-sim-processor [![License](https://img.shields.io/pypi/l/napari-sim-processor.svg?color=green)](https://github.com/andreabassi78/napari-sim-processor/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-sim-processor.svg?color=green)](https://pypi.org/project/napari-sim-processor) @@ -34077,8 +35503,117 @@ If you encounter any problems, please [file an issue] along with a detailed desc [this]: https://doi.org/10.1364/OE.466225 [3dSIM]: https://github.com/andreabassi78/napari-sim-processor/tree/3dSIM [SIMulator]: https://www.napari-hub.org/plugins/napari-generic-SIMulator -",text/markdown,https://github.com/andreabassi78/napari-sim-processor,Andrea Bassi and Mark Neil,andrea1.bassi@polimi.it,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['numpy', 'scipy', 'magicgui', 'qtpy', 'matplotlib', 'superqt >=0.3.2', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""matplotlib ; extra == 'testing'"", ""numpy ; extra == 'testing'"", ""scipy ; extra == 'testing'"", ""superqt ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/andreabassi78/napari-sim-processor/issues', 'Documentation, https://github.com/andreabassi78/napari-sim-processor#README.md', 'Source Code, https://github.com/andreabassi78/napari-sim-processor', 'User Support, https://github.com/andreabassi78/napari-sim-processor/issues']",['testing'],False,0.0.9,conda-forge/napari-sim-processor/0.0.9,0.0.10,conda-forge/napari-sim-processor/0.0.10,0.1.0,conda-forge/napari-sim-processor/0.1.0,conda,noarch/napari-sim-processor-0.0.9-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image', 'superqt >=0.3.2']",pyhd8ed1ab_0,1660335869634.0,None-any-None,noarch,2022-08-12 20:26:41.742000+00:00,69430ee5b93e6ee658379f8297bba079,None,41967.0,conda-forge/napari-sim-processor/0.0.9/noarch/napari-sim-processor-0.0.9-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-sim-processor/0.0.9/noarch/napari-sim-processor-0.0.9-pyhd8ed1ab_0.tar.bz2,conda,0.0.9,conda-forge,['main'],conda,noarch/napari-sim-processor-0.0.10-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image', 'superqt >=0.3.2']",noarch,1682248807125.0,None-any-None,pyhd8ed1ab_0,2023-04-23 11:21:59.933000+00:00,06edcde93d325455a459f8317e786c8d,8f31e40369fa6107644b78c11b616173fd9ef8b13078a554c2f8d9332696f967,36687.0,conda-forge/napari-sim-processor/0.0.10/noarch/napari-sim-processor-0.0.10-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-sim-processor/0.0.10/noarch/napari-sim-processor-0.0.10-pyhd8ed1ab_0.conda,conda,0.0.10,conda-forge,['main'],conda,noarch/napari-sim-processor-0.1.0-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scipy', 'superqt >=0.3.2']",BSD-3-Clause,python,1699315041581.0,2023-11-06 23:59:29.467000+00:00,36989a870dcff9520e63f46e8984f926,44a391db2d8ab43580f4538795851c8eb1d777548020e2ec871b6f73fc426e9c,37084.0,conda-forge/napari-sim-processor/0.1.0/noarch/napari-sim-processor-0.1.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-sim-processor/0.1.0/noarch/napari-sim-processor-0.1.0-pyhd8ed1ab_0.conda,conda,0.1.0,conda-forge,['main'],,napari-sim-processor.make_reshape_widget,Reshape stack,napari_sim_processor._sim_widget:reshape,,,,,,,napari-sim-processor.make_sim_widget,SIM processor,False,napari-sim-processor.make_reshape_widget,"Reshape stack to 5D (angles,phases,z,y,x)",False,,,,,,,,,,,,,,,,,,,,0.1.1,conda-forge/napari-sim-processor/0.1.1,,,,,conda,noarch/napari-sim-processor-0.1.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scipy', 'superqt >=0.3.2']",noarch,1699315865085.0,None-any-None,pyhd8ed1ab_0,2023-11-07 00:13:26.787000+00:00,b693007e137fb078f6b4f71edbc7ec24,c5f25213b0d5823ab84fba8e9d854e4777c60b45b9d7dfe04dee0921ba6c70b7,38412.0,conda-forge/napari-sim-processor/0.1.1/noarch/napari-sim-processor-0.1.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-sim-processor/0.1.1/noarch/napari-sim-processor-0.1.1-pyhd8ed1ab_0.conda,conda,0.1.1,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -327,napari-simpleannotate,0.0.5,SimpleAnnotate,A simple plugin to label image,Hiroki Kawai,BSD-3-Clause,https://github.com/hiroalchem/napari-simpleannotate,65592eb099970d1eeeb01b46,['conda'],,https://pypi.org/project/napari-simpleannotate,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-simpleannotate,http://api.anaconda.org/packages/conda-forge/napari-simpleannotate,http://anaconda.org/conda-forge/napari-simpleannotate,"['0.0.3', '0.0.5']",0.0.5,0.0.5,['noarch'],7.0,https://github.com/hiroalchem/napari-simpleannotate,['pyh9208f05_0'],0.0.3,conda-forge/napari-simpleannotate/0.0.3,1.0,0.0,2023-11-18 21:37:50.112000+00:00,2024-08-06 13:03:23.204000+00:00,conda,noarch/napari-simpleannotate-0.0.3-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'numpy', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image']",noarch,1700343368910.0,None-any-None,pyh9208f05_0,2023-11-18 21:37:50.480000+00:00,3b050926de246e55fee5aa29028c7de1,d65a5bda17392ab7d178c339146f2a2236062f3e57112a15567a00284ce82c05,15784.0,conda-forge/napari-simpleannotate/0.0.3/noarch/napari-simpleannotate-0.0.3-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-simpleannotate/0.0.3/noarch/napari-simpleannotate-0.0.3-pyh9208f05_0.conda,conda,0.0.3,conda-forge,['main'],public,,0.2.1,napari-simpleannotate.make_bboxwidget,Bbox annotation,napari_simpleannotate._bbox_widget:BboxQWidget,,,,2.1,napari-simpleannotate,0.0.5,,A simple plugin to label image,"# napari-simpleannotate +",text/markdown,https://github.com/andreabassi78/napari-sim-processor,Andrea Bassi and Mark Neil,andrea1.bassi@polimi.it,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['numpy', 'scipy', 'magicgui', 'qtpy', 'matplotlib', 'superqt >=0.3.2', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""matplotlib ; extra == 'testing'"", ""numpy ; extra == 'testing'"", ""scipy ; extra == 'testing'"", ""superqt ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/andreabassi78/napari-sim-processor/issues', 'Documentation, https://github.com/andreabassi78/napari-sim-processor#README.md', 'Source Code, https://github.com/andreabassi78/napari-sim-processor', 'User Support, https://github.com/andreabassi78/napari-sim-processor/issues']",['testing'],False,0.0.9,conda-forge/napari-sim-processor/0.0.9,0.0.10,conda-forge/napari-sim-processor/0.0.10,0.1.0,conda-forge/napari-sim-processor/0.1.0,conda,noarch/napari-sim-processor-0.0.9-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image', 'superqt >=0.3.2']",pyhd8ed1ab_0,1660335869634.0,None-any-None,noarch,2022-08-12 20:26:41.742000+00:00,69430ee5b93e6ee658379f8297bba079,None,41967.0,conda-forge/napari-sim-processor/0.0.9/noarch/napari-sim-processor-0.0.9-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-sim-processor/0.0.9/noarch/napari-sim-processor-0.0.9-pyhd8ed1ab_0.tar.bz2,conda,0.0.9,conda-forge,['main'],conda,noarch/napari-sim-processor-0.0.10-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image', 'superqt >=0.3.2']",noarch,1682248807125.0,None-any-None,pyhd8ed1ab_0,2023-04-23 11:21:59.933000+00:00,06edcde93d325455a459f8317e786c8d,8f31e40369fa6107644b78c11b616173fd9ef8b13078a554c2f8d9332696f967,36687.0,conda-forge/napari-sim-processor/0.0.10/noarch/napari-sim-processor-0.0.10-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-sim-processor/0.0.10/noarch/napari-sim-processor-0.0.10-pyhd8ed1ab_0.conda,conda,0.0.10,conda-forge,['main'],conda,noarch/napari-sim-processor-0.1.0-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scipy', 'superqt >=0.3.2']",BSD-3-Clause,python,1699315041581.0,2023-11-06 23:59:29.467000+00:00,36989a870dcff9520e63f46e8984f926,44a391db2d8ab43580f4538795851c8eb1d777548020e2ec871b6f73fc426e9c,37084.0,conda-forge/napari-sim-processor/0.1.0/noarch/napari-sim-processor-0.1.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-sim-processor/0.1.0/noarch/napari-sim-processor-0.1.0-pyhd8ed1ab_0.conda,conda,0.1.0,conda-forge,['main'],,napari-sim-processor.make_reshape_widget,Reshape stack,napari_sim_processor._sim_widget:reshape,,,,,,,napari-sim-processor.make_sim_widget,SIM processor,False,napari-sim-processor.make_reshape_widget,"Reshape stack to 5D (angles,phases,z,y,x)",False,,,,,,,,,,,,,,,,,,,,0.1.1,conda-forge/napari-sim-processor/0.1.1,,,,,conda,noarch/napari-sim-processor-0.1.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scipy', 'superqt >=0.3.2']",noarch,1699315865085.0,None-any-None,pyhd8ed1ab_0,2023-11-07 00:13:26.787000+00:00,b693007e137fb078f6b4f71edbc7ec24,c5f25213b0d5823ab84fba8e9d854e4777c60b45b9d7dfe04dee0921ba6c70b7,38412.0,conda-forge/napari-sim-processor/0.1.1/noarch/napari-sim-processor-0.1.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-sim-processor/0.1.1/noarch/napari-sim-processor-0.1.1-pyhd8ed1ab_0.conda,conda,0.1.1,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +341,napari-simple-orthoviewer,0.0.5,Orthogonal Viewer,A simple orthogonal viewer in napari,Krishnan Venkataraman," +Copyright (c) 2024, Krishnan Venkataraman +All rights reserved. + +Redistribution and use in source and binary forms, with or without +modification, are permitted provided that the following conditions are met: + +* Redistributions of source code must retain the above copyright notice, this + list of conditions and the following disclaimer. + +* Redistributions in binary form must reproduce the above copyright notice, + this list of conditions and the following disclaimer in the documentation + and/or other materials provided with the distribution. + +* Neither the name of copyright holder nor the names of its + contributors may be used to endorse or promote products derived from + this software without specific prior written permission. + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ""AS IS"" +AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE +IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE +DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE +FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL +DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR +SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER +CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, +OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE +OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. +",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-simple-orthoviewer.make_qwidget,Orthoview,napari_simple_orthoviewer:Ortho_control,,,,2.1,napari-simple-orthoviewer,0.0.5,,A simple orthogonal viewer in napari,"# napari-simple-orthoviewer + +A simple orthogonal viewer in napari + +---------------------------------- +## Installation + +You can install `napari-simple-orthoviewer` via [pip]: + + pip install napari-simple-orthoviewer + + + +To install latest development version : + + pip install git+https://github.com/Krishvraman/napari-simple-orthoviewer.git + + +## Usage + +![ortho_views_with_overlay](https://github.com/user-attachments/assets/33c00852-13b8-42ca-aa37-cbd28743297c) + + + + +## License + +Distributed under the terms of the [BSD-3] license, +""napari-simple-orthoviewer"" is free and open source software + +## Issues + +If you encounter any problems, please [file an issue] along with a detailed description. + + +[napari]: https://github.com/napari/napari +[Cookiecutter]: https://github.com/audreyr/cookiecutter +[@napari]: https://github.com/napari +[MIT]: http://opensource.org/licenses/MIT +[BSD-3]: http://opensource.org/licenses/BSD-3-Clause +[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt +[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt +[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0 +[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt +[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin + +[file an issue]: https://github.com/Krishvraman/napari-simple-orthoviewer/issues + +[napari]: https://github.com/napari/napari +[tox]: https://tox.readthedocs.io/en/latest/ +[pip]: https://pypi.org/project/pip/ +[PyPI]: https://pypi.org/ +",text/markdown,,Krishnan Venkataraman,krishvraman95@gmail.com," +Copyright (c) 2024, Krishnan Venkataraman +All rights reserved. + +Redistribution and use in source and binary forms, with or without +modification, are permitted provided that the following conditions are met: + +* Redistributions of source code must retain the above copyright notice, this + list of conditions and the following disclaimer. + +* Redistributions in binary form must reproduce the above copyright notice, + this list of conditions and the following disclaimer in the documentation + and/or other materials provided with the distribution. + +* Neither the name of copyright holder nor the names of its + contributors may be used to endorse or promote products derived from + this software without specific prior written permission. + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ""AS IS"" +AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE +IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE +DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE +FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL +DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR +SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER +CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, +OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE +OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'matplotlib', 'tifffile', 'napari', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.9,"['Bug Tracker, https://github.com/Krishvraman/napari-simple-orthoviewer/issues', 'Documentation, https://github.com/Krishvraman/napari-simple-orthoviewer#README.md', 'Source Code, https://github.com/Krishvraman/napari-simple-orthoviewer', 'User Support, https://github.com/Krishvraman/napari-simple-orthoviewer/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Utilities', 'Visualization']",,,,,,,,,,napari-simple-orthoviewer.make_qwidget,Orthoview,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +342,napari-simpleannotate,0.0.5,SimpleAnnotate,A simple plugin to label image,Hiroki Kawai,BSD-3-Clause,https://github.com/hiroalchem/napari-simpleannotate,65592eb099970d1eeeb01b46,['conda'],,https://pypi.org/project/napari-simpleannotate,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-simpleannotate,http://api.anaconda.org/packages/conda-forge/napari-simpleannotate,http://anaconda.org/conda-forge/napari-simpleannotate,"['0.0.3', '0.0.5']",0.0.5,0.0.5,['noarch'],7.0,https://github.com/hiroalchem/napari-simpleannotate,['pyh9208f05_0'],0.0.3,conda-forge/napari-simpleannotate/0.0.3,1.0,0.0,2023-11-18 21:37:50.112000+00:00,2024-08-06 13:03:23.204000+00:00,conda,noarch/napari-simpleannotate-0.0.3-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'numpy', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image']",noarch,1700343368910.0,None-any-None,pyh9208f05_0,2023-11-18 21:37:50.480000+00:00,3b050926de246e55fee5aa29028c7de1,d65a5bda17392ab7d178c339146f2a2236062f3e57112a15567a00284ce82c05,15784.0,conda-forge/napari-simpleannotate/0.0.3/noarch/napari-simpleannotate-0.0.3-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-simpleannotate/0.0.3/noarch/napari-simpleannotate-0.0.3-pyh9208f05_0.conda,conda,0.0.3,conda-forge,['main'],public,,0.2.1,napari-simpleannotate.make_bboxwidget,Bbox annotation,napari_simpleannotate._bbox_widget:BboxQWidget,,,,2.1,napari-simpleannotate,0.0.5,,A simple plugin to label image,"# napari-simpleannotate [![License BSD-3](https://img.shields.io/pypi/l/napari-simpleannotate.svg?color=green)](https://github.com/hiroalchem/napari-simpleannotate/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-simpleannotate.svg?color=green)](https://pypi.org/project/napari-simpleannotate) @@ -34168,8 +35703,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/hiroalchem/napari-simpleannotate,Hiroki Kawai,h.kawai888@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'pyyaml', 'qtpy', 'scikit-image', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.8,"['Bug Tracker, https://github.com/hiroalchem/napari-simpleannotate/issues', 'Documentation, https://github.com/hiroalchem/napari-simpleannotate#README.md', 'Source Code, https://github.com/hiroalchem/napari-simpleannotate', 'User Support, https://github.com/hiroalchem/napari-simpleannotate/issues']",['testing'],False,0.0.5,conda-forge/napari-simpleannotate/0.0.5,,,,,conda,noarch/napari-simpleannotate-0.0.5-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'numpy', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image']",pyh9208f05_0,1722949338050.0,None-any-None,noarch,2024-08-06 13:03:21.521000+00:00,5b640f8c6244fd51fcb7d6e91f922fea,efd0824f57b071467890fa7ebfc9ddb366c0546b71991f3fba81bb5c8ea91f43,15880.0,conda-forge/napari-simpleannotate/0.0.5/noarch/napari-simpleannotate-0.0.5-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-simpleannotate/0.0.5/noarch/napari-simpleannotate-0.0.5-pyh9208f05_0.conda,conda,0.0.5,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-simpleannotate.make_bboxwidget,Bbox annotation,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -328,napari-simpleitk-image-processing,0.4.7,napari-simpleitk-image-processing,Process and analyze images using SimpleITK in napari,Robert Haase,BSD-3-Clause,https://github.com/haesleinhuepf/napari-simpleitk-image-processing,61fe7489302e80ce8c7f50ab,['conda'],,https://github.com/haesleinhuepf/napari-simpleitk-image-processing,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-simpleitk-image-processing,http://api.anaconda.org/packages/conda-forge/napari-simpleitk-image-processing,http://anaconda.org/conda-forge/napari-simpleitk-image-processing,"['0.2.1', '0.2.3', '0.2.4', '0.2.7', '0.3.0', '0.3.1', '0.4.0', '0.4.1', '0.4.2', '0.4.3', '0.4.4', '0.4.5', '0.4.7']",0.4.7,0.4.7,['noarch'],29.0,,"['pyhd0adb26_0', 'pyhd8ed1ab_0']",0.2.1,conda-forge/napari-simpleitk-image-processing/0.2.1,1.0,0.0,2022-02-05 12:58:47.566000+00:00,2024-09-30 05:52:13.402000+00:00,conda,noarch/napari-simpleitk-image-processing-0.2.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'simpleitk']",noarch,1644065719997.0,None-any-None,pyhd8ed1ab_0,2022-02-05 12:58:47.803000+00:00,69e1ba5de2ca0da42655bb1ace0a64a8,None,17263.0,conda-forge/napari-simpleitk-image-processing/0.2.1/noarch/napari-simpleitk-image-processing-0.2.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-simpleitk-image-processing/0.2.1/noarch/napari-simpleitk-image-processing-0.2.1-pyhd8ed1ab_0.tar.bz2,conda,0.2.1,conda-forge,['main'],public,,0.2.1,napari-simpleitk-image-processing.napari_experimental_provide_function,median_filter,napari_simpleitk_image_processing._simpleitk_image_processing:median_filter,,,,2.1,napari-simpleitk-image-processing,0.4.7,,Process and analyze images using SimpleITK in napari,"# napari-simpleitk-image-processing (n-SimpleITK) +",text/markdown,https://github.com/hiroalchem/napari-simpleannotate,Hiroki Kawai,h.kawai888@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'pyyaml', 'qtpy', 'scikit-image', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.8,"['Bug Tracker, https://github.com/hiroalchem/napari-simpleannotate/issues', 'Documentation, https://github.com/hiroalchem/napari-simpleannotate#README.md', 'Source Code, https://github.com/hiroalchem/napari-simpleannotate', 'User Support, https://github.com/hiroalchem/napari-simpleannotate/issues']",['testing'],False,0.0.5,conda-forge/napari-simpleannotate/0.0.5,,,,,conda,noarch/napari-simpleannotate-0.0.5-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'numpy', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image']",pyh9208f05_0,1722949338050.0,None-any-None,noarch,2024-08-06 13:03:21.521000+00:00,5b640f8c6244fd51fcb7d6e91f922fea,efd0824f57b071467890fa7ebfc9ddb366c0546b71991f3fba81bb5c8ea91f43,15880.0,conda-forge/napari-simpleannotate/0.0.5/noarch/napari-simpleannotate-0.0.5-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-simpleannotate/0.0.5/noarch/napari-simpleannotate-0.0.5-pyh9208f05_0.conda,conda,0.0.5,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-simpleannotate.make_bboxwidget,Bbox annotation,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +343,napari-simpleitk-image-processing,0.4.9,napari-simpleitk-image-processing,Process and analyze images using SimpleITK in napari,Robert Haase,BSD-3-Clause,https://github.com/haesleinhuepf/napari-simpleitk-image-processing,61fe7489302e80ce8c7f50ab,['conda'],,https://github.com/haesleinhuepf/napari-simpleitk-image-processing,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-simpleitk-image-processing,http://api.anaconda.org/packages/conda-forge/napari-simpleitk-image-processing,http://anaconda.org/conda-forge/napari-simpleitk-image-processing,"['0.2.1', '0.2.3', '0.2.4', '0.2.7', '0.3.0', '0.3.1', '0.4.0', '0.4.1', '0.4.2', '0.4.3', '0.4.4', '0.4.5', '0.4.7', '0.4.8', '0.4.9']",0.4.9,0.4.9,['noarch'],41.0,,"['pyhd0adb26_0', 'pyhd0adb26_1', 'pyhd8ed1ab_0']",0.2.1,conda-forge/napari-simpleitk-image-processing/0.2.1,1.0,0.0,2022-02-05 12:58:47.566000+00:00,2024-12-26 16:30:17.485000+00:00,conda,noarch/napari-simpleitk-image-processing-0.2.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'simpleitk']",noarch,1644065719997.0,None-any-None,pyhd8ed1ab_0,2022-02-05 12:58:47.803000+00:00,69e1ba5de2ca0da42655bb1ace0a64a8,None,17263.0,conda-forge/napari-simpleitk-image-processing/0.2.1/noarch/napari-simpleitk-image-processing-0.2.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-simpleitk-image-processing/0.2.1/noarch/napari-simpleitk-image-processing-0.2.1-pyhd8ed1ab_0.tar.bz2,conda,0.2.1,conda-forge,['main'],public,,0.2.1,napari-simpleitk-image-processing.napari_experimental_provide_function,median_filter,napari_simpleitk_image_processing._simpleitk_image_processing:median_filter,,,,2.1,napari-simpleitk-image-processing,0.4.9,,Process and analyze images using SimpleITK in napari,"# napari-simpleitk-image-processing (n-SimpleITK) [![License](https://img.shields.io/pypi/l/napari-simpleitk-image-processing.svg?color=green)](https://github.com/haesleinhuepf/napari-simpleitk-image-processing/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-simpleitk-image-processing.svg?color=green)](https://pypi.org/project/napari-simpleitk-image-processing) @@ -34387,8 +35922,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/haesleinhuepf/napari-simpleitk-image-processing,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine>=0.1.4', 'numpy', 'simpleitk', 'napari-tools-menu>=0.1.17', 'napari-time-slicer', 'napari-skimage-regionprops>=0.5.1', 'napari-assistant>=0.3.10', 'pandas', 'stackview>=0.3.2']",>=3.8,"['Bug Tracker, https://github.com/haesleinhuepf/napari-simpleitk-image-processing/issues', 'Documentation, https://github.com/haesleinhuepf/napari-simpleitk-image-processing#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-simpleitk-image-processing', 'User Support, https://github.com/haesleinhuepf/napari-simpleitk-image-processing/issues']",,True,0.2.3,conda-forge/napari-simpleitk-image-processing/0.2.3,0.2.4,conda-forge/napari-simpleitk-image-processing/0.2.4,0.2.7,conda-forge/napari-simpleitk-image-processing/0.2.7,conda,noarch/napari-simpleitk-image-processing-0.2.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'simpleitk']",pyhd8ed1ab_0,1647892164436.0,None-any-None,noarch,2022-03-21 19:52:03.646000+00:00,eba7bd3d1213dfe032b439e325f21675,None,17932.0,conda-forge/napari-simpleitk-image-processing/0.2.3/noarch/napari-simpleitk-image-processing-0.2.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-simpleitk-image-processing/0.2.3/noarch/napari-simpleitk-image-processing-0.2.3-pyhd8ed1ab_0.tar.bz2,conda,0.2.3,conda-forge,['main'],conda,noarch/napari-simpleitk-image-processing-0.2.4-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'simpleitk']",noarch,1648316462189.0,None-any-None,pyhd8ed1ab_0,2022-03-26 17:43:38.530000+00:00,0a22a777acb314f6206a94669ce97542,None,17952.0,conda-forge/napari-simpleitk-image-processing/0.2.4/noarch/napari-simpleitk-image-processing-0.2.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-simpleitk-image-processing/0.2.4/noarch/napari-simpleitk-image-processing-0.2.4-pyhd8ed1ab_0.tar.bz2,conda,0.2.4,conda-forge,['main'],conda,noarch/napari-simpleitk-image-processing-0.2.7-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'simpleitk', 'toolz']",BSD-3-Clause,python,1651078816779.0,2022-04-27 17:02:59.892000+00:00,1fe4c650ba60ffe615305ea2899e21f6,None,18144.0,conda-forge/napari-simpleitk-image-processing/0.2.7/noarch/napari-simpleitk-image-processing-0.2.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-simpleitk-image-processing/0.2.7/noarch/napari-simpleitk-image-processing-0.2.7-pyhd8ed1ab_0.tar.bz2,conda,0.2.7,conda-forge,['main'],,napari-simpleitk-image-processing.napari_experimental_provide_function,gaussian_blur,napari_simpleitk_image_processing._simpleitk_image_processing:gaussian_blur,napari-simpleitk-image-processing.napari_experimental_provide_function,threshold_otsu,napari_simpleitk_image_processing._simpleitk_image_processing:threshold_otsu,napari-simpleitk-image-processing.napari_experimental_provide_function,threshold_intermodes,napari_simpleitk_image_processing._simpleitk_image_processing:threshold_intermodes,napari-simpleitk-image-processing.napari_experimental_provide_function,median_filter,True,napari-simpleitk-image-processing.napari_experimental_provide_function,gaussian_blur,True,napari-simpleitk-image-processing.napari_experimental_provide_function,threshold_otsu,True,napari-simpleitk-image-processing.napari_experimental_provide_function,threshold_intermodes,True,napari-simpleitk-image-processing.napari_experimental_provide_function,threshold_kittler_illingworth,napari_simpleitk_image_processing._simpleitk_image_processing:threshold_kittler_illingworth,,,,,,,,,,,0.3.0,conda-forge/napari-simpleitk-image-processing/0.3.0,0.3.1,conda-forge/napari-simpleitk-image-processing/0.3.1,0.4.0,conda-forge/napari-simpleitk-image-processing/0.4.0,conda,noarch/napari-simpleitk-image-processing-0.3.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'simpleitk', 'toolz']",noarch,1652026718551.0,None-any-None,pyhd8ed1ab_0,2022-05-08 16:21:14.626000+00:00,8e207fbcfe72518054a5388d20b5c1cf,None,18153.0,conda-forge/napari-simpleitk-image-processing/0.3.0/noarch/napari-simpleitk-image-processing-0.3.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-simpleitk-image-processing/0.3.0/noarch/napari-simpleitk-image-processing-0.3.0-pyhd8ed1ab_0.tar.bz2,conda,0.3.0,conda-forge,['main'],conda,noarch/napari-simpleitk-image-processing-0.3.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.5.1', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'simpleitk', 'toolz']",noarch,1653823359784.0,None-any-None,pyhd8ed1ab_0,2022-05-29 11:25:27.243000+00:00,bb0dcd2907d6091ed3bfb73ac38e9f37,None,18060.0,conda-forge/napari-simpleitk-image-processing/0.3.1/noarch/napari-simpleitk-image-processing-0.3.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-simpleitk-image-processing/0.3.1/noarch/napari-simpleitk-image-processing-0.3.1-pyhd8ed1ab_0.tar.bz2,conda,0.3.1,conda-forge,['main'],conda,noarch/napari-simpleitk-image-processing-0.4.0-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.5.1', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'simpleitk', 'toolz']",BSD-3-Clause,python,1657479395425.0,2022-07-10 18:58:53.231000+00:00,f9eabde7ec1f8d11590048e448fd5922,None,18566.0,conda-forge/napari-simpleitk-image-processing/0.4.0/noarch/napari-simpleitk-image-processing-0.4.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-simpleitk-image-processing/0.4.0/noarch/napari-simpleitk-image-processing-0.4.0-pyhd8ed1ab_0.tar.bz2,conda,0.4.0,conda-forge,['main'],,,,napari-simpleitk-image-processing.napari_experimental_provide_function,threshold_li,napari_simpleitk_image_processing._simpleitk_image_processing:threshold_li,0.4.1,conda-forge/napari-simpleitk-image-processing/0.4.1,0.4.2,conda-forge/napari-simpleitk-image-processing/0.4.2,conda,noarch/napari-simpleitk-image-processing-0.4.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-assistant >=0.3.10', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.5.1', 'napari-time-slicer', 'napari-tools-menu >=0.1.16', 'numpy', 'python >=3.7', 'simpleitk', 'toolz']",noarch,1659099928500.0,None-any-None,pyhd8ed1ab_0,2022-07-29 13:07:46.893000+00:00,abc9b1c42d28dac8587d7ff26358af1e,None,18802.0,conda-forge/napari-simpleitk-image-processing/0.4.1/noarch/napari-simpleitk-image-processing-0.4.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-simpleitk-image-processing/0.4.1/noarch/napari-simpleitk-image-processing-0.4.1-pyhd8ed1ab_0.tar.bz2,conda,0.4.1,conda-forge,['main'],conda,noarch/napari-simpleitk-image-processing-0.4.2-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-assistant >=0.3.10', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.5.1', 'napari-time-slicer', 'napari-tools-menu >=0.1.16', 'numpy', 'python >=3.7', 'simpleitk', 'toolz']",BSD-3-Clause,python,1660194043012.0,2022-08-11 05:03:12.823000+00:00,e7ae74771650b94ee14d7c73f3735587,None,18832.0,conda-forge/napari-simpleitk-image-processing/0.4.2/noarch/napari-simpleitk-image-processing-0.4.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-simpleitk-image-processing/0.4.2/noarch/napari-simpleitk-image-processing-0.4.2-pyhd8ed1ab_0.tar.bz2,conda,0.4.2,conda-forge,['main'],napari-simpleitk-image-processing.napari_experimental_provide_function,threshold_moments,napari_simpleitk_image_processing._simpleitk_image_processing:threshold_moments,napari-simpleitk-image-processing.napari_experimental_provide_function,threshold_renyi_entropy,napari_simpleitk_image_processing._simpleitk_image_processing:threshold_renyi_entropy,napari-simpleitk-image-processing.napari_experimental_provide_function,threshold_shanbhag,napari_simpleitk_image_processing._simpleitk_image_processing:threshold_shanbhag,napari-simpleitk-image-processing.napari_experimental_provide_function,threshold_yen,napari_simpleitk_image_processing._simpleitk_image_processing:threshold_yen,napari-simpleitk-image-processing.napari_experimental_provide_function,threshold_isodata,napari_simpleitk_image_processing._simpleitk_image_processing:threshold_isodata,napari-simpleitk-image-processing.napari_experimental_provide_function,threshold_triangle,napari_simpleitk_image_processing._simpleitk_image_processing:threshold_triangle,,napari-simpleitk-image-processing.napari_experimental_provide_function,threshold_kittler_illingworth,True,napari-simpleitk-image-processing.napari_experimental_provide_function,threshold_li,True,napari-simpleitk-image-processing.napari_experimental_provide_function,threshold_moments,True,napari-simpleitk-image-processing.napari_experimental_provide_function,threshold_renyi_entropy,True,conda,noarch/napari-simpleitk-image-processing-0.4.3-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-assistant >=0.3.10', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.5.1', 'napari-time-slicer', 'napari-tools-menu >=0.1.17', 'numpy', 'python >=3.7', 'simpleitk', 'stackview >=0.3.2', 'toolz']",BSD-3-Clause,python,1661704415725.0,2022-08-28 16:36:00.549000+00:00,e0d00ac4e3d3246a2a006c3bdcbb3438,None,18895.0,conda-forge/napari-simpleitk-image-processing/0.4.3/noarch/napari-simpleitk-image-processing-0.4.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-simpleitk-image-processing/0.4.3/noarch/napari-simpleitk-image-processing-0.4.3-pyhd8ed1ab_0.tar.bz2,conda,0.4.3,conda-forge,['main'],0.4.3,conda-forge/napari-simpleitk-image-processing/0.4.3,conda,noarch/napari-simpleitk-image-processing-0.4.4-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-assistant >=0.3.10', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.5.1', 'napari-time-slicer', 'napari-tools-menu >=0.1.17', 'numpy', 'python >=3.7', 'simpleitk', 'stackview >=0.3.2', 'toolz']",BSD-3-Clause,1664073017936.0,2022-09-25 02:33:21.248000+00:00,e2061e70b0f1676d3d6291e021b4e4e9,None,19048.0,conda-forge/napari-simpleitk-image-processing/0.4.4/noarch/napari-simpleitk-image-processing-0.4.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-simpleitk-image-processing/0.4.4/noarch/napari-simpleitk-image-processing-0.4.4-pyhd8ed1ab_0.tar.bz2,conda,0.4.4,conda-forge,['main'],conda,noarch/napari-simpleitk-image-processing-0.4.5-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-assistant >=0.3.10', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.5.1', 'napari-time-slicer', 'napari-tools-menu >=0.1.17', 'numpy', 'python >=3.7', 'simpleitk', 'stackview >=0.3.2', 'toolz']",BSD-3-Clause,1673856048849.0,2023-01-16 08:02:50.560000+00:00,b323e7f6a423d51163e6766530e0a48e,0a686ccbd8d23eda7a28e99bb04d3c166a1f009d9c41d8ceae15fffe1ce3fc62,20158.0,conda-forge/napari-simpleitk-image-processing/0.4.5/noarch/napari-simpleitk-image-processing-0.4.5-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-simpleitk-image-processing/0.4.5/noarch/napari-simpleitk-image-processing-0.4.5-pyhd8ed1ab_0.conda,conda,0.4.5,conda-forge,['main'],conda,noarch/napari-simpleitk-image-processing-0.4.7-pyhd0adb26_0.conda,None-any-None,False,noarch,pyhd0adb26_0,0.0,"['napari', 'napari-assistant >=0.3.10', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.5.1', 'napari-time-slicer', 'napari-tools-menu >=0.1.17', 'numpy', 'python >=3.7', 'simpleitk', 'stackview >=0.3.2', 'toolz']",BSD-3-Clause,1727675419890.0,2024-09-30 05:52:10.354000+00:00,009f9c8a894fca0dc49747bd75545556,25d80d92ba994acbb6839a250d679a4477500b7092974516e27247160a04161f,20663.0,conda-forge/napari-simpleitk-image-processing/0.4.7/noarch/napari-simpleitk-image-processing-0.4.7-pyhd0adb26_0.conda,//api.anaconda.org/download/conda-forge/napari-simpleitk-image-processing/0.4.7/noarch/napari-simpleitk-image-processing-0.4.7-pyhd0adb26_0.conda,conda,0.4.7,conda-forge,['main'],,, -329,napari-sketchpose,0.1.8,Sketchpose,A segmentation plugin to adapt Omnipose implementation to partial labelling.,Clément Cazorla,GPL-3.0-only,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-sketchpose.get_reader,Open data with Sketchpose,napari_sketchpose._reader:napari_get_reader,napari-sketchpose.get_reader,['*.npy'],False,2.1,napari-sketchpose,0.1.8,,A segmentation plugin to adapt Omnipose implementation to partial labelling.,"# napari-sketchpose +",text/markdown,https://github.com/haesleinhuepf/napari-simpleitk-image-processing,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine>=0.1.4', 'numpy', 'simpleitk', 'napari-tools-menu>=0.1.17', 'napari-time-slicer', 'napari-skimage-regionprops>=0.5.1', 'napari-assistant>=0.3.10', 'pandas', 'stackview>=0.3.2']",>=3.8,"['Bug Tracker, https://github.com/haesleinhuepf/napari-simpleitk-image-processing/issues', 'Documentation, https://github.com/haesleinhuepf/napari-simpleitk-image-processing#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-simpleitk-image-processing', 'User Support, https://github.com/haesleinhuepf/napari-simpleitk-image-processing/issues']",,True,0.2.3,conda-forge/napari-simpleitk-image-processing/0.2.3,0.2.4,conda-forge/napari-simpleitk-image-processing/0.2.4,0.2.7,conda-forge/napari-simpleitk-image-processing/0.2.7,conda,noarch/napari-simpleitk-image-processing-0.2.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'simpleitk']",pyhd8ed1ab_0,1647892164436.0,None-any-None,noarch,2022-03-21 19:52:03.646000+00:00,eba7bd3d1213dfe032b439e325f21675,None,17932.0,conda-forge/napari-simpleitk-image-processing/0.2.3/noarch/napari-simpleitk-image-processing-0.2.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-simpleitk-image-processing/0.2.3/noarch/napari-simpleitk-image-processing-0.2.3-pyhd8ed1ab_0.tar.bz2,conda,0.2.3,conda-forge,['main'],conda,noarch/napari-simpleitk-image-processing-0.2.4-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'simpleitk']",noarch,1648316462189.0,None-any-None,pyhd8ed1ab_0,2022-03-26 17:43:38.530000+00:00,0a22a777acb314f6206a94669ce97542,None,17952.0,conda-forge/napari-simpleitk-image-processing/0.2.4/noarch/napari-simpleitk-image-processing-0.2.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-simpleitk-image-processing/0.2.4/noarch/napari-simpleitk-image-processing-0.2.4-pyhd8ed1ab_0.tar.bz2,conda,0.2.4,conda-forge,['main'],conda,noarch/napari-simpleitk-image-processing-0.2.7-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'simpleitk', 'toolz']",BSD-3-Clause,python,1651078816779.0,2022-04-27 17:02:59.892000+00:00,1fe4c650ba60ffe615305ea2899e21f6,None,18144.0,conda-forge/napari-simpleitk-image-processing/0.2.7/noarch/napari-simpleitk-image-processing-0.2.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-simpleitk-image-processing/0.2.7/noarch/napari-simpleitk-image-processing-0.2.7-pyhd8ed1ab_0.tar.bz2,conda,0.2.7,conda-forge,['main'],,napari-simpleitk-image-processing.napari_experimental_provide_function,gaussian_blur,napari_simpleitk_image_processing._simpleitk_image_processing:gaussian_blur,napari-simpleitk-image-processing.napari_experimental_provide_function,threshold_otsu,napari_simpleitk_image_processing._simpleitk_image_processing:threshold_otsu,napari-simpleitk-image-processing.napari_experimental_provide_function,threshold_intermodes,napari_simpleitk_image_processing._simpleitk_image_processing:threshold_intermodes,napari-simpleitk-image-processing.napari_experimental_provide_function,median_filter,True,napari-simpleitk-image-processing.napari_experimental_provide_function,gaussian_blur,True,napari-simpleitk-image-processing.napari_experimental_provide_function,threshold_otsu,True,napari-simpleitk-image-processing.napari_experimental_provide_function,threshold_intermodes,True,napari-simpleitk-image-processing.napari_experimental_provide_function,threshold_kittler_illingworth,napari_simpleitk_image_processing._simpleitk_image_processing:threshold_kittler_illingworth,,,,,,,,,,,0.3.0,conda-forge/napari-simpleitk-image-processing/0.3.0,0.3.1,conda-forge/napari-simpleitk-image-processing/0.3.1,0.4.0,conda-forge/napari-simpleitk-image-processing/0.4.0,conda,noarch/napari-simpleitk-image-processing-0.3.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'simpleitk', 'toolz']",noarch,1652026718551.0,None-any-None,pyhd8ed1ab_0,2022-05-08 16:21:14.626000+00:00,8e207fbcfe72518054a5388d20b5c1cf,None,18153.0,conda-forge/napari-simpleitk-image-processing/0.3.0/noarch/napari-simpleitk-image-processing-0.3.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-simpleitk-image-processing/0.3.0/noarch/napari-simpleitk-image-processing-0.3.0-pyhd8ed1ab_0.tar.bz2,conda,0.3.0,conda-forge,['main'],conda,noarch/napari-simpleitk-image-processing-0.3.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.5.1', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'simpleitk', 'toolz']",noarch,1653823359784.0,None-any-None,pyhd8ed1ab_0,2022-05-29 11:25:27.243000+00:00,bb0dcd2907d6091ed3bfb73ac38e9f37,None,18060.0,conda-forge/napari-simpleitk-image-processing/0.3.1/noarch/napari-simpleitk-image-processing-0.3.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-simpleitk-image-processing/0.3.1/noarch/napari-simpleitk-image-processing-0.3.1-pyhd8ed1ab_0.tar.bz2,conda,0.3.1,conda-forge,['main'],conda,noarch/napari-simpleitk-image-processing-0.4.0-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.5.1', 'napari-time-slicer', 'napari-tools-menu', 'numpy', 'python >=3.7', 'simpleitk', 'toolz']",BSD-3-Clause,python,1657479395425.0,2022-07-10 18:58:53.231000+00:00,f9eabde7ec1f8d11590048e448fd5922,None,18566.0,conda-forge/napari-simpleitk-image-processing/0.4.0/noarch/napari-simpleitk-image-processing-0.4.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-simpleitk-image-processing/0.4.0/noarch/napari-simpleitk-image-processing-0.4.0-pyhd8ed1ab_0.tar.bz2,conda,0.4.0,conda-forge,['main'],,,,napari-simpleitk-image-processing.napari_experimental_provide_function,threshold_li,napari_simpleitk_image_processing._simpleitk_image_processing:threshold_li,0.4.1,conda-forge/napari-simpleitk-image-processing/0.4.1,0.4.2,conda-forge/napari-simpleitk-image-processing/0.4.2,conda,noarch/napari-simpleitk-image-processing-0.4.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-assistant >=0.3.10', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.5.1', 'napari-time-slicer', 'napari-tools-menu >=0.1.16', 'numpy', 'python >=3.7', 'simpleitk', 'toolz']",noarch,1659099928500.0,None-any-None,pyhd8ed1ab_0,2022-07-29 13:07:46.893000+00:00,abc9b1c42d28dac8587d7ff26358af1e,None,18802.0,conda-forge/napari-simpleitk-image-processing/0.4.1/noarch/napari-simpleitk-image-processing-0.4.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-simpleitk-image-processing/0.4.1/noarch/napari-simpleitk-image-processing-0.4.1-pyhd8ed1ab_0.tar.bz2,conda,0.4.1,conda-forge,['main'],conda,noarch/napari-simpleitk-image-processing-0.4.2-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-assistant >=0.3.10', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.5.1', 'napari-time-slicer', 'napari-tools-menu >=0.1.16', 'numpy', 'python >=3.7', 'simpleitk', 'toolz']",BSD-3-Clause,python,1660194043012.0,2022-08-11 05:03:12.823000+00:00,e7ae74771650b94ee14d7c73f3735587,None,18832.0,conda-forge/napari-simpleitk-image-processing/0.4.2/noarch/napari-simpleitk-image-processing-0.4.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-simpleitk-image-processing/0.4.2/noarch/napari-simpleitk-image-processing-0.4.2-pyhd8ed1ab_0.tar.bz2,conda,0.4.2,conda-forge,['main'],napari-simpleitk-image-processing.napari_experimental_provide_function,threshold_moments,napari_simpleitk_image_processing._simpleitk_image_processing:threshold_moments,napari-simpleitk-image-processing.napari_experimental_provide_function,threshold_renyi_entropy,napari_simpleitk_image_processing._simpleitk_image_processing:threshold_renyi_entropy,napari-simpleitk-image-processing.napari_experimental_provide_function,threshold_shanbhag,napari_simpleitk_image_processing._simpleitk_image_processing:threshold_shanbhag,napari-simpleitk-image-processing.napari_experimental_provide_function,threshold_yen,napari_simpleitk_image_processing._simpleitk_image_processing:threshold_yen,napari-simpleitk-image-processing.napari_experimental_provide_function,threshold_isodata,napari_simpleitk_image_processing._simpleitk_image_processing:threshold_isodata,,napari-simpleitk-image-processing.napari_experimental_provide_function,threshold_kittler_illingworth,True,napari-simpleitk-image-processing.napari_experimental_provide_function,threshold_li,True,napari-simpleitk-image-processing.napari_experimental_provide_function,threshold_moments,True,napari-simpleitk-image-processing.napari_experimental_provide_function,threshold_renyi_entropy,True,conda,noarch/napari-simpleitk-image-processing-0.4.3-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-assistant >=0.3.10', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.5.1', 'napari-time-slicer', 'napari-tools-menu >=0.1.17', 'numpy', 'python >=3.7', 'simpleitk', 'stackview >=0.3.2', 'toolz']",BSD-3-Clause,python,1661704415725.0,2022-08-28 16:36:00.549000+00:00,e0d00ac4e3d3246a2a006c3bdcbb3438,None,18895.0,conda-forge/napari-simpleitk-image-processing/0.4.3/noarch/napari-simpleitk-image-processing-0.4.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-simpleitk-image-processing/0.4.3/noarch/napari-simpleitk-image-processing-0.4.3-pyhd8ed1ab_0.tar.bz2,conda,0.4.3,conda-forge,['main'],conda,noarch/napari-simpleitk-image-processing-0.4.4-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-assistant >=0.3.10', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.5.1', 'napari-time-slicer', 'napari-tools-menu >=0.1.17', 'numpy', 'python >=3.7', 'simpleitk', 'stackview >=0.3.2', 'toolz']",BSD-3-Clause,python,1664073017936.0,2022-09-25 02:33:21.248000+00:00,e2061e70b0f1676d3d6291e021b4e4e9,None,19048.0,conda-forge/napari-simpleitk-image-processing/0.4.4/noarch/napari-simpleitk-image-processing-0.4.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-simpleitk-image-processing/0.4.4/noarch/napari-simpleitk-image-processing-0.4.4-pyhd8ed1ab_0.tar.bz2,conda,0.4.4,conda-forge,['main'],0.4.3,conda-forge/napari-simpleitk-image-processing/0.4.3,conda,noarch/napari-simpleitk-image-processing-0.4.5-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-assistant >=0.3.10', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.5.1', 'napari-time-slicer', 'napari-tools-menu >=0.1.17', 'numpy', 'python >=3.7', 'simpleitk', 'stackview >=0.3.2', 'toolz']",BSD-3-Clause,1673856048849.0,2023-01-16 08:02:50.560000+00:00,b323e7f6a423d51163e6766530e0a48e,0a686ccbd8d23eda7a28e99bb04d3c166a1f009d9c41d8ceae15fffe1ce3fc62,20158.0,conda-forge/napari-simpleitk-image-processing/0.4.5/noarch/napari-simpleitk-image-processing-0.4.5-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-simpleitk-image-processing/0.4.5/noarch/napari-simpleitk-image-processing-0.4.5-pyhd8ed1ab_0.conda,conda,0.4.5,conda-forge,['main'],0.4.4,conda-forge/napari-simpleitk-image-processing/0.4.4,conda,noarch/napari-simpleitk-image-processing-0.4.7-pyhd0adb26_0.conda,None-any-None,False,noarch,pyhd0adb26_0,0.0,"['napari', 'napari-assistant >=0.3.10', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.5.1', 'napari-time-slicer', 'napari-tools-menu >=0.1.17', 'numpy', 'python >=3.7', 'simpleitk', 'stackview >=0.3.2', 'toolz']",BSD-3-Clause,1727675419890.0,2024-09-30 05:52:10.354000+00:00,009f9c8a894fca0dc49747bd75545556,25d80d92ba994acbb6839a250d679a4477500b7092974516e27247160a04161f,20663.0,conda-forge/napari-simpleitk-image-processing/0.4.7/noarch/napari-simpleitk-image-processing-0.4.7-pyhd0adb26_0.conda,//api.anaconda.org/download/conda-forge/napari-simpleitk-image-processing/0.4.7/noarch/napari-simpleitk-image-processing-0.4.7-pyhd0adb26_0.conda,conda,0.4.7,conda-forge,['main'],conda,noarch/napari-simpleitk-image-processing-0.4.8-pyhd0adb26_0.conda,None-any-None,False,noarch,pyhd0adb26_0,0.0,"['napari', 'napari-assistant >=0.3.10', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.5.1', 'napari-time-slicer', 'napari-tools-menu >=0.1.17', 'numpy', 'python >=3.7', 'simpleitk', 'stackview >=0.3.2', 'toolz']",BSD-3-Clause,2024-10-11 06:05:05.579000+00:00,8e2ebcf7036409d178f596e05a590c8e,819cf4006e44c84b4262348d983f5d1bd30d6465575fa75b58d160969a00d3c4,20557.0,conda-forge/napari-simpleitk-image-processing/0.4.8/noarch/napari-simpleitk-image-processing-0.4.8-pyhd0adb26_0.conda,//api.anaconda.org/download/conda-forge/napari-simpleitk-image-processing/0.4.8/noarch/napari-simpleitk-image-processing-0.4.8-pyhd0adb26_0.conda,conda,0.4.8,conda-forge,['main'],,, +344,napari-sketchpose,0.1.8,Sketchpose,A segmentation plugin to adapt Omnipose implementation to partial labelling.,Clément Cazorla,GPL-3.0-only,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-sketchpose.get_reader,Open data with Sketchpose,napari_sketchpose._reader:napari_get_reader,napari-sketchpose.get_reader,['*.npy'],False,2.1,napari-sketchpose,0.1.8,,A segmentation plugin to adapt Omnipose implementation to partial labelling.,"# napari-sketchpose [![License GNU GPL v3.0](https://img.shields.io/pypi/l/napari-sketchpose.svg?color=green)](https://github.com/koopa31/napari-sketchpose/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-sketchpose.svg?color=green)](https://pypi.org/project/napari-sketchpose) @@ -34493,8 +36028,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ [documentation]: https://sketchpose-doc.readthedocs.io/en/latest/ -",text/markdown,,Clément Cazorla,clement.cazorla31@gmail.com,GPL-3.0-only,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'cellpose-omni ==0.9.1', 'omnipose ==0.4.4', 'pyqtgraph ==0.13.3', 'matplotlib', 'light-the-torch', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://bitbucket.org/koopa31/napari-sketchpose/issues?status=new&status=open&status=submitted&is_spam=!spam', 'Documentation, https://sketchpose-doc.readthedocs.io/en/latest/', 'Source Code, https://bitbucket.org/koopa31/napari-sketchpose/src/master', 'User Support, https://bitbucket.org/koopa31/napari-sketchpose/issues?status=new&status=open&status=submitted&is_spam=!spam']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-sketchpose.write_multiple,Save multi-layer data with Sketchpose,napari_sketchpose._writer:write_multiple,napari-sketchpose.write_single_image,Save image data with Sketchpose,napari_sketchpose._writer:write_single_image,napari-sketchpose.make_sample_data,Load sample data from Sketchpose,napari_sketchpose._sample_data:make_sample_data,napari-sketchpose.make_qwidget,Sketchpose,False,,,,,,,,,,napari-sketchpose.make_qwidget,Make example QWidget,napari_sketchpose._widget:Dessin,napari-sketchpose.write_multiple,"['image*', 'labels*']",,napari-sketchpose.write_single_image,['image'],['.npy'],,napari-sketchpose.make_sample_data,unique_id.1,Sketchpose,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-sketchpose.make_magic_widget,Make example magic widget,napari_sketchpose._widget:example_magic_widget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-sketchpose.make_func_widget,Make example function widget,napari_sketchpose._widget:example_function_widget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -330,napari-skimage,0.4.0,napari skimage,A plugin to apply scikit-image operations,Guillaume Witz," +",text/markdown,,Clément Cazorla,clement.cazorla31@gmail.com,GPL-3.0-only,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'cellpose-omni ==0.9.1', 'omnipose ==0.4.4', 'pyqtgraph ==0.13.3', 'matplotlib', 'light-the-torch', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://bitbucket.org/koopa31/napari-sketchpose/issues?status=new&status=open&status=submitted&is_spam=!spam', 'Documentation, https://sketchpose-doc.readthedocs.io/en/latest/', 'Source Code, https://bitbucket.org/koopa31/napari-sketchpose/src/master', 'User Support, https://bitbucket.org/koopa31/napari-sketchpose/issues?status=new&status=open&status=submitted&is_spam=!spam']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-sketchpose.write_multiple,Save multi-layer data with Sketchpose,napari_sketchpose._writer:write_multiple,napari-sketchpose.write_single_image,Save image data with Sketchpose,napari_sketchpose._writer:write_single_image,napari-sketchpose.make_sample_data,Load sample data from Sketchpose,napari_sketchpose._sample_data:make_sample_data,napari-sketchpose.make_qwidget,Sketchpose,False,,,,,,,,,,napari-sketchpose.make_qwidget,Make example QWidget,napari_sketchpose._widget:Dessin,napari-sketchpose.write_multiple,"['image*', 'labels*']",,napari-sketchpose.write_single_image,['image'],['.npy'],,napari-sketchpose.make_sample_data,unique_id.1,Sketchpose,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-sketchpose.make_magic_widget,Make example magic widget,napari_sketchpose._widget:example_magic_widget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-sketchpose.make_func_widget,Make example function widget,napari_sketchpose._widget:example_function_widget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +345,napari-skimage,0.4.0,napari skimage,A plugin to apply scikit-image operations,Guillaume Witz," Copyright (c) 2024, Guillaume Witz, Data Science Lab, University of Bern All rights reserved. @@ -34647,8 +36182,8 @@ SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. -","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.9,"['Bug Tracker, https://github.com/guiwitz/napari-skimage/issues', 'Documentation, https://github.com/guiwitz/napari-skimage#README.md', 'Source Code, https://github.com/guiwitz/napari-skimage', 'User Support, https://github.com/guiwitz/napari-skimage/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Image Processing', 'Segmentation']",napari-skimage.make_prewitt_widget,Make Prewitt filter widget,napari_skimage.skimage_filter_widget:prewitt_filter_widget,napari-skimage.make_laplace_widget,Make Laplace filter widget,napari_skimage.skimage_filter_widget:laplace_filter_widget,napari-skimage.make_gaussian_widget,Make gaussian filter widget,napari_skimage.skimage_filter_widget:gaussian_filter_widget,napari-skimage.make_farid_widget,Farid filter,False,napari-skimage.make_prewitt_widget,Prewitt filter,False,napari-skimage.make_laplace_widget,Laplace filter,False,napari-skimage.make_gaussian_widget,Gaussian filter,False,napari-skimage.make_frangi_widget,Make Frangi filter widget,napari_skimage.skimage_filter_widget:frangi_filter_widget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-skimage.make_median_widget,Make Median filter widget,napari_skimage.skimage_filter_widget:median_filter_widget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-skimage.make_butterworth_widget,Make Butterworth filter widget,napari_skimage.skimage_filter_widget:butterworth_filter_widget,napari-skimage.make_threshold_widget,Make threshold widget,napari_skimage.skimage_threshold_widget:threshold_widget,napari-skimage.make_manual_threshold_widget,Make manual threshold widget,napari_skimage.skimage_threshold_widget:ManualThresholdWidget,napari-skimage.make_binary_morphology_widget,Make binary morphology widget,napari_skimage.skimage_morphology_widget:binary_morphology_widget,napari-skimage.make_morphology_widget,Make morphology widget,napari_skimage.skimage_morphology_widget:morphology_widget,napari-skimage.make_connected_components_widget,Make connected components widget,napari_skimage.skimage_morphology_widget:connected_components_widget,,napari-skimage.make_frangi_widget,Frangi filter,False,napari-skimage.make_median_widget,Median filter,False,napari-skimage.make_butterworth_widget,Butterworth filter,False,napari-skimage.make_threshold_widget,Automated Threshold,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -331,napari-skimage-regionprops,0.10.1,napari-skimage-regionprops,A regionprops table widget plugin for napari,"Marcelo Zoccoler, Robert Haase",BSD-3,https://github.com/haesleinhuepf/napari-skimage-regionprops,61fa6a7039552dcb5983a3ed,['conda'],,https://github.com/haesleinhuepf/napari-skimage-regionprops,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-skimage-regionprops,http://api.anaconda.org/packages/conda-forge/napari-skimage-regionprops,http://anaconda.org/conda-forge/napari-skimage-regionprops,"['0.2.9', '0.3.0', '0.3.1', '0.3.2', '0.4.1', '0.4.2', '0.4.3', '0.4.4', '0.4.5', '0.4.6', '0.5.0', '0.5.2', '0.5.3', '0.5.4', '0.5.5', '0.5.6', '0.5.7', '0.6.0', '0.6.2', '0.7.0', '0.8.0', '0.8.1', '0.9.0', '0.10.1']",0.10.1,0.10.1,['noarch'],26.0,,['pyhd8ed1ab_0'],0.2.9,conda-forge/napari-skimage-regionprops/0.2.9,1.0,0.0,2022-02-02 11:26:37.898000+00:00,2023-06-18 08:40:41.044000+00:00,conda,noarch/napari-skimage-regionprops-0.2.9-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'pandas', 'python >=3.6', 'scikit-image']",noarch,1643801020284.0,None-any-None,pyhd8ed1ab_0,2022-02-02 11:26:38.623000+00:00,983ff451a2e1d3e91628323838624e03,None,14224.0,conda-forge/napari-skimage-regionprops/0.2.9/noarch/napari-skimage-regionprops-0.2.9-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-skimage-regionprops/0.2.9/noarch/napari-skimage-regionprops-0.2.9-pyhd8ed1ab_0.tar.bz2,conda,0.2.9,conda-forge,['main'],public,,0.2.1,napari-skimage-regionprops.napari_experimental_provide_function,duplicate_current_frame,napari_skimage_regionprops._utilities:napari_experimental_provide_function,,,,2.1,napari-skimage-regionprops,0.10.1,,A regionprops table widget plugin for napari,"# napari-skimage-regionprops (nsr) +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.9,"['Bug Tracker, https://github.com/guiwitz/napari-skimage/issues', 'Documentation, https://github.com/guiwitz/napari-skimage#README.md', 'Source Code, https://github.com/guiwitz/napari-skimage', 'User Support, https://github.com/guiwitz/napari-skimage/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Image Processing', 'Segmentation']",napari-skimage.make_prewitt_widget,Make Prewitt filter widget,napari_skimage.skimage_filter_widget:prewitt_filter_widget,napari-skimage.make_laplace_widget,Make Laplace filter widget,napari_skimage.skimage_filter_widget:laplace_filter_widget,napari-skimage.make_gaussian_widget,Make gaussian filter widget,napari_skimage.skimage_filter_widget:gaussian_filter_widget,napari-skimage.make_farid_widget,Farid filter,False,napari-skimage.make_prewitt_widget,Prewitt filter,False,napari-skimage.make_laplace_widget,Laplace filter,False,napari-skimage.make_gaussian_widget,Gaussian filter,False,napari-skimage.make_frangi_widget,Make Frangi filter widget,napari_skimage.skimage_filter_widget:frangi_filter_widget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-skimage.make_median_widget,Make Median filter widget,napari_skimage.skimage_filter_widget:median_filter_widget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-skimage.make_butterworth_widget,Make Butterworth filter widget,napari_skimage.skimage_filter_widget:butterworth_filter_widget,napari-skimage.make_threshold_widget,Make threshold widget,napari_skimage.skimage_threshold_widget:threshold_widget,napari-skimage.make_manual_threshold_widget,Make manual threshold widget,napari_skimage.skimage_threshold_widget:ManualThresholdWidget,napari-skimage.make_binary_morphology_widget,Make binary morphology widget,napari_skimage.skimage_morphology_widget:binary_morphology_widget,napari-skimage.make_morphology_widget,Make morphology widget,napari_skimage.skimage_morphology_widget:morphology_widget,,napari-skimage.make_frangi_widget,Frangi filter,False,napari-skimage.make_median_widget,Median filter,False,napari-skimage.make_butterworth_widget,Butterworth filter,False,napari-skimage.make_threshold_widget,Automated Threshold,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +346,napari-skimage-regionprops,0.10.1,napari-skimage-regionprops,A regionprops table widget plugin for napari,"Marcelo Zoccoler, Robert Haase",BSD-3,https://github.com/haesleinhuepf/napari-skimage-regionprops,61fa6a7039552dcb5983a3ed,['conda'],,https://github.com/haesleinhuepf/napari-skimage-regionprops,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-skimage-regionprops,http://api.anaconda.org/packages/conda-forge/napari-skimage-regionprops,http://anaconda.org/conda-forge/napari-skimage-regionprops,"['0.2.9', '0.3.0', '0.3.1', '0.3.2', '0.4.1', '0.4.2', '0.4.3', '0.4.4', '0.4.5', '0.4.6', '0.5.0', '0.5.2', '0.5.3', '0.5.4', '0.5.5', '0.5.6', '0.5.7', '0.6.0', '0.6.2', '0.7.0', '0.8.0', '0.8.1', '0.9.0', '0.10.1']",0.10.1,0.10.1,['noarch'],26.0,,['pyhd8ed1ab_0'],0.2.9,conda-forge/napari-skimage-regionprops/0.2.9,1.0,0.0,2022-02-02 11:26:37.898000+00:00,2023-06-18 08:40:41.044000+00:00,conda,noarch/napari-skimage-regionprops-0.2.9-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'pandas', 'python >=3.6', 'scikit-image']",noarch,1643801020284.0,None-any-None,pyhd8ed1ab_0,2022-02-02 11:26:38.623000+00:00,983ff451a2e1d3e91628323838624e03,None,14224.0,conda-forge/napari-skimage-regionprops/0.2.9/noarch/napari-skimage-regionprops-0.2.9-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-skimage-regionprops/0.2.9/noarch/napari-skimage-regionprops-0.2.9-pyhd8ed1ab_0.tar.bz2,conda,0.2.9,conda-forge,['main'],public,,0.2.1,napari-skimage-regionprops.napari_experimental_provide_function,duplicate_current_frame,napari_skimage_regionprops._utilities:napari_experimental_provide_function,,,,2.1,napari-skimage-regionprops,0.10.1,,A regionprops table widget plugin for napari,"# napari-skimage-regionprops (nsr) @@ -34988,8 +36523,8 @@ If you encounter any problems, please create a thread on [image.sc] along with a [@haesleinhuepf]: https://twitter.com/haesleinhuepf -",text/markdown,https://github.com/haesleinhuepf/napari-skimage-regionprops,"Marcelo Zoccoler, Robert Haase",robert.haase@tu-dresden.de,BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'scikit-image', 'napari', 'pandas', 'napari-tools-menu (>=0.1.19)', 'napari-workflows', 'imageio (!=2.22.1)', 'Deprecated']",>=3.8,,,True,0.3.0,conda-forge/napari-skimage-regionprops/0.3.0,0.3.1,conda-forge/napari-skimage-regionprops/0.3.1,0.3.2,conda-forge/napari-skimage-regionprops/0.3.2,conda,noarch/napari-skimage-regionprops-0.3.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'pandas', 'python >=3.6', 'scikit-image']",pyhd8ed1ab_0,1645831812407.0,None-any-None,noarch,2022-02-25 23:32:46.693000+00:00,1d047f00e7d551a10c3aa1515c90761a,None,14303.0,conda-forge/napari-skimage-regionprops/0.3.0/noarch/napari-skimage-regionprops-0.3.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-skimage-regionprops/0.3.0/noarch/napari-skimage-regionprops-0.3.0-pyhd8ed1ab_0.tar.bz2,conda,0.3.0,conda-forge,['main'],conda,noarch/napari-skimage-regionprops-0.3.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'pandas', 'python >=3.6', 'scikit-image']",noarch,1647086261041.0,None-any-None,pyhd8ed1ab_0,2022-03-12 11:59:50.133000+00:00,37a913ed9cce34cb0fe2fb78f556ecb4,None,14477.0,conda-forge/napari-skimage-regionprops/0.3.1/noarch/napari-skimage-regionprops-0.3.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-skimage-regionprops/0.3.1/noarch/napari-skimage-regionprops-0.3.1-pyhd8ed1ab_0.tar.bz2,conda,0.3.1,conda-forge,['main'],conda,noarch/napari-skimage-regionprops-0.3.2-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'pandas', 'python >=3.6', 'scikit-image']",BSD-3-Clause,python,1647803889491.0,2022-03-20 19:20:40.167000+00:00,fef387b712f881261500019e17b1f485,None,14647.0,conda-forge/napari-skimage-regionprops/0.3.2/noarch/napari-skimage-regionprops-0.3.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-skimage-regionprops/0.3.2/noarch/napari-skimage-regionprops-0.3.2-pyhd8ed1ab_0.tar.bz2,conda,0.3.2,conda-forge,['main'],,,,,,,,,,,napari-skimage-regionprops.napari_experimental_provide_function,duplicate_current_frame,True,,,,,,,,,,,,,,,,,,,,,,,0.4.1,conda-forge/napari-skimage-regionprops/0.4.1,0.4.2,conda-forge/napari-skimage-regionprops/0.4.2,0.4.3,conda-forge/napari-skimage-regionprops/0.4.3,conda,noarch/napari-skimage-regionprops-0.4.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'pandas', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",noarch,1649400696519.0,None-any-None,pyhd8ed1ab_0,2022-04-08 06:53:48.582000+00:00,31be383ef6142d33e21a02cafbf0b985,None,17074.0,conda-forge/napari-skimage-regionprops/0.4.1/noarch/napari-skimage-regionprops-0.4.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-skimage-regionprops/0.4.1/noarch/napari-skimage-regionprops-0.4.1-pyhd8ed1ab_0.tar.bz2,conda,0.4.1,conda-forge,['main'],conda,noarch/napari-skimage-regionprops-0.4.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'pandas', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",noarch,1650277526318.0,None-any-None,pyhd8ed1ab_0,2022-04-18 10:27:39.805000+00:00,e876f3d981a18d6b98cc604d93cef4d8,None,17582.0,conda-forge/napari-skimage-regionprops/0.4.2/noarch/napari-skimage-regionprops-0.4.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-skimage-regionprops/0.4.2/noarch/napari-skimage-regionprops-0.4.2-pyhd8ed1ab_0.tar.bz2,conda,0.4.2,conda-forge,['main'],conda,noarch/napari-skimage-regionprops-0.4.3-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'pandas', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,python,1650738418539.0,2022-04-23 18:29:10.106000+00:00,23106bf35e108d35be2fa3ef962bf122,None,17687.0,conda-forge/napari-skimage-regionprops/0.4.3/noarch/napari-skimage-regionprops-0.4.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-skimage-regionprops/0.4.3/noarch/napari-skimage-regionprops-0.4.3-pyhd8ed1ab_0.tar.bz2,conda,0.4.3,conda-forge,['main'],,,,,,,0.4.4,conda-forge/napari-skimage-regionprops/0.4.4,0.4.5,conda-forge/napari-skimage-regionprops/0.4.5,conda,noarch/napari-skimage-regionprops-0.4.4-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'pandas', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",noarch,1651059339153.0,None-any-None,pyhd8ed1ab_0,2022-04-27 11:38:29.375000+00:00,6736de54aeed028ae338d7b5c7cc5878,None,17771.0,conda-forge/napari-skimage-regionprops/0.4.4/noarch/napari-skimage-regionprops-0.4.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-skimage-regionprops/0.4.4/noarch/napari-skimage-regionprops-0.4.4-pyhd8ed1ab_0.tar.bz2,conda,0.4.4,conda-forge,['main'],conda,noarch/napari-skimage-regionprops-0.4.5-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'pandas', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,python,1651769490790.0,2022-05-05 16:54:14.358000+00:00,c5b8462e0a86d4bf1470b550c50ddb50,None,17824.0,conda-forge/napari-skimage-regionprops/0.4.5/noarch/napari-skimage-regionprops-0.4.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-skimage-regionprops/0.4.5/noarch/napari-skimage-regionprops-0.4.5-pyhd8ed1ab_0.tar.bz2,conda,0.4.5,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,conda,noarch/napari-skimage-regionprops-0.4.6-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'pandas', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,python,1651956440488.0,2022-05-07 20:49:36.932000+00:00,f08ea39c3f3457b0514e5fc90b741a25,None,18409.0,conda-forge/napari-skimage-regionprops/0.4.6/noarch/napari-skimage-regionprops-0.4.6-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-skimage-regionprops/0.4.6/noarch/napari-skimage-regionprops-0.4.6-pyhd8ed1ab_0.tar.bz2,conda,0.4.6,conda-forge,['main'],0.4.6,conda-forge/napari-skimage-regionprops/0.4.6,conda,noarch/napari-skimage-regionprops-0.5.0-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'pandas', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,1652026719986.0,2022-05-08 16:21:51.125000+00:00,f8d359e0b0464e397728b010b5043d9f,None,18483.0,conda-forge/napari-skimage-regionprops/0.5.0/noarch/napari-skimage-regionprops-0.5.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-skimage-regionprops/0.5.0/noarch/napari-skimage-regionprops-0.5.0-pyhd8ed1ab_0.tar.bz2,conda,0.5.0,conda-forge,['main'],conda,noarch/napari-skimage-regionprops-0.5.2-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'pandas', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,1653805337297.0,2022-05-29 06:25:09.729000+00:00,ce93c65063709c0e9309e564c7f03209,None,18482.0,conda-forge/napari-skimage-regionprops/0.5.2/noarch/napari-skimage-regionprops-0.5.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-skimage-regionprops/0.5.2/noarch/napari-skimage-regionprops-0.5.2-pyhd8ed1ab_0.tar.bz2,conda,0.5.2,conda-forge,['main'],conda,noarch/napari-skimage-regionprops-0.5.3-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'pandas', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,1657479397304.0,2022-07-10 18:58:37.767000+00:00,2f5d90a0bb9f2620559fd96dc22f5062,None,18837.0,conda-forge/napari-skimage-regionprops/0.5.3/noarch/napari-skimage-regionprops-0.5.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-skimage-regionprops/0.5.3/noarch/napari-skimage-regionprops-0.5.3-pyhd8ed1ab_0.tar.bz2,conda,0.5.3,conda-forge,['main'],,, -332,napari-SMLMLAB,0.1.3,BP04 Practical,Napari widget for BP04 Practical.,Piers Turner," +",text/markdown,https://github.com/haesleinhuepf/napari-skimage-regionprops,"Marcelo Zoccoler, Robert Haase",robert.haase@tu-dresden.de,BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'scikit-image', 'napari', 'pandas', 'napari-tools-menu (>=0.1.19)', 'napari-workflows', 'imageio (!=2.22.1)', 'Deprecated']",>=3.8,,,True,0.3.0,conda-forge/napari-skimage-regionprops/0.3.0,0.3.1,conda-forge/napari-skimage-regionprops/0.3.1,0.3.2,conda-forge/napari-skimage-regionprops/0.3.2,conda,noarch/napari-skimage-regionprops-0.3.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'pandas', 'python >=3.6', 'scikit-image']",pyhd8ed1ab_0,1645831812407.0,None-any-None,noarch,2022-02-25 23:32:46.693000+00:00,1d047f00e7d551a10c3aa1515c90761a,None,14303.0,conda-forge/napari-skimage-regionprops/0.3.0/noarch/napari-skimage-regionprops-0.3.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-skimage-regionprops/0.3.0/noarch/napari-skimage-regionprops-0.3.0-pyhd8ed1ab_0.tar.bz2,conda,0.3.0,conda-forge,['main'],conda,noarch/napari-skimage-regionprops-0.3.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'pandas', 'python >=3.6', 'scikit-image']",noarch,1647086261041.0,None-any-None,pyhd8ed1ab_0,2022-03-12 11:59:50.133000+00:00,37a913ed9cce34cb0fe2fb78f556ecb4,None,14477.0,conda-forge/napari-skimage-regionprops/0.3.1/noarch/napari-skimage-regionprops-0.3.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-skimage-regionprops/0.3.1/noarch/napari-skimage-regionprops-0.3.1-pyhd8ed1ab_0.tar.bz2,conda,0.3.1,conda-forge,['main'],conda,noarch/napari-skimage-regionprops-0.3.2-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'pandas', 'python >=3.6', 'scikit-image']",BSD-3-Clause,python,1647803889491.0,2022-03-20 19:20:40.167000+00:00,fef387b712f881261500019e17b1f485,None,14647.0,conda-forge/napari-skimage-regionprops/0.3.2/noarch/napari-skimage-regionprops-0.3.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-skimage-regionprops/0.3.2/noarch/napari-skimage-regionprops-0.3.2-pyhd8ed1ab_0.tar.bz2,conda,0.3.2,conda-forge,['main'],,,,,,,,,,,napari-skimage-regionprops.napari_experimental_provide_function,duplicate_current_frame,True,,,,,,,,,,,,,,,,,,,,,,,0.4.1,conda-forge/napari-skimage-regionprops/0.4.1,0.4.2,conda-forge/napari-skimage-regionprops/0.4.2,0.4.3,conda-forge/napari-skimage-regionprops/0.4.3,conda,noarch/napari-skimage-regionprops-0.4.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'pandas', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",noarch,1649400696519.0,None-any-None,pyhd8ed1ab_0,2022-04-08 06:53:48.582000+00:00,31be383ef6142d33e21a02cafbf0b985,None,17074.0,conda-forge/napari-skimage-regionprops/0.4.1/noarch/napari-skimage-regionprops-0.4.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-skimage-regionprops/0.4.1/noarch/napari-skimage-regionprops-0.4.1-pyhd8ed1ab_0.tar.bz2,conda,0.4.1,conda-forge,['main'],conda,noarch/napari-skimage-regionprops-0.4.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'pandas', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",noarch,1650277526318.0,None-any-None,pyhd8ed1ab_0,2022-04-18 10:27:39.805000+00:00,e876f3d981a18d6b98cc604d93cef4d8,None,17582.0,conda-forge/napari-skimage-regionprops/0.4.2/noarch/napari-skimage-regionprops-0.4.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-skimage-regionprops/0.4.2/noarch/napari-skimage-regionprops-0.4.2-pyhd8ed1ab_0.tar.bz2,conda,0.4.2,conda-forge,['main'],conda,noarch/napari-skimage-regionprops-0.4.3-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'pandas', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,python,1650738418539.0,2022-04-23 18:29:10.106000+00:00,23106bf35e108d35be2fa3ef962bf122,None,17687.0,conda-forge/napari-skimage-regionprops/0.4.3/noarch/napari-skimage-regionprops-0.4.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-skimage-regionprops/0.4.3/noarch/napari-skimage-regionprops-0.4.3-pyhd8ed1ab_0.tar.bz2,conda,0.4.3,conda-forge,['main'],,,,,,,0.4.4,conda-forge/napari-skimage-regionprops/0.4.4,0.4.5,conda-forge/napari-skimage-regionprops/0.4.5,conda,noarch/napari-skimage-regionprops-0.4.4-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'pandas', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",noarch,1651059339153.0,None-any-None,pyhd8ed1ab_0,2022-04-27 11:38:29.375000+00:00,6736de54aeed028ae338d7b5c7cc5878,None,17771.0,conda-forge/napari-skimage-regionprops/0.4.4/noarch/napari-skimage-regionprops-0.4.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-skimage-regionprops/0.4.4/noarch/napari-skimage-regionprops-0.4.4-pyhd8ed1ab_0.tar.bz2,conda,0.4.4,conda-forge,['main'],conda,noarch/napari-skimage-regionprops-0.4.5-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'pandas', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,python,1651769490790.0,2022-05-05 16:54:14.358000+00:00,c5b8462e0a86d4bf1470b550c50ddb50,None,17824.0,conda-forge/napari-skimage-regionprops/0.4.5/noarch/napari-skimage-regionprops-0.4.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-skimage-regionprops/0.4.5/noarch/napari-skimage-regionprops-0.4.5-pyhd8ed1ab_0.tar.bz2,conda,0.4.5,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,conda,noarch/napari-skimage-regionprops-0.4.6-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'pandas', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,python,1651956440488.0,2022-05-07 20:49:36.932000+00:00,f08ea39c3f3457b0514e5fc90b741a25,None,18409.0,conda-forge/napari-skimage-regionprops/0.4.6/noarch/napari-skimage-regionprops-0.4.6-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-skimage-regionprops/0.4.6/noarch/napari-skimage-regionprops-0.4.6-pyhd8ed1ab_0.tar.bz2,conda,0.4.6,conda-forge,['main'],conda,noarch/napari-skimage-regionprops-0.5.0-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'pandas', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,python,1652026719986.0,2022-05-08 16:21:51.125000+00:00,f8d359e0b0464e397728b010b5043d9f,None,18483.0,conda-forge/napari-skimage-regionprops/0.5.0/noarch/napari-skimage-regionprops-0.5.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-skimage-regionprops/0.5.0/noarch/napari-skimage-regionprops-0.5.0-pyhd8ed1ab_0.tar.bz2,conda,0.5.0,conda-forge,['main'],0.4.6,conda-forge/napari-skimage-regionprops/0.4.6,conda,noarch/napari-skimage-regionprops-0.5.2-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'pandas', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,1653805337297.0,2022-05-29 06:25:09.729000+00:00,ce93c65063709c0e9309e564c7f03209,None,18482.0,conda-forge/napari-skimage-regionprops/0.5.2/noarch/napari-skimage-regionprops-0.5.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-skimage-regionprops/0.5.2/noarch/napari-skimage-regionprops-0.5.2-pyhd8ed1ab_0.tar.bz2,conda,0.5.2,conda-forge,['main'],0.5.0,conda-forge/napari-skimage-regionprops/0.5.0,conda,noarch/napari-skimage-regionprops-0.5.3-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'pandas', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,1657479397304.0,2022-07-10 18:58:37.767000+00:00,2f5d90a0bb9f2620559fd96dc22f5062,None,18837.0,conda-forge/napari-skimage-regionprops/0.5.3/noarch/napari-skimage-regionprops-0.5.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-skimage-regionprops/0.5.3/noarch/napari-skimage-regionprops-0.5.3-pyhd8ed1ab_0.tar.bz2,conda,0.5.3,conda-forge,['main'],conda,noarch/napari-skimage-regionprops-0.5.4-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'pandas', 'python >=3.6', 'qtpy', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,2022-09-25 02:30:42.178000+00:00,6efeaa3caee233e6ac52bced36c7e6bc,None,19087.0,conda-forge/napari-skimage-regionprops/0.5.4/noarch/napari-skimage-regionprops-0.5.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-skimage-regionprops/0.5.4/noarch/napari-skimage-regionprops-0.5.4-pyhd8ed1ab_0.tar.bz2,conda,0.5.4,conda-forge,['main'],,, +347,napari-SMLMLAB,0.1.4,BP04 Practical,Napari widget for BP04 Practical.,Piers Turner," Copyright (c) 2024, Piers Turner All rights reserved. @@ -35017,7 +36552,7 @@ SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. -",https://github.com/piedrro/napari-SMLMLAB,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,hidden,,0.2.1,napari-SMLMLAB.make_qwidget,Make example QWidget,smlmlab:QWidget,,,,2.1,napari-SMLMLAB,0.1.3,,Napari widget for BP04 Practical.,"# napari-SMLMLAB +",https://github.com/piedrro/napari-SMLMLAB,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,hidden,,0.2.1,napari-SMLMLAB.make_qwidget,Make example QWidget,smlmlab:QWidget,,,,2.1,napari-SMLMLAB,0.1.4,,Napari widget for BP04 Practical.,"# napari-SMLMLAB [![License BSD-3](https://img.shields.io/pypi/l/napari-SMLMLAB.svg?color=green)](https://github.com/piedrro/napari-SMLMLAB/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-SMLMLAB.svg?color=green)](https://pypi.org/project/napari-SMLMLAB) @@ -35119,8 +36654,8 @@ SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. -","['Framework :: napari', 'Environment :: Plugins', 'License :: OSI Approved :: BSD License', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent']","['napari[all] ==0.5.0', 'numpy', 'magicgui', 'qtpy', 'scipy', 'pyqtgraph', 'picassosr', 'matplotlib', 'tqdm', 'pyqt5-tools', 'trackpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.9,"['Homepage, https://github.com/piedrro/napari-bacseg', 'Bug Tracker, https://github.com/piedrro/napari-bacseg/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",,,,,,,,,,napari-SMLMLAB.make_qwidget,SMLM LAB,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -333,napari-solarized,0.1.1,Napari Solarized,Solarized themes for napari,Ashley Anderson,MIT,https://github.com/aganders3/napari-solarized,6425c5b26fa9a997ef87b6ef,['conda'],,https://github.com/aganders3/napari-solarized,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-solarized,http://api.anaconda.org/packages/conda-forge/napari-solarized,http://anaconda.org/conda-forge/napari-solarized,['0.1.1'],0.1.1,0.1.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.1,conda-forge/napari-solarized/0.1.1,1.0,0.0,2023-03-30 17:23:59.658000+00:00,2023-06-18 17:27:55.982000+00:00,conda,noarch/napari-solarized-0.1.1-pyhd8ed1ab_0.conda,0.0,MIT,False,python,['python >=3.8'],noarch,1680196995038.0,None-any-None,pyhd8ed1ab_0,2023-03-30 17:23:59.993000+00:00,aba399a830cbc5c011b1263fa89fd129,cd97a239bffb7aec2a1b6440c9765eaed3e5f51bb7c8a39beb2a6fd4cc730171,10092.0,conda-forge/napari-solarized/0.1.1/noarch/napari-solarized-0.1.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-solarized/0.1.1/noarch/napari-solarized-0.1.1-pyhd8ed1ab_0.conda,conda,0.1.1,conda-forge,['main'],public,,0.2.1,,,,,,,2.1,napari-solarized,0.1.1,,Solarized themes for napari,"# napari-solarized +","['Framework :: napari', 'Environment :: Plugins', 'License :: OSI Approved :: BSD License', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent']","['napari[all]==0.5.0', 'numpy', 'magicgui', 'qtpy', 'scipy', 'pyqtgraph', 'picassosr==0.7.3', 'matplotlib', 'tqdm', 'pyqt5-tools', 'trackpy', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.9,"['Homepage, https://github.com/piedrro/napari-bacseg', 'Bug Tracker, https://github.com/piedrro/napari-bacseg/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",,,,,,,,,,napari-SMLMLAB.make_qwidget,SMLM LAB,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +348,napari-solarized,0.1.1,Napari Solarized,Solarized themes for napari,Ashley Anderson,MIT,https://github.com/aganders3/napari-solarized,6425c5b26fa9a997ef87b6ef,['conda'],,https://github.com/aganders3/napari-solarized,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-solarized,http://api.anaconda.org/packages/conda-forge/napari-solarized,http://anaconda.org/conda-forge/napari-solarized,['0.1.1'],0.1.1,0.1.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.1,conda-forge/napari-solarized/0.1.1,1.0,0.0,2023-03-30 17:23:59.658000+00:00,2023-06-18 17:27:55.982000+00:00,conda,noarch/napari-solarized-0.1.1-pyhd8ed1ab_0.conda,0.0,MIT,False,python,['python >=3.8'],noarch,1680196995038.0,None-any-None,pyhd8ed1ab_0,2023-03-30 17:23:59.993000+00:00,aba399a830cbc5c011b1263fa89fd129,cd97a239bffb7aec2a1b6440c9765eaed3e5f51bb7c8a39beb2a6fd4cc730171,10092.0,conda-forge/napari-solarized/0.1.1/noarch/napari-solarized-0.1.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-solarized/0.1.1/noarch/napari-solarized-0.1.1-pyhd8ed1ab_0.conda,conda,0.1.1,conda-forge,['main'],public,,0.2.1,,,,,,,2.1,napari-solarized,0.1.1,,Solarized themes for napari,"# napari-solarized Solarized (-ish) themes for napari, based on [solarized](https://ethanschoonover.com/solarized/). @@ -35180,8 +36715,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/aganders3/napari-solarized,Ashley Anderson,aandersoniii@chanzuckerberg.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Mozilla Public License 2.0 (MPL 2.0)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","[""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""npe2 ; extra == 'testing'"", ""typer ; extra == 'testing'"", ""importlib-resources ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/aganders3/napari-solarized/issues', 'Documentation, https://github.com/aganders3/napari-solarized#README.md', 'Source Code, https://github.com/aganders3/napari-solarized', 'User Support, https://github.com/aganders3/napari-solarized/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -334,napari-spacetx-explorer,0.1.8,napari-spacetx-explorer,visualizer for spatial omic data,Sebastian Gonzalez-Tirado,BSD-3,https://github.com/sebgoti/napari-spacetx-explorer,62051044a3c32938bdc839e1,['conda'],,https://github.com/sebgoti/napari-spacetx-explorer,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-spacetx-explorer,http://api.anaconda.org/packages/conda-forge/napari-spacetx-explorer,http://anaconda.org/conda-forge/napari-spacetx-explorer,['0.1.8'],0.1.8,0.1.8,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.8,conda-forge/napari-spacetx-explorer/0.1.8,1.0,0.0,2022-02-10 13:16:50.954000+00:00,2023-06-18 08:40:49.246000+00:00,conda,noarch/napari-spacetx-explorer-0.1.8-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'pandas', 'python >=3.7']",noarch,1644498854052.0,None-any-None,pyhd8ed1ab_0,2022-02-10 13:16:51.230000+00:00,9126744203747ae34ed89579ea7c6bc1,None,11382.0,conda-forge/napari-spacetx-explorer/0.1.8/noarch/napari-spacetx-explorer-0.1.8-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-spacetx-explorer/0.1.8/noarch/napari-spacetx-explorer-0.1.8-pyhd8ed1ab_0.tar.bz2,conda,0.1.8,conda-forge,['main'],public,,0.2.1,napari-spacetx-explorer.napari_experimental_provide_function,read_spots,napari_spacetx_explorer._function:napari_experimental_provide_function,napari-spacetx-explorer.napari_get_reader,['*'],True,2.1,napari-spacetx-explorer,0.1.8,['UNKNOWN'],visualizer for spatial omic data,"# napari-spacetx-explorer +",text/markdown,https://github.com/aganders3/napari-solarized,Ashley Anderson,aandersoniii@chanzuckerberg.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Mozilla Public License 2.0 (MPL 2.0)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","[""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""npe2 ; extra == 'testing'"", ""typer ; extra == 'testing'"", ""importlib-resources ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/aganders3/napari-solarized/issues', 'Documentation, https://github.com/aganders3/napari-solarized#README.md', 'Source Code, https://github.com/aganders3/napari-solarized', 'User Support, https://github.com/aganders3/napari-solarized/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +349,napari-spacetx-explorer,0.1.8,napari-spacetx-explorer,visualizer for spatial omic data,Sebastian Gonzalez-Tirado,BSD-3,https://github.com/sebgoti/napari-spacetx-explorer,62051044a3c32938bdc839e1,['conda'],,https://github.com/sebgoti/napari-spacetx-explorer,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-spacetx-explorer,http://api.anaconda.org/packages/conda-forge/napari-spacetx-explorer,http://anaconda.org/conda-forge/napari-spacetx-explorer,['0.1.8'],0.1.8,0.1.8,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.8,conda-forge/napari-spacetx-explorer/0.1.8,1.0,0.0,2022-02-10 13:16:50.954000+00:00,2023-06-18 08:40:49.246000+00:00,conda,noarch/napari-spacetx-explorer-0.1.8-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'pandas', 'python >=3.7']",noarch,1644498854052.0,None-any-None,pyhd8ed1ab_0,2022-02-10 13:16:51.230000+00:00,9126744203747ae34ed89579ea7c6bc1,None,11382.0,conda-forge/napari-spacetx-explorer/0.1.8/noarch/napari-spacetx-explorer-0.1.8-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-spacetx-explorer/0.1.8/noarch/napari-spacetx-explorer-0.1.8-pyhd8ed1ab_0.tar.bz2,conda,0.1.8,conda-forge,['main'],public,,0.2.1,napari-spacetx-explorer.napari_experimental_provide_function,read_spots,napari_spacetx_explorer._function:napari_experimental_provide_function,napari-spacetx-explorer.napari_get_reader,['*'],True,2.1,napari-spacetx-explorer,0.1.8,['UNKNOWN'],visualizer for spatial omic data,"# napari-spacetx-explorer [![License](https://img.shields.io/pypi/l/napari-spacetx-explorer.svg?color=green)](https://github.com/sebgoti/napari-spacetx-explorer/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-spacetx-explorer.svg?color=green)](https://pypi.org/project/napari-spacetx-explorer) @@ -35267,8 +36802,8 @@ If you encounter any problems or would like some support, please [file an issue] [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/sebgoti/napari-spacetx-explorer,Sebastian Gonzalez-Tirado,sebastian.gonzalez@embl.de,BSD-3,"['Development Status :: 3 - Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari', 'napari-plugin-engine (>=0.1.4)', 'numpy', 'pandas']",>=3.7,"['Bug Tracker, https://github.com/sebgoti/napari-spacetx-explorer/issues', 'Documentation, https://github.com/sebgoti/napari-spacetx-explorer#README.md', 'Source Code, https://github.com/sebgoti/napari-spacetx-explorer', 'User Support, https://github.com/sebgoti/napari-spacetx-explorer/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-spacetx-explorer.napari_experimental_provide_function,read_spots,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -335,napari-spatial-correlation-plotter,0.0.3,Spatial Correlation Plotter,A plugin to compute and display spatial correlation histograms in Napari,Jules Vanaret,MIT,https://github.com/jules-vanaret/napari-spatial-correlation-plotter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-spatial-correlation-plotter.make_widget,Spatial Correlation Plotter,napari_spatial_correlation_plotter:PlotterWidget,,,,2.1,napari-spatial-correlation-plotter,0.0.3,,A plugin to compute and display spatial correlation histograms in Napari,"# :herb: napari-spatial-correlation-plotter +",text/markdown,https://github.com/sebgoti/napari-spacetx-explorer,Sebastian Gonzalez-Tirado,sebastian.gonzalez@embl.de,BSD-3,"['Development Status :: 3 - Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari', 'napari-plugin-engine (>=0.1.4)', 'numpy', 'pandas']",>=3.7,"['Bug Tracker, https://github.com/sebgoti/napari-spacetx-explorer/issues', 'Documentation, https://github.com/sebgoti/napari-spacetx-explorer#README.md', 'Source Code, https://github.com/sebgoti/napari-spacetx-explorer', 'User Support, https://github.com/sebgoti/napari-spacetx-explorer/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-spacetx-explorer.napari_experimental_provide_function,read_spots,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +350,napari-spatial-correlation-plotter,0.0.3,Spatial Correlation Plotter,A plugin to compute and display spatial correlation histograms in Napari,Jules Vanaret,MIT,https://github.com/jules-vanaret/napari-spatial-correlation-plotter,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-spatial-correlation-plotter.make_widget,Spatial Correlation Plotter,napari_spatial_correlation_plotter:PlotterWidget,,,,2.1,napari-spatial-correlation-plotter,0.0.3,,A plugin to compute and display spatial correlation histograms in Napari,"# :herb: napari-spatial-correlation-plotter [![License MIT](https://img.shields.io/pypi/l/napari-spatial-correlation-plotter.svg?color=green)](https://github.com/jules-vanaret/napari-spatial-correlation-plotter/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-spatial-correlation-plotter.svg?color=green)](https://pypi.org/project/napari-spatial-correlation-plotter) @@ -35376,8 +36911,8 @@ This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookie [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/jules-vanaret/napari-spatial-correlation-plotter,Jules Vanaret,jules.vanaret@univ-amu.fr,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'matplotlib', 'scikit-image', 'qtpy', 'pyclesperanto-prototype', 'tapenade', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.8,"['Bug Tracker, https://github.com/jules-vanaret/napari-spatial-correlation-plotter/issues', 'Documentation, https://github.com/jules-vanaret/napari-spatial-correlation-plotter#README.md', 'Source Code, https://github.com/jules-vanaret/napari-spatial-correlation-plotter', 'User Support, https://github.com/jules-vanaret/napari-spatial-correlation-plotter/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",,,,,,,,,,napari-spatial-correlation-plotter.make_widget,Spatial Correlation Plotter,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -336,napari-spatial-omics,0.0.8,napari-spatial-omics,A simple plugin to visualize spatial omic data stored in CSV format,Sebastian Gonzalez-Tirado,BSD-3-Clause,https://github.com/sebgoti/napari-spatial-omics,620936aa414b5ba20e971e42,['conda'],,https://github.com/sebgoti/napari-spatial-omics,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-spatial-omics,http://api.anaconda.org/packages/conda-forge/napari-spatial-omics,http://anaconda.org/conda-forge/napari-spatial-omics,['0.0.8'],0.0.8,0.0.8,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.8,conda-forge/napari-spatial-omics/0.0.8,1.0,0.0,2022-02-13 16:49:43.554000+00:00,2023-06-18 08:40:51.123000+00:00,conda,noarch/napari-spatial-omics-0.0.8-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'pandas', 'python >=3.7']",noarch,1644770822645.0,None-any-None,pyhd8ed1ab_0,2022-02-13 16:49:44.470000+00:00,8c38beee97e8e64afad6029da6238909,None,11791.0,conda-forge/napari-spatial-omics/0.0.8/noarch/napari-spatial-omics-0.0.8-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-spatial-omics/0.0.8/noarch/napari-spatial-omics-0.0.8-pyhd8ed1ab_0.tar.bz2,conda,0.0.8,conda-forge,['main'],public,,0.2.1,napari-spatial-omics.example_magic_widget,example_magic_widget,napari_spatial_omics._dock_widget_original:example_magic_widget,napari-spatial-omics.napari_get_reader,['*'],True,2.1,napari-spatial-omics,0.0.8,['UNKNOWN'],A simple plugin to visualize spatial omic data stored in CSV format,"# napari-spatial-omics +",text/markdown,https://github.com/jules-vanaret/napari-spatial-correlation-plotter,Jules Vanaret,jules.vanaret@univ-amu.fr,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'matplotlib', 'scikit-image', 'qtpy', 'pyclesperanto-prototype', 'tapenade', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.8,"['Bug Tracker, https://github.com/jules-vanaret/napari-spatial-correlation-plotter/issues', 'Documentation, https://github.com/jules-vanaret/napari-spatial-correlation-plotter#README.md', 'Source Code, https://github.com/jules-vanaret/napari-spatial-correlation-plotter', 'User Support, https://github.com/jules-vanaret/napari-spatial-correlation-plotter/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",,,,,,,,,,napari-spatial-correlation-plotter.make_widget,Spatial Correlation Plotter,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +351,napari-spatial-omics,0.0.8,napari-spatial-omics,A simple plugin to visualize spatial omic data stored in CSV format,Sebastian Gonzalez-Tirado,BSD-3-Clause,https://github.com/sebgoti/napari-spatial-omics,620936aa414b5ba20e971e42,['conda'],,https://github.com/sebgoti/napari-spatial-omics,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-spatial-omics,http://api.anaconda.org/packages/conda-forge/napari-spatial-omics,http://anaconda.org/conda-forge/napari-spatial-omics,['0.0.8'],0.0.8,0.0.8,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.8,conda-forge/napari-spatial-omics/0.0.8,1.0,0.0,2022-02-13 16:49:43.554000+00:00,2023-06-18 08:40:51.123000+00:00,conda,noarch/napari-spatial-omics-0.0.8-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'pandas', 'python >=3.7']",noarch,1644770822645.0,None-any-None,pyhd8ed1ab_0,2022-02-13 16:49:44.470000+00:00,8c38beee97e8e64afad6029da6238909,None,11791.0,conda-forge/napari-spatial-omics/0.0.8/noarch/napari-spatial-omics-0.0.8-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-spatial-omics/0.0.8/noarch/napari-spatial-omics-0.0.8-pyhd8ed1ab_0.tar.bz2,conda,0.0.8,conda-forge,['main'],public,,0.2.1,napari-spatial-omics.example_magic_widget,example_magic_widget,napari_spatial_omics._dock_widget_original:example_magic_widget,napari-spatial-omics.napari_get_reader,['*'],True,2.1,napari-spatial-omics,0.0.8,['UNKNOWN'],A simple plugin to visualize spatial omic data stored in CSV format,"# napari-spatial-omics [![License](https://img.shields.io/pypi/l/napari-spatial-omics.svg?color=green)](https://github.com/sebgoti/napari-spatial-omics/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-spatial-omics.svg?color=green)](https://pypi.org/project/napari-spatial-omics) @@ -35446,8 +36981,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/sebgoti/napari-spatial-omics,Sebastian Gonzalez-Tirado,sebgoti8@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'pandas']",>=3.7,"['Bug Tracker, https://github.com/sebgoti/napari-spatial-omics/issues', 'Documentation, https://github.com/sebgoti/napari-spatial-omics#README.md', 'Source Code, https://github.com/sebgoti/napari-spatial-omics', 'User Support, https://github.com/sebgoti/napari-spatial-omics/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-spatial-omics.ExampleQWidget,ExampleQWidget,napari_spatial_omics._dock_widget_original:ExampleQWidget,,,,,,,napari-spatial-omics.example_magic_widget,example_magic_widget,False,napari-spatial-omics.ExampleQWidget,ExampleQWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -337,napari-spatialdata,0.5.3,napari spatialdata,Interactive visualization of spatial omics data with napari,giovanni palla,BSD-3-Clause,https://github.com/scverse/napari-spatialdata.git,62fe658b6c0f2856818ceb72,['conda'],,https://github.com/scverse/napari-spatialdata.git,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-spatialdata,http://api.anaconda.org/packages/conda-forge/napari-spatialdata,http://anaconda.org/conda-forge/napari-spatialdata,"['0.1.0', '0.2.1', '0.2.3', '0.2.4', '0.2.6', '0.3.1', '0.5.0.post1', '0.5.1', '0.5.2.post1', '0.5.3']",0.5.3,0.5.3,['noarch'],29.0,https://github.com/scverse/napari-spatialdata,"['pyh73487a3_0', 'pyh9208f05_0', 'pyhd8ed1ab_0']",0.1.0,conda-forge/napari-spatialdata/0.1.0,1.0,0.0,2022-08-18 16:15:04.287000+00:00,2024-09-27 11:46:00.969000+00:00,conda,noarch/napari-spatialdata-0.1.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['anndata', 'loguru', 'magicgui', 'napari', 'numba', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image', 'squidpy']",noarch,1660839151783.0,None-any-None,pyhd8ed1ab_0,2022-08-18 16:15:04.740000+00:00,2261a260653d4b9e24c3e616b9314570,None,20040.0,conda-forge/napari-spatialdata/0.1.0/noarch/napari-spatialdata-0.1.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-spatialdata/0.1.0/noarch/napari-spatialdata-0.1.0-pyhd8ed1ab_0.tar.bz2,conda,0.1.0,conda-forge,['main'],public,,0.2.1,napari-spatialdata.QtAdataScatterWidget,Visualize spatial omics data in napari,napari_spatialdata._view:QtAdataScatterWidget,napari-spatialdata.get_reader,['*.zarr'],True,2.1,napari-spatialdata,0.5.3,,Interactive visualization of spatial omics data with napari,"![SpatialData banner](https://github.com/scverse/spatialdata/blob/main/docs/_static/img/spatialdata_horizontal.png?raw=true) +",text/markdown,https://github.com/sebgoti/napari-spatial-omics,Sebastian Gonzalez-Tirado,sebgoti8@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'pandas']",>=3.7,"['Bug Tracker, https://github.com/sebgoti/napari-spatial-omics/issues', 'Documentation, https://github.com/sebgoti/napari-spatial-omics#README.md', 'Source Code, https://github.com/sebgoti/napari-spatial-omics', 'User Support, https://github.com/sebgoti/napari-spatial-omics/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-spatial-omics.ExampleQWidget,ExampleQWidget,napari_spatial_omics._dock_widget_original:ExampleQWidget,,,,,,,napari-spatial-omics.example_magic_widget,example_magic_widget,False,napari-spatial-omics.ExampleQWidget,ExampleQWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +352,napari-spatialdata,0.5.4.post0,napari spatialdata,Interactive visualization of spatial omics data with napari,giovanni palla,BSD-3-Clause,https://github.com/scverse/napari-spatialdata.git,62fe658b6c0f2856818ceb72,['conda'],,https://github.com/scverse/napari-spatialdata.git,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-spatialdata,http://api.anaconda.org/packages/conda-forge/napari-spatialdata,http://anaconda.org/conda-forge/napari-spatialdata,"['0.1.0', '0.2.1', '0.2.3', '0.2.4', '0.2.6', '0.3.1', '0.5.0.post1', '0.5.1', '0.5.2.post1', '0.5.3']",0.5.3,0.5.3,['noarch'],29.0,https://github.com/scverse/napari-spatialdata,"['pyh73487a3_0', 'pyh9208f05_0', 'pyhd8ed1ab_0']",0.1.0,conda-forge/napari-spatialdata/0.1.0,1.0,0.0,2022-08-18 16:15:04.287000+00:00,2024-09-27 11:46:00.969000+00:00,conda,noarch/napari-spatialdata-0.1.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['anndata', 'loguru', 'magicgui', 'napari', 'numba', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image', 'squidpy']",noarch,1660839151783.0,None-any-None,pyhd8ed1ab_0,2022-08-18 16:15:04.740000+00:00,2261a260653d4b9e24c3e616b9314570,None,20040.0,conda-forge/napari-spatialdata/0.1.0/noarch/napari-spatialdata-0.1.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-spatialdata/0.1.0/noarch/napari-spatialdata-0.1.0-pyhd8ed1ab_0.tar.bz2,conda,0.1.0,conda-forge,['main'],public,,0.2.1,napari-spatialdata.QtAdataScatterWidget,Visualize spatial omics data in napari,napari_spatialdata._view:QtAdataScatterWidget,napari-spatialdata.get_reader,['*.zarr'],True,2.1,napari-spatialdata,0.5.4.post0,,Interactive visualization of spatial omics data with napari,"![SpatialData banner](https://github.com/scverse/spatialdata/blob/main/docs/_static/img/spatialdata_horizontal.png?raw=true) # napari-spatialdata: interactive exploration and annotation of spatial omics data @@ -35460,7 +36995,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-spatialdata)](https://napari-hub.org/plugins/napari-spatialdata) [![DOI](https://zenodo.org/badge/477021400.svg)](https://zenodo.org/badge/latestdoi/477021400) -This repository contains a napari plugin for interactively exploring and annotating SpatialData objects. `napari-spatialdata` is part of the `SpatialData` ecosystem. To learn more about SpatialData, please see the [documentation](https://spatialdata.scverse.org/). +This repository contains a napari plugin for interactively exploring and annotating SpatialData objects. Here you can find the [napari-spatialdata documentation](https://spatialdata.scverse.org/projects/napari/en/latest/notebooks/spatialdata.html). `napari-spatialdata` is part of the `SpatialData` ecosystem. To learn more about SpatialData, please see the [spatialdata documentation](https://spatialdata.scverse.org/). ## Installation @@ -35530,8 +37065,200 @@ Marconato, L., Palla, G., Yamauchi, K.A. et al. SpatialData: an open and univers [pip]: https://pypi.org/project/pip/ [pypi]: https://pypi.org/ [issue]: https://github.com/scverse/napari-spatialdata/issues -",text/markdown,https://github.com/scverse/napari-spatialdata.git,giovanni palla,giov.pll@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['anndata', 'click', 'cycler', 'dask>=2024.4.1', 'geopandas', 'loguru', 'matplotlib', 'napari>=0.4.19.post1', 'napari-matplotlib', 'numba', 'numpy', 'packaging', 'pandas', 'pillow', 'qtpy', 'scanpy', 'scipy', 'shapely', 'scikit-learn', 'spatialdata>=0.2.1', 'superqt', 'typing-extensions>=4.8.0', 'vispy', 'xarray', 'xarray-datatree', 'napari[pyqt5]; extra == ""all""', 'sphinx>=4.5; extra == ""doc""', 'sphinx-book-theme>=1.0.0; extra == ""doc""', 'myst-parser; extra == ""doc""', 'sphinxcontrib-bibtex>=1.0.0; extra == ""doc""', 'sphinx-autodoc-typehints>=1.11.0; extra == ""doc""', 'sphinx-autobuild; extra == ""doc""', 'scanpydoc; extra == ""doc""', 'ipykernel; extra == ""doc""', 'ipython; extra == ""doc""', 'sphinx-copybutton; extra == ""doc""', 'sphinx-qt-documentation; extra == ""doc""', 'myst-nb; extra == ""doc""', 'squidpy; extra == ""doc""', 'spatialdata>=0.1.0-pre0; extra == ""pre""', 'pydantic<2; extra == ""readthedocs""', 'loguru; extra == ""test""', 'pytest; extra == ""test""', 'pytest-cov; extra == ""test""', 'pytest-qt; extra == ""test""', 'pre-commit>=2.9.0; extra == ""test""']",>=3.9.2,"['Bug Tracker, https://github.com/scverse/napari-spatialdata/issues', 'Documentation, https://spatialdata.scverse.org/projects/napari/en/latest/notebooks/spatialdata.html', 'Source Code, https://github.com/scverse/napari-spatialdata', 'User Support, https://github.com/scverse/napari-spatialdata/issues']","['all', 'doc', 'pre', 'readthedocs', 'test']",False,0.2.1,conda-forge/napari-spatialdata/0.2.1,0.2.3,conda-forge/napari-spatialdata/0.2.3,0.2.4,conda-forge/napari-spatialdata/0.2.4,conda,noarch/napari-spatialdata-0.2.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['anndata', 'cycler', 'dask-core', 'geopandas', 'loguru', 'matplotlib-base', 'napari', 'napari-matplotlib', 'numba', 'numpy', 'packaging', 'pandas', 'python >=3.9', 'qtpy', 'scikit-learn', 'scipy', 'spatialdata', 'superqt', 'vispy']",pyhd8ed1ab_0,1700681204815.0,None-any-None,noarch,2023-11-22 19:29:36.868000+00:00,466e3aeb4cd1333cfe6842e91b4846be,b26abbc6df710176384b4159938979851cd9e8a6bc87492eee592fbd4e104c64,31296.0,conda-forge/napari-spatialdata/0.2.1/noarch/napari-spatialdata-0.2.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-spatialdata/0.2.1/noarch/napari-spatialdata-0.2.1-pyhd8ed1ab_0.conda,conda,0.2.1,conda-forge,['main'],conda,noarch/napari-spatialdata-0.2.3-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['anndata', 'cycler', 'dask-core', 'geopandas', 'loguru', 'matplotlib-base', 'napari', 'napari-matplotlib', 'numba', 'numpy', 'packaging', 'pandas', 'python >=3.9', 'qtpy', 'scikit-learn', 'scipy', 'shapely', 'spatialdata', 'superqt', 'vispy']",noarch,1700697434443.0,None-any-None,pyhd8ed1ab_0,2023-11-23 00:00:40.045000+00:00,4197bfe08e7ca4c8b9f9588f927874d3,cecc4c73162844030f75a9d22d3de28eb7de1e74e4ada7bbad632d370b1e27f9,31675.0,conda-forge/napari-spatialdata/0.2.3/noarch/napari-spatialdata-0.2.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-spatialdata/0.2.3/noarch/napari-spatialdata-0.2.3-pyhd8ed1ab_0.conda,conda,0.2.3,conda-forge,['main'],conda,noarch/napari-spatialdata-0.2.4-pyhd8ed1ab_0.conda,None-any-None,True,noarch,pyhd8ed1ab_0,0.0,"['anndata', 'cycler', 'dask-core', 'geopandas', 'loguru', 'matplotlib-base', 'napari', 'napari-matplotlib', 'numba', 'numpy', 'packaging', 'pandas', 'python >=3.9', 'qtpy', 'scikit-learn', 'scipy', 'shapely', 'spatialdata', 'superqt', 'typing-extensions <=4.5', 'vispy']",BSD-3-Clause,python,1700758472109.0,2023-11-23 16:57:14.853000+00:00,bf6e8b9e945690ef616cc022b7de4393,ed7fbe8f6176174e0d5ed2bad6fc819918e1c97ce3345349527af939ce8b826e,34301.0,conda-forge/napari-spatialdata/0.2.4/noarch/napari-spatialdata-0.2.4-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-spatialdata/0.2.4/noarch/napari-spatialdata-0.2.4-pyhd8ed1ab_0.conda,conda,0.2.4,conda-forge,['main'],,napari-spatialdata.QtAdataViewWidget,Visualize spatial omics data in napari,napari_spatialdata._view:QtAdataViewWidget,napari-spatialdata.QtAdataAnnotationWidget,Annotation in napari,napari_spatialdata._view:QtAdataAnnotationWidget,napari-spatialdata.get_reader,Get napari Reader for spatialdata,napari_spatialdata:get_reader,napari-spatialdata.QtAdataScatterWidget,Scatter,False,napari-spatialdata.QtAdataViewWidget,View,False,napari-spatialdata.QtAdataAnnotationWidget,Annotation,False,,,,,,,,,,,,,,,,,0.2.6,conda-forge/napari-spatialdata/0.2.6,0.3.1,conda-forge/napari-spatialdata/0.3.1,0.5.0.post1,conda-forge/napari-spatialdata/0.5.0.post1,conda,noarch/napari-spatialdata-0.2.6-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,True,python,"['anndata', 'click', 'cycler', 'dask-core', 'geopandas', 'loguru', 'matplotlib-base', 'napari', 'napari-matplotlib', 'napari-plugin-engine', 'numba', 'numpy', 'packaging', 'pandas', 'python >=3.9', 'qtpy', 'scikit-learn', 'scipy', 'shapely', 'spatialdata', 'superqt', 'typing-extensions <=4.5', 'vispy', 'xarray-datatree']",noarch,1700762444150.0,None-any-None,pyhd8ed1ab_0,2023-11-23 18:04:38.503000+00:00,b15ae4be4aadce06d27786f88c69fd74,41ce02e90e4b2202c2ad7343faf90f23ed01a14aae45530b57a12cc43914c599,37016.0,conda-forge/napari-spatialdata/0.2.6/noarch/napari-spatialdata-0.2.6-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-spatialdata/0.2.6/noarch/napari-spatialdata-0.2.6-pyhd8ed1ab_0.conda,conda,0.2.6,conda-forge,['main'],conda,noarch/napari-spatialdata-0.3.1-pyh9208f05_0.conda,0.0,BSD-3-Clause,True,python,"['anndata', 'click', 'cycler', 'dask-core', 'geopandas', 'loguru', 'matplotlib-base', 'napari', 'napari-matplotlib', 'numba', 'numpy', 'packaging', 'pandas', 'pillow', 'python >=3.9', 'qtpy', 'scikit-learn', 'scipy', 'shapely', 'spatialdata >=0.0.15', 'superqt', 'typing-extensions >=4.8.0', 'vispy', 'xarray']",noarch,1700763136654.0,None-any-None,pyh9208f05_0,2023-11-23 18:16:19.208000+00:00,39d5dd50811b5486bc10a832c24065d0,17828dc90548078d171807864525e004ac3f4034025f233d2257ac532d3febae,40905.0,conda-forge/napari-spatialdata/0.3.1/noarch/napari-spatialdata-0.3.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-spatialdata/0.3.1/noarch/napari-spatialdata-0.3.1-pyh9208f05_0.conda,conda,0.3.1,conda-forge,['main'],conda,noarch/napari-spatialdata-0.5.0.post1-pyh9208f05_0.conda,None-any-None,True,noarch,pyh9208f05_0,0.0,"['anndata >=0.9.1', 'click', 'cycler', 'dask-core >=2024.4.1', 'geopandas', 'loguru', 'matplotlib-base', 'napari >=0.4.19.post1', 'napari-matplotlib', 'numba', 'numpy', 'packaging', 'pandas', 'pillow', 'python >=3.9', 'qtpy', 'scanpy', 'scikit-learn', 'scipy', 'shapely', 'spatialdata >=0.2.1', 'superqt', 'typing-extensions >=4.8.0', 'vispy', 'xarray-datatree']",BSD-3-Clause,python,1720811795491.0,2024-07-12 19:20:56.058000+00:00,4ac2afdb9f650aea295d50dfa50de5f4,7ce3db38ed94cdee4287f722dfa679f41cdc5c24fc29057baa6bf085c52039fe,83500.0,conda-forge/napari-spatialdata/0.5.0.post1/noarch/napari-spatialdata-0.5.0.post1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-spatialdata/0.5.0.post1/noarch/napari-spatialdata-0.5.0.post1-pyh9208f05_0.conda,conda,0.5.0.post1,conda-forge,['main'],,,,,,,0.5.1,conda-forge/napari-spatialdata/0.5.1,0.5.2.post1,conda-forge/napari-spatialdata/0.5.2.post1,conda,noarch/napari-spatialdata-0.5.1-pyh9208f05_0.conda,0.0,BSD-3-Clause,True,python,"['anndata >=0.9.1', 'click', 'cycler', 'dask-core >=2024.4.1', 'geopandas', 'loguru', 'matplotlib-base', 'napari >=0.4.19.post1', 'napari-matplotlib', 'numba', 'numpy', 'packaging', 'pandas', 'pillow', 'python >=3.9', 'qtpy', 'scanpy', 'scikit-learn', 'scipy', 'shapely', 'spatialdata >=0.2.1', 'superqt', 'typing-extensions >=4.8.0', 'vispy', 'xarray', 'xarray-datatree']",noarch,1723545851319.0,None-any-None,pyh9208f05_0,2024-08-13 10:47:35.425000+00:00,db92457f2f2805d1800d6e493d29e26d,54a02ce91485eb56d7402d6bfc71666c8d8fbb6dc6a575e290f9b1a5ff775723,83546.0,conda-forge/napari-spatialdata/0.5.1/noarch/napari-spatialdata-0.5.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-spatialdata/0.5.1/noarch/napari-spatialdata-0.5.1-pyh9208f05_0.conda,conda,0.5.1,conda-forge,['main'],conda,noarch/napari-spatialdata-0.5.2.post1-pyh9208f05_0.conda,None-any-None,True,noarch,pyh9208f05_0,0.0,"['anndata >=0.9.1', 'click', 'cycler', 'dask-core >=2024.4.1', 'geopandas', 'loguru', 'matplotlib-base', 'napari >=0.4.19.post1', 'napari-matplotlib', 'numba', 'numpy', 'packaging', 'pandas', 'pillow', 'python >=3.9', 'qtpy', 'scanpy', 'scikit-learn', 'scipy', 'shapely', 'spatialdata >=0.2.1', 'superqt', 'typing-extensions >=4.8.0', 'vispy', 'xarray', 'xarray-datatree']",BSD-3-Clause,python,1724060633220.0,2024-08-19 09:46:24.578000+00:00,ee10657e65e980de85c19e5c92d2b44d,3247bafdbe02e7256b6a121d2696bf9301221867b2790107ef5575192faa3994,83590.0,conda-forge/napari-spatialdata/0.5.2.post1/noarch/napari-spatialdata-0.5.2.post1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-spatialdata/0.5.2.post1/noarch/napari-spatialdata-0.5.2.post1-pyh9208f05_0.conda,conda,0.5.2.post1,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,conda,noarch/napari-spatialdata-0.5.3-pyh73487a3_0.conda,None-any-None,True,noarch,pyh73487a3_0,0.0,"['anndata >=0.9.1', 'click', 'cycler', 'dask-core >=2024.4.1', 'geopandas', 'loguru', 'matplotlib-base', 'napari >=0.4.19.post1', 'napari-matplotlib', 'numba', 'numpy', 'packaging', 'pandas', 'pillow', 'python >=3.9.2', 'qtpy', 'scanpy', 'scikit-learn', 'scipy', 'shapely', 'spatialdata >=0.2.1', 'superqt', 'typing-extensions >=4.8.0', 'vispy', 'xarray', 'xarray-datatree']",BSD-3-Clause,python,1727437367196.0,2024-09-27 11:45:58.427000+00:00,90aa6ab4e6decb44fe22d6062484a059,74fb1df2fae0d79d3690e296c147513e4e87cc919d8d89da3a2bd1373b5486e3,84052.0,conda-forge/napari-spatialdata/0.5.3/noarch/napari-spatialdata-0.5.3-pyh73487a3_0.conda,//api.anaconda.org/download/conda-forge/napari-spatialdata/0.5.3/noarch/napari-spatialdata-0.5.3-pyh73487a3_0.conda,conda,0.5.3,conda-forge,['main'],0.5.3,conda-forge/napari-spatialdata/0.5.3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -338,napari-splinedist,0.3.1,SplineDist,A napari SplineDist plugin,Dr. Thorsten Beier,MIT,https://github.com/DerThorsten/napari-splinedist,65593ed87a5c2441efda4036,['conda'],,https://pypi.org/project/napari-splinedist,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-splinedist,http://api.anaconda.org/packages/conda-forge/napari-splinedist,http://anaconda.org/conda-forge/napari-splinedist,['0.3.1'],0.3.1,0.3.1,['noarch'],3.0,https://github.com/DerThorsten/napari-splinedist,['pyh9208f05_0'],0.3.1,conda-forge/napari-splinedist/0.3.1,1.0,0.0,2023-11-18 22:46:45.578000+00:00,2023-11-18 22:46:48.445000+00:00,conda,noarch/napari-splinedist-0.3.1-pyh9208f05_0.conda,0.0,MIT,False,python,"['magicgui', 'napari', 'napari-splineit >=0.3.0', 'numpy', 'opencv', 'pydantic', 'python >=3.8', 'qtpy', 'requests', 'splinedist >=0.1.2', 'stardist >=0.8.3', 'tensorflow']",noarch,1700347425931.0,None-any-None,pyh9208f05_0,2023-11-18 22:46:45.988000+00:00,b7a39b42040636a803ff283f16b7b5bb,c8d5c659ecf6b0ada149b470d316035fc645e1ca0758b653c56b807af73a77d1,292587.0,conda-forge/napari-splinedist/0.3.1/noarch/napari-splinedist-0.3.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-splinedist/0.3.1/noarch/napari-splinedist-0.3.1-pyh9208f05_0.conda,conda,0.3.1,conda-forge,['main'],public,,0.2.1,napari-splinedist.sample_data_bbbc038,Load sample data from SplineDist,napari_splinedist._sample_data:sample_data_bbbc038,,,,2.1,napari-splinedist,0.3.1,,A napari SplineDist plugin,"# napari-splinedist +",text/markdown,https://github.com/scverse/napari-spatialdata.git,giovanni palla,giov.pll@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['anndata', 'click', 'cycler', 'dask>=2024.4.1', 'geopandas', 'loguru', 'matplotlib', 'napari>=0.4.19.post1', 'napari-matplotlib', 'numba', 'numpy', 'packaging', 'pandas', 'pillow', 'qtpy', 'scanpy', 'scipy', 'shapely', 'scikit-learn', 'spatialdata>=0.2.6', 'superqt', 'typing_extensions>=4.8.0', 'vispy', 'xarray', 'xarray-datatree', 'loguru; extra == ""test""', 'pytest; extra == ""test""', 'pytest-cov; extra == ""test""', 'pytest-qt; extra == ""test""', 'pre-commit>=2.9.0; extra == ""test""', 'sphinx>=4.5; extra == ""doc""', 'sphinx-book-theme>=1.0.0; extra == ""doc""', 'myst-parser; extra == ""doc""', 'sphinxcontrib-bibtex>=1.0.0; extra == ""doc""', 'sphinx-autodoc-typehints>=1.11.0; extra == ""doc""', 'sphinx-autobuild; extra == ""doc""', 'scanpydoc; extra == ""doc""', 'ipykernel; extra == ""doc""', 'ipython; extra == ""doc""', 'sphinx-copybutton; extra == ""doc""', 'sphinx-qt-documentation; extra == ""doc""', 'myst-nb; extra == ""doc""', 'squidpy; extra == ""doc""', 'pydantic<2; extra == ""readthedocs""', 'spatialdata>=0.1.0-pre0; extra == ""pre""', 'napari[pyqt5]; extra == ""all""']",>=3.10,"['Bug Tracker, https://github.com/scverse/napari-spatialdata/issues', 'Documentation, https://spatialdata.scverse.org/projects/napari/en/latest/notebooks/spatialdata.html', 'Source Code, https://github.com/scverse/napari-spatialdata', 'User Support, https://github.com/scverse/napari-spatialdata/issues']","['test', 'doc', 'readthedocs', 'pre', 'all']",False,0.2.1,conda-forge/napari-spatialdata/0.2.1,0.2.3,conda-forge/napari-spatialdata/0.2.3,0.2.4,conda-forge/napari-spatialdata/0.2.4,conda,noarch/napari-spatialdata-0.2.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['anndata', 'cycler', 'dask-core', 'geopandas', 'loguru', 'matplotlib-base', 'napari', 'napari-matplotlib', 'numba', 'numpy', 'packaging', 'pandas', 'python >=3.9', 'qtpy', 'scikit-learn', 'scipy', 'spatialdata', 'superqt', 'vispy']",pyhd8ed1ab_0,1700681204815.0,None-any-None,noarch,2023-11-22 19:29:36.868000+00:00,466e3aeb4cd1333cfe6842e91b4846be,b26abbc6df710176384b4159938979851cd9e8a6bc87492eee592fbd4e104c64,31296.0,conda-forge/napari-spatialdata/0.2.1/noarch/napari-spatialdata-0.2.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-spatialdata/0.2.1/noarch/napari-spatialdata-0.2.1-pyhd8ed1ab_0.conda,conda,0.2.1,conda-forge,['main'],conda,noarch/napari-spatialdata-0.2.3-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['anndata', 'cycler', 'dask-core', 'geopandas', 'loguru', 'matplotlib-base', 'napari', 'napari-matplotlib', 'numba', 'numpy', 'packaging', 'pandas', 'python >=3.9', 'qtpy', 'scikit-learn', 'scipy', 'shapely', 'spatialdata', 'superqt', 'vispy']",noarch,1700697434443.0,None-any-None,pyhd8ed1ab_0,2023-11-23 00:00:40.045000+00:00,4197bfe08e7ca4c8b9f9588f927874d3,cecc4c73162844030f75a9d22d3de28eb7de1e74e4ada7bbad632d370b1e27f9,31675.0,conda-forge/napari-spatialdata/0.2.3/noarch/napari-spatialdata-0.2.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-spatialdata/0.2.3/noarch/napari-spatialdata-0.2.3-pyhd8ed1ab_0.conda,conda,0.2.3,conda-forge,['main'],conda,noarch/napari-spatialdata-0.2.4-pyhd8ed1ab_0.conda,None-any-None,True,noarch,pyhd8ed1ab_0,0.0,"['anndata', 'cycler', 'dask-core', 'geopandas', 'loguru', 'matplotlib-base', 'napari', 'napari-matplotlib', 'numba', 'numpy', 'packaging', 'pandas', 'python >=3.9', 'qtpy', 'scikit-learn', 'scipy', 'shapely', 'spatialdata', 'superqt', 'typing-extensions <=4.5', 'vispy']",BSD-3-Clause,python,1700758472109.0,2023-11-23 16:57:14.853000+00:00,bf6e8b9e945690ef616cc022b7de4393,ed7fbe8f6176174e0d5ed2bad6fc819918e1c97ce3345349527af939ce8b826e,34301.0,conda-forge/napari-spatialdata/0.2.4/noarch/napari-spatialdata-0.2.4-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-spatialdata/0.2.4/noarch/napari-spatialdata-0.2.4-pyhd8ed1ab_0.conda,conda,0.2.4,conda-forge,['main'],,napari-spatialdata.QtAdataViewWidget,Visualize spatial omics data in napari,napari_spatialdata._view:QtAdataViewWidget,napari-spatialdata.QtAdataAnnotationWidget,Annotation in napari,napari_spatialdata._view:QtAdataAnnotationWidget,napari-spatialdata.get_reader,Get napari Reader for spatialdata,napari_spatialdata:get_reader,napari-spatialdata.QtAdataScatterWidget,Scatter,False,napari-spatialdata.QtAdataViewWidget,View,False,napari-spatialdata.QtAdataAnnotationWidget,Annotation,False,,,,,,,,,,,,,,,,,0.2.6,conda-forge/napari-spatialdata/0.2.6,0.3.1,conda-forge/napari-spatialdata/0.3.1,0.5.0.post1,conda-forge/napari-spatialdata/0.5.0.post1,conda,noarch/napari-spatialdata-0.2.6-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,True,python,"['anndata', 'click', 'cycler', 'dask-core', 'geopandas', 'loguru', 'matplotlib-base', 'napari', 'napari-matplotlib', 'napari-plugin-engine', 'numba', 'numpy', 'packaging', 'pandas', 'python >=3.9', 'qtpy', 'scikit-learn', 'scipy', 'shapely', 'spatialdata', 'superqt', 'typing-extensions <=4.5', 'vispy', 'xarray-datatree']",noarch,1700762444150.0,None-any-None,pyhd8ed1ab_0,2023-11-23 18:04:38.503000+00:00,b15ae4be4aadce06d27786f88c69fd74,41ce02e90e4b2202c2ad7343faf90f23ed01a14aae45530b57a12cc43914c599,37016.0,conda-forge/napari-spatialdata/0.2.6/noarch/napari-spatialdata-0.2.6-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-spatialdata/0.2.6/noarch/napari-spatialdata-0.2.6-pyhd8ed1ab_0.conda,conda,0.2.6,conda-forge,['main'],conda,noarch/napari-spatialdata-0.3.1-pyh9208f05_0.conda,0.0,BSD-3-Clause,True,python,"['anndata', 'click', 'cycler', 'dask-core', 'geopandas', 'loguru', 'matplotlib-base', 'napari', 'napari-matplotlib', 'numba', 'numpy', 'packaging', 'pandas', 'pillow', 'python >=3.9', 'qtpy', 'scikit-learn', 'scipy', 'shapely', 'spatialdata >=0.0.15', 'superqt', 'typing-extensions >=4.8.0', 'vispy', 'xarray']",noarch,1700763136654.0,None-any-None,pyh9208f05_0,2023-11-23 18:16:19.208000+00:00,39d5dd50811b5486bc10a832c24065d0,17828dc90548078d171807864525e004ac3f4034025f233d2257ac532d3febae,40905.0,conda-forge/napari-spatialdata/0.3.1/noarch/napari-spatialdata-0.3.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-spatialdata/0.3.1/noarch/napari-spatialdata-0.3.1-pyh9208f05_0.conda,conda,0.3.1,conda-forge,['main'],conda,noarch/napari-spatialdata-0.5.0.post1-pyh9208f05_0.conda,None-any-None,True,noarch,pyh9208f05_0,0.0,"['anndata >=0.9.1', 'click', 'cycler', 'dask-core >=2024.4.1', 'geopandas', 'loguru', 'matplotlib-base', 'napari >=0.4.19.post1', 'napari-matplotlib', 'numba', 'numpy', 'packaging', 'pandas', 'pillow', 'python >=3.9', 'qtpy', 'scanpy', 'scikit-learn', 'scipy', 'shapely', 'spatialdata >=0.2.1', 'superqt', 'typing-extensions >=4.8.0', 'vispy', 'xarray-datatree']",BSD-3-Clause,python,1720811795491.0,2024-07-12 19:20:56.058000+00:00,4ac2afdb9f650aea295d50dfa50de5f4,7ce3db38ed94cdee4287f722dfa679f41cdc5c24fc29057baa6bf085c52039fe,83500.0,conda-forge/napari-spatialdata/0.5.0.post1/noarch/napari-spatialdata-0.5.0.post1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-spatialdata/0.5.0.post1/noarch/napari-spatialdata-0.5.0.post1-pyh9208f05_0.conda,conda,0.5.0.post1,conda-forge,['main'],,,,,,,0.5.1,conda-forge/napari-spatialdata/0.5.1,0.5.2.post1,conda-forge/napari-spatialdata/0.5.2.post1,conda,noarch/napari-spatialdata-0.5.1-pyh9208f05_0.conda,0.0,BSD-3-Clause,True,python,"['anndata >=0.9.1', 'click', 'cycler', 'dask-core >=2024.4.1', 'geopandas', 'loguru', 'matplotlib-base', 'napari >=0.4.19.post1', 'napari-matplotlib', 'numba', 'numpy', 'packaging', 'pandas', 'pillow', 'python >=3.9', 'qtpy', 'scanpy', 'scikit-learn', 'scipy', 'shapely', 'spatialdata >=0.2.1', 'superqt', 'typing-extensions >=4.8.0', 'vispy', 'xarray', 'xarray-datatree']",noarch,1723545851319.0,None-any-None,pyh9208f05_0,2024-08-13 10:47:35.425000+00:00,db92457f2f2805d1800d6e493d29e26d,54a02ce91485eb56d7402d6bfc71666c8d8fbb6dc6a575e290f9b1a5ff775723,83546.0,conda-forge/napari-spatialdata/0.5.1/noarch/napari-spatialdata-0.5.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-spatialdata/0.5.1/noarch/napari-spatialdata-0.5.1-pyh9208f05_0.conda,conda,0.5.1,conda-forge,['main'],conda,noarch/napari-spatialdata-0.5.2.post1-pyh9208f05_0.conda,None-any-None,True,noarch,pyh9208f05_0,0.0,"['anndata >=0.9.1', 'click', 'cycler', 'dask-core >=2024.4.1', 'geopandas', 'loguru', 'matplotlib-base', 'napari >=0.4.19.post1', 'napari-matplotlib', 'numba', 'numpy', 'packaging', 'pandas', 'pillow', 'python >=3.9', 'qtpy', 'scanpy', 'scikit-learn', 'scipy', 'shapely', 'spatialdata >=0.2.1', 'superqt', 'typing-extensions >=4.8.0', 'vispy', 'xarray', 'xarray-datatree']",BSD-3-Clause,python,1724060633220.0,2024-08-19 09:46:24.578000+00:00,ee10657e65e980de85c19e5c92d2b44d,3247bafdbe02e7256b6a121d2696bf9301221867b2790107ef5575192faa3994,83590.0,conda-forge/napari-spatialdata/0.5.2.post1/noarch/napari-spatialdata-0.5.2.post1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-spatialdata/0.5.2.post1/noarch/napari-spatialdata-0.5.2.post1-pyh9208f05_0.conda,conda,0.5.2.post1,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,conda,noarch/napari-spatialdata-0.5.3-pyh73487a3_0.conda,None-any-None,True,noarch,pyh73487a3_0,0.0,"['anndata >=0.9.1', 'click', 'cycler', 'dask-core >=2024.4.1', 'geopandas', 'loguru', 'matplotlib-base', 'napari >=0.4.19.post1', 'napari-matplotlib', 'numba', 'numpy', 'packaging', 'pandas', 'pillow', 'python >=3.9.2', 'qtpy', 'scanpy', 'scikit-learn', 'scipy', 'shapely', 'spatialdata >=0.2.1', 'superqt', 'typing-extensions >=4.8.0', 'vispy', 'xarray', 'xarray-datatree']",BSD-3-Clause,python,1727437367196.0,2024-09-27 11:45:58.427000+00:00,90aa6ab4e6decb44fe22d6062484a059,74fb1df2fae0d79d3690e296c147513e4e87cc919d8d89da3a2bd1373b5486e3,84052.0,conda-forge/napari-spatialdata/0.5.3/noarch/napari-spatialdata-0.5.3-pyh73487a3_0.conda,//api.anaconda.org/download/conda-forge/napari-spatialdata/0.5.3/noarch/napari-spatialdata-0.5.3-pyh73487a3_0.conda,conda,0.5.3,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,0.5.3,conda-forge/napari-spatialdata/0.5.3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +353,napari-spfluo,0.1.0,single particle,A plugin to use spfluo within napari,,MIT,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,hidden,,0.2.1,napari-spfluo.make_generated_anisotropic,Load sample data from single particle,napari_spfluo._sample_data:make_generated_anisotropic,,,,2.3,napari-spfluo,0.1.0,,A plugin to use spfluo within napari,"# napari-spfluo + +[![License MIT](https://img.shields.io/pypi/l/napari-spfluo.svg?color=green)](https://github.com/jplumail/napari-spfluo/raw/main/LICENSE) +[![PyPI](https://img.shields.io/pypi/v/napari-spfluo.svg?color=green)](https://pypi.org/project/napari-spfluo) +[![Python Version](https://img.shields.io/pypi/pyversions/napari-spfluo.svg?color=green)](https://python.org) +[![tests](https://github.com/jplumail/napari-spfluo/workflows/tests/badge.svg)](https://github.com/jplumail/napari-spfluo/actions) +[![codecov](https://codecov.io/gh/jplumail/napari-spfluo/branch/main/graph/badge.svg)](https://codecov.io/gh/jplumail/napari-spfluo) +[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-spfluo)](https://napari-hub.org/plugins/napari-spfluo) + +A plugin to use spfluo within napari + +---------------------------------- + +This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template. + + + +## Installation + +You can install `napari-spfluo` via [pip]: + + pip install napari-spfluo + + + +To install latest development version : + + pip install git+https://github.com/jplumail/napari-spfluo.git + + +## Contributing + +Contributions are very welcome. Tests can be run with [tox], please ensure +the coverage at least stays the same before you submit a pull request. + +## License + +Distributed under the terms of the [MIT] license, +""napari-spfluo"" is free and open source software + +## Issues + +If you encounter any problems, please [file an issue] along with a detailed description. + +[napari]: https://github.com/napari/napari +[Cookiecutter]: https://github.com/audreyr/cookiecutter +[@napari]: https://github.com/napari +[MIT]: http://opensource.org/licenses/MIT +[BSD-3]: http://opensource.org/licenses/BSD-3-Clause +[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt +[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt +[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0 +[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt +[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin + +[file an issue]: https://github.com/jplumail/napari-spfluo/issues + +[napari]: https://github.com/napari/napari +[tox]: https://tox.readthedocs.io/en/latest/ +[pip]: https://pypi.org/project/pip/ +[PyPI]: https://pypi.org/ +",text/markdown,,,Jean Plumail ,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']","['magicgui', 'numpy', 'qtpy', 'scikit-image', 'spfluo[ab-initio-reconstruction]']",>=3.8,"['Bug Tracker, https://github.com/jplumail/napari-spfluo/issues', 'Documentation, https://github.com/jplumail/napari-spfluo#README.md', 'Homepage, https://github.com/jplumail/napari-spfluo', 'Source Code, https://github.com/jplumail/napari-spfluo', 'User Support, https://github.com/jplumail/napari-spfluo/issues']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",napari-spfluo.make_ab_initio_widget,Make ab initio Container widget,napari_spfluo:AbInitioWidget,napari-spfluo.make_manual_ab_initio_widget,Make manual ab initio Container widget,napari_spfluo:ManualAbInitioWidget,napari-spfluo.make_symmetrize_widget,Make symmetrize widget,napari_spfluo:SymmetrizeWidget,napari-spfluo.make_ab_initio_widget,Ab initio reconstruction,False,napari-spfluo.make_manual_ab_initio_widget,Manual ab initio reconstruction,False,napari-spfluo.make_symmetrize_widget,Symmetrize,False,napari-spfluo.make_rotate_widget,Rotate,False,napari-spfluo.make_rotate_widget,Make rotate widget,napari_spfluo:RotateWidget,,,,,,,,napari-spfluo.make_generated_anisotropic,anisotropic,generate anisotropic data,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-spfluo.make_separate_widget,Make separate widget,napari_spfluo:run_separate,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-spfluo.make_dbscan_widget,Make DBSCAN widget,napari_spfluo:run_dbscan,napari-spfluo.make_hdbscan_widget,Make HDBSCAN widget,napari_spfluo:run_hdbscan,napari-spfluo.make_threshold_widget,Make Threshold widget,napari_spfluo:threshold_widget,napari-spfluo.make_merge_labels_widget,Make MergeLabels widget,napari_spfluo:MergeLabelsWidget,napari-spfluo.make_filter_widget,Make FilterSet widget,napari_spfluo:FilterLayerWidget,,napari-spfluo.make_separate_widget,Separate,False,napari-spfluo.make_dbscan_widget,DBSCAN,False,napari-spfluo.make_hdbscan_widget,HDBSCAN,False,napari-spfluo.make_threshold_widget,Threshold,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +354,napari-splinebox,0.0.3a0,splinebox,A plugin to create splines with napari.,Florian Aymanns," +Copyright (c) 2024, Florian Aymanns +All rights reserved. + +Redistribution and use in source and binary forms, with or without +modification, are permitted provided that the following conditions are met: + +* Redistributions of source code must retain the above copyright notice, this + list of conditions and the following disclaimer. + +* Redistributions in binary form must reproduce the above copyright notice, + this list of conditions and the following disclaimer in the documentation + and/or other materials provided with the distribution. + +* Neither the name of copyright holder nor the names of its + contributors may be used to endorse or promote products derived from + this software without specific prior written permission. + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ""AS IS"" +AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE +IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE +DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE +FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL +DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR +SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER +CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, +OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE +OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. +",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-splinebox.make_container_widget,Make threshold Container widget,napari_splinebox:SplineBox,,,,2.1,napari-splinebox,0.0.3a0,,A plugin to create splines with napari.,"# napari-splinebox + +[![License BSD-3](https://img.shields.io/pypi/l/napari-splinebox.svg?color=green)](https://github.com/EPFL-Center-for-Imaging/napari-splinebox/raw/main/LICENSE) +[![PyPI](https://img.shields.io/pypi/v/napari-splinebox.svg?color=green)](https://pypi.org/project/napari-splinebox) +[![Python Version](https://img.shields.io/pypi/pyversions/napari-splinebox.svg?color=green)](https://python.org) +[![tests](https://github.com/EPFL-Center-for-Imaging/napari-splinebox/workflows/tests/badge.svg)](https://github.com/EPFL-Center-for-Imaging/napari-splinebox/actions) +[![codecov](https://codecov.io/gh/EPFL-Center-for-Imaging/napari-splinebox/branch/main/graph/badge.svg)](https://codecov.io/gh/EPFL-Center-for-Imaging/napari-splinebox) +[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-splinebox)](https://napari-hub.org/plugins/napari-splinebox) + +A plugin to create splines with napari. + +---------------------------------- + +This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template. + + + +## Installation + +You can install `napari-splinebox` via [pip]: + + pip install napari-splinebox + + + +To install latest development version : + + pip install git+https://github.com/EPFL-Center-for-Imaging/napari-splinebox.git + + +## Contributing + +Contributions are very welcome. Tests can be run with [tox], please ensure +the coverage at least stays the same before you submit a pull request. + +## License + +Distributed under the terms of the [BSD-3] license, +""napari-splinebox"" is free and open source software + +## Issues + +If you encounter any problems, please [file an issue] along with a detailed description. + +[napari]: https://github.com/napari/napari +[Cookiecutter]: https://github.com/audreyr/cookiecutter +[@napari]: https://github.com/napari +[MIT]: http://opensource.org/licenses/MIT +[BSD-3]: http://opensource.org/licenses/BSD-3-Clause +[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt +[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt +[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0 +[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt +[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin + +[file an issue]: https://github.com/EPFL-Center-for-Imaging/napari-splinebox/issues + +[napari]: https://github.com/napari/napari +[tox]: https://tox.readthedocs.io/en/latest/ +[pip]: https://pypi.org/project/pip/ +[PyPI]: https://pypi.org/ +",text/markdown,,Florian Aymanns,florian.aymanns@epfl.ch," +Copyright (c) 2024, Florian Aymanns +All rights reserved. + +Redistribution and use in source and binary forms, with or without +modification, are permitted provided that the following conditions are met: + +* Redistributions of source code must retain the above copyright notice, this + list of conditions and the following disclaimer. + +* Redistributions in binary form must reproduce the above copyright notice, + this list of conditions and the following disclaimer in the documentation + and/or other materials provided with the distribution. + +* Neither the name of copyright holder nor the names of its + contributors may be used to endorse or promote products derived from + this software without specific prior written permission. + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ""AS IS"" +AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE +IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE +DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE +FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL +DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR +SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER +CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, +OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE +OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'splinebox', 'pandas', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.9,"['Bug Tracker, https://github.com/EPFL-Center-for-Imaging/napari-splinebox/issues', 'Documentation, https://github.com/EPFL-Center-for-Imaging/napari-splinebox#README.md', 'Source Code, https://github.com/EPFL-Center-for-Imaging/napari-splinebox', 'User Support, https://github.com/EPFL-Center-for-Imaging/napari-splinebox/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation']",,,,,,,,,,napari-splinebox.make_container_widget,SplineBox,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +355,napari-splinedist,0.3.1,SplineDist,A napari SplineDist plugin,Dr. Thorsten Beier,MIT,https://github.com/DerThorsten/napari-splinedist,65593ed87a5c2441efda4036,['conda'],,https://pypi.org/project/napari-splinedist,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-splinedist,http://api.anaconda.org/packages/conda-forge/napari-splinedist,http://anaconda.org/conda-forge/napari-splinedist,['0.3.1'],0.3.1,0.3.1,['noarch'],3.0,https://github.com/DerThorsten/napari-splinedist,['pyh9208f05_0'],0.3.1,conda-forge/napari-splinedist/0.3.1,1.0,0.0,2023-11-18 22:46:45.578000+00:00,2023-11-18 22:46:48.445000+00:00,conda,noarch/napari-splinedist-0.3.1-pyh9208f05_0.conda,0.0,MIT,False,python,"['magicgui', 'napari', 'napari-splineit >=0.3.0', 'numpy', 'opencv', 'pydantic', 'python >=3.8', 'qtpy', 'requests', 'splinedist >=0.1.2', 'stardist >=0.8.3', 'tensorflow']",noarch,1700347425931.0,None-any-None,pyh9208f05_0,2023-11-18 22:46:45.988000+00:00,b7a39b42040636a803ff283f16b7b5bb,c8d5c659ecf6b0ada149b470d316035fc645e1ca0758b653c56b807af73a77d1,292587.0,conda-forge/napari-splinedist/0.3.1/noarch/napari-splinedist-0.3.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-splinedist/0.3.1/noarch/napari-splinedist-0.3.1-pyh9208f05_0.conda,conda,0.3.1,conda-forge,['main'],public,,0.2.1,napari-splinedist.sample_data_bbbc038,Load sample data from SplineDist,napari_splinedist._sample_data:sample_data_bbbc038,,,,2.1,napari-splinedist,0.3.1,,A napari SplineDist plugin,"# napari-splinedist [![License MIT](https://img.shields.io/pypi/l/napari-splinedist.svg?color=green)](https://github.com/DerThorsten/napari-splinedist/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-splinedist.svg?color=green)](https://pypi.org/project/napari-splinedist) @@ -35598,8 +37325,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/DerThorsten/napari-splinedist,Dr. Thorsten Beier,derthorstebeier@gmail.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['pydantic', 'numpy', 'magicgui', 'qtpy', 'stardist (>=0.8.3)', 'splinedist (>=0.1.2)', 'napari-splineit (>=0.3.0)', 'requests', 'tensorflow', 'opencv-python-headless', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/DerThorsten/napari-splinedist/issues', 'Documentation, https://github.com/DerThorsten/napari-splinedist#README.md', 'Source Code, https://github.com/DerThorsten/napari-splinedist', 'User Support, https://github.com/DerThorsten/napari-splinedist/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-splinedist.sample_data_conic,Load sample data from SplineDist,napari_splinedist._sample_data:sample_data_conic,napari-splinedist.make_qwidget,Make example QWidget,napari_splinedist._widget:SplineDistWidget,,,,napari-splinedist.make_qwidget,Example QWidget,False,,,,,,,,,,,,,,,,,,,,napari-splinedist.sample_data_bbbc038,unique_id.1,bbbc038,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-splinedist.sample_data_conic,unique_id.2,conic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -339,napari-splineit,0.3.0,Napari SplineIt2,A napari plugin for spline manipulation,Thorsten Beier,BSD-3-Clause,https://github.com/uhlmanngroup/napari-splineit,62cbe999504465068c504a8f,['conda'],,https://github.com/uhlmanngroup/napari-splineit,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-splineit,http://api.anaconda.org/packages/conda-forge/napari-splineit,http://anaconda.org/conda-forge/napari-splineit,"['0.1.1', '0.2.0', '0.2.1', '0.3.0']",0.3.0,0.3.0,['noarch'],6.0,,['pyhd8ed1ab_0'],0.1.1,conda-forge/napari-splineit/0.1.1,1.0,0.0,2022-07-11 09:12:55.666000+00:00,2023-06-18 08:42:03.378000+00:00,conda,noarch/napari-splineit-0.1.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'numpy', 'python >=3.7', 'qtpy', 'scikit-image', 'scipy']",noarch,1657530655015.0,None-any-None,pyhd8ed1ab_0,2022-07-11 09:12:55.909000+00:00,404147895896818d445db423a2b2e881,None,21975.0,conda-forge/napari-splineit/0.1.1/noarch/napari-splineit-0.1.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-splineit/0.1.1/noarch/napari-splineit-0.1.1-pyhd8ed1ab_0.tar.bz2,conda,0.1.1,conda-forge,['main'],public,,0.2.1,napari-splineit.make_sample_data_coins,Coin sample data,napari_splineit._sample_data:make_sample_data_coins,napari-splineit.read_splineit,['*.splineit'],False,2.1,napari-splineit,0.3.0,,A napari plugin for spline manipulation,"# napari-splineit +",text/markdown,https://github.com/DerThorsten/napari-splinedist,Dr. Thorsten Beier,derthorstebeier@gmail.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['pydantic', 'numpy', 'magicgui', 'qtpy', 'stardist (>=0.8.3)', 'splinedist (>=0.1.2)', 'napari-splineit (>=0.3.0)', 'requests', 'tensorflow', 'opencv-python-headless', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/DerThorsten/napari-splinedist/issues', 'Documentation, https://github.com/DerThorsten/napari-splinedist#README.md', 'Source Code, https://github.com/DerThorsten/napari-splinedist', 'User Support, https://github.com/DerThorsten/napari-splinedist/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-splinedist.sample_data_conic,Load sample data from SplineDist,napari_splinedist._sample_data:sample_data_conic,napari-splinedist.make_qwidget,Make example QWidget,napari_splinedist._widget:SplineDistWidget,,,,napari-splinedist.make_qwidget,Example QWidget,False,,,,,,,,,,,,,,,,,,,,napari-splinedist.sample_data_bbbc038,unique_id.1,bbbc038,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-splinedist.sample_data_conic,unique_id.2,conic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +356,napari-splineit,0.3.0,Napari SplineIt2,A napari plugin for spline manipulation,Thorsten Beier,BSD-3-Clause,https://github.com/uhlmanngroup/napari-splineit,62cbe999504465068c504a8f,['conda'],,https://github.com/uhlmanngroup/napari-splineit,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-splineit,http://api.anaconda.org/packages/conda-forge/napari-splineit,http://anaconda.org/conda-forge/napari-splineit,"['0.1.1', '0.2.0', '0.2.1', '0.3.0']",0.3.0,0.3.0,['noarch'],6.0,,['pyhd8ed1ab_0'],0.1.1,conda-forge/napari-splineit/0.1.1,1.0,0.0,2022-07-11 09:12:55.666000+00:00,2023-06-18 08:42:03.378000+00:00,conda,noarch/napari-splineit-0.1.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'numpy', 'python >=3.7', 'qtpy', 'scikit-image', 'scipy']",noarch,1657530655015.0,None-any-None,pyhd8ed1ab_0,2022-07-11 09:12:55.909000+00:00,404147895896818d445db423a2b2e881,None,21975.0,conda-forge/napari-splineit/0.1.1/noarch/napari-splineit-0.1.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-splineit/0.1.1/noarch/napari-splineit-0.1.1-pyhd8ed1ab_0.tar.bz2,conda,0.1.1,conda-forge,['main'],public,,0.2.1,napari-splineit.make_sample_data_coins,Coin sample data,napari_splineit._sample_data:make_sample_data_coins,napari-splineit.read_splineit,['*.splineit'],False,2.1,napari-splineit,0.3.0,,A napari plugin for spline manipulation,"# napari-splineit [![License](https://img.shields.io/pypi/l/napari-splineit.svg?color=green)](https://github.com/uhlmanngroup/napari-splineit/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-splineit.svg?color=green)](https://pypi.org/project/napari-splineit) @@ -35666,8 +37393,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/uhlmanngroup/napari-splineit,Thorsten Beier,derthorstenbeier@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['numpy', 'qtpy', 'scikit-image', 'scipy', ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]",>=3.7,"['Bug Tracker, https://github.com/uhlmanngroup/napari-splineit/issues', 'Documentation, https://github.com/uhlmanngroup/napari-splineit#README.md', 'Source Code, https://github.com/uhlmanngroup/napari-splineit', 'User Support, https://github.com/uhlmanngroup/napari-splineit/issues']",['testing'],False,0.2.0,conda-forge/napari-splineit/0.2.0,0.2.1,conda-forge/napari-splineit/0.2.1,0.3.0,conda-forge/napari-splineit/0.3.0,conda,noarch/napari-splineit-0.2.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'numpy', 'python >=3.7', 'qtpy', 'scikit-image', 'scipy']",pyhd8ed1ab_0,1666168847446.0,None-any-None,noarch,2022-10-19 08:42:55.090000+00:00,e86c8916ee580994d517d3e88f99df56,None,23336.0,conda-forge/napari-splineit/0.2.0/noarch/napari-splineit-0.2.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-splineit/0.2.0/noarch/napari-splineit-0.2.0-pyhd8ed1ab_0.tar.bz2,conda,0.2.0,conda-forge,['main'],conda,noarch/napari-splineit-0.2.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'numpy', 'python >=3.7', 'qtpy', 'scikit-image', 'scipy']",noarch,1666570241369.0,None-any-None,pyhd8ed1ab_0,2022-10-24 00:12:43.189000+00:00,16748d17c4b94b7892af6e1714bbfa6b,None,23291.0,conda-forge/napari-splineit/0.2.1/noarch/napari-splineit-0.2.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-splineit/0.2.1/noarch/napari-splineit-0.2.1-pyhd8ed1ab_0.tar.bz2,conda,0.2.1,conda-forge,['main'],conda,noarch/napari-splineit-0.3.0-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'numpy', 'python >=3.7', 'qtpy', 'scikit-image', 'scipy']",BSD-3-Clause,python,1666640640595.0,2022-10-24 19:46:06.045000+00:00,d83cf48014c30b4a1410217d8a788b2f,None,24016.0,conda-forge/napari-splineit/0.3.0/noarch/napari-splineit-0.3.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-splineit/0.3.0/noarch/napari-splineit-0.3.0-pyhd8ed1ab_0.tar.bz2,conda,0.3.0,conda-forge,['main'],,napari-splineit.make_sample_data_s,toy-data small,napari_splineit._sample_data:make_sample_data_l,napari-splineit.make_sample_data_m,toy-data medium,napari_splineit._sample_data:make_sample_data_m,napari-splineit.make_sample_data_l,toy-data large,napari_splineit._sample_data:make_sample_data_l,napari-splineit.make_qwidget,Splineit-QWidget,False,,,,,,,,,,napari-splineit.make_sample_data_xl,toy-data extra large,napari_splineit._sample_data:make_sample_data_xl,napari-splineit.write_splineit_json,['shapes'],,,,,,napari-splineit.make_sample_data_coins,unique_id.1,Coins,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-splineit.make_sample_data_s,unique_id.2,small toy data,napari-splineit.make_sample_data_xxl,toy-data extra large,napari_splineit._sample_data:make_sample_data_xxl,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-splineit.make_qwidget,Make example SplineitQWidget,napari_splineit._widget:SplineitQWidget,napari-splineit.read_splineit,"Read "".splineit"" files",napari_splineit._reader:get_reader,napari-splineit.write_splineit_json,Save splineit control points to json,napari_splineit._writer:write_splineit_json,,,,,,,,,,['.splineit'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-splineit.make_sample_data_m,unique_id.3,medium toy data -340,napari-spofi,0.0.1,Spot Finder,napari plugin to interactively train and test a StarDist model,Christian Schulze,BSD-3-Clause,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-spofi.widget,Open Spot Finder widget,napari_spofi._widget:SpotFinderWidget,,,,2.1,napari-spofi,0.0.1,,napari plugin to interactively train and test a StarDist model,"# napari-spofi +",text/markdown,https://github.com/uhlmanngroup/napari-splineit,Thorsten Beier,derthorstenbeier@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['numpy', 'qtpy', 'scikit-image', 'scipy', ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]",>=3.7,"['Bug Tracker, https://github.com/uhlmanngroup/napari-splineit/issues', 'Documentation, https://github.com/uhlmanngroup/napari-splineit#README.md', 'Source Code, https://github.com/uhlmanngroup/napari-splineit', 'User Support, https://github.com/uhlmanngroup/napari-splineit/issues']",['testing'],False,0.2.0,conda-forge/napari-splineit/0.2.0,0.2.1,conda-forge/napari-splineit/0.2.1,0.3.0,conda-forge/napari-splineit/0.3.0,conda,noarch/napari-splineit-0.2.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'numpy', 'python >=3.7', 'qtpy', 'scikit-image', 'scipy']",pyhd8ed1ab_0,1666168847446.0,None-any-None,noarch,2022-10-19 08:42:55.090000+00:00,e86c8916ee580994d517d3e88f99df56,None,23336.0,conda-forge/napari-splineit/0.2.0/noarch/napari-splineit-0.2.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-splineit/0.2.0/noarch/napari-splineit-0.2.0-pyhd8ed1ab_0.tar.bz2,conda,0.2.0,conda-forge,['main'],conda,noarch/napari-splineit-0.2.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'numpy', 'python >=3.7', 'qtpy', 'scikit-image', 'scipy']",noarch,1666570241369.0,None-any-None,pyhd8ed1ab_0,2022-10-24 00:12:43.189000+00:00,16748d17c4b94b7892af6e1714bbfa6b,None,23291.0,conda-forge/napari-splineit/0.2.1/noarch/napari-splineit-0.2.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-splineit/0.2.1/noarch/napari-splineit-0.2.1-pyhd8ed1ab_0.tar.bz2,conda,0.2.1,conda-forge,['main'],conda,noarch/napari-splineit-0.3.0-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'numpy', 'python >=3.7', 'qtpy', 'scikit-image', 'scipy']",BSD-3-Clause,python,1666640640595.0,2022-10-24 19:46:06.045000+00:00,d83cf48014c30b4a1410217d8a788b2f,None,24016.0,conda-forge/napari-splineit/0.3.0/noarch/napari-splineit-0.3.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-splineit/0.3.0/noarch/napari-splineit-0.3.0-pyhd8ed1ab_0.tar.bz2,conda,0.3.0,conda-forge,['main'],,napari-splineit.make_sample_data_s,toy-data small,napari_splineit._sample_data:make_sample_data_l,napari-splineit.make_sample_data_m,toy-data medium,napari_splineit._sample_data:make_sample_data_m,napari-splineit.make_sample_data_l,toy-data large,napari_splineit._sample_data:make_sample_data_l,napari-splineit.make_qwidget,Splineit-QWidget,False,,,,,,,,,,napari-splineit.make_sample_data_xl,toy-data extra large,napari_splineit._sample_data:make_sample_data_xl,napari-splineit.write_splineit_json,['shapes'],,,,,,napari-splineit.make_sample_data_coins,unique_id.1,Coins,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-splineit.make_sample_data_s,unique_id.2,small toy data,napari-splineit.make_sample_data_xxl,toy-data extra large,napari_splineit._sample_data:make_sample_data_xxl,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-splineit.make_qwidget,Make example SplineitQWidget,napari_splineit._widget:SplineitQWidget,napari-splineit.read_splineit,"Read "".splineit"" files",napari_splineit._reader:get_reader,napari-splineit.write_splineit_json,Save splineit control points to json,napari_splineit._writer:write_splineit_json,,,,,,,['.splineit'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-splineit.make_sample_data_m,unique_id.3,medium toy data +357,napari-spofi,0.0.1,Spot Finder,napari plugin to interactively train and test a StarDist model,Christian Schulze,BSD-3-Clause,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-spofi.widget,Open Spot Finder widget,napari_spofi._widget:SpotFinderWidget,,,,2.1,napari-spofi,0.0.1,,napari plugin to interactively train and test a StarDist model,"# napari-spofi [![License BSD-3](https://img.shields.io/pypi/l/napari-spofi.svg?color=green)](https://github.com/githubuser/napari-spofi/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-spofi.svg?color=green)](https://pypi.org/project/napari-spofi) @@ -35786,8 +37513,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,,Christian Schulze,drchrisch@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Visualization']","['numpy', 'pandas', 'magicgui', 'qtpy', 'scikit-image', 'pyclesperanto', 'tensorflow', 'stardist', ""tox ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/drchrisch/napari-spofi/issues', 'Documentation, https://github.com/drchrisch/napari-spofi#README.md', 'Source Code, https://github.com/drchrisch/napari-spofi', 'User Support, https://github.com/drchrisch/napari-spofi/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Visualization']",,,,,,,,,,napari-spofi.widget,spot finder,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -341,napari-spotiflow,0.3.2,napari-spotiflow,Napari plugin for Spotiflow,"Albert Dominguez Mantes, Martin Weigert",BSD 3-Clause License,https://github.com/weigertlab/napari-spotiflow,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-spotiflow.reader,open csv data with napari-spotiflow,napari_spotiflow._io_hooks:napari_get_reader,napari-spotiflow.reader,['*.csv'],False,2.1,napari-spotiflow,0.3.2,,Napari plugin for Spotiflow,"[![License: BSD-3](https://img.shields.io/badge/License-BSD3-blue.svg)](https://www.gnu.org/licenses/bsd3) +",text/markdown,,Christian Schulze,drchrisch@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Visualization']","['numpy', 'pandas', 'magicgui', 'qtpy', 'scikit-image', 'pyclesperanto', 'tensorflow', 'stardist', ""tox ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/drchrisch/napari-spofi/issues', 'Documentation, https://github.com/drchrisch/napari-spofi#README.md', 'Source Code, https://github.com/drchrisch/napari-spofi', 'User Support, https://github.com/drchrisch/napari-spofi/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Visualization']",,,,,,,,,,napari-spofi.widget,spot finder,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +358,napari-spotiflow,0.3.4,napari-spotiflow,Napari plugin for Spotiflow,"Albert Dominguez Mantes, Martin Weigert",BSD 3-Clause License,https://github.com/weigertlab/napari-spotiflow,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-spotiflow.reader,open csv data with napari-spotiflow,napari_spotiflow._io_hooks:napari_get_reader,napari-spotiflow.reader,['*.csv'],False,2.1,napari-spotiflow,0.3.4,,Napari plugin for Spotiflow,"[![License: BSD-3](https://img.shields.io/badge/License-BSD3-blue.svg)](https://www.gnu.org/licenses/bsd3) [![PyPI](https://img.shields.io/pypi/v/napari-spotiflow.svg?color=green)](https://pypi.org/project/napari-spotiflow) [![Python Version](https://img.shields.io/pypi/pyversions/napari-spotiflow.svg?color=green)](https://python.org) [![tests](https://github.com/weigertlab/napari-spotiflow/workflows/tests/badge.svg)](https://github.com/weigertlab/napari-spotiflow/actions) @@ -35799,7 +37526,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc # Spotiflow: napari plugin -Napari plugin for *Spotiflow*, a deep learning-based, threshold-agnostic, and subpixel-accurate spot detection method for fluorescence microscopy. The plugin allows using several pre-trained models as well as user-trained ones. For the main repository, see [here](https://github.com/weigertlab/spotiflow). +Napari plugin for *Spotiflow*, a deep learning-based, threshold-agnostic, and subpixel-accurate spot detection method for 2D and 3D fluorescence microscopy images. The plugin allows using several pre-trained models as well as user-trained ones. For the main repository, see [here](https://github.com/weigertlab/spotiflow). https://github.com/weigertlab/napari-spotiflow/assets/11042162/02940480-daa9-4a21-8cf5-ad73c26c9838 @@ -35825,11 +37552,13 @@ pip install napari-spotiflow ## Supported input formats - 2D (YX, YXC or CYX) - 2D+t (TYX, TYXC or TCYX) +- 3D (ZYX, ZYXC or CZYX) +- 3D+t (TZYX, TZYXC or TCZYX) ## How to cite See the [main repository's _How to cite_ section](https://github.com/weigertlab/spotiflow?tab=readme-ov-file#how-to-cite). -",text/markdown,https://github.com/weigertlab/napari-spotiflow,"Albert Dominguez Mantes, Martin Weigert","albert.dominguezmantes@epfl.ch, martin.weigert@epfl.ch",BSD 3-Clause License,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['spotiflow', 'npe2', 'napari']","<3.12,>=3.9","['Bug Tracker, https://github.com/weigertlab/napari-spotiflow/issues', 'Documentation, https://github.com/weigertlab/napari-spotiflow#README.md', 'Source Code, https://github.com/weigertlab/napari-spotiflow', 'User Support, https://github.com/weigertlab/napari-spotiflow/issues']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-spotiflow.widget,Spotiflow,napari_spotiflow._dock_widget:plugin_wrapper,napari-spotiflow.data.hybiss_2d,HybISS (2D) sample,napari_spotiflow._sample_data:_test_image_hybiss_2d,napari-spotiflow.data.terra_2d,Terra (2D) sample,napari_spotiflow._sample_data:_test_image_terra_2d,napari-spotiflow.widget,Spotiflow widget,False,,,,,,,,,,napari-spotiflow.data.synth_3d,Synthetic (3D) sample,napari_spotiflow._sample_data:_test_image_synth_3d,,,,,,,,napari-spotiflow.data.hybiss_2d,hybiss,HybISS,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-spotiflow.data.terra_2d,terra,Terra,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-spotiflow.data.synth_3d,synth_3d,Synthetic (3D) -342,napari-spreadsheet,0.0.4,Spreadsheet,A spreadsheet widget for napari,Hanjin Liu,BSD-3-Clause,https://github.com/hanjinliu/napari-spreadsheet,65738da1913c959e78e87041,['conda'],,https://pypi.org/project/napari-spreadsheet,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-spreadsheet,http://api.anaconda.org/packages/conda-forge/napari-spreadsheet,http://anaconda.org/conda-forge/napari-spreadsheet,['0.0.4'],0.0.4,0.0.4,['noarch'],3.0,https://github.com/hanjinliu/napari-spreadsheet,['pyh9208f05_0'],0.0.4,conda-forge/napari-spreadsheet/0.0.4,1.0,0.0,2023-12-08 21:41:51.471000+00:00,2023-12-08 21:41:53.873000+00:00,conda,noarch/napari-spreadsheet-0.0.4-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'tabulous >=0.5.0']",noarch,1702071543457.0,None-any-None,pyh9208f05_0,2023-12-08 21:41:51.848000+00:00,19cb721d88b8c6769c78165e4d2fd8a5,73963176bf5012640bc0a01dc4a334c47a0beea5adc5bb0b05530487beaff369,17940.0,conda-forge/napari-spreadsheet/0.0.4/noarch/napari-spreadsheet-0.0.4-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-spreadsheet/0.0.4/noarch/napari-spreadsheet-0.0.4-pyh9208f05_0.conda,conda,0.0.4,conda-forge,['main'],public,,0.2.1,napari-spreadsheet.make_qwidget,Open spreadsheet,napari_spreadsheet._widget:MainWidget,napari-spreadsheet.read_table_data,"['*.txt', '*.dat', '*.csv', '*.xlsx']",False,2.1,napari-spreadsheet,0.0.4,,A spreadsheet widget for napari,"# napari-spreadsheet +",text/markdown,https://github.com/weigertlab/napari-spotiflow,"Albert Dominguez Mantes, Martin Weigert","albert.dominguezmantes@epfl.ch, martin.weigert@epfl.ch",BSD 3-Clause License,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['spotiflow', 'npe2', 'napari>=0.5']","<3.13,>=3.9","['Bug Tracker, https://github.com/weigertlab/napari-spotiflow/issues', 'Documentation, https://github.com/weigertlab/napari-spotiflow#README.md', 'Source Code, https://github.com/weigertlab/napari-spotiflow', 'User Support, https://github.com/weigertlab/napari-spotiflow/issues']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-spotiflow.widget,Spotiflow,napari_spotiflow._dock_widget:plugin_wrapper,napari-spotiflow.data.hybiss_2d,HybISS (2D) sample,napari_spotiflow._sample_data:_test_image_hybiss_2d,napari-spotiflow.data.terra_2d,Terra (2D) sample,napari_spotiflow._sample_data:_test_image_terra_2d,napari-spotiflow.widget,Spotiflow widget,False,,,,,,,,,,napari-spotiflow.data.synth_3d,Synthetic (3D) sample,napari_spotiflow._sample_data:_test_image_synth_3d,,,,,,,,napari-spotiflow.data.hybiss_2d,hybiss,HybISS,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-spotiflow.data.terra_2d,terra,Terra,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-spotiflow.data.synth_3d,synth_3d,Synthetic (3D) +359,napari-spreadsheet,0.0.4,Spreadsheet,A spreadsheet widget for napari,Hanjin Liu,BSD-3-Clause,https://github.com/hanjinliu/napari-spreadsheet,65738da1913c959e78e87041,['conda'],,https://pypi.org/project/napari-spreadsheet,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-spreadsheet,http://api.anaconda.org/packages/conda-forge/napari-spreadsheet,http://anaconda.org/conda-forge/napari-spreadsheet,['0.0.4'],0.0.4,0.0.4,['noarch'],3.0,https://github.com/hanjinliu/napari-spreadsheet,['pyh9208f05_0'],0.0.4,conda-forge/napari-spreadsheet/0.0.4,1.0,0.0,2023-12-08 21:41:51.471000+00:00,2023-12-08 21:41:53.873000+00:00,conda,noarch/napari-spreadsheet-0.0.4-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'tabulous >=0.5.0']",noarch,1702071543457.0,None-any-None,pyh9208f05_0,2023-12-08 21:41:51.848000+00:00,19cb721d88b8c6769c78165e4d2fd8a5,73963176bf5012640bc0a01dc4a334c47a0beea5adc5bb0b05530487beaff369,17940.0,conda-forge/napari-spreadsheet/0.0.4/noarch/napari-spreadsheet-0.0.4-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-spreadsheet/0.0.4/noarch/napari-spreadsheet-0.0.4-pyh9208f05_0.conda,conda,0.0.4,conda-forge,['main'],public,,0.2.1,napari-spreadsheet.make_qwidget,Open spreadsheet,napari_spreadsheet._widget:MainWidget,napari-spreadsheet.read_table_data,"['*.txt', '*.dat', '*.csv', '*.xlsx']",False,2.1,napari-spreadsheet,0.0.4,,A spreadsheet widget for napari,"# napari-spreadsheet [![License BSD-3](https://img.shields.io/pypi/l/napari-spreadsheet.svg?color=green)](https://github.com/hanjinliu/napari-spreadsheet/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-spreadsheet.svg?color=green)](https://pypi.org/project/napari-spreadsheet) @@ -35906,8 +37635,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/hanjinliu/napari-spreadsheet,Hanjin Liu,liuhanjin-sc@g.ecc.u-tokyo.ac.jp,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Topic :: Scientific/Engineering :: Image Processing']","['magicgui', 'napari', 'numpy', 'pandas', 'qtpy', 'tabulous (>=0.5.0)', ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/hanjinliu/napari-spreadsheet/issues', 'Documentation, https://github.com/hanjinliu/napari-spreadsheet#README.md', 'Source Code, https://github.com/hanjinliu/napari-spreadsheet', 'User Support, https://github.com/hanjinliu/napari-spreadsheet/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-spreadsheet.read_table_data,Open table data,napari_spreadsheet._reader:get_reader,,,,,,,napari-spreadsheet.make_qwidget,Spreadsheet,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -343,napari-stable-diffusion,0.1.1,Stable Diffusion,A demo of stable diffusion in napari,Kyle Harrington,BSD-3-Clause,https://github.com/kephale/napari-stable-diffusion,643da75761e1ea32f8c443c8,['conda'],,https://github.com/kephale/napari-stable-diffusion,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-stable-diffusion,http://api.anaconda.org/packages/conda-forge/napari-stable-diffusion,http://anaconda.org/conda-forge/napari-stable-diffusion,"['0.0.1', '0.1.1']",0.0.1,0.1.1,['noarch'],4.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-stable-diffusion/0.0.1,1.0,0.0,2023-04-17 20:08:51.151000+00:00,2023-07-25 22:59:48.386000+00:00,conda,noarch/napari-stable-diffusion-0.0.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['diffusers', 'magicgui', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.8,<3.11', 'pytorch', 'qtpy', 'transformers']",noarch,1681761919636.0,None-any-None,pyhd8ed1ab_0,2023-04-17 20:08:51.775000+00:00,26ce102625f72c61ffb39090ebff9e51,402c2f64234290b019113c89921699cd3fa44a54eff34f34a91152838b778a1e,13770.0,conda-forge/napari-stable-diffusion/0.0.1/noarch/napari-stable-diffusion-0.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-stable-diffusion/0.0.1/noarch/napari-stable-diffusion-0.0.1-pyhd8ed1ab_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-stable-diffusion.make_qwidget,Stable Diffusion: Text to Image,napari_stable_diffusion._widget:StableDiffusionWidget,,,,2.1,napari-stable-diffusion,0.1.1,,A demo of stable diffusion in napari,"# napari-stable-diffusion +",text/markdown,https://github.com/hanjinliu/napari-spreadsheet,Hanjin Liu,liuhanjin-sc@g.ecc.u-tokyo.ac.jp,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Topic :: Scientific/Engineering :: Image Processing']","['magicgui', 'napari', 'numpy', 'pandas', 'qtpy', 'tabulous (>=0.5.0)', ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/hanjinliu/napari-spreadsheet/issues', 'Documentation, https://github.com/hanjinliu/napari-spreadsheet#README.md', 'Source Code, https://github.com/hanjinliu/napari-spreadsheet', 'User Support, https://github.com/hanjinliu/napari-spreadsheet/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-spreadsheet.read_table_data,Open table data,napari_spreadsheet._reader:get_reader,,,,,,,napari-spreadsheet.make_qwidget,Spreadsheet,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +360,napari-stable-diffusion,0.1.1,Stable Diffusion,A demo of stable diffusion in napari,Kyle Harrington,BSD-3-Clause,https://github.com/kephale/napari-stable-diffusion,643da75761e1ea32f8c443c8,['conda'],,https://github.com/kephale/napari-stable-diffusion,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-stable-diffusion,http://api.anaconda.org/packages/conda-forge/napari-stable-diffusion,http://anaconda.org/conda-forge/napari-stable-diffusion,"['0.0.1', '0.1.1']",0.0.1,0.1.1,['noarch'],4.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-stable-diffusion/0.0.1,1.0,0.0,2023-04-17 20:08:51.151000+00:00,2023-07-25 22:59:48.386000+00:00,conda,noarch/napari-stable-diffusion-0.0.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['diffusers', 'magicgui', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.8,<3.11', 'pytorch', 'qtpy', 'transformers']",noarch,1681761919636.0,None-any-None,pyhd8ed1ab_0,2023-04-17 20:08:51.775000+00:00,26ce102625f72c61ffb39090ebff9e51,402c2f64234290b019113c89921699cd3fa44a54eff34f34a91152838b778a1e,13770.0,conda-forge/napari-stable-diffusion/0.0.1/noarch/napari-stable-diffusion-0.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-stable-diffusion/0.0.1/noarch/napari-stable-diffusion-0.0.1-pyhd8ed1ab_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-stable-diffusion.make_qwidget,Stable Diffusion: Text to Image,napari_stable_diffusion._widget:StableDiffusionWidget,,,,2.1,napari-stable-diffusion,0.1.1,,A demo of stable diffusion in napari,"# napari-stable-diffusion [![License BSD-3](https://img.shields.io/pypi/l/napari-stable-diffusion.svg?color=green)](https://github.com/kephale/napari-stable-diffusion/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-stable-diffusion.svg?color=green)](https://pypi.org/project/napari-stable-diffusion) @@ -36002,8 +37731,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/kephale/napari-stable-diffusion,Kyle Harrington,napari@kyleharrington.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['napari', 'napari-plugin-engine (>=0.1.4)', 'numpy', 'magicgui', 'qtpy', 'diffusers', 'transformers', 'torch', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/kephale/napari-stable-diffusion/issues', 'Documentation, https://github.com/kephale/napari-stable-diffusion#README.md', 'Source Code, https://github.com/kephale/napari-stable-diffusion', 'User Support, https://github.com/kephale/napari-stable-diffusion/issues']",['testing'],False,0.1.1,conda-forge/napari-stable-diffusion/0.1.1,,,,,conda,noarch/napari-stable-diffusion-0.1.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['diffusers', 'magicgui', 'napari', 'numpy', 'python >=3.8,<3.11', 'pytorch', 'qtpy']",pyhd8ed1ab_0,1690325804062.0,None-any-None,noarch,2023-07-25 22:59:46.943000+00:00,42717eb077bec617c8f789ecb2b07571,652f587ee6ab8d44bfe1f8133e284f3aadd45561eff032cebc5c8e42a77cca0d,14132.0,conda-forge/napari-stable-diffusion/0.1.1/noarch/napari-stable-diffusion-0.1.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-stable-diffusion/0.1.1/noarch/napari-stable-diffusion-0.1.1-pyhd8ed1ab_0.conda,conda,0.1.1,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-stable-diffusion.make_img2img_qwidget,Stable Diffusion: Image to Image,napari_stable_diffusion._widget_img2img:StableDiffusionImg2ImgWidget,napari-stable-diffusion.make_inpaint_qwidget,Stable Diffusion: Inpaint,napari_stable_diffusion._widget_inpaint:StableDiffusionInpaintWidget,,,,napari-stable-diffusion.make_qwidget,Text to Image,False,napari-stable-diffusion.make_img2img_qwidget,Image to Image,False,napari-stable-diffusion.make_inpaint_qwidget,Inpainting,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -344,napari-steinpose,0.1.0,napari Steinpose,A plugin to process Imaging Mass Cytometry data with cellpose and steinbock,Guillaume Witz,BSD-3-Clause,https://github.com/guiwitz/napari-steinpose,6574220d8853ce2406927e25,['conda'],,https://pypi.org/project/napari-steinpose,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-steinpose,http://api.anaconda.org/packages/conda-forge/napari-steinpose,http://anaconda.org/conda-forge/napari-steinpose,['0.1.0'],0.1.0,0.1.0,['noarch'],3.0,https://github.com/guiwitz/napari-steinpose,['pyh9208f05_0'],0.1.0,conda-forge/napari-steinpose/0.1.0,1.0,0.0,2023-12-09 08:15:04.879000+00:00,2023-12-09 08:15:09.398000+00:00,conda,noarch/napari-steinpose-0.1.0-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['aicsimageio', 'cellpose', 'magicgui', 'matplotlib-base', 'napari', 'numpy', 'pandas', 'python >=3.8', 'pytorch >=1.11.0', 'qtpy', 'readimc', 'steinbock']",noarch,1702109515494.0,None-any-None,pyh9208f05_0,2023-12-09 08:15:06.726000+00:00,8e5b2bd8e2ae9dfa6f3a0e9d775daa02,1fe95e4b03b5433da641ffd7b125712f5d63748590afc592a168ba2ac64e503c,1552535.0,conda-forge/napari-steinpose/0.1.0/noarch/napari-steinpose-0.1.0-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-steinpose/0.1.0/noarch/napari-steinpose-0.1.0-pyh9208f05_0.conda,conda,0.1.0,conda-forge,['main'],public,,0.2.1,napari-steinpose.get_reader,Open data with napari Steinopse,napari_steinpose._reader:napari_get_reader_mcd,napari-steinpose.get_reader,['*.mcd'],False,2.1,napari-steinpose,0.1.0,,A plugin to process Imaging Mass Cytometry data with cellpose and steinbock,"# napari-steinpose +",text/markdown,https://github.com/kephale/napari-stable-diffusion,Kyle Harrington,napari@kyleharrington.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['napari', 'napari-plugin-engine (>=0.1.4)', 'numpy', 'magicgui', 'qtpy', 'diffusers', 'transformers', 'torch', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/kephale/napari-stable-diffusion/issues', 'Documentation, https://github.com/kephale/napari-stable-diffusion#README.md', 'Source Code, https://github.com/kephale/napari-stable-diffusion', 'User Support, https://github.com/kephale/napari-stable-diffusion/issues']",['testing'],False,0.1.1,conda-forge/napari-stable-diffusion/0.1.1,,,,,conda,noarch/napari-stable-diffusion-0.1.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['diffusers', 'magicgui', 'napari', 'numpy', 'python >=3.8,<3.11', 'pytorch', 'qtpy']",pyhd8ed1ab_0,1690325804062.0,None-any-None,noarch,2023-07-25 22:59:46.943000+00:00,42717eb077bec617c8f789ecb2b07571,652f587ee6ab8d44bfe1f8133e284f3aadd45561eff032cebc5c8e42a77cca0d,14132.0,conda-forge/napari-stable-diffusion/0.1.1/noarch/napari-stable-diffusion-0.1.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-stable-diffusion/0.1.1/noarch/napari-stable-diffusion-0.1.1-pyhd8ed1ab_0.conda,conda,0.1.1,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-stable-diffusion.make_img2img_qwidget,Stable Diffusion: Image to Image,napari_stable_diffusion._widget_img2img:StableDiffusionImg2ImgWidget,napari-stable-diffusion.make_inpaint_qwidget,Stable Diffusion: Inpaint,napari_stable_diffusion._widget_inpaint:StableDiffusionInpaintWidget,,,,napari-stable-diffusion.make_qwidget,Text to Image,False,napari-stable-diffusion.make_img2img_qwidget,Image to Image,False,napari-stable-diffusion.make_inpaint_qwidget,Inpainting,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +361,napari-steinpose,0.1.0,napari Steinpose,A plugin to process Imaging Mass Cytometry data with cellpose and steinbock,Guillaume Witz,BSD-3-Clause,https://github.com/guiwitz/napari-steinpose,6574220d8853ce2406927e25,['conda'],,https://pypi.org/project/napari-steinpose,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-steinpose,http://api.anaconda.org/packages/conda-forge/napari-steinpose,http://anaconda.org/conda-forge/napari-steinpose,['0.1.0'],0.1.0,0.1.0,['noarch'],3.0,https://github.com/guiwitz/napari-steinpose,['pyh9208f05_0'],0.1.0,conda-forge/napari-steinpose/0.1.0,1.0,0.0,2023-12-09 08:15:04.879000+00:00,2023-12-09 08:15:09.398000+00:00,conda,noarch/napari-steinpose-0.1.0-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['aicsimageio', 'cellpose', 'magicgui', 'matplotlib-base', 'napari', 'numpy', 'pandas', 'python >=3.8', 'pytorch >=1.11.0', 'qtpy', 'readimc', 'steinbock']",noarch,1702109515494.0,None-any-None,pyh9208f05_0,2023-12-09 08:15:06.726000+00:00,8e5b2bd8e2ae9dfa6f3a0e9d775daa02,1fe95e4b03b5433da641ffd7b125712f5d63748590afc592a168ba2ac64e503c,1552535.0,conda-forge/napari-steinpose/0.1.0/noarch/napari-steinpose-0.1.0-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-steinpose/0.1.0/noarch/napari-steinpose-0.1.0-pyh9208f05_0.conda,conda,0.1.0,conda-forge,['main'],public,,0.2.1,napari-steinpose.get_reader,Open data with napari Steinopse,napari_steinpose._reader:napari_get_reader_mcd,napari-steinpose.get_reader,['*.mcd'],False,2.1,napari-steinpose,0.1.0,,A plugin to process Imaging Mass Cytometry data with cellpose and steinbock,"# napari-steinpose [![License BSD-3](https://img.shields.io/pypi/l/napari-steinpose.svg?color=green)](https://github.com/guiwitz/napari-steinpose/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-steinpose.svg?color=green)](https://pypi.org/project/napari-steinpose) @@ -36121,8 +37850,65 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/guiwitz/napari-steinpose,Guillaume Witz,guillaume.witz@unibe.ch,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Topic :: Scientific/Engineering :: Image Processing']","['torch (==1.11.0)', 'cellpose', 'numpy', 'magicgui', 'qtpy', 'matplotlib', 'readimc', 'steinbock', 'pandas', 'aicsimageio', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest-order ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/guiwitz/napari-steinpose/issues', 'Documentation, https://github.com/guiwitz/napari-steinpose#README.md', 'Source Code, https://github.com/guiwitz/napari-steinpose', 'User Support, https://github.com/guiwitz/napari-steinpose/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-steinpose.make_qwidget,Main widget,napari_steinpose.steinpose_widget:SteinposeWidget,,,,,,,napari-steinpose.make_qwidget,Steinpose Widget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -345,napari-stl-exporter,0.1.5,napari-stl-exporter,Exports label images to 3D-printable stl files.,Johannes Soltwedel,BSD-3-Clause,https://github.com/jo-mueller/napari-stl-exporter.git,61fa82a039552dcb5990cf37,['conda'],,https://github.com/jo-mueller/napari-stl-exporter,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-stl-exporter,http://api.anaconda.org/packages/conda-forge/napari-stl-exporter,http://anaconda.org/conda-forge/napari-stl-exporter,"['0.0.5', '0.0.6', '0.0.10', '0.0.11', '0.1.4', '0.1.5']",0.1.4,0.1.5,['noarch'],8.0,,['pyhd8ed1ab_0'],0.0.5,conda-forge/napari-stl-exporter/0.0.5,1.0,0.0,2022-02-02 13:09:50.271000+00:00,2023-07-25 22:34:24.240000+00:00,conda,noarch/napari-stl-exporter-0.0.5-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-plugin-engine >=0.1.4', 'numpy', 'numpy-stl', 'python >=3.7', 'scikit-image']",noarch,1643807306777.0,None-any-None,pyhd8ed1ab_0,2022-02-02 13:09:50.815000+00:00,5817606388aa6be6f4b33eaf7e93c6d2,None,9848.0,conda-forge/napari-stl-exporter/0.0.5/noarch/napari-stl-exporter-0.0.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-stl-exporter/0.0.5/noarch/napari-stl-exporter-0.0.5-pyhd8ed1ab_0.tar.bz2,conda,0.0.5,conda-forge,['main'],public,,0.1.0,napari-stl-exporter.write_labels,Write Labels,napari_stl_exporter._writer:napari_write_labels,napari-stl-exporter.import_surface,"['*.stl', '*.ply', '*.obj']",False,2.1,napari-stl-exporter,0.1.5,,Exports label images to 3D-printable stl files.,"# napari-stl-exporter +",text/markdown,https://github.com/guiwitz/napari-steinpose,Guillaume Witz,guillaume.witz@unibe.ch,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Topic :: Scientific/Engineering :: Image Processing']","['torch (==1.11.0)', 'cellpose', 'numpy', 'magicgui', 'qtpy', 'matplotlib', 'readimc', 'steinbock', 'pandas', 'aicsimageio', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest-order ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/guiwitz/napari-steinpose/issues', 'Documentation, https://github.com/guiwitz/napari-steinpose#README.md', 'Source Code, https://github.com/guiwitz/napari-steinpose', 'User Support, https://github.com/guiwitz/napari-steinpose/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-steinpose.make_qwidget,Main widget,napari_steinpose.steinpose_widget:SteinposeWidget,,,,,,,napari-steinpose.make_qwidget,Steinpose Widget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +362,napari-stitcher,0.1.0,napari-stitcher,Stitch napari image layers in 2-3D+t,Marvin Albert,BSD-3-Clause,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-stitcher.get_reader,Open data with Stitcher,napari_stitcher._reader:napari_get_reader,napari-stitcher.get_reader,['*.czi'],False,2.1,napari-stitcher,0.1.0,,Stitch napari image layers in 2-3D+t,"[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-stitcher)](https://napari-hub.org/plugins/napari-stitcher) +[![License {{cookiecutter.license}}](https://img.shields.io/pypi/l/napari-stitcher.svg?color=green)](https://github.com/multiview-stitcher/napari-stitcher/raw/main/LICENSE) +[![PyPI](https://img.shields.io/pypi/v/napari-stitcher.svg?color=green)](https://pypi.org/project/napari-stitcher) +[![Python Version](https://img.shields.io/pypi/pyversions/napari-stitcher.svg?color=green)](https://python.org) +[![tests](https://github.com/multiview-stitcher/napari-stitcher/actions/workflows/test_and_deploy.yml/badge.svg)](https://github.com/multiview-stitcher/napari-stitcher/actions) +[![codecov](https://codecov.io/gh/multiview-stitcher/napari-stitcher/branch/main/graph/badge.svg)](https://codecov.io/gh/multiview-stitcher/napari-stitcher) +[![DOI](https://zenodo.org/badge/697999800.svg)](https://zenodo.org/doi/10.5281/zenodo.13151252) + + +# napari-stitcher + +A napari plugin for stitching large multi-positioning datasets in 2/3D+t using [`multiview-stitcher`](https://github.com/multiview-stitcher/multiview-stitcher). + +![](docs/images/napari-stitcher-loaded-mosaic-annotated.png) +Image data by Arthur Michaut @ Jérôme Gros Lab @ Institut Pasteur. + +#### Quick guide: + +1. Directly stitch napari layers: Use napari to load, visualize and [preposition](prearrangement.md) the tiles to be stitched. +2. When working with multi-channel data, stick to the following [naming convention](naming_convention.md): `{tile} :: {channel}`. +3. Load either all or just a subset of the layers into the plugin. +4. Choose registration options: registration channel, binning and more. +5. Stitching = registration (refining the positions, optional) + fusion (joining the tiles into a single image). +6. The registration result is shown in the viewer and the fused channels are added as new layers. + +## Demo + +https://github.com/user-attachments/assets/8773e49f-af18-4ff3-ab2f-2a5f1b1cadf2 + +This demo uses the awesome [`napari-threedee`](https://github.com/napari-threedee/napari-threedee) for prepositioning the tiles. Image data: [BigStitcher](https://imagej.net/plugins/bigstitcher/). + +## Documentation + +Head over to the [user guide](https://multiview-stitcher.github.io/napari-stitcher/main/) for more details. + +## Installation + +You can install `napari-stitcher` via `pip`: + +```bash +pip install napari-stitcher +``` + +For more installation options, see the [installation docs](https://multiview-stitcher.github.io/napari-stitcher/main/installation/). + +## Contributing + +Contributions are very welcome. Tests can be run with `tox`. + +## License + +Distributed under the terms of the [BSD-3] license, ""napari-stitcher"" is free and open source software + +## Issues + +If you encounter any problems, please [file an issue](https://github.com/multiview-stitcher/napari-stitcher/issues) along with a detailed description. +",text/markdown,,Marvin Albert,marvin.albert@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy>=1.18', 'magicgui', 'qtpy', 'tifffile>=2022.7.28', 'multiview-stitcher[aicsimageio]==0.1.14', 'spatial-image==0.3.0', 'multiscale-spatial-image==0.11.2', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""', 'tox; extra == ""testing-no-gui""', 'pytest; extra == ""testing-no-gui""', 'pytest-cov; extra == ""testing-no-gui""', 'pytest-qt; extra == ""testing-no-gui""']",>=3.9,"['Bug Tracker, https://github.com/multiview-stitcher/napari-stitcher/issues', 'Documentation, https://multiview-stitcher.github.io/napari-stitcher/', 'Source Code, https://github.com/multiview-stitcher/napari-stitcher', 'User Support, https://github.com/multiview-stitcher/napari-stitcher/issues']","['testing', 'testing_no_gui']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-stitcher.write_multiple,Save multi-layer data with Stitcher,napari_stitcher._writer:write_multiple,napari-stitcher.write_single_image,Save image data with Stitcher,napari_stitcher._writer:write_single_image,napari-stitcher.make_sample_data,Load sample data from Stitcher,napari_stitcher._sample_data:make_sample_data,napari-stitcher.make_qwidget,Stitcher,False,napari-stitcher.make_mosaic,Mosaic arrangement,False,,,,,,,napari-stitcher.drifting_timelapse_with_stage_shifts_no_overlap_2d,Load sample data from Stitcher,napari_stitcher._sample_data:drifting_timelapse_with_stage_shifts_no_overlap_2d,napari-stitcher.write_multiple,['image+'],,,,,,napari-stitcher.make_sample_data,unique_id.1,Mosaic,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-stitcher.drifting_timelapse_with_stage_shifts_no_overlap_2d,unique_id.2,2D drifting timelapse with stage shifts and no overlap,napari-stitcher.timelapse_with_stage_shifts_with_overlap_3d,Load sample data from Stitcher,napari_stitcher._sample_data:timelapse_with_stage_shifts_with_overlap_3d,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-stitcher.make_qwidget,Make Stitcher QWidget,napari_stitcher._stitcher_widget:StitcherQWidget,napari-stitcher.make_mosaic,Make Stitcher Mosaic,napari_stitcher._mosaic_widget:MosaicQWidget,,,,,,,,,,['.tif'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-stitcher.timelapse_with_stage_shifts_with_overlap_3d,unique_id.3,3D timelapse with stage shifts and overlap +363,napari-stl-exporter,0.1.5,napari-stl-exporter,Exports label images to 3D-printable stl files.,Johannes Soltwedel,BSD-3-Clause,https://github.com/jo-mueller/napari-stl-exporter.git,61fa82a039552dcb5990cf37,['conda'],,https://github.com/jo-mueller/napari-stl-exporter,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-stl-exporter,http://api.anaconda.org/packages/conda-forge/napari-stl-exporter,http://anaconda.org/conda-forge/napari-stl-exporter,"['0.0.5', '0.0.6', '0.0.10', '0.0.11', '0.1.4', '0.1.5']",0.1.4,0.1.5,['noarch'],8.0,,['pyhd8ed1ab_0'],0.0.5,conda-forge/napari-stl-exporter/0.0.5,1.0,0.0,2022-02-02 13:09:50.271000+00:00,2023-07-25 22:34:24.240000+00:00,conda,noarch/napari-stl-exporter-0.0.5-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-plugin-engine >=0.1.4', 'numpy', 'numpy-stl', 'python >=3.7', 'scikit-image']",noarch,1643807306777.0,None-any-None,pyhd8ed1ab_0,2022-02-02 13:09:50.815000+00:00,5817606388aa6be6f4b33eaf7e93c6d2,None,9848.0,conda-forge/napari-stl-exporter/0.0.5/noarch/napari-stl-exporter-0.0.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-stl-exporter/0.0.5/noarch/napari-stl-exporter-0.0.5-pyhd8ed1ab_0.tar.bz2,conda,0.0.5,conda-forge,['main'],public,,0.1.0,napari-stl-exporter.write_labels,Write Labels,napari_stl_exporter._writer:napari_write_labels,napari-stl-exporter.import_surface,"['*.stl', '*.ply', '*.obj']",False,2.1,napari-stl-exporter,0.1.5,,Exports label images to 3D-printable stl files.,"# napari-stl-exporter [![License](https://img.shields.io/pypi/l/napari-stl-exporter.svg?color=green)](https://github.com/jo-mueller/napari-stl-exporter/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-stl-exporter.svg?color=green)](https://pypi.org/project/napari-stl-exporter) @@ -36251,8 +38037,8 @@ If you encounter any problems, please [file an issue](https://github.com/jo-muel [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/jo-mueller/napari-stl-exporter.git,Johannes Soltwedel,johannes_richard.soltwedel@tu-dresden.de,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari', 'scikit-image', 'vedo (>=2023.4.6)', 'npe2', 'numpy']",>=3.7,"['Project Site, https://github.com/jo-mueller/napari-stl-exporter', 'Report Issues, https://github.com/jo-mueller/napari-stl-exporter/issues', 'Documentation, https://pypi.org/project/napari-stl-exporter/', 'User Support, https://github.com/jo-mueller/napari-stl-exporter/issues', 'Twitter, https://twitter.com/jm_mightypirate']",,False,0.0.6,conda-forge/napari-stl-exporter/0.0.6,0.0.10,conda-forge/napari-stl-exporter/0.0.10,0.0.11,conda-forge/napari-stl-exporter/0.0.11,conda,noarch/napari-stl-exporter-0.0.6-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'numpy-stl', 'python >=3.7', 'scikit-image', 'vedo']",pyhd8ed1ab_0,1649947386817.0,None-any-None,noarch,2022-04-14 14:45:55.559000+00:00,4ccacb90f38ebae1f432f3ebb3f7e3a6,None,10163.0,conda-forge/napari-stl-exporter/0.0.6/noarch/napari-stl-exporter-0.0.6-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-stl-exporter/0.0.6/noarch/napari-stl-exporter-0.0.6-pyhd8ed1ab_0.tar.bz2,conda,0.0.6,conda-forge,['main'],conda,noarch/napari-stl-exporter-0.0.10-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'npe2', 'numpy', 'python >=3.7', 'scikit-image', 'vedo']",noarch,1654704172788.0,None-any-None,pyhd8ed1ab_0,2022-06-08 16:06:14.656000+00:00,75bf9420efac77ca50449a9164bb53d3,None,11272.0,conda-forge/napari-stl-exporter/0.0.10/noarch/napari-stl-exporter-0.0.10-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-stl-exporter/0.0.10/noarch/napari-stl-exporter-0.0.10-pyhd8ed1ab_0.tar.bz2,conda,0.0.10,conda-forge,['main'],conda,noarch/napari-stl-exporter-0.0.11-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-plugin-engine >=0.1.4', 'npe2', 'numpy', 'python >=3.7', 'scikit-image', 'vedo']",BSD-3-Clause,python,1662430779603.0,2022-09-06 02:22:48.712000+00:00,4c2c525483afbf29a1624c5798c02837,None,269687.0,conda-forge/napari-stl-exporter/0.0.11/noarch/napari-stl-exporter-0.0.11-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-stl-exporter/0.0.11/noarch/napari-stl-exporter-0.0.11-pyhd8ed1ab_0.tar.bz2,conda,0.0.11,conda-forge,['main'],,napari-stl-exporter.write_surface,Write Surface,napari_stl_exporter._writer:napari_write_surfaces,napari-stl-exporter.make_pyramid_label,Create a label image of a pyramid,napari_stl_exporter._sample_data:make_pyramid_label,napari-stl-exporter.make_pyramid_surface,Create a surface image of a pyramid,napari_stl_exporter._sample_data:make_pyramid_surface,napari-stl-exporter.convert_image_to_surface,2D Image to surface,False,napari-stl-exporter.extrude,Extrude mesh,False,,,,,,,napari-stl-exporter.import_surface,Read surface data from supported file types,napari_stl_exporter._reader:get_reader,napari-stl-exporter.write_labels,['labels'],labels,napari-stl-exporter.write_surface,['surface'],"['.stl', '.ply', '.obj']",surface,napari-stl-exporter.make_pyramid_label,PLL,Pyramid label image,0.1.4,conda-forge/napari-stl-exporter/0.1.4,0.1.5,conda-forge/napari-stl-exporter/0.1.5,,,conda,noarch/napari-stl-exporter-0.1.4-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'npe2', 'numpy', 'python >=3.7', 'scikit-image', 'vedo']",noarch,1682248332597.0,None-any-None,pyhd8ed1ab_0,2023-04-23 11:14:58.977000+00:00,9046f57ea4ed5ee8b9ba080df7676fed,ab7a098cc6af8f227cf2d508264b882d31f27a1276083b8cc986491a1850fe03,218849.0,conda-forge/napari-stl-exporter/0.1.4/noarch/napari-stl-exporter-0.1.4-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-stl-exporter/0.1.4/noarch/napari-stl-exporter-0.1.4-pyhd8ed1ab_0.conda,conda,0.1.4,conda-forge,['main'],conda,noarch/napari-stl-exporter-0.1.5-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'napari-plugin-engine >=0.1.4', 'npe2', 'numpy', 'python >=3.7', 'scikit-image', 'vedo >=2023.4.6']",noarch,1690324268711.0,None-any-None,pyhd8ed1ab_0,2023-07-25 22:34:22.687000+00:00,151f616eae9903c7bd121dec5c4a2112,3173cba4047589440968a09f72ff8f5d916aab835ec8ae02c26e2fa9a2dea541,224216.0,conda-forge/napari-stl-exporter/0.1.5/noarch/napari-stl-exporter-0.1.5-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-stl-exporter/0.1.5/noarch/napari-stl-exporter-0.1.5-pyhd8ed1ab_0.conda,conda,0.1.5,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,napari-stl-exporter.make_pyramid_surface,PSL,Pyramid surface,napari-stl-exporter.convert_image_to_surface,Convert 2D image data to surface,napari_stl_exporter._image_to_surface:image_to_surface_widget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-stl-exporter.extrude,Extrude mesh,napari_stl_exporter._image_to_surface:extrude_widget,,,,,,,,,,,,,,,,"['.stl', '.ply', '.obj']",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-stl-exporter.make_landscape_image,LEM,Landscape elevation model -346,napari-stracking,0.1.10,napari-stracking,Linking and tracks analysis,Sylvain Prigent,BSD 3-Clause,https://github.com/sylvainprigent/napari-stracking,62fe5869ed0e6473d0f3d15d,['conda'],,https://github.com/sylvainprigent/napari-stracking,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-stracking,http://api.anaconda.org/packages/conda-forge/napari-stracking,http://anaconda.org/conda-forge/napari-stracking,['0.1.9'],0.1.9,0.1.9,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.9,conda-forge/napari-stracking/0.1.9,1.0,0.0,2022-08-18 15:19:02.502000+00:00,2023-06-18 08:42:20.616000+00:00,conda,noarch/napari-stracking-0.1.9-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'stracking >=0.1.9']",noarch,1660835790324.0,None-any-None,pyhd8ed1ab_0,2022-08-18 15:19:03.235000+00:00,350f37d1be863a0031a90fb948b2df4b,None,21436.0,conda-forge/napari-stracking/0.1.9/noarch/napari-stracking-0.1.9-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-stracking/0.1.9/noarch/napari-stracking-0.1.9-pyhd8ed1ab_0.tar.bz2,conda,0.1.9,conda-forge,['main'],public,,0.2.1,napari-stracking.SParticlesProperties,SParticlesProperties,napari_stracking._sproperties_plugins:SParticlesProperties,,,,2.1,napari-stracking,0.1.10,,Linking and tracks analysis,"# napari-stracking +",text/markdown,https://github.com/jo-mueller/napari-stl-exporter.git,Johannes Soltwedel,johannes_richard.soltwedel@tu-dresden.de,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari', 'scikit-image', 'vedo (>=2023.4.6)', 'npe2', 'numpy']",>=3.7,"['Project Site, https://github.com/jo-mueller/napari-stl-exporter', 'Report Issues, https://github.com/jo-mueller/napari-stl-exporter/issues', 'Documentation, https://pypi.org/project/napari-stl-exporter/', 'User Support, https://github.com/jo-mueller/napari-stl-exporter/issues', 'Twitter, https://twitter.com/jm_mightypirate']",,False,0.0.6,conda-forge/napari-stl-exporter/0.0.6,0.0.10,conda-forge/napari-stl-exporter/0.0.10,0.0.11,conda-forge/napari-stl-exporter/0.0.11,conda,noarch/napari-stl-exporter-0.0.6-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'numpy-stl', 'python >=3.7', 'scikit-image', 'vedo']",pyhd8ed1ab_0,1649947386817.0,None-any-None,noarch,2022-04-14 14:45:55.559000+00:00,4ccacb90f38ebae1f432f3ebb3f7e3a6,None,10163.0,conda-forge/napari-stl-exporter/0.0.6/noarch/napari-stl-exporter-0.0.6-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-stl-exporter/0.0.6/noarch/napari-stl-exporter-0.0.6-pyhd8ed1ab_0.tar.bz2,conda,0.0.6,conda-forge,['main'],conda,noarch/napari-stl-exporter-0.0.10-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'npe2', 'numpy', 'python >=3.7', 'scikit-image', 'vedo']",noarch,1654704172788.0,None-any-None,pyhd8ed1ab_0,2022-06-08 16:06:14.656000+00:00,75bf9420efac77ca50449a9164bb53d3,None,11272.0,conda-forge/napari-stl-exporter/0.0.10/noarch/napari-stl-exporter-0.0.10-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-stl-exporter/0.0.10/noarch/napari-stl-exporter-0.0.10-pyhd8ed1ab_0.tar.bz2,conda,0.0.10,conda-forge,['main'],conda,noarch/napari-stl-exporter-0.0.11-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'napari-plugin-engine >=0.1.4', 'npe2', 'numpy', 'python >=3.7', 'scikit-image', 'vedo']",BSD-3-Clause,python,1662430779603.0,2022-09-06 02:22:48.712000+00:00,4c2c525483afbf29a1624c5798c02837,None,269687.0,conda-forge/napari-stl-exporter/0.0.11/noarch/napari-stl-exporter-0.0.11-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-stl-exporter/0.0.11/noarch/napari-stl-exporter-0.0.11-pyhd8ed1ab_0.tar.bz2,conda,0.0.11,conda-forge,['main'],,napari-stl-exporter.write_surface,Write Surface,napari_stl_exporter._writer:napari_write_surfaces,napari-stl-exporter.make_pyramid_label,Create a label image of a pyramid,napari_stl_exporter._sample_data:make_pyramid_label,napari-stl-exporter.make_pyramid_surface,Create a surface image of a pyramid,napari_stl_exporter._sample_data:make_pyramid_surface,napari-stl-exporter.convert_image_to_surface,2D Image to surface,False,napari-stl-exporter.extrude,Extrude mesh,False,,,,,,,napari-stl-exporter.import_surface,Read surface data from supported file types,napari_stl_exporter._reader:get_reader,napari-stl-exporter.write_labels,['labels'],labels,napari-stl-exporter.write_surface,['surface'],"['.stl', '.ply', '.obj']",surface,napari-stl-exporter.make_pyramid_label,PLL,Pyramid label image,0.1.4,conda-forge/napari-stl-exporter/0.1.4,0.1.5,conda-forge/napari-stl-exporter/0.1.5,,,conda,noarch/napari-stl-exporter-0.1.4-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'npe2', 'numpy', 'python >=3.7', 'scikit-image', 'vedo']",noarch,1682248332597.0,None-any-None,pyhd8ed1ab_0,2023-04-23 11:14:58.977000+00:00,9046f57ea4ed5ee8b9ba080df7676fed,ab7a098cc6af8f227cf2d508264b882d31f27a1276083b8cc986491a1850fe03,218849.0,conda-forge/napari-stl-exporter/0.1.4/noarch/napari-stl-exporter-0.1.4-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-stl-exporter/0.1.4/noarch/napari-stl-exporter-0.1.4-pyhd8ed1ab_0.conda,conda,0.1.4,conda-forge,['main'],conda,noarch/napari-stl-exporter-0.1.5-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'napari-plugin-engine >=0.1.4', 'npe2', 'numpy', 'python >=3.7', 'scikit-image', 'vedo >=2023.4.6']",noarch,1690324268711.0,None-any-None,pyhd8ed1ab_0,2023-07-25 22:34:22.687000+00:00,151f616eae9903c7bd121dec5c4a2112,3173cba4047589440968a09f72ff8f5d916aab835ec8ae02c26e2fa9a2dea541,224216.0,conda-forge/napari-stl-exporter/0.1.5/noarch/napari-stl-exporter-0.1.5-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-stl-exporter/0.1.5/noarch/napari-stl-exporter-0.1.5-pyhd8ed1ab_0.conda,conda,0.1.5,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,napari-stl-exporter.make_pyramid_surface,PSL,Pyramid surface,napari-stl-exporter.convert_image_to_surface,Convert 2D image data to surface,napari_stl_exporter._image_to_surface:image_to_surface_widget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-stl-exporter.extrude,Extrude mesh,napari_stl_exporter._image_to_surface:extrude_widget,,,,,,,,,,,,,"['.stl', '.ply', '.obj']",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-stl-exporter.make_landscape_image,LEM,Landscape elevation model +364,napari-stracking,0.1.10,napari-stracking,Linking and tracks analysis,Sylvain Prigent,BSD 3-Clause,https://github.com/sylvainprigent/napari-stracking,62fe5869ed0e6473d0f3d15d,['conda'],,https://github.com/sylvainprigent/napari-stracking,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-stracking,http://api.anaconda.org/packages/conda-forge/napari-stracking,http://anaconda.org/conda-forge/napari-stracking,['0.1.9'],0.1.9,0.1.9,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.9,conda-forge/napari-stracking/0.1.9,1.0,0.0,2022-08-18 15:19:02.502000+00:00,2023-06-18 08:42:20.616000+00:00,conda,noarch/napari-stracking-0.1.9-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'stracking >=0.1.9']",noarch,1660835790324.0,None-any-None,pyhd8ed1ab_0,2022-08-18 15:19:03.235000+00:00,350f37d1be863a0031a90fb948b2df4b,None,21436.0,conda-forge/napari-stracking/0.1.9/noarch/napari-stracking-0.1.9-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-stracking/0.1.9/noarch/napari-stracking-0.1.9-pyhd8ed1ab_0.tar.bz2,conda,0.1.9,conda-forge,['main'],public,,0.2.1,napari-stracking.SParticlesProperties,SParticlesProperties,napari_stracking._sproperties_plugins:SParticlesProperties,,,,2.1,napari-stracking,0.1.10,,Linking and tracks analysis,"# napari-stracking [![License](https://img.shields.io/pypi/l/napari-stracking.svg?color=green)](https://github.com/sylvainprigent/napari-stracking/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-stracking.svg?color=green)](https://pypi.org/project/napari-stracking) @@ -36311,8 +38097,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/sylvainprigent/napari-stracking,Sylvain Prigent,sylvain.prigent@inria.fr,BSD 3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'stracking >=0.1.10']",>=3.8,"['Bug Tracker, https://github.com/sylvainprigent/napari-stracking/issues', 'Documentation, https://github.com/sylvainprigent/napari-stracking#README.md', 'Source Code, https://github.com/sylvainprigent/napari-stracking', 'User Support, https://github.com/sylvainprigent/napari-stracking/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-stracking.SDetectorDog,SDetectorDog,napari_stracking._sdetection_plugins:SDetectorDog,napari-stracking.SDetectorDoh,SDetectorDoh,napari_stracking._sdetection_plugins:SDetectorDoh,napari-stracking.SDetectorLog,SDetectorLog,napari_stracking._sdetection_plugins:SDetectorLog,napari-stracking.SParticlesProperties,SParticlesProperties,False,napari-stracking.SDetectorDog,SDetectorDog,False,napari-stracking.SDetectorDoh,SDetectorDoh,False,napari-stracking.SDetectorLog,SDetectorLog,False,napari-stracking.SDetectorSeg,SDetectorSeg,napari_stracking._sdetection_plugins:SDetectorSeg,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-stracking.STracksFeatures,STracksFeatures,napari_stracking._sfeatures_plugins:STracksFeatures,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-stracking.SLinkerShortestPath,SLinkerShortestPath,napari_stracking._slinking_plugins:SLinkerShortestPath,napari-stracking.SFilterTrack,SFilterTrack,napari_stracking._strackfilter_plugins:SFilterTrack,napari-stracking.SScale,SScale,napari_stracking._scale_plugin:SScale,napari-stracking.SLoad,SLoad,napari_stracking._reader_plugin:SLoad,napari-stracking.SExport,SExport,napari_stracking._export_plugin:SExport,napari-stracking.SPipeline,SPipeline,napari_stracking._pipeline_plugin:SPipeline,,napari-stracking.SDetectorSeg,SDetectorSeg,False,napari-stracking.STracksFeatures,STracksFeatures,False,napari-stracking.SLinkerShortestPath,SLinkerShortestPath,False,napari-stracking.SFilterTrack,SFilterTrack,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -347,napari-subboxer,0.0.1,napari-subboxer,A napari plugin for interacting with electron cryotomograms,Alister Burt,BSD-3-Clause,https://github.com/alisterburt/napari-subboxer,61fa7d2dde19da3f496439cb,['conda'],,https://github.com/alisterburt/napari-subboxer,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-subboxer,http://api.anaconda.org/packages/conda-forge/napari-subboxer,http://anaconda.org/conda-forge/napari-subboxer,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-subboxer/0.0.1,1.0,0.0,2022-02-02 12:46:34.824000+00:00,2023-06-18 08:40:41.135000+00:00,conda,noarch/napari-subboxer-0.0.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['einops', 'eulerangles', 'mrcfile', 'napari 0.4.12', 'napari-plugin-engine >=0.1.4', 'numpy', 'pydantic', 'python >=3.7', 'starfile', 'typer']",noarch,1643805843106.0,None-any-None,pyhd8ed1ab_0,2022-02-02 12:46:35.256000+00:00,fca7cdd3d00f4f16b2653e8a1b317790,None,21728.0,conda-forge/napari-subboxer/0.0.1/noarch/napari-subboxer-0.0.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-subboxer/0.0.1/noarch/napari-subboxer-0.0.1-pyhd8ed1ab_0.tar.bz2,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-subboxer.SubboxingWidget,SubboxingWidget,napari_subboxer._qt.subboxing_widget:SubboxingWidget,,,,2.1,napari-subboxer,0.0.1,['UNKNOWN'],A napari plugin for interacting with electron cryotomograms,"# napari-subboxer +",text/markdown,https://github.com/sylvainprigent/napari-stracking,Sylvain Prigent,sylvain.prigent@inria.fr,BSD 3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'stracking >=0.1.10']",>=3.8,"['Bug Tracker, https://github.com/sylvainprigent/napari-stracking/issues', 'Documentation, https://github.com/sylvainprigent/napari-stracking#README.md', 'Source Code, https://github.com/sylvainprigent/napari-stracking', 'User Support, https://github.com/sylvainprigent/napari-stracking/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-stracking.SDetectorDog,SDetectorDog,napari_stracking._sdetection_plugins:SDetectorDog,napari-stracking.SDetectorDoh,SDetectorDoh,napari_stracking._sdetection_plugins:SDetectorDoh,napari-stracking.SDetectorLog,SDetectorLog,napari_stracking._sdetection_plugins:SDetectorLog,napari-stracking.SParticlesProperties,SParticlesProperties,False,napari-stracking.SDetectorDog,SDetectorDog,False,napari-stracking.SDetectorDoh,SDetectorDoh,False,napari-stracking.SDetectorLog,SDetectorLog,False,napari-stracking.SDetectorSeg,SDetectorSeg,napari_stracking._sdetection_plugins:SDetectorSeg,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-stracking.STracksFeatures,STracksFeatures,napari_stracking._sfeatures_plugins:STracksFeatures,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-stracking.SLinkerShortestPath,SLinkerShortestPath,napari_stracking._slinking_plugins:SLinkerShortestPath,napari-stracking.SFilterTrack,SFilterTrack,napari_stracking._strackfilter_plugins:SFilterTrack,napari-stracking.SScale,SScale,napari_stracking._scale_plugin:SScale,napari-stracking.SLoad,SLoad,napari_stracking._reader_plugin:SLoad,napari-stracking.SExport,SExport,napari_stracking._export_plugin:SExport,,napari-stracking.SDetectorSeg,SDetectorSeg,False,napari-stracking.STracksFeatures,STracksFeatures,False,napari-stracking.SLinkerShortestPath,SLinkerShortestPath,False,napari-stracking.SFilterTrack,SFilterTrack,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +365,napari-subboxer,0.0.1,napari-subboxer,A napari plugin for interacting with electron cryotomograms,Alister Burt,BSD-3-Clause,https://github.com/alisterburt/napari-subboxer,61fa7d2dde19da3f496439cb,['conda'],,https://github.com/alisterburt/napari-subboxer,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-subboxer,http://api.anaconda.org/packages/conda-forge/napari-subboxer,http://anaconda.org/conda-forge/napari-subboxer,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-subboxer/0.0.1,1.0,0.0,2022-02-02 12:46:34.824000+00:00,2023-06-18 08:40:41.135000+00:00,conda,noarch/napari-subboxer-0.0.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['einops', 'eulerangles', 'mrcfile', 'napari 0.4.12', 'napari-plugin-engine >=0.1.4', 'numpy', 'pydantic', 'python >=3.7', 'starfile', 'typer']",noarch,1643805843106.0,None-any-None,pyhd8ed1ab_0,2022-02-02 12:46:35.256000+00:00,fca7cdd3d00f4f16b2653e8a1b317790,None,21728.0,conda-forge/napari-subboxer/0.0.1/noarch/napari-subboxer-0.0.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-subboxer/0.0.1/noarch/napari-subboxer-0.0.1-pyhd8ed1ab_0.tar.bz2,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-subboxer.SubboxingWidget,SubboxingWidget,napari_subboxer._qt.subboxing_widget:SubboxingWidget,,,,2.1,napari-subboxer,0.0.1,['UNKNOWN'],A napari plugin for interacting with electron cryotomograms,"# napari-subboxer [![License](https://img.shields.io/pypi/l/napari-subboxer.svg?color=green)](https://github.com/alisterburt/napari-subboxer/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-subboxer.svg?color=green)](https://pypi.org/project/napari-subboxer) @@ -36387,8 +38173,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/alisterburt/napari-subboxer,Alister Burt,alisterburt@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari[pyqt5] (==0.4.12)', 'mrcfile', 'typer', 'eulerangles', 'starfile', 'einops', 'pydantic']",>=3.7,"['Bug Tracker, https://github.com/alisterburt/napari-subboxer/issues', 'Documentation, https://github.com/alisterburt/napari-subboxer#README.md', 'Source Code, https://github.com/alisterburt/napari-subboxer', 'User Support, https://github.com/alisterburt/napari-subboxer/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-subboxer.SubboxingWidget,SubboxingWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -348,napari-superres,0.1.1,superres,Fluorescence Fluctuation-based Super Resolution (FF-SRM) Methods,"""Rocco D'Antuono, Adán Guerrero, Raúl Pinto Cámara, Paúl Hernández Herrera, Esley Torres Garcia, Haydee Hernández, Julián Mejía""",BSD-3-Clause,https://github.com/RoccoDAnt/napari-superres,65742396a35658e693a5db3c,['conda'],,https://pypi.org/project/napari-superres,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-superres,http://api.anaconda.org/packages/conda-forge/napari-superres,http://anaconda.org/conda-forge/napari-superres,['0.1.1'],0.1.1,0.1.1,['noarch'],3.0,https://github.com/RoccoDAnt/napari-superres,['pyh9208f05_0'],0.1.1,conda-forge/napari-superres/0.1.1,1.0,0.0,2023-12-09 08:21:40.287000+00:00,2023-12-09 08:21:43.039000+00:00,conda,noarch/napari-superres-0.1.1-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numba', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image', 'scipy', 'vispy']",noarch,1702109967720.0,None-any-None,pyh9208f05_0,2023-12-09 08:21:40.691000+00:00,90b28eacac99b4d2095c42b805506552,7142961c340b780b01c2ba5d6e8361a3886854bdafd371de47725c996c51486e,42002.0,conda-forge/napari-superres/0.1.1/noarch/napari-superres-0.1.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-superres/0.1.1/noarch/napari-superres-0.1.1-pyh9208f05_0.conda,conda,0.1.1,conda-forge,['main'],public,,0.2.1,napari-superres.get_reader,Open data with superres,napari_superres._reader:napari_get_reader,napari-superres.get_reader,['*.npy'],False,2.1,napari-superres,0.1.1,,Fluorescence Fluctuation-based Super Resolution (FF-SRM) Methods,"# napari-superres +",text/markdown,https://github.com/alisterburt/napari-subboxer,Alister Burt,alisterburt@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari[pyqt5] (==0.4.12)', 'mrcfile', 'typer', 'eulerangles', 'starfile', 'einops', 'pydantic']",>=3.7,"['Bug Tracker, https://github.com/alisterburt/napari-subboxer/issues', 'Documentation, https://github.com/alisterburt/napari-subboxer#README.md', 'Source Code, https://github.com/alisterburt/napari-subboxer', 'User Support, https://github.com/alisterburt/napari-subboxer/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-subboxer.SubboxingWidget,SubboxingWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +366,napari-superres,0.1.1,superres,Fluorescence Fluctuation-based Super Resolution (FF-SRM) Methods,"""Rocco D'Antuono, Adán Guerrero, Raúl Pinto Cámara, Paúl Hernández Herrera, Esley Torres Garcia, Haydee Hernández, Julián Mejía""",BSD-3-Clause,https://github.com/RoccoDAnt/napari-superres,65742396a35658e693a5db3c,['conda'],,https://pypi.org/project/napari-superres,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-superres,http://api.anaconda.org/packages/conda-forge/napari-superres,http://anaconda.org/conda-forge/napari-superres,['0.1.1'],0.1.1,0.1.1,['noarch'],3.0,https://github.com/RoccoDAnt/napari-superres,['pyh9208f05_0'],0.1.1,conda-forge/napari-superres/0.1.1,1.0,0.0,2023-12-09 08:21:40.287000+00:00,2023-12-09 08:21:43.039000+00:00,conda,noarch/napari-superres-0.1.1-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'matplotlib-base', 'napari', 'numba', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image', 'scipy', 'vispy']",noarch,1702109967720.0,None-any-None,pyh9208f05_0,2023-12-09 08:21:40.691000+00:00,90b28eacac99b4d2095c42b805506552,7142961c340b780b01c2ba5d6e8361a3886854bdafd371de47725c996c51486e,42002.0,conda-forge/napari-superres/0.1.1/noarch/napari-superres-0.1.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-superres/0.1.1/noarch/napari-superres-0.1.1-pyh9208f05_0.conda,conda,0.1.1,conda-forge,['main'],public,,0.2.1,napari-superres.get_reader,Open data with superres,napari_superres._reader:napari_get_reader,napari-superres.get_reader,['*.npy'],False,2.1,napari-superres,0.1.1,,Fluorescence Fluctuation-based Super Resolution (FF-SRM) Methods,"# napari-superres [![License BSD-3](https://img.shields.io/pypi/l/napari-superres.svg?color=green)](https://github.com/RoccoDAnt/napari-superres/blob/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-superres.svg?color=green)](https://pypi.org/project/napari-superres) @@ -36532,138 +38318,9 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/RoccoDAnt/napari-superres,"""Rocco D'Antuono, Adán Guerrero, Raúl Pinto Cámara, Paúl Hernández Herrera, Esley Torres Garcia, Haydee Hernández, Julián Mejía""",rocco.dantuono@hotmail.it,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['matplotlib', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/RoccoDAnt/napari-superres/issues', 'Documentation, https://github.com/RoccoDAnt/napari-superres#README.md', 'Source Code, https://github.com/RoccoDAnt/napari-superres', 'User Support, https://github.com/RoccoDAnt/napari-superres/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-superres.write_multiple,Save multi-layer data with superres,napari_superres._writer:write_multiple,napari-superres.write_single_image,Save image data with superres,napari_superres._writer:write_single_image,napari-superres.make_mssr_caller,Make MSSR plugin GUI,napari_superres._gui_creator:mssr_caller,napari-superres.make_mssr_caller,MSSR,False,napari-superres.make_esi_caller,ESI,False,napari-superres.make_sofi_caller,SOFI,False,napari-superres.make_srrf_caller,SRRF,False,napari-superres.make_esi_caller,Make ESI plugin GUI,napari_superres._gui_creator:esi_caller,napari-superres.write_multiple,"['image*', 'labels*']",,napari-superres.write_single_image,['image'],['.npy'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-superres.make_sofi_caller,Make SOFI plugin GUI,napari_superres._gui_creator:sofi_caller,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-superres.make_srrf_caller,Make SRRF plugin GUI,napari_superres._gui_creator:srrf_caller,napari-superres.make_musical_caller,Make MUSICAL plugin GUI,napari_superres._gui_creator:musical_caller,napari-superres.make_SplitChannel,Make Split Channel plugin,napari_superres._gui_creator:SplitChannelsWidget,,,,,,,,,,,napari-superres.make_musical_caller,MUSICAL,False,napari-superres.make_SplitChannel,Split Channels,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -349,napari-svetlana,1.0.1,napari-svetlana,A classification plugin for the ROIs of a segmentation mask.,Clément Cazorla,GPL-3.0-only,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.0,napari-svetlana.Annotation,Create Annotation,napari_svetlana._batch_dock_widget:Annotation,napari-svetlana.get_reader,['*.npy'],True,2.1,napari_svetlana,1.0.1,,A classification plugin for the ROIs of a segmentation mask.," # napari_svetlana - -[![License](https://img.shields.io/pypi/l/napari_svetlana.svg?color=green)](https://bitbucket.org/koopa31/napari_svetlana/src/main/LICENSE) -[![PyPI](https://img.shields.io/pypi/v/napari_svetlana.svg?color=green)](https://pypi.org/project/napari_svetlana) -[![Python Version](https://img.shields.io/pypi/pyversions/napari_svetlana.svg?color=green)](https://python.org) -[![tests](https://bitbucket.org/koopa31/napari_svetlana/workflows/tests/badge.svg)](https://bitbucket.org/koopa31/napari_svetlana/actions) -[![codecov](https://codecov.io/gh/koopa31/napari_svetlana/branch/main/graph/badge.svg)](https://codecov.io/gh/koopa31/napari_svetlana) -[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-svetlana)](https://napari-hub.org/plugins/napari-svetlana) -[![Documentation](https://readthedocs.org/projects/svetlana-documentation/badge/?version=latest)](https://svetlana-documentation.readthedocs.io/en/latest/) - -The aim of this plugin is to classify the output of a segmentation algorithm. -The inputs are : -
    -
  • A folder of raw images
    • -
  • Their segmentation masks where each ROI has its own label.
    • -
- -Svetlana can process 2D, 3D and multichannel image. If you want to use it to work on cell images, we strongly -recommend the use of [Cellpose](https://www.cellpose.org) for the segmentation part, as it provides excellent quality results and a standard output format -accepted by Svetlana (labels masks). - -If you use this plugin please cite the [paper](https://www.nature.com/articles/s41598-024-60916-8): - -Cazorla, C., Weiss, P., & Morin, R. (2024). Svetlana: a Supervised Segmentation Classifier for Napari. - -```bibtex -@article{cazorla2024svetlana, - title={Svetlana a supervised segmentation classifier for Napari}, - author={Cazorla, Cl{\'e}ment and Morin, Renaud and Weiss, Pierre}, - journal={Scientific Reports}, - volume={14}, - number={1}, - pages={11604}, - year={2024}, - publisher={Nature Publishing Group UK London} -} - -``` - - -![](https://bitbucket.org/koopa31/napari_svetlana/raw/bca8788111b38d97bd172c7caac87cc488ace699/images/Videogif.gif) - - ----------------------------------- - -This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template. - - - -## Installation - -First install Napari in a Python 3.9 Conda environment following these instructions : - -```bash -conda create -n svetlana_env python=3.9 -conda activate svetlana_env -conda install pip -python -m pip install ""napari[all]""==0.4.17 -``` - -Then, you can install `napari_svetlana` via [pip](https://pypi.org/project/napari-svetlana/), or directly from the Napari plugin manager (see Napari documentation): -```bash -pip install napari_svetlana -``` -WARNING: - -If you have a Cuda compatible GPU on your computer, some computations may be accelerated -using [Cupy](https://pypi.org/project/cupy/). Unfortunately, Cupy needs Cudatoolkit to be installed. This library can only be installed via -Conda while the plugin is a pip plugin, so it must be installed manually for the moment: -```bash -conda install cudatoolkit=10.2 -``` -Also note that the library ([Cucim](https://pypi.org/project/cucim/)) that we use to improve these performances, computing morphological operations on GPU -is unfortunately only available for Linux systems. Hence, if you are a Windows user, this installation is not necessary. - -## Tutorial - -Many advanced features are available in Svetlana, such as data augmentation or contextual information reduction, to optimize the performance of your classifier. Thus, we strongly encourage you to -check our [Youtube tutorial](https://www.youtube.com/watch?v=u_FKuHta-RE) and -our [documentation](https://svetlana-documentation.readthedocs.io/en/latest/). -A button called **TRY ON DEMO IMAGE** is available in the annotation plugin and enables you to apply the YouTube -tutorial to the same test images to learn how to use the plugin. Feel free to try it to test all the features -that Svetlana offers. - -## Similar Napari plugins - -Joel Luethi developed a similar method for objects classification called [napari feature classifier](https://www.napari-hub.org/plugins/napari-feature-classifier). -Also, [apoc](https://www.napari-hub.org/plugins/napari-accelerated-pixel-and-object-classification) by Robert Haase is available in Napari for pixels and objects classification. - -## Contributing - -Contributions are very welcome. - -## License - -Distributed under the terms of the [BSD-3] license, -""napari_svetlana"" is free and open source software - -## Acknowledgements - -The method was developed by [Clément Cazorla](https://koopa31.github.io/), [Renaud Morin](https://www.linkedin.com/in/renaud-morin-6a42665b/?originalSubdomain=fr) and [Pierre Weiss](https://www.math.univ-toulouse.fr/~weiss/). And the plugin was written by -Clément Cazorla. The project is co-funded by [Imactiv-3D](https://www.imactiv-3d.com/) and [CNRS](https://www.cnrs.fr/fr). - -## Issues - -If you encounter any problems, please [file an issue](https://bitbucket.org/koopa31/napari_svetlana/issues?status=new&status=open) along with a detailed description. - -[napari]: https://github.com/napari/napari -[Cookiecutter]: https://github.com/audreyr/cookiecutter -[@napari]: https://github.com/napari -[MIT]: http://opensource.org/licenses/MIT -[BSD-3]: http://opensource.org/licenses/BSD-3-Clause -[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt -[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt -[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0 -[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt -[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin - -[napari]: https://github.com/napari/napari -[tox]: https://tox.readthedocs.io/en/latest/ -[pip]: https://pypi.org/project/pip/ -[PyPI]: https://pypi.org/ -",text/markdown,,Clément Cazorla,clement.cazorla31@gmail.com,GPL-3.0-only,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']","['napari-plugin-engine >=0.1.4', 'numpy', 'albumentations ==1.0.3', 'joblib ==1.2.0', 'light-the-torch', 'matplotlib', 'opencv-python ==4.8.1.78', 'PyQt5', 'cupy-cuda102 ==10.6.0', 'xlsxwriter', 'pandas', 'npe2', 'pooch', 'cucim ==22.6.0 ; platform_system == ""Linux""']",>=3.9,"['Bug Tracker, https://bitbucket.org/koopa31/napari_svetlana/issues?status=new&status=open', 'Documentation, https://svetlana-documentation.readthedocs.io/en/latest/', 'Source Code, https://bitbucket.org/koopa31/napari_svetlana/src/main/', 'User Support, https://bitbucket.org/koopa31/napari_svetlana/issues?status=new&status=open']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-svetlana.Training,Create Training,napari_svetlana._batch_dock_widget:Training,napari-svetlana.Prediction,Create Prediction,napari_svetlana._batch_dock_widget:Prediction,napari-svetlana.get_reader,Get Reader,napari_svetlana._reader:napari_get_reader,napari-svetlana.Annotation,Annotation,False,napari-svetlana.Training,Training,False,napari-svetlana.Prediction,Prediction,False,,,,napari-svetlana.write_image,Write Image,napari_svetlana._writer:napari_write_image,napari-svetlana.write_image,['image'],image,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -350,napari-svg,0.2.0,napari SVG,A plugin for writing svg files with napari,,BSD-3,,5eb7ad62fe6b2a01a14f9347,['conda'],"An io plugin for reading and writing svg files with napari -",https://github.com/napari/napari-svg,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-svg,http://api.anaconda.org/packages/conda-forge/napari-svg,http://anaconda.org/conda-forge/napari-svg,"['0.1.2', '0.1.3', '0.1.4', '0.1.5', '0.1.6', '0.1.7', '0.1.10', '0.2.0']",0.2.0,0.2.0,['noarch'],17.0,https://github.com/napari/napari-svg,"['py_0', 'pyhd8ed1ab_0', 'pyhd8ed1ab_1']",0.1.2,conda-forge/napari-svg/0.1.2,1.0,0.0,2020-06-03 11:59:39.030000+00:00,2024-06-25 08:24:53.755000+00:00,conda,noarch/napari-svg-0.1.2-py_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['imageio', 'napari-plugin-engine', 'numpy', 'python >=3.6', 'vispy']",noarch,1589095741096.0,None-any-None,py_0,2020-05-10 07:29:41.852000+00:00,024f1db6678f350033c694f43e46e422,None,13714.0,conda-forge/napari-svg/0.1.2/noarch/napari-svg-0.1.2-py_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-svg/0.1.2/noarch/napari-svg-0.1.2-py_0.tar.bz2,conda,0.1.2,conda-forge,['main'],public,,0.2.1,napari-svg.svg_writer,Write SVG,napari_svg.hook_implementations:writer,,,,2.1,napari-svg,0.2.0,,A plugin for writing svg files with napari,"# napari-svg +",text/markdown,https://github.com/RoccoDAnt/napari-superres,"""Rocco D'Antuono, Adán Guerrero, Raúl Pinto Cámara, Paúl Hernández Herrera, Esley Torres Garcia, Haydee Hernández, Julián Mejía""",rocco.dantuono@hotmail.it,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['matplotlib', 'magicgui', 'qtpy', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.8,"['Bug Tracker, https://github.com/RoccoDAnt/napari-superres/issues', 'Documentation, https://github.com/RoccoDAnt/napari-superres#README.md', 'Source Code, https://github.com/RoccoDAnt/napari-superres', 'User Support, https://github.com/RoccoDAnt/napari-superres/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-superres.write_multiple,Save multi-layer data with superres,napari_superres._writer:write_multiple,napari-superres.write_single_image,Save image data with superres,napari_superres._writer:write_single_image,napari-superres.make_mssr_caller,Make MSSR plugin GUI,napari_superres._gui_creator:mssr_caller,napari-superres.make_mssr_caller,MSSR,False,napari-superres.make_esi_caller,ESI,False,napari-superres.make_sofi_caller,SOFI,False,napari-superres.make_srrf_caller,SRRF,False,napari-superres.make_esi_caller,Make ESI plugin GUI,napari_superres._gui_creator:esi_caller,napari-superres.write_multiple,"['image*', 'labels*']",,napari-superres.write_single_image,['image'],['.npy'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-superres.make_sofi_caller,Make SOFI plugin GUI,napari_superres._gui_creator:sofi_caller,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-superres.make_srrf_caller,Make SRRF plugin GUI,napari_superres._gui_creator:srrf_caller,napari-superres.make_musical_caller,Make MUSICAL plugin GUI,napari_superres._gui_creator:musical_caller,napari-superres.make_SplitChannel,Make Split Channel plugin,napari_superres._gui_creator:SplitChannelsWidget,,,,,,,,napari-superres.make_musical_caller,MUSICAL,False,napari-superres.make_SplitChannel,Split Channels,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +367,napari-svg,0.2.0,napari SVG,A plugin for writing svg files with napari,,BSD-3,,5eb7ad62fe6b2a01a14f9347,['conda'],"An io plugin for reading and writing svg files with napari +",https://github.com/napari/napari-svg,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-svg,http://api.anaconda.org/packages/conda-forge/napari-svg,http://anaconda.org/conda-forge/napari-svg,"['0.1.2', '0.1.3', '0.1.4', '0.1.5', '0.1.6', '0.1.7', '0.1.10', '0.2.0']",0.2.0,0.2.0,['noarch'],21.0,https://github.com/napari/napari-svg,"['py_0', 'pyha07c04f_1', 'pyhd8ed1ab_0', 'pyhd8ed1ab_1']",0.1.2,conda-forge/napari-svg/0.1.2,1.0,0.0,2020-06-03 11:59:39.030000+00:00,2024-12-13 08:29:41.172000+00:00,conda,noarch/napari-svg-0.1.2-py_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['imageio', 'napari-plugin-engine', 'numpy', 'python >=3.6', 'vispy']",noarch,1589095741096.0,None-any-None,py_0,2020-05-10 07:29:41.852000+00:00,024f1db6678f350033c694f43e46e422,None,13714.0,conda-forge/napari-svg/0.1.2/noarch/napari-svg-0.1.2-py_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-svg/0.1.2/noarch/napari-svg-0.1.2-py_0.tar.bz2,conda,0.1.2,conda-forge,['main'],public,,0.2.1,napari-svg.svg_writer,Write SVG,napari_svg.hook_implementations:writer,,,,2.1,napari-svg,0.2.0,,A plugin for writing svg files with napari,"# napari-svg [![License](https://img.shields.io/pypi/l/napari-svg.svg?color=green)](https://github.com/napari/napari-svg/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-svg.svg?color=green)](https://pypi.org/project/napari-svg) @@ -36720,8 +38377,140 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,,,"Nicholas Sofroniew , napari core devs ",BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['imageio >=2.5.0', 'numpy >=1.16.0', 'vispy >=0.6.4', ""napari >=0.4 ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.9,"['Source, https://github.com/napari/napari-svg', 'Bug Tracker, https://github.com/napari/napari-svg/issues']",['testing'],False,0.1.3,conda-forge/napari-svg/0.1.3,0.1.4,conda-forge/napari-svg/0.1.4,0.1.5,conda-forge/napari-svg/0.1.5,conda,noarch/napari-svg-0.1.3-py_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['imageio', 'napari-plugin-engine', 'numpy', 'python >=3.6', 'vispy']",py_0,1591185535840.0,None-any-None,noarch,2020-06-03 11:59:39.477000+00:00,5b3533e7a00e3de4a00602b776f10b47,None,13879.0,conda-forge/napari-svg/0.1.3/noarch/napari-svg-0.1.3-py_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-svg/0.1.3/noarch/napari-svg-0.1.3-py_0.tar.bz2,conda,0.1.3,conda-forge,['main'],conda,noarch/napari-svg-0.1.4-py_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['imageio', 'napari-plugin-engine', 'numpy', 'python >=3.6', 'vispy']",noarch,1600323781948.0,None-any-None,py_0,2020-09-17 06:23:43.085000+00:00,1cfbf876e3091d0f63e8f70d4a5ae77e,None,14058.0,conda-forge/napari-svg/0.1.4/noarch/napari-svg-0.1.4-py_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-svg/0.1.4/noarch/napari-svg-0.1.4-py_0.tar.bz2,conda,0.1.4,conda-forge,['main'],conda,noarch/napari-svg-0.1.5-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['imageio', 'napari-plugin-engine', 'numpy', 'python >=3.6', 'vispy']",BSD-3-Clause,python,1620035750560.0,2021-05-03 09:56:37.293000+00:00,08f05468b882d7509d3567efc8e09be0,None,14464.0,conda-forge/napari-svg/0.1.5/noarch/napari-svg-0.1.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-svg/0.1.5/noarch/napari-svg-0.1.5-pyhd8ed1ab_0.tar.bz2,conda,0.1.5,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,napari-svg.svg_writer,"['image*', 'labels*', 'points*', 'shapes*', 'vectors*']",,,,,,,,,0.1.6,conda-forge/napari-svg/0.1.6,0.1.7,conda-forge/napari-svg/0.1.7,0.1.10,conda-forge/napari-svg/0.1.10,conda,noarch/napari-svg-0.1.6-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['imageio >=2.5.0', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy >=1.16.0', 'python >=3.6', 'vispy >=0.6.4']",noarch,1652348099177.0,None-any-None,pyhd8ed1ab_0,2022-05-12 09:37:23.134000+00:00,014e848657f60374f4ec63454bdd7e33,None,15308.0,conda-forge/napari-svg/0.1.6/noarch/napari-svg-0.1.6-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-svg/0.1.6/noarch/napari-svg-0.1.6-pyhd8ed1ab_0.tar.bz2,conda,0.1.6,conda-forge,['main'],conda,noarch/napari-svg-0.1.6-pyhd8ed1ab_1.conda,1.0,BSD-3-Clause,False,python,"['imageio >=2.5.0', 'napari-plugin-engine >=0.1.4', 'numpy >=1.16.0', 'python >=3.6', 'vispy >=0.6.4']",noarch,1672396759219.0,None-any-None,pyhd8ed1ab_1,2022-12-30 10:39:53.404000+00:00,253b66fd502ec988e56ff9ddbd48a0ce,97b58d588614fa6430a2fc409fedb59114332416be5d20559286fd1a2195df9c,16469.0,conda-forge/napari-svg/0.1.6/noarch/napari-svg-0.1.6-pyhd8ed1ab_1.conda,//api.anaconda.org/download/conda-forge/napari-svg/0.1.6/noarch/napari-svg-0.1.6-pyhd8ed1ab_1.conda,conda,0.1.6,conda-forge,['main'],conda,noarch/napari-svg-0.1.7-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['imageio >=2.5.0', 'napari-plugin-engine >=0.1.4', 'numpy >=1.16.0', 'python >=3.7', 'vispy >=0.6.4']",BSD-3-Clause,python,1685065592621.0,2023-05-26 01:47:32.515000+00:00,309ff120cc5a71f977d9e62d27c70787,619201e27d196c0a0b08fd1d140ac7d886a50e9d42761a96df6154a920559697,16802.0,conda-forge/napari-svg/0.1.7/noarch/napari-svg-0.1.7-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-svg/0.1.7/noarch/napari-svg-0.1.7-pyhd8ed1ab_0.conda,conda,0.1.7,conda-forge,['main'],,,,,,,0.2.0,conda-forge/napari-svg/0.2.0,,,conda,noarch/napari-svg-0.1.10-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['imageio >=2.5.0', 'napari-plugin-engine >=0.1.4', 'numpy >=1.16.0', 'python >=3.7', 'vispy >=0.6.4']",noarch,1687848189648.0,None-any-None,pyhd8ed1ab_0,2023-06-27 06:44:10.516000+00:00,5cb1f5326823efd2be39f9ec7b590ca3,770c98c0747a6e04c488fbd8d615a69262ef572288e40a747915e1192377aaa4,17217.0,conda-forge/napari-svg/0.1.10/noarch/napari-svg-0.1.10-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-svg/0.1.10/noarch/napari-svg-0.1.10-pyhd8ed1ab_0.conda,conda,0.1.10,conda-forge,['main'],conda,noarch/napari-svg-0.2.0-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['imageio >=2.5.0', 'numpy >=1.16.0', 'python >=3.9', 'vispy >=0.6.4']",BSD-3-Clause,python,1719303844998.0,2024-06-25 08:24:50.570000+00:00,2f7aba5e755ef65b2c10a9aa11bef91c,dbf1c7456a6faa49ea584327c21221cf8140c7ae6db0a474b74bff7c2b7bb05e,19458.0,conda-forge/napari-svg/0.2.0/noarch/napari-svg-0.2.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-svg/0.2.0/noarch/napari-svg-0.2.0-pyhd8ed1ab_0.conda,conda,0.2.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,['.svg'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -351,napari-tabu,0.1.5,napari-tabu,A plugin for handling multiple napari windows,Robert Haase,BSD-3-Clause,https://github.com/haesleinhuepf/napari-tabu,61fa608f86b0cbb131190492,['conda'],,https://github.com/haesleinhuepf/napari-tabu,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-tabu,http://api.anaconda.org/packages/conda-forge/napari-tabu,http://anaconda.org/conda-forge/napari-tabu,['0.1.5'],0.1.5,0.1.5,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.5,conda-forge/napari-tabu/0.1.5,1.0,0.0,2022-02-02 10:44:27.613000+00:00,2023-06-18 08:40:40.952000+00:00,conda,noarch/napari-tabu-0.1.5-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'python >=3.7']",noarch,1643798498432.0,None-any-None,pyhd8ed1ab_0,2022-02-02 10:44:28.980000+00:00,1ed328645c9d09ea25b96245b77fda6b,None,10096.0,conda-forge/napari-tabu/0.1.5/noarch/napari-tabu-0.1.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-tabu/0.1.5/noarch/napari-tabu-0.1.5-pyhd8ed1ab_0.tar.bz2,conda,0.1.5,conda-forge,['main'],public,,0.2.1,napari-tabu.napari_experimental_provide_function,open_in_new_window,napari_tabu._function:napari_experimental_provide_function,,,,2.1,napari-tabu,0.1.5,['UNKNOWN'],A plugin for handling multiple napari windows,"# napari-tabu +",text/markdown,,,"Nicholas Sofroniew , napari core devs ",BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['imageio >=2.5.0', 'numpy >=1.16.0', 'vispy >=0.6.4', ""napari >=0.4 ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.9,"['Source, https://github.com/napari/napari-svg', 'Bug Tracker, https://github.com/napari/napari-svg/issues']",['testing'],False,0.1.3,conda-forge/napari-svg/0.1.3,0.1.4,conda-forge/napari-svg/0.1.4,0.1.5,conda-forge/napari-svg/0.1.5,conda,noarch/napari-svg-0.1.3-py_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['imageio', 'napari-plugin-engine', 'numpy', 'python >=3.6', 'vispy']",py_0,1591185535840.0,None-any-None,noarch,2020-06-03 11:59:39.477000+00:00,5b3533e7a00e3de4a00602b776f10b47,None,13879.0,conda-forge/napari-svg/0.1.3/noarch/napari-svg-0.1.3-py_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-svg/0.1.3/noarch/napari-svg-0.1.3-py_0.tar.bz2,conda,0.1.3,conda-forge,['main'],conda,noarch/napari-svg-0.1.4-py_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['imageio', 'napari-plugin-engine', 'numpy', 'python >=3.6', 'vispy']",noarch,1600323781948.0,None-any-None,py_0,2020-09-17 06:23:43.085000+00:00,1cfbf876e3091d0f63e8f70d4a5ae77e,None,14058.0,conda-forge/napari-svg/0.1.4/noarch/napari-svg-0.1.4-py_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-svg/0.1.4/noarch/napari-svg-0.1.4-py_0.tar.bz2,conda,0.1.4,conda-forge,['main'],conda,noarch/napari-svg-0.1.5-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['imageio', 'napari-plugin-engine', 'numpy', 'python >=3.6', 'vispy']",BSD-3-Clause,python,1620035750560.0,2021-05-03 09:56:37.293000+00:00,08f05468b882d7509d3567efc8e09be0,None,14464.0,conda-forge/napari-svg/0.1.5/noarch/napari-svg-0.1.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-svg/0.1.5/noarch/napari-svg-0.1.5-pyhd8ed1ab_0.tar.bz2,conda,0.1.5,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,napari-svg.svg_writer,"['image*', 'labels*', 'points*', 'shapes*', 'vectors*']",,,,,,,,,0.1.6,conda-forge/napari-svg/0.1.6,0.1.7,conda-forge/napari-svg/0.1.7,0.1.10,conda-forge/napari-svg/0.1.10,conda,noarch/napari-svg-0.1.6-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['imageio >=2.5.0', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy >=1.16.0', 'python >=3.6', 'vispy >=0.6.4']",noarch,1652348099177.0,None-any-None,pyhd8ed1ab_0,2022-05-12 09:37:23.134000+00:00,014e848657f60374f4ec63454bdd7e33,None,15308.0,conda-forge/napari-svg/0.1.6/noarch/napari-svg-0.1.6-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-svg/0.1.6/noarch/napari-svg-0.1.6-pyhd8ed1ab_0.tar.bz2,conda,0.1.6,conda-forge,['main'],conda,noarch/napari-svg-0.1.6-pyhd8ed1ab_1.conda,1.0,BSD-3-Clause,False,python,"['imageio >=2.5.0', 'napari-plugin-engine >=0.1.4', 'numpy >=1.16.0', 'python >=3.6', 'vispy >=0.6.4']",noarch,1672396759219.0,None-any-None,pyhd8ed1ab_1,2022-12-30 10:39:53.404000+00:00,253b66fd502ec988e56ff9ddbd48a0ce,97b58d588614fa6430a2fc409fedb59114332416be5d20559286fd1a2195df9c,16469.0,conda-forge/napari-svg/0.1.6/noarch/napari-svg-0.1.6-pyhd8ed1ab_1.conda,//api.anaconda.org/download/conda-forge/napari-svg/0.1.6/noarch/napari-svg-0.1.6-pyhd8ed1ab_1.conda,conda,0.1.6,conda-forge,['main'],conda,noarch/napari-svg-0.1.7-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['imageio >=2.5.0', 'napari-plugin-engine >=0.1.4', 'numpy >=1.16.0', 'python >=3.7', 'vispy >=0.6.4']",BSD-3-Clause,python,1685065592621.0,2023-05-26 01:47:32.515000+00:00,309ff120cc5a71f977d9e62d27c70787,619201e27d196c0a0b08fd1d140ac7d886a50e9d42761a96df6154a920559697,16802.0,conda-forge/napari-svg/0.1.7/noarch/napari-svg-0.1.7-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-svg/0.1.7/noarch/napari-svg-0.1.7-pyhd8ed1ab_0.conda,conda,0.1.7,conda-forge,['main'],,,,,,,0.2.0,conda-forge/napari-svg/0.2.0,,,conda,noarch/napari-svg-0.1.10-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['imageio >=2.5.0', 'napari-plugin-engine >=0.1.4', 'numpy >=1.16.0', 'python >=3.7', 'vispy >=0.6.4']",noarch,1687848189648.0,None-any-None,pyhd8ed1ab_0,2023-06-27 06:44:10.516000+00:00,5cb1f5326823efd2be39f9ec7b590ca3,770c98c0747a6e04c488fbd8d615a69262ef572288e40a747915e1192377aaa4,17217.0,conda-forge/napari-svg/0.1.10/noarch/napari-svg-0.1.10-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-svg/0.1.10/noarch/napari-svg-0.1.10-pyhd8ed1ab_0.conda,conda,0.1.10,conda-forge,['main'],conda,noarch/napari-svg-0.2.0-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['imageio >=2.5.0', 'numpy >=1.16.0', 'python >=3.9', 'vispy >=0.6.4']",BSD-3-Clause,python,1719303844998.0,2024-06-25 08:24:50.570000+00:00,2f7aba5e755ef65b2c10a9aa11bef91c,dbf1c7456a6faa49ea584327c21221cf8140c7ae6db0a474b74bff7c2b7bb05e,19458.0,conda-forge/napari-svg/0.2.0/noarch/napari-svg-0.2.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-svg/0.2.0/noarch/napari-svg-0.2.0-pyhd8ed1ab_0.conda,conda,0.2.0,conda-forge,['main'],,,,,,,,,,,,,,,,['.svg'],,,,,,,,,,,,,conda,noarch/napari-svg-0.2.0-pyha07c04f_1.conda,None-any-None,False,noarch,pyha07c04f_1,1.0,"['imageio >=2.5.0', 'numpy >=1.16.0', 'python >=3.9', 'vispy >=0.6.4']",BSD-3-Clause,python,1734078547211.0,2024-12-13 08:29:39.349000+00:00,7709e6123105acb70d110ae15e481a55,d1189bbf4c5c20e52cddc7a3e87c884242aee0137f794d6e2e35b0a981956117,19562.0,conda-forge/napari-svg/0.2.0/noarch/napari-svg-0.2.0-pyha07c04f_1.conda,//api.anaconda.org/download/conda-forge/napari-svg/0.2.0/noarch/napari-svg-0.2.0-pyha07c04f_1.conda,conda,0.2.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +368,napari-swc-reader,0.1.3,napari-swc-reader,A simple napari plugin to load swc file to napari viewer,Clément Caporal," +Copyright (c) 2024, Clément Caporal +All rights reserved. + +Redistribution and use in source and binary forms, with or without +modification, are permitted provided that the following conditions are met: + +* Redistributions of source code must retain the above copyright notice, this + list of conditions and the following disclaimer. + +* Redistributions in binary form must reproduce the above copyright notice, + this list of conditions and the following disclaimer in the documentation + and/or other materials provided with the distribution. + +* Neither the name of copyright holder nor the names of its + contributors may be used to endorse or promote products derived from + this software without specific prior written permission. + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ""AS IS"" +AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE +IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE +DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE +FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL +DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR +SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER +CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, +OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE +OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. +",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-swc-reader.get_reader,Open data with napari-swc-reader,napari_swc_reader._reader:napari_get_reader,napari-swc-reader.get_reader,['*.swc'],False,2.1,napari-swc-reader,0.1.3,,A simple napari plugin to load swc file to napari viewer,"# napari-swc-reader + +[![License BSD-3](https://img.shields.io/pypi/l/napari-swc-reader.svg?color=green)](https://github.com/LaboratoryOpticsBiosciences/napari-swc-reader/raw/main/LICENSE) +[![PyPI](https://img.shields.io/pypi/v/napari-swc-reader.svg?color=green)](https://pypi.org/project/napari-swc-reader) +[![Python Version](https://img.shields.io/pypi/pyversions/napari-swc-reader.svg?color=green)](https://python.org) +[![tests](https://github.com/LaboratoryOpticsBiosciences/napari-swc-reader/workflows/tests/badge.svg)](https://github.com/LaboratoryOpticsBiosciences/napari-swc-reader/actions) +[![codecov](https://codecov.io/gh/LaboratoryOpticsBiosciences/napari-swc-reader/branch/main/graph/badge.svg)](https://codecov.io/gh/LaboratoryOpticsBiosciences/napari-swc-reader) +[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-swc-reader)](https://napari-hub.org/plugins/napari-swc-reader) + +A minimal napari plugin to load swc file to napari viewer. + +![image](https://github.com/user-attachments/assets/1c9e5788-0e74-48ab-be0b-0fb74b35192c) + + +---------------------------------- + +This [napari] plugin was generated with [copier] using the [napari-plugin-template]. + +## Features + +- Load swc file(s) to napari viewer +- Display swc file(s) in napari viewer as points layers and lines layers +- Size of points and lines are using the radius of the swc file +- You can load an example swc from https://neuromorpho.org/dableFiles/jacobs/CNG%20version/204-2-6nj.CNG.swc or load it under `File` -> `Open Sample` -> `napari-swc-reader` + +**Limitations:** +- Only support swc file(s) following specs http://www.neuronland.org/NLMorphologyConverter/MorphologyFormats/SWC/Spec.html 7 columns +- Cannot write swc file(s) to disk but you can access the raw swc data from the napari layers from `metadata` attribute with key `raw_swc` + +**Roadmap:** +- Switch to use `napari.layers.Graph` [when it is available](https://github.com/napari/napari/issues/4274) + +## Installation + +You can install `napari-swc-reader` via [pip]: + + pip install napari-swc-reader + + +To install latest development version : + + pip install git+https://github.com/LaboratoryOpticsBiosciences/napari-swc-reader.git + + +## Contributing + +Contributions are very welcome. Tests can be run with [tox], please ensure +the coverage at least stays the same before you submit a pull request. + +## License + +Distributed under the terms of the [BSD-3] license, +""napari-swc-reader"" is free and open source software + +## Issues + +If you encounter any problems, please [file an issue] along with a detailed description. + +[napari]: https://github.com/napari/napari +[copier]: https://copier.readthedocs.io/en/stable/ +[@napari]: https://github.com/napari +[MIT]: http://opensource.org/licenses/MIT +[BSD-3]: http://opensource.org/licenses/BSD-3-Clause +[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt +[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt +[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0 +[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt +[napari-plugin-template]: https://github.com/napari/napari-plugin-template + +[file an issue]: https://github.com/LaboratoryOpticsBiosciences/napari-swc-reader/issues + +[napari]: https://github.com/napari/napari +[tox]: https://tox.readthedocs.io/en/latest/ +[pip]: https://pypi.org/project/pip/ +[PyPI]: https://pypi.org/ +",text/markdown,,Clément Caporal,caporal.clement@gmail.com," +Copyright (c) 2024, Clément Caporal +All rights reserved. + +Redistribution and use in source and binary forms, with or without +modification, are permitted provided that the following conditions are met: + +* Redistributions of source code must retain the above copyright notice, this + list of conditions and the following disclaimer. + +* Redistributions in binary form must reproduce the above copyright notice, + this list of conditions and the following disclaimer in the documentation + and/or other materials provided with the distribution. + +* Neither the name of copyright holder nor the names of its + contributors may be used to endorse or promote products derived from + this software without specific prior written permission. + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ""AS IS"" +AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE +IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE +DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE +FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL +DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR +SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER +CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, +OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE +OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'pandas', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""']",>=3.9,"['Bug Tracker, https://github.com/LaboratoryOpticsBiosciences/napari-swc-reader/issues', 'Documentation, https://github.com/LaboratoryOpticsBiosciences/napari-swc-reader#README.md', 'Source Code, https://github.com/LaboratoryOpticsBiosciences/napari-swc-reader', 'User Support, https://github.com/LaboratoryOpticsBiosciences/napari-swc-reader/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['IO'],napari-swc-reader.make_sample_data,Load sample data from napari-swc-reader,napari_swc_reader._sample_data:make_sample_data,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-swc-reader.make_sample_data,204-2-6nj.1,napari-swc-reader,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +369,napari-tabu,0.1.5,napari-tabu,A plugin for handling multiple napari windows,Robert Haase,BSD-3-Clause,https://github.com/haesleinhuepf/napari-tabu,61fa608f86b0cbb131190492,['conda'],,https://github.com/haesleinhuepf/napari-tabu,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-tabu,http://api.anaconda.org/packages/conda-forge/napari-tabu,http://anaconda.org/conda-forge/napari-tabu,['0.1.5'],0.1.5,0.1.5,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.5,conda-forge/napari-tabu/0.1.5,1.0,0.0,2022-02-02 10:44:27.613000+00:00,2023-06-18 08:40:40.952000+00:00,conda,noarch/napari-tabu-0.1.5-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'python >=3.7']",noarch,1643798498432.0,None-any-None,pyhd8ed1ab_0,2022-02-02 10:44:28.980000+00:00,1ed328645c9d09ea25b96245b77fda6b,None,10096.0,conda-forge/napari-tabu/0.1.5/noarch/napari-tabu-0.1.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-tabu/0.1.5/noarch/napari-tabu-0.1.5-pyhd8ed1ab_0.tar.bz2,conda,0.1.5,conda-forge,['main'],public,,0.2.1,napari-tabu.napari_experimental_provide_function,open_in_new_window,napari_tabu._function:napari_experimental_provide_function,,,,2.1,napari-tabu,0.1.5,['UNKNOWN'],A plugin for handling multiple napari windows,"# napari-tabu [![License](https://img.shields.io/pypi/l/napari-tabu.svg?color=green)](https://github.com/haesleinhuepf/napari-tabu/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-tabu.svg?color=green)](https://pypi.org/project/napari-tabu) @@ -36786,10 +38575,17 @@ If you encounter any problems, please open a thread on [image.sc](https://image. [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/haesleinhuepf/napari-tabu,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari', 'napari-tools-menu']",>=3.7,"['Bug Tracker, https://github.com/haesleinhuepf/napari-tabu/issues', 'Documentation, https://github.com/haesleinhuepf/napari-tabu#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-tabu', 'User Support, https://github.com/haesleinhuepf/napari-tabu/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-tabu.napari_experimental_provide_function,open_in_new_window,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -352,napari-tapenade-processing,0.0.2,Tapenade Processing,A visual pipeline to process images with Tapenade in Napari,Jules Vanaret,MIT,https://github.com/jules-vanaret/napari-tapenade-processing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-tapenade-processing.tapenade_processing,Tapenade processing widget,napari_tapenade_processing:TapenadeProcessingWidget,,,,2.1,napari-tapenade-processing,0.0.2,,A visual pipeline to process images with Tapenade in Napari,"# :herb: napari-tapenade-processing +",text/markdown,https://github.com/haesleinhuepf/napari-tabu,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari', 'napari-tools-menu']",>=3.7,"['Bug Tracker, https://github.com/haesleinhuepf/napari-tabu/issues', 'Documentation, https://github.com/haesleinhuepf/napari-tabu#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-tabu', 'User Support, https://github.com/haesleinhuepf/napari-tabu/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-tabu.napari_experimental_provide_function,open_in_new_window,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +370,napari-tapenade-processing,0.0.6,Tapenade Processing,A visual pipeline to process images with Tapenade in Napari,Jules Vanaret,MIT,https://github.com/jules-vanaret/napari-tapenade-processing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-tapenade-processing.tapenade_processing,Tapenade processing widget,napari_tapenade_processing:TapenadeProcessingWidget,,,,2.1,napari-tapenade-processing,0.0.6,,A visual pipeline to process images with Tapenade in Napari,"# :herb: napari-tapenade-processing - +[![License MIT](https://img.shields.io/pypi/l/napari-tapenade-processing.svg?color=green)](https://github.com/jules-vanaret/napari-tapenade-processing/raw/main/LICENSE) +[![PyPI](https://img.shields.io/pypi/v/napari-tapenade-processing.svg?color=green)](https://pypi.org/project/napari-tapenade-processing) +[![Python Version](https://img.shields.io/pypi/pyversions/napari-tapenade-processing.svg?color=green)](https://python.org) +[![tests](https://github.com/jules-vanaret/napari-tapenade-processing/workflows/tests/badge.svg)](https://github.com/jules-vanaret/napari-tapenade-processing/actions) +[![codecov](https://codecov.io/gh/jules-vanaret/napari-tapenade-processing/branch/main/graph/badge.svg)](https://codecov.io/gh/jules-vanaret/napari-tapenade-processing) +[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-tapenade-processing)](https://napari-hub.org/plugins/napari-tapenade-processing) + + A collection of methods to process images of deep 3D/3D+time tissues in Napari. @@ -36799,6 +38595,8 @@ If you use this plugin for your research, please [cite us](https://github.com/Gu ## Overview + + While working with large and dense 3D and 3D+time gastruloid datasets, we found that being able to visualise and interact with the data dynamically greatly helped processing it. During the pre-processing stage, dynamical exploration and interaction led to faster tuning of the parameters by allowing direct visual feedback, and gave key biophysical insight during the analysis stage. @@ -36899,12 +38697,12 @@ This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookie [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/jules-vanaret/napari-tapenade-processing,Jules Vanaret,jules.vanaret@univ-amu.fr,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'tifffile', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.8,"['Bug Tracker, https://github.com/jules-vanaret/napari-tapenade-processing/issues', 'Documentation, https://github.com/jules-vanaret/napari-tapenade-processing#README.md', 'Source Code, https://github.com/jules-vanaret/napari-tapenade-processing', 'User Support, https://github.com/jules-vanaret/napari-tapenade-processing/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",,,,,,,,,,napari-tapenade-processing.tapenade_processing,Tapenade Processing,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -353,napari-tardis-em,0.3.1,TARDIS-em napari plugin,Tomogram and micrograph segmentation with TARDIS-em,Robert Kiewisz,MIT,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-tardis-em.import_data,Open segmented point cloud from TARDIS,napari_tardis_em.readers.import_data:napari_get_reader,napari-tardis-em.import_data,"['*.mrc', '*.rec', '*.tif', '*.tiff', '*.nd2', '*.csv']",False,2.1,napari-tardis-em,0.3.1,,Tomogram and micrograph segmentation with TARDIS-em,"# Napari plugin for TARDIS-em +",text/markdown,https://github.com/jules-vanaret/napari-tapenade-processing,Jules Vanaret,jules.vanaret@univ-amu.fr,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'tifffile', 'natsort', 'tapenade>=0.0.13', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.8,"['Bug Tracker, https://github.com/jules-vanaret/napari-tapenade-processing/issues', 'Documentation, https://github.com/jules-vanaret/napari-tapenade-processing#README.md', 'Source Code, https://github.com/jules-vanaret/napari-tapenade-processing', 'User Support, https://github.com/jules-vanaret/napari-tapenade-processing/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",,,,,,,,,,napari-tapenade-processing.tapenade_processing,Tapenade Processing,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +371,napari-tardis-em,0.3.9,TARDIS-em napari plugin,Tomogram and micrograph segmentation with TARDIS-em,Robert Kiewisz,MIT,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-tardis-em.import_data,Open segmented point cloud from TARDIS,napari_tardis_em.readers.import_data:napari_get_reader,napari-tardis-em.import_data,"['*.mrc', '*.rec', '*.tif', '*.tiff', '*.nd2', '*.csv']",False,2.1,napari-tardis-em,0.3.9,,Tomogram and micrograph segmentation with TARDIS-em,"# Napari plugin for TARDIS-em Napari [gen2] plugin for Cry-EM and Cryo-ET micrograph segmentation with TARDIS-em. -",text/markdown,,Robert Kiewisz,rkiewisz@nysbc.org,MIT,"['Development Status :: 5 - Production/Stable', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['setuptools>=70.3.0', 'napari>=0.5.0', 'torch>=2.2.2', 'tardis-em[nd2]==0.3.0', 'numpy>=2.0.0', 'matplotlib>=3.9.1', 'qtpy>=2.4.1', 'pyqt5>=5.15.10', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.10,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-tardis-em.viewer_train,Train TARDIS CNN,napari_tardis_em.viewers.viewer_train:TardisWidget,napari-tardis-em.viewer_predict,Predict TARDIS CNN,napari_tardis_em.viewers.viewer_predict:TardisWidget,napari-tardis-em.viewer_mt_3d,Predict Microtubules 3D,napari_tardis_em.viewers.viewer_mt_3d:TardisWidget,napari-tardis-em.viewer_train,Train TARDIS CNN,False,napari-tardis-em.viewer_predict,Predict TARDIS CNN,False,napari-tardis-em.viewer_mt_3d,Predict Microtubules 3D,False,napari-tardis-em.viewer_mt_tirf,Predict Microtubules TIRF,False,napari-tardis-em.viewer_mt_tirf,Predict Microtubules TIRF,napari_tardis_em.viewers.viewer_mt_tirf:TardisWidget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-tardis-em.viewer_mem_3d,Predict Membrane 3D,napari_tardis_em.viewers.viewer_mem_3d:TardisWidget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-tardis-em.viewer_mem_2d,Predict Microtubules 2D,napari_tardis_em.viewers.viewer_mem_2d:TardisWidget,napari-tardis-em.viewer_actin_3d,Predict Actin 3D,napari_tardis_em.viewers.viewer_actin_3d:TardisWidget,napari-tardis-em.viewer_analysis_fibers,Fiber analysis,napari_tardis_em.viewers.viewer_analysis_fibers:TardisWidget,,,,,,,,,,,napari-tardis-em.viewer_mem_3d,Predict Membrane 3D,False,napari-tardis-em.viewer_mem_2d,Predict Membrane 2D,False,napari-tardis-em.viewer_actin_3d,Predict Actin 3D,False,napari-tardis-em.viewer_analysis_fibers,Fiber analysis,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -354,napari-text-layer,0.1.2,napari-text-layer,Text layer for bio-image annotation.,Hanjin Liu,BSD 3-Clause,UNKNOWN,61f553f79501cf2a1d03b6de,['conda'],,https://pypi.org/project/napari-text-layer/,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-text-layer,http://api.anaconda.org/packages/conda-forge/napari-text-layer,http://anaconda.org/conda-forge/napari-text-layer,['0.1.2'],0.1.2,0.1.2,['noarch'],3.0,https://github.com/hanjinliu/napari-text-layer,['pyhd8ed1ab_0'],0.1.2,conda-forge/napari-text-layer/0.1.2,1.0,0.0,2022-01-29 14:49:25.031000+00:00,2023-06-18 08:40:39.404000+00:00,conda,noarch/napari-text-layer-0.1.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'numpy', 'python >=3.7']",noarch,1643467605959.0,None-any-None,pyhd8ed1ab_0,2022-01-29 14:49:25.730000+00:00,74c326a9a38985c7a6c907b70633de97,None,10226.0,conda-forge/napari-text-layer/0.1.2/noarch/napari-text-layer-0.1.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-text-layer/0.1.2/noarch/napari-text-layer-0.1.2-pyhd8ed1ab_0.tar.bz2,conda,0.1.2,conda-forge,['main'],public,,0.2.1,napari-text-layer.TextLayerOverview,TextLayerOverview,napari_text_layer.textlayer:TextLayerOverview,,,,2.1,napari-text-layer,0.1.2,['UNKNOWN'],Text layer for bio-image annotation.,"# napari-text-layer +",text/markdown,,Robert Kiewisz,rkiewisz@nysbc.org,MIT,"['Development Status :: 5 - Production/Stable', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['setuptools>=70.3.0', 'napari>=0.5.0', 'torch>=2.2.2', 'tardis-em[nd2]>=0.3.9', 'numpy>=2.0.0', 'matplotlib>=3.9.1', 'qtpy>=2.4.1', 'pyqt5>=5.15.10', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.10,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-tardis-em.viewer_train,Train TARDIS CNN,napari_tardis_em.viewers.viewer_train:TardisWidget,napari-tardis-em.viewer_predict,Predict TARDIS CNN,napari_tardis_em.viewers.viewer_predict:TardisWidget,napari-tardis-em.viewer_mt_3d,Predict Microtubules 3D,napari_tardis_em.viewers.viewer_mt_3d:TardisWidget,napari-tardis-em.viewer_train,Train TARDIS CNN,False,napari-tardis-em.viewer_predict,Predict TARDIS CNN,False,napari-tardis-em.viewer_mt_3d,Predict Microtubules 3D,False,napari-tardis-em.viewer_mt_tirf,Predict Microtubules TIRF,False,napari-tardis-em.viewer_mt_tirf,Predict Microtubules TIRF,napari_tardis_em.viewers.viewer_mt_tirf:TardisWidget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-tardis-em.viewer_mem_3d,Predict Membrane 3D,napari_tardis_em.viewers.viewer_mem_3d:TardisWidget,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-tardis-em.viewer_mem_2d,Predict Microtubules 2D,napari_tardis_em.viewers.viewer_mem_2d:TardisWidget,napari-tardis-em.viewer_actin_3d,Predict Actin 3D,napari_tardis_em.viewers.viewer_actin_3d:TardisWidget,napari-tardis-em.viewer_analysis_fibers,Fiber analysis,napari_tardis_em.viewers.viewer_analysis_fibers:TardisWidget,,,,,,,,napari-tardis-em.viewer_mem_3d,Predict Membrane 3D,False,napari-tardis-em.viewer_mem_2d,Predict Membrane 2D,False,napari-tardis-em.viewer_actin_3d,Predict Actin 3D,False,napari-tardis-em.viewer_analysis_fibers,Fiber analysis,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +372,napari-text-layer,0.1.2,napari-text-layer,Text layer for bio-image annotation.,Hanjin Liu,BSD 3-Clause,UNKNOWN,61f553f79501cf2a1d03b6de,['conda'],,https://pypi.org/project/napari-text-layer/,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-text-layer,http://api.anaconda.org/packages/conda-forge/napari-text-layer,http://anaconda.org/conda-forge/napari-text-layer,['0.1.2'],0.1.2,0.1.2,['noarch'],3.0,https://github.com/hanjinliu/napari-text-layer,['pyhd8ed1ab_0'],0.1.2,conda-forge/napari-text-layer/0.1.2,1.0,0.0,2022-01-29 14:49:25.031000+00:00,2023-06-18 08:40:39.404000+00:00,conda,noarch/napari-text-layer-0.1.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'numpy', 'python >=3.7']",noarch,1643467605959.0,None-any-None,pyhd8ed1ab_0,2022-01-29 14:49:25.730000+00:00,74c326a9a38985c7a6c907b70633de97,None,10226.0,conda-forge/napari-text-layer/0.1.2/noarch/napari-text-layer-0.1.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-text-layer/0.1.2/noarch/napari-text-layer-0.1.2-pyhd8ed1ab_0.tar.bz2,conda,0.1.2,conda-forge,['main'],public,,0.2.1,napari-text-layer.TextLayerOverview,TextLayerOverview,napari_text_layer.textlayer:TextLayerOverview,,,,2.1,napari-text-layer,0.1.2,['UNKNOWN'],Text layer for bio-image annotation.,"# napari-text-layer Napari text layer for bio-image annotation. @@ -36929,8 +38727,8 @@ pip install napari-text-layer - double click ... Enter edit mode at the clicked shape. -",text/markdown,UNKNOWN,Hanjin Liu,liuhanjin-sc@g.ecc.u-tokyo.ac.jp,BSD 3-Clause,"['Framework :: napari', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9']",,>=3.7,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-text-layer.TextLayerOverview,TextLayerOverview,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -355,napari-threedee,0.0.27,napari-threedee,A suite of useful tools based on 3D interactivity in napari,napari team,BSD-3-Clause,https://github.com/alisterburt/napari-threedee,6356a030670f22280d31a8ab,['conda'],,https://github.com/alisterburt/napari-threedee,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-threedee,http://api.anaconda.org/packages/conda-forge/napari-threedee,http://anaconda.org/conda-forge/napari-threedee,"['0.0.1', '0.0.2', '0.0.3', '0.0.7', '0.0.17', '0.0.18', '0.0.19', '0.0.20', '0.0.21', '0.0.24', '0.0.26', '0.0.27']",0.0.27,0.0.27,['noarch'],43.0,,"['pyh9208f05_0', 'pyhd8ed1ab_0']",0.0.1,conda-forge/napari-threedee/0.0.1,1.0,0.0,2022-10-24 14:24:46.034000+00:00,2024-09-19 01:12:28.155000+00:00,conda,noarch/napari-threedee-0.0.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'npe2', 'numpy', 'python >=3.8', 'qtpy']",noarch,1666621338179.0,None-any-None,pyhd8ed1ab_0,2022-10-24 14:24:46.339000+00:00,d0eee7ebc490b19ae9563ad422089728,None,24437.0,conda-forge/napari-threedee/0.0.1/noarch/napari-threedee-0.0.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-threedee/0.0.1/noarch/napari-threedee-0.0.1-pyhd8ed1ab_0.tar.bz2,conda,0.0.1,conda-forge,['main'],hidden,,0.1.0,napari-threedee.QtPointAnnotatorWidget,Create point annotator,napari_threedee.dock_widgets:QtPointAnnotatorWidget,,,,2.1,napari-threedee,0.0.27,,A suite of useful tools based on 3D interactivity in napari,"# napari-threedee +",text/markdown,UNKNOWN,Hanjin Liu,liuhanjin-sc@g.ecc.u-tokyo.ac.jp,BSD 3-Clause,"['Framework :: napari', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9']",,>=3.7,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-text-layer.TextLayerOverview,TextLayerOverview,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +373,napari-threedee,0.0.28,napari-threedee,A suite of useful tools based on 3D interactivity in napari,napari team,BSD-3-Clause,https://github.com/alisterburt/napari-threedee,6356a030670f22280d31a8ab,['conda'],,https://github.com/alisterburt/napari-threedee,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-threedee,http://api.anaconda.org/packages/conda-forge/napari-threedee,http://anaconda.org/conda-forge/napari-threedee,"['0.0.1', '0.0.2', '0.0.3', '0.0.7', '0.0.17', '0.0.18', '0.0.19', '0.0.20', '0.0.21', '0.0.24', '0.0.26', '0.0.27', '0.0.28']",0.0.28,0.0.28,['noarch'],47.0,,"['pyh73487a3_0', 'pyh9208f05_0', 'pyhd8ed1ab_0']",0.0.1,conda-forge/napari-threedee/0.0.1,1.0,0.0,2022-10-24 14:24:46.034000+00:00,2024-10-09 01:59:36.012000+00:00,conda,noarch/napari-threedee-0.0.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'npe2', 'numpy', 'python >=3.8', 'qtpy']",noarch,1666621338179.0,None-any-None,pyhd8ed1ab_0,2022-10-24 14:24:46.339000+00:00,d0eee7ebc490b19ae9563ad422089728,None,24437.0,conda-forge/napari-threedee/0.0.1/noarch/napari-threedee-0.0.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-threedee/0.0.1/noarch/napari-threedee-0.0.1-pyhd8ed1ab_0.tar.bz2,conda,0.0.1,conda-forge,['main'],hidden,,0.1.0,napari-threedee.QtPointAnnotatorWidget,Create point annotator,napari_threedee.dock_widgets:QtPointAnnotatorWidget,,,,2.1,napari-threedee,0.0.28,,A suite of useful tools based on 3D interactivity in napari,"# napari-threedee [![License](https://img.shields.io/pypi/l/napari-threedee.svg?color=green)](https://github.com/alisterburt/napari-threedee/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-threedee.svg?color=green)](https://pypi.org/project/napari-threedee) @@ -37051,8 +38849,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/alisterburt/napari-threedee,napari team,napari-steering-council@googlegroups.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['einops', 'imageio!=2.11.0,!=2.22.1,>=2.5.0', 'libigl', 'magicgui', 'morphosamplers', 'mrcfile', 'napari', 'numpy', 'pandas', 'pooch', 'psygnal', 'pydantic', 'qtpy', 'scipy', 'superqt', 'vispy', 'zarr', 'lxml[html_clean]>5; extra == ""dev""', 'mkdocs; extra == ""dev""', 'mkdocs-gallery>0.7.6; extra == ""dev""', 'mkdocs-material; extra == ""dev""', 'mkdocstrings[python]; extra == ""dev""', 'mkdocs-video; extra == ""dev""', 'pytest; extra == ""dev""', 'pytest-qt; extra == ""dev""', 'qtgallery; extra == ""dev""', 'scikit-image[data]; extra == ""dev""']",>=3.8,"['Bug Tracker, https://github.com/napari-threedee/napari-threedee/issues', 'Documentation, https://github.com/napari-threedee/napari-threedee#README.md', 'Source Code, https://github.com/napari-threedee/napari-threedee', 'User Support, https://github.com/napari-threedee/napari-threedee/issues']",['dev'],False,0.0.2,conda-forge/napari-threedee/0.0.2,0.0.3,conda-forge/napari-threedee/0.0.3,0.0.7,conda-forge/napari-threedee/0.0.7,conda,noarch/napari-threedee-0.0.2-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['einops', 'napari', 'npe2', 'numpy', 'python >=3.8', 'qtpy']",pyhd8ed1ab_0,1670090807949.0,None-any-None,noarch,2022-12-03 18:08:48.474000+00:00,7b4cfb75be3a3d235a0f245f1c555252,20ba1ffb69bf24c3513b54fbff75f9939d9e0fdc7e5e61f049b6c1f9ae911ef7,43158.0,conda-forge/napari-threedee/0.0.2/noarch/napari-threedee-0.0.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-threedee/0.0.2/noarch/napari-threedee-0.0.2-pyhd8ed1ab_0.conda,conda,0.0.2,conda-forge,['main'],conda,noarch/napari-threedee-0.0.3-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['einops', 'morphosamplers', 'napari', 'npe2', 'numpy', 'python >=3.8', 'qtpy']",noarch,1679650873220.0,None-any-None,pyhd8ed1ab_0,2023-03-24 09:43:07.489000+00:00,481fc5940218ff26df90d7007ecb0c34,a02c07599ecafd51d105905271de1b8fe2e95c028c14d62a4c77bf45d8dc811d,51347.0,conda-forge/napari-threedee/0.0.3/noarch/napari-threedee-0.0.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-threedee/0.0.3/noarch/napari-threedee-0.0.3-pyhd8ed1ab_0.conda,conda,0.0.3,conda-forge,['main'],conda,noarch/napari-threedee-0.0.7-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['einops', 'morphosamplers', 'napari', 'npe2', 'numpy', 'python >=3.8', 'qtpy']",BSD-3-Clause,python,1683600818657.0,2023-05-09 02:55:59.234000+00:00,39d2ea357b215f20053cae8a8a016c31,e0e25c4aa4d7543c7537d78c9d79a247697ab295e7192f8cf4916646435ab2b9,56435.0,conda-forge/napari-threedee/0.0.7/noarch/napari-threedee-0.0.7-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-threedee/0.0.7/noarch/napari-threedee-0.0.7-pyhd8ed1ab_0.conda,conda,0.0.7,conda-forge,['main'],,napari-threedee.QtPathAnnotatorWidget,Create path annotator,napari_threedee.dock_widgets:QtPathAnnotatorWidget,napari-threedee.QtSphereAnnotatorWidget,Create sphere annotator,napari_threedee.dock_widgets:QtSphereAnnotatorWidget,napari-threedee.QtSurfaceAnnotatorWidget,Create surface annotator,napari_threedee.dock_widgets:QtSurfaceAnnotatorWidget,napari-threedee.QtPointAnnotatorWidget,point annotator,False,napari-threedee.QtPathAnnotatorWidget,path annotator,False,napari-threedee.QtSphereAnnotatorWidget,sphere annotator,False,napari-threedee.QtSurfaceAnnotatorWidget,surface annotator,False,napari-threedee.QtLabelAnnotatorWidget,Create label annotator,napari_threedee.dock_widgets:QtLabelAnnotatorWidget,,,,,,,,napari-threedee.hiv_particles,unique_id.1,HIV virus-like particles tomogram,0.0.17,conda-forge/napari-threedee/0.0.17,0.0.18,conda-forge/napari-threedee/0.0.18,0.0.19,conda-forge/napari-threedee/0.0.19,conda,noarch/napari-threedee-0.0.17-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['einops', 'magicgui', 'morphosamplers', 'napari', 'numpy', 'pandas', 'psygnal', 'pydantic', 'python >=3.8', 'qtpy', 'scipy', 'superqt', 'vispy', 'zarr']",noarch,1714332168000.0,None-any-None,pyhd8ed1ab_0,2024-04-28 19:25:03.438000+00:00,bda90285b579cc23b3d7a0dcc9b45af3,fe64c158662d7ae0496dcb744f9aedf5ac405f4bbaaa9284c3ce4f208cb99de9,61577.0,conda-forge/napari-threedee/0.0.17/noarch/napari-threedee-0.0.17-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-threedee/0.0.17/noarch/napari-threedee-0.0.17-pyhd8ed1ab_0.conda,conda,0.0.17,conda-forge,['main'],conda,noarch/napari-threedee-0.0.18-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['einops', 'magicgui', 'morphosamplers', 'napari', 'numpy', 'pandas', 'psygnal', 'pydantic', 'python >=3.8', 'qtpy', 'scipy', 'superqt', 'vispy', 'zarr']",noarch,1714415512957.0,None-any-None,pyh9208f05_0,2024-04-29 18:33:38.712000+00:00,219fa51afab35300d9d35859ff08af49,40343992c2039b06b25b9f572cb2d339e60b33545e76d37caa67095c4664a580,62227.0,conda-forge/napari-threedee/0.0.18/noarch/napari-threedee-0.0.18-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-threedee/0.0.18/noarch/napari-threedee-0.0.18-pyh9208f05_0.conda,conda,0.0.18,conda-forge,['main'],conda,noarch/napari-threedee-0.0.19-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['einops', 'magicgui', 'morphosamplers', 'napari', 'numpy', 'pandas', 'psygnal', 'pydantic', 'python >=3.8', 'qtpy', 'scipy', 'superqt', 'vispy', 'zarr']",BSD-3-Clause,python,1715114586723.0,2024-05-07 20:45:30.795000+00:00,9936c8810e110990c2834a0e072c65e7,a61bee020abbd341fc6400ad520b814b367eb8d9d733a530955fe88217e7c5ae,62183.0,conda-forge/napari-threedee/0.0.19/noarch/napari-threedee-0.0.19-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-threedee/0.0.19/noarch/napari-threedee-0.0.19-pyh9208f05_0.conda,conda,0.0.19,conda-forge,['main'],,,,napari-threedee.QtRenderPlaneManipulatorWidget,Create render plane manipulator,napari_threedee.dock_widgets:QtRenderPlaneManipulatorWidget,0.0.20,conda-forge/napari-threedee/0.0.20,0.0.21,conda-forge/napari-threedee/0.0.21,conda,noarch/napari-threedee-0.0.20-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['einops', 'magicgui', 'morphosamplers', 'napari', 'numpy', 'pandas', 'psygnal', 'pydantic', 'python >=3.8', 'qtpy', 'scipy', 'superqt', 'vispy', 'zarr']",noarch,1717491399495.0,None-any-None,pyh9208f05_0,2024-06-04 08:58:27.888000+00:00,d8e606dc48a38ba5d54f55c795c43a46,7f2a8c674614b0bbb2887de6ab5c27169528205aecb7e37cf3d08f16b7741467,62830.0,conda-forge/napari-threedee/0.0.20/noarch/napari-threedee-0.0.20-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-threedee/0.0.20/noarch/napari-threedee-0.0.20-pyh9208f05_0.conda,conda,0.0.20,conda-forge,['main'],conda,noarch/napari-threedee-0.0.21-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['einops', 'magicgui', 'morphosamplers', 'napari', 'numpy', 'pandas', 'psygnal', 'pydantic', 'python >=3.8', 'qtpy', 'scipy', 'superqt', 'vispy', 'zarr']",BSD-3-Clause,python,1717512849999.0,2024-06-04 14:56:03.980000+00:00,7a619f470723cce45fa194e5dfc75569,28ddc5e33c03f45d18479d15dec89229e8120458882a33099815391987db835b,63270.0,conda-forge/napari-threedee/0.0.21/noarch/napari-threedee-0.0.21-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-threedee/0.0.21/noarch/napari-threedee-0.0.21-pyh9208f05_0.conda,conda,0.0.21,conda-forge,['main'],napari-threedee.QtPointManipulatorWidget,Create point manipulator,napari_threedee.dock_widgets:QtPointManipulatorWidget,napari-threedee.QtLayerManipulatorWidget,Create layer manipulator,napari_threedee.dock_widgets:QtLayerManipulatorWidget,napari-threedee.QtLightingControlWidget,Create mesh lighting control,napari_threedee.dock_widgets:QtLightingControlWidget,napari-threedee.QtAmbientOcclusionWidget,Create ambient occlusion widget,napari_threedee.dock_widgets:QtAmbientOcclusionWidget,napari-threedee.QtCameraSplineWidget,Create camera spline control widget,napari_threedee.dock_widgets:QtCameraSpline,napari-threedee.hiv_particles,Load HIV tomogram,napari_threedee._sample_data:hiv_sample_tomogram,,napari-threedee.QtLabelAnnotatorWidget,label annotator,False,napari-threedee.QtRenderPlaneManipulatorWidget,render plane manipulator,False,napari-threedee.QtPointManipulatorWidget,point manipulator,False,napari-threedee.QtLayerManipulatorWidget,layer manipulator,False,conda,noarch/napari-threedee-0.0.24-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['einops', 'magicgui', 'morphosamplers', 'napari', 'numpy', 'pandas', 'psygnal', 'pydantic', 'python >=3.8', 'qtpy', 'scipy', 'superqt', 'vispy', 'zarr']",BSD-3-Clause,python,1718427280069.0,2024-06-15 04:56:26.739000+00:00,384a26c771e08761df75df0b420a4fbc,11d616ad491d590c58ae87be75c2a98b6f25b13dc047896b8e1832d23815d459,63357.0,conda-forge/napari-threedee/0.0.24/noarch/napari-threedee-0.0.24-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-threedee/0.0.24/noarch/napari-threedee-0.0.24-pyh9208f05_0.conda,conda,0.0.24,conda-forge,['main'],0.0.24,conda-forge/napari-threedee/0.0.24,conda,noarch/napari-threedee-0.0.26-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['einops', 'magicgui', 'morphosamplers', 'napari', 'numpy', 'pandas', 'psygnal', 'pydantic', 'python >=3.8', 'qtpy', 'scipy', 'superqt', 'vispy', 'zarr']",BSD-3-Clause,1721005716811.0,2024-07-15 01:10:33.362000+00:00,0187270a3c5037cc62e350d2b4281486,e5113a8ced8fe8d6edac03ec24b9118dec1d50d1939841b7db97df675d5940fa,65908.0,conda-forge/napari-threedee/0.0.26/noarch/napari-threedee-0.0.26-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-threedee/0.0.26/noarch/napari-threedee-0.0.26-pyh9208f05_0.conda,conda,0.0.26,conda-forge,['main'],conda,noarch/napari-threedee-0.0.27-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['einops', 'magicgui', 'morphosamplers', 'napari', 'numpy', 'pandas', 'psygnal', 'pydantic', 'python >=3.8', 'qtpy', 'scipy', 'superqt', 'vispy', 'zarr']",BSD-3-Clause,1726708242451.0,2024-09-19 01:12:25.152000+00:00,ed919eca386250a7ea7a00c2019886da,b1bef3033971991b2774c14dbc1c44607e4c66aa59c576274a6709147663c9b2,66278.0,conda-forge/napari-threedee/0.0.27/noarch/napari-threedee-0.0.27-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-threedee/0.0.27/noarch/napari-threedee-0.0.27-pyh9208f05_0.conda,conda,0.0.27,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,, -356,napari-tiff,0.1.3,napari-tiff,official napari tiff reader and writer.,"Genevieve Buckley, napari-tiff contributors"," +",text/markdown,https://github.com/alisterburt/napari-threedee,napari team,napari-steering-council@googlegroups.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['einops', 'imageio!=2.11.0,!=2.22.1,>=2.5.0', 'libigl', 'magicgui', 'morphosamplers', 'mrcfile', 'napari', 'numpy', 'pandas', 'pooch', 'psygnal', 'pydantic', 'qtpy', 'scipy', 'superqt', 'vispy', 'zarr', 'lxml[html_clean]>5; extra == ""dev""', 'mkdocs; extra == ""dev""', 'mkdocs-gallery>0.7.6; extra == ""dev""', 'mkdocs-material; extra == ""dev""', 'mkdocstrings[python]; extra == ""dev""', 'mkdocs-video; extra == ""dev""', 'pytest; extra == ""dev""', 'pytest-qt; extra == ""dev""', 'qtgallery; extra == ""dev""', 'scikit-image[data]; extra == ""dev""']",>=3.8,"['Bug Tracker, https://github.com/napari-threedee/napari-threedee/issues', 'Documentation, https://github.com/napari-threedee/napari-threedee#README.md', 'Source Code, https://github.com/napari-threedee/napari-threedee', 'User Support, https://github.com/napari-threedee/napari-threedee/issues']",['dev'],False,0.0.2,conda-forge/napari-threedee/0.0.2,0.0.3,conda-forge/napari-threedee/0.0.3,0.0.7,conda-forge/napari-threedee/0.0.7,conda,noarch/napari-threedee-0.0.2-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['einops', 'napari', 'npe2', 'numpy', 'python >=3.8', 'qtpy']",pyhd8ed1ab_0,1670090807949.0,None-any-None,noarch,2022-12-03 18:08:48.474000+00:00,7b4cfb75be3a3d235a0f245f1c555252,20ba1ffb69bf24c3513b54fbff75f9939d9e0fdc7e5e61f049b6c1f9ae911ef7,43158.0,conda-forge/napari-threedee/0.0.2/noarch/napari-threedee-0.0.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-threedee/0.0.2/noarch/napari-threedee-0.0.2-pyhd8ed1ab_0.conda,conda,0.0.2,conda-forge,['main'],conda,noarch/napari-threedee-0.0.3-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['einops', 'morphosamplers', 'napari', 'npe2', 'numpy', 'python >=3.8', 'qtpy']",noarch,1679650873220.0,None-any-None,pyhd8ed1ab_0,2023-03-24 09:43:07.489000+00:00,481fc5940218ff26df90d7007ecb0c34,a02c07599ecafd51d105905271de1b8fe2e95c028c14d62a4c77bf45d8dc811d,51347.0,conda-forge/napari-threedee/0.0.3/noarch/napari-threedee-0.0.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-threedee/0.0.3/noarch/napari-threedee-0.0.3-pyhd8ed1ab_0.conda,conda,0.0.3,conda-forge,['main'],conda,noarch/napari-threedee-0.0.7-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['einops', 'morphosamplers', 'napari', 'npe2', 'numpy', 'python >=3.8', 'qtpy']",BSD-3-Clause,python,1683600818657.0,2023-05-09 02:55:59.234000+00:00,39d2ea357b215f20053cae8a8a016c31,e0e25c4aa4d7543c7537d78c9d79a247697ab295e7192f8cf4916646435ab2b9,56435.0,conda-forge/napari-threedee/0.0.7/noarch/napari-threedee-0.0.7-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-threedee/0.0.7/noarch/napari-threedee-0.0.7-pyhd8ed1ab_0.conda,conda,0.0.7,conda-forge,['main'],,napari-threedee.QtPathAnnotatorWidget,Create path annotator,napari_threedee.dock_widgets:QtPathAnnotatorWidget,napari-threedee.QtSphereAnnotatorWidget,Create sphere annotator,napari_threedee.dock_widgets:QtSphereAnnotatorWidget,napari-threedee.QtSurfaceAnnotatorWidget,Create surface annotator,napari_threedee.dock_widgets:QtSurfaceAnnotatorWidget,napari-threedee.QtPointAnnotatorWidget,point annotator,False,napari-threedee.QtPathAnnotatorWidget,path annotator,False,napari-threedee.QtSphereAnnotatorWidget,sphere annotator,False,napari-threedee.QtSurfaceAnnotatorWidget,surface annotator,False,napari-threedee.QtLabelAnnotatorWidget,Create label annotator,napari_threedee.dock_widgets:QtLabelAnnotatorWidget,,,,,,,,napari-threedee.hiv_particles,unique_id.1,HIV virus-like particles tomogram,0.0.17,conda-forge/napari-threedee/0.0.17,0.0.18,conda-forge/napari-threedee/0.0.18,0.0.19,conda-forge/napari-threedee/0.0.19,conda,noarch/napari-threedee-0.0.17-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['einops', 'magicgui', 'morphosamplers', 'napari', 'numpy', 'pandas', 'psygnal', 'pydantic', 'python >=3.8', 'qtpy', 'scipy', 'superqt', 'vispy', 'zarr']",noarch,1714332168000.0,None-any-None,pyhd8ed1ab_0,2024-04-28 19:25:03.438000+00:00,bda90285b579cc23b3d7a0dcc9b45af3,fe64c158662d7ae0496dcb744f9aedf5ac405f4bbaaa9284c3ce4f208cb99de9,61577.0,conda-forge/napari-threedee/0.0.17/noarch/napari-threedee-0.0.17-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-threedee/0.0.17/noarch/napari-threedee-0.0.17-pyhd8ed1ab_0.conda,conda,0.0.17,conda-forge,['main'],conda,noarch/napari-threedee-0.0.18-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['einops', 'magicgui', 'morphosamplers', 'napari', 'numpy', 'pandas', 'psygnal', 'pydantic', 'python >=3.8', 'qtpy', 'scipy', 'superqt', 'vispy', 'zarr']",noarch,1714415512957.0,None-any-None,pyh9208f05_0,2024-04-29 18:33:38.712000+00:00,219fa51afab35300d9d35859ff08af49,40343992c2039b06b25b9f572cb2d339e60b33545e76d37caa67095c4664a580,62227.0,conda-forge/napari-threedee/0.0.18/noarch/napari-threedee-0.0.18-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-threedee/0.0.18/noarch/napari-threedee-0.0.18-pyh9208f05_0.conda,conda,0.0.18,conda-forge,['main'],conda,noarch/napari-threedee-0.0.19-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['einops', 'magicgui', 'morphosamplers', 'napari', 'numpy', 'pandas', 'psygnal', 'pydantic', 'python >=3.8', 'qtpy', 'scipy', 'superqt', 'vispy', 'zarr']",BSD-3-Clause,python,1715114586723.0,2024-05-07 20:45:30.795000+00:00,9936c8810e110990c2834a0e072c65e7,a61bee020abbd341fc6400ad520b814b367eb8d9d733a530955fe88217e7c5ae,62183.0,conda-forge/napari-threedee/0.0.19/noarch/napari-threedee-0.0.19-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-threedee/0.0.19/noarch/napari-threedee-0.0.19-pyh9208f05_0.conda,conda,0.0.19,conda-forge,['main'],,,,napari-threedee.QtRenderPlaneManipulatorWidget,Create render plane manipulator,napari_threedee.dock_widgets:QtRenderPlaneManipulatorWidget,0.0.20,conda-forge/napari-threedee/0.0.20,0.0.21,conda-forge/napari-threedee/0.0.21,conda,noarch/napari-threedee-0.0.20-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['einops', 'magicgui', 'morphosamplers', 'napari', 'numpy', 'pandas', 'psygnal', 'pydantic', 'python >=3.8', 'qtpy', 'scipy', 'superqt', 'vispy', 'zarr']",noarch,1717491399495.0,None-any-None,pyh9208f05_0,2024-06-04 08:58:27.888000+00:00,d8e606dc48a38ba5d54f55c795c43a46,7f2a8c674614b0bbb2887de6ab5c27169528205aecb7e37cf3d08f16b7741467,62830.0,conda-forge/napari-threedee/0.0.20/noarch/napari-threedee-0.0.20-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-threedee/0.0.20/noarch/napari-threedee-0.0.20-pyh9208f05_0.conda,conda,0.0.20,conda-forge,['main'],conda,noarch/napari-threedee-0.0.21-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['einops', 'magicgui', 'morphosamplers', 'napari', 'numpy', 'pandas', 'psygnal', 'pydantic', 'python >=3.8', 'qtpy', 'scipy', 'superqt', 'vispy', 'zarr']",BSD-3-Clause,python,1717512849999.0,2024-06-04 14:56:03.980000+00:00,7a619f470723cce45fa194e5dfc75569,28ddc5e33c03f45d18479d15dec89229e8120458882a33099815391987db835b,63270.0,conda-forge/napari-threedee/0.0.21/noarch/napari-threedee-0.0.21-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-threedee/0.0.21/noarch/napari-threedee-0.0.21-pyh9208f05_0.conda,conda,0.0.21,conda-forge,['main'],napari-threedee.QtPointManipulatorWidget,Create point manipulator,napari_threedee.dock_widgets:QtPointManipulatorWidget,napari-threedee.QtLayerManipulatorWidget,Create layer manipulator,napari_threedee.dock_widgets:QtLayerManipulatorWidget,napari-threedee.QtLightingControlWidget,Create mesh lighting control,napari_threedee.dock_widgets:QtLightingControlWidget,napari-threedee.QtAmbientOcclusionWidget,Create ambient occlusion widget,napari_threedee.dock_widgets:QtAmbientOcclusionWidget,napari-threedee.QtCameraSplineWidget,Create camera spline control widget,napari_threedee.dock_widgets:QtCameraSpline,,napari-threedee.QtLabelAnnotatorWidget,label annotator,False,napari-threedee.QtRenderPlaneManipulatorWidget,render plane manipulator,False,napari-threedee.QtPointManipulatorWidget,point manipulator,False,napari-threedee.QtLayerManipulatorWidget,layer manipulator,False,conda,noarch/napari-threedee-0.0.24-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['einops', 'magicgui', 'morphosamplers', 'napari', 'numpy', 'pandas', 'psygnal', 'pydantic', 'python >=3.8', 'qtpy', 'scipy', 'superqt', 'vispy', 'zarr']",BSD-3-Clause,python,1718427280069.0,2024-06-15 04:56:26.739000+00:00,384a26c771e08761df75df0b420a4fbc,11d616ad491d590c58ae87be75c2a98b6f25b13dc047896b8e1832d23815d459,63357.0,conda-forge/napari-threedee/0.0.24/noarch/napari-threedee-0.0.24-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-threedee/0.0.24/noarch/napari-threedee-0.0.24-pyh9208f05_0.conda,conda,0.0.24,conda-forge,['main'],conda,noarch/napari-threedee-0.0.26-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['einops', 'magicgui', 'morphosamplers', 'napari', 'numpy', 'pandas', 'psygnal', 'pydantic', 'python >=3.8', 'qtpy', 'scipy', 'superqt', 'vispy', 'zarr']",BSD-3-Clause,python,1721005716811.0,2024-07-15 01:10:33.362000+00:00,0187270a3c5037cc62e350d2b4281486,e5113a8ced8fe8d6edac03ec24b9118dec1d50d1939841b7db97df675d5940fa,65908.0,conda-forge/napari-threedee/0.0.26/noarch/napari-threedee-0.0.26-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-threedee/0.0.26/noarch/napari-threedee-0.0.26-pyh9208f05_0.conda,conda,0.0.26,conda-forge,['main'],0.0.24,conda-forge/napari-threedee/0.0.24,conda,noarch/napari-threedee-0.0.27-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['einops', 'magicgui', 'morphosamplers', 'napari', 'numpy', 'pandas', 'psygnal', 'pydantic', 'python >=3.8', 'qtpy', 'scipy', 'superqt', 'vispy', 'zarr']",BSD-3-Clause,1726708242451.0,2024-09-19 01:12:25.152000+00:00,ed919eca386250a7ea7a00c2019886da,b1bef3033971991b2774c14dbc1c44607e4c66aa59c576274a6709147663c9b2,66278.0,conda-forge/napari-threedee/0.0.27/noarch/napari-threedee-0.0.27-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-threedee/0.0.27/noarch/napari-threedee-0.0.27-pyh9208f05_0.conda,conda,0.0.27,conda-forge,['main'],0.0.26,conda-forge/napari-threedee/0.0.26,conda,noarch/napari-threedee-0.0.28-pyh73487a3_0.conda,None-any-None,False,noarch,pyh73487a3_0,0.0,"['einops', 'magicgui', 'morphosamplers', 'napari', 'numpy', 'pandas', 'psygnal', 'pydantic', 'python >=3.8', 'qtpy', 'scipy', 'superqt', 'vispy', 'zarr']",BSD-3-Clause,1728439053560.0,2024-10-09 01:59:33.867000+00:00,f9a433c7ba2c99fad73f22483d3ed304,aeb60ada8ad67bd558ef6f849f40b2d69928fee99e14bd24bb29900f43a7d3c3,66045.0,conda-forge/napari-threedee/0.0.28/noarch/napari-threedee-0.0.28-pyh73487a3_0.conda,//api.anaconda.org/download/conda-forge/napari-threedee/0.0.28/noarch/napari-threedee-0.0.28-pyh73487a3_0.conda,conda,0.0.28,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,, +374,napari-tiff,0.1.3,napari-tiff,official napari tiff reader and writer.,"Genevieve Buckley, napari-tiff contributors"," Copyright (c) 2020, Genevieve Buckley All rights reserved. @@ -37165,8 +38963,8 @@ SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. -","['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Intended Audience :: Education', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Software Development :: Libraries', 'Topic :: Scientific/Engineering', 'Programming Language :: Python :: Implementation :: CPython', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['imagecodecs', 'numpy', 'tifffile >=2023.9.26', 'zarr', ""build ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""tox ; extra == 'testing'""]",>=3.10,"['source, https://github.com/napari/napari-tiff', 'tracker, https://github.com/napari/napari-tiff/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -357,napari-tiledb-bioimg,0.0.1,napari TileDB bioimaging,Support reading and writing TileDB-Bioimaging image arrays within Napari,"TileDB, Inc.",MIT,https://github.com/TileDB-Inc/napari-tiledb-bioimg,657381f039811177ff9ef3b4,['conda'],,https://pypi.org/project/napari-tiledb-bioimg,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-tiledb-bioimg,http://api.anaconda.org/packages/conda-forge/napari-tiledb-bioimg,http://anaconda.org/conda-forge/napari-tiledb-bioimg,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,https://github.com/TileDB-Inc/napari-tiledb-bioimg,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-tiledb-bioimg/0.0.1,1.0,0.0,2023-12-08 20:51:56.813000+00:00,2023-12-08 20:52:00.335000+00:00,conda,noarch/napari-tiledb-bioimg-0.0.1-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['dask-core', 'napari', 'python >=3.8', 'tiledb-bioimg >=0.2.1', 'tiledb-py']",noarch,1702068597688.0,None-any-None,pyhd8ed1ab_0,2023-12-08 20:51:57.140000+00:00,ee3b0aaf78ca758a8506d2c7a67dd511,0d1218f5b8a8d5d4eca22c168696313d234c787ca81b227c745b072d40b89503,592840.0,conda-forge/napari-tiledb-bioimg/0.0.1/noarch/napari-tiledb-bioimg-0.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-tiledb-bioimg/0.0.1/noarch/napari-tiledb-bioimg-0.0.1-pyhd8ed1ab_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-tiledb-bioimg.get_reader,TileDB Reader,napari_tiledb_bioimg._reader:napari_get_reader,napari-tiledb-bioimg.get_reader,"['tiledb://*', 's3://*', '*.tdb', '*.tiledb']",True,2.1,napari-tiledb-bioimg,0.0.1,,Support reading and writing TileDB-Bioimaging image arrays within Napari,"# napari-tiledb-bioimg +","['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Intended Audience :: Education', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Software Development :: Libraries', 'Topic :: Scientific/Engineering', 'Programming Language :: Python :: Implementation :: CPython', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['imagecodecs', 'numpy', 'tifffile >=2023.9.26', 'zarr', ""build ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""tox ; extra == 'testing'""]",>=3.10,"['source, https://github.com/napari/napari-tiff', 'tracker, https://github.com/napari/napari-tiff/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +375,napari-tiledb-bioimg,0.0.1,napari TileDB bioimaging,Support reading and writing TileDB-Bioimaging image arrays within Napari,"TileDB, Inc.",MIT,https://github.com/TileDB-Inc/napari-tiledb-bioimg,657381f039811177ff9ef3b4,['conda'],,https://pypi.org/project/napari-tiledb-bioimg,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-tiledb-bioimg,http://api.anaconda.org/packages/conda-forge/napari-tiledb-bioimg,http://anaconda.org/conda-forge/napari-tiledb-bioimg,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,https://github.com/TileDB-Inc/napari-tiledb-bioimg,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-tiledb-bioimg/0.0.1,1.0,0.0,2023-12-08 20:51:56.813000+00:00,2023-12-08 20:52:00.335000+00:00,conda,noarch/napari-tiledb-bioimg-0.0.1-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['dask-core', 'napari', 'python >=3.8', 'tiledb-bioimg >=0.2.1', 'tiledb-py']",noarch,1702068597688.0,None-any-None,pyhd8ed1ab_0,2023-12-08 20:51:57.140000+00:00,ee3b0aaf78ca758a8506d2c7a67dd511,0d1218f5b8a8d5d4eca22c168696313d234c787ca81b227c745b072d40b89503,592840.0,conda-forge/napari-tiledb-bioimg/0.0.1/noarch/napari-tiledb-bioimg-0.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-tiledb-bioimg/0.0.1/noarch/napari-tiledb-bioimg-0.0.1-pyhd8ed1ab_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-tiledb-bioimg.get_reader,TileDB Reader,napari_tiledb_bioimg._reader:napari_get_reader,napari-tiledb-bioimg.get_reader,"['tiledb://*', 's3://*', '*.tdb', '*.tiledb']",True,2.1,napari-tiledb-bioimg,0.0.1,,Support reading and writing TileDB-Bioimaging image arrays within Napari,"# napari-tiledb-bioimg [![License MIT](https://img.shields.io/pypi/l/napari-tiledb-bioimg.svg?color=green)](https://github.com/TileDB-Inc/napari-tiledb-bioimg/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-tiledb-bioimg.svg?color=green)](https://pypi.org/project/napari-tiledb-bioimg) @@ -37229,8 +39027,8 @@ Distributed under the terms of the [MIT] license, ## Issues If you encounter any problems, please [file an issue](https://github.com/TileDB-Inc/napari-tiledb-bioimg/issues/new) along with a detailed description. -",text/markdown,https://github.com/TileDB-Inc/napari-tiledb-bioimg,"TileDB, Inc.",help@tiledb.io,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['dask', 'tiledb-bioimg (>=0.2.1)', ""tiledb-cloud ; extra == 'cloud'"", ""napari ; extra == 'testing'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.8,,"['cloud', 'testing']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-tiledb-bioimg.write_image_lossless,Save image data with TileDB BioImaging Napari Plugin (lossless),napari_tiledb_bioimg._writer:napari_write_image_lossless,napari-tiledb-bioimg.write_image_lossy,Save image data with TileDB BioImaging Napari Plugin (lossy),napari_tiledb_bioimg._writer:napari_write_image_lossy,napari-tiledb-bioimg.make_qwidget,Make TileDBWidget,napari_tiledb_bioimg._widget:TileDBWidget,napari-tiledb-bioimg.make_qwidget,TileDB,False,,,,,,,,,,,,,napari-tiledb-bioimg.write_image_lossless,['image'],lossless,napari-tiledb-bioimg.write_image_lossy,['image'],,lossy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -358,napari-tiler,0.0.9,napari-tiler,N-dimensional tiling and merging support for napari,Tim Morello,LICENCE,,620e494627bdd9a91cb40ac7,['conda'],,https://pypi.org/project/napari-tiler/,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-tiler,http://api.anaconda.org/packages/conda-forge/napari-tiler,http://anaconda.org/conda-forge/napari-tiler,['0.0.9'],0.0.9,,"['linux-64', 'osx-64', 'win-64']",3.0,https://github.com/tdmorello/napari-tiler,"['py310h2ec42d9_1', 'py310h5588dad_1', 'py310hff52083_1', 'py37h03978a9_0', 'py37h03978a9_1', 'py37h89c1867_0', 'py37h89c1867_1', 'py37hf985489_0', 'py37hf985489_1', 'py38h50d1736_0', 'py38h50d1736_1', 'py38h578d9bd_0', 'py38h578d9bd_1', 'py38haa244fe_0', 'py38haa244fe_1', 'py39h6e9494a_0', 'py39h6e9494a_1', 'py39hcbf5309_0', 'py39hcbf5309_1', 'py39hf3d152e_0', 'py39hf3d152e_1']",0.0.9,conda-forge/napari-tiler/0.0.9,1.0,0.0,2022-02-17 13:10:27.998000+00:00,2023-06-18 08:40:53.309000+00:00,conda,linux-64/napari-tiler-0.0.9-py38h578d9bd_0.tar.bz2,0.0,BSD-3-Clause,False,,"['napari-plugin-engine >=0.2.0', 'napari-tools-menu >=0.1.7', 'numpy >=1.21.4', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'tiler >=0.4.1']",linux-64,1645103304135.0,x86_64-any-linux,py38h578d9bd_0,2022-02-17 13:10:28.553000+00:00,965f4ec44a1402e31e7274a362c61e46,None,20898.0,conda-forge/napari-tiler/0.0.9/linux-64/napari-tiler-0.0.9-py38h578d9bd_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-tiler/0.0.9/linux-64/napari-tiler-0.0.9-py38h578d9bd_0.tar.bz2,conda,0.0.9,conda-forge,['main'],public,,0.2.1,napari-tiler.TilerWidget,TilerWidget,napari_tiler.tiler_widget:TilerWidget,,,,2.1,napari-tiler,0.0.9,,N-dimensional tiling and merging support for napari,"# napari-tiler +",text/markdown,https://github.com/TileDB-Inc/napari-tiledb-bioimg,"TileDB, Inc.",help@tiledb.io,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['dask', 'tiledb-bioimg (>=0.2.1)', ""tiledb-cloud ; extra == 'cloud'"", ""napari ; extra == 'testing'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.8,,"['cloud', 'testing']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-tiledb-bioimg.write_image_lossless,Save image data with TileDB BioImaging Napari Plugin (lossless),napari_tiledb_bioimg._writer:napari_write_image_lossless,napari-tiledb-bioimg.write_image_lossy,Save image data with TileDB BioImaging Napari Plugin (lossy),napari_tiledb_bioimg._writer:napari_write_image_lossy,napari-tiledb-bioimg.make_qwidget,Make TileDBWidget,napari_tiledb_bioimg._widget:TileDBWidget,napari-tiledb-bioimg.make_qwidget,TileDB,False,,,,,,,,,,,,,napari-tiledb-bioimg.write_image_lossless,['image'],lossless,napari-tiledb-bioimg.write_image_lossy,['image'],,lossy,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +376,napari-tiler,0.0.9,napari-tiler,N-dimensional tiling and merging support for napari,Tim Morello,LICENCE,,620e494627bdd9a91cb40ac7,['conda'],,https://pypi.org/project/napari-tiler/,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-tiler,http://api.anaconda.org/packages/conda-forge/napari-tiler,http://anaconda.org/conda-forge/napari-tiler,['0.0.9'],0.0.9,,"['linux-64', 'osx-64', 'win-64']",3.0,https://github.com/tdmorello/napari-tiler,"['py310h2ec42d9_1', 'py310h5588dad_1', 'py310hff52083_1', 'py37h03978a9_0', 'py37h03978a9_1', 'py37h89c1867_0', 'py37h89c1867_1', 'py37hf985489_0', 'py37hf985489_1', 'py38h50d1736_0', 'py38h50d1736_1', 'py38h578d9bd_0', 'py38h578d9bd_1', 'py38haa244fe_0', 'py38haa244fe_1', 'py39h6e9494a_0', 'py39h6e9494a_1', 'py39hcbf5309_0', 'py39hcbf5309_1', 'py39hf3d152e_0', 'py39hf3d152e_1']",0.0.9,conda-forge/napari-tiler/0.0.9,1.0,0.0,2022-02-17 13:10:27.998000+00:00,2023-06-18 08:40:53.309000+00:00,conda,linux-64/napari-tiler-0.0.9-py38h578d9bd_0.tar.bz2,0.0,BSD-3-Clause,False,,"['napari-plugin-engine >=0.2.0', 'napari-tools-menu >=0.1.7', 'numpy >=1.21.4', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'tiler >=0.4.1']",linux-64,1645103304135.0,x86_64-any-linux,py38h578d9bd_0,2022-02-17 13:10:28.553000+00:00,965f4ec44a1402e31e7274a362c61e46,None,20898.0,conda-forge/napari-tiler/0.0.9/linux-64/napari-tiler-0.0.9-py38h578d9bd_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-tiler/0.0.9/linux-64/napari-tiler-0.0.9-py38h578d9bd_0.tar.bz2,conda,0.0.9,conda-forge,['main'],public,,0.2.1,napari-tiler.TilerWidget,TilerWidget,napari_tiler.tiler_widget:TilerWidget,,,,2.1,napari-tiler,0.0.9,,N-dimensional tiling and merging support for napari,"# napari-tiler [![License](https://img.shields.io/pypi/l/napari-tiler.svg?color=green)](https://github.com/tdmorello/napari-tiler/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-tiler.svg?color=green)](https://pypi.org/project/napari-tiler) @@ -37319,8 +39117,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,,Tim Morello,tdmorello@gmail.com,LICENCE,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'License :: Other/Proprietary License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Topic :: Software Development :: Testing']","['importlib-metadata (<4.3); python_version < ""3.8""', 'napari-plugin-engine (>=0.2.0,<0.3.0)', 'napari-tools-menu (>=0.1.7,<0.2.0)', 'numpy (>=1.21.4,<2.0.0)', 'tiler (>=0.4.1,<0.5.0)']",">=3.7,<3.11","['Bug Tracker, https://github.com/tdmorello/napari-tiler/issues', 'Documentation, https://github.com/tdmorello/napari-tiler#README.md', 'Source Code, https://github.com/tdmorello/napari-tiler', 'User Support, https://github.com/tdmorello/napari-tiler/issues']",,True,,,,,,,conda,linux-64/napari-tiler-0.0.9-py39hf3d152e_0.tar.bz2,0.0,BSD-3-Clause,False,,"['napari-plugin-engine >=0.2.0', 'napari-tools-menu >=0.1.7', 'numpy >=1.21.4', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'tiler >=0.4.1']",py39hf3d152e_0,1645103311662.0,x86_64-any-linux,linux-64,2022-02-17 13:10:30.106000+00:00,b52d3f79872d6ccc242c4f3a749f1f04,None,20884.0,conda-forge/napari-tiler/0.0.9/linux-64/napari-tiler-0.0.9-py39hf3d152e_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-tiler/0.0.9/linux-64/napari-tiler-0.0.9-py39hf3d152e_0.tar.bz2,conda,0.0.9,conda-forge,['main'],conda,linux-64/napari-tiler-0.0.9-py37h89c1867_0.tar.bz2,0.0,BSD-3-Clause,False,,"['importlib-metadata <4.3', 'napari-plugin-engine >=0.2.0', 'napari-tools-menu >=0.1.7', 'numpy >=1.21.4', 'python >=3.7,<3.8.0a0', 'python_abi 3.7.* *_cp37m', 'tiler >=0.4.1']",linux-64,1645103319671.0,x86_64-any-linux,py37h89c1867_0,2022-02-17 13:10:36.823000+00:00,31873f10ce2a37964b24c1a685577427,None,20844.0,conda-forge/napari-tiler/0.0.9/linux-64/napari-tiler-0.0.9-py37h89c1867_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-tiler/0.0.9/linux-64/napari-tiler-0.0.9-py37h89c1867_0.tar.bz2,conda,0.0.9,conda-forge,['main'],conda,osx-64/napari-tiler-0.0.9-py38h50d1736_0.tar.bz2,x86_64-any-darwin,False,osx-64,py38h50d1736_0,0.0,"['napari-plugin-engine >=0.2.0', 'napari-tools-menu >=0.1.7', 'numpy >=1.21.4', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'tiler >=0.4.1']",BSD-3-Clause,,1645103455946.0,2022-02-17 13:14:06.881000+00:00,ca011a3b201def4e259595638db98e8d,None,20903.0,conda-forge/napari-tiler/0.0.9/osx-64/napari-tiler-0.0.9-py38h50d1736_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-tiler/0.0.9/osx-64/napari-tiler-0.0.9-py38h50d1736_0.tar.bz2,conda,0.0.9,conda-forge,['main'],,napari-tiler.MergerWidget,MergerWidget,napari_tiler.merger_widget:MergerWidget,,,,,,,napari-tiler.TilerWidget,TilerWidget,False,napari-tiler.MergerWidget,MergerWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,conda,osx-64/napari-tiler-0.0.9-py37hf985489_0.tar.bz2,0.0,BSD-3-Clause,False,,"['importlib-metadata <4.3', 'napari-plugin-engine >=0.2.0', 'napari-tools-menu >=0.1.7', 'numpy >=1.21.4', 'python >=3.7,<3.8.0a0', 'python_abi 3.7.* *_cp37m', 'tiler >=0.4.1']",osx-64,1645103418606.0,x86_64-any-darwin,py37hf985489_0,2022-02-17 13:14:09.116000+00:00,a73a1b6c25331f78abd8a631dd044795,None,20873.0,conda-forge/napari-tiler/0.0.9/osx-64/napari-tiler-0.0.9-py37hf985489_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-tiler/0.0.9/osx-64/napari-tiler-0.0.9-py37hf985489_0.tar.bz2,conda,0.0.9,conda-forge,['main'],conda,osx-64/napari-tiler-0.0.9-py39h6e9494a_0.tar.bz2,0.0,BSD-3-Clause,False,,"['napari-plugin-engine >=0.2.0', 'napari-tools-menu >=0.1.7', 'numpy >=1.21.4', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'tiler >=0.4.1']",osx-64,1645103719082.0,x86_64-any-darwin,py39h6e9494a_0,2022-02-17 13:18:46.978000+00:00,e4afec6ae243e93eefa080b08e34bd25,None,20935.0,conda-forge/napari-tiler/0.0.9/osx-64/napari-tiler-0.0.9-py39h6e9494a_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-tiler/0.0.9/osx-64/napari-tiler-0.0.9-py39h6e9494a_0.tar.bz2,conda,0.0.9,conda-forge,['main'],conda,win-64/napari-tiler-0.0.9-py37h03978a9_0.tar.bz2,x86_64-any-win32,False,win-64,py37h03978a9_0,0.0,"['importlib-metadata <4.3', 'napari-plugin-engine >=0.2.0', 'napari-tools-menu >=0.1.7', 'numpy >=1.21.4', 'python >=3.7,<3.8.0a0', 'python_abi 3.7.* *_cp37m', 'tiler >=0.4.1']",BSD-3-Clause,,1645103614839.0,2022-02-17 13:22:02.444000+00:00,e0bda091e3729a5be360b732600ebf8e,None,21344.0,conda-forge/napari-tiler/0.0.9/win-64/napari-tiler-0.0.9-py37h03978a9_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-tiler/0.0.9/win-64/napari-tiler-0.0.9-py37h03978a9_0.tar.bz2,conda,0.0.9,conda-forge,['main'],,,,,,,,,,,conda,win-64/napari-tiler-0.0.9-py38haa244fe_0.tar.bz2,0.0,BSD-3-Clause,False,,"['napari-plugin-engine >=0.2.0', 'napari-tools-menu >=0.1.7', 'numpy >=1.21.4', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'tiler >=0.4.1']",win-64,1645103683870.0,x86_64-any-win32,py38haa244fe_0,2022-02-17 13:23:32.762000+00:00,bc024908e37398cba66afc8bb5c398e8,None,21371.0,conda-forge/napari-tiler/0.0.9/win-64/napari-tiler-0.0.9-py38haa244fe_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-tiler/0.0.9/win-64/napari-tiler-0.0.9-py38haa244fe_0.tar.bz2,conda,0.0.9,conda-forge,['main'],conda,win-64/napari-tiler-0.0.9-py39hcbf5309_0.tar.bz2,x86_64-any-win32,False,win-64,py39hcbf5309_0,0.0,"['napari-plugin-engine >=0.2.0', 'napari-tools-menu >=0.1.7', 'numpy >=1.21.4', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'tiler >=0.4.1']",BSD-3-Clause,,1645104518966.0,2022-02-17 13:37:00.052000+00:00,c750baba60343109566a8f4e48edc0e1,None,21396.0,conda-forge/napari-tiler/0.0.9/win-64/napari-tiler-0.0.9-py39hcbf5309_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-tiler/0.0.9/win-64/napari-tiler-0.0.9-py39hcbf5309_0.tar.bz2,conda,0.0.9,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,conda,linux-64/napari-tiler-0.0.9-py37h89c1867_1.tar.bz2,x86_64-any-linux,False,linux-64,py37h89c1867_1,1.0,"['importlib-metadata <4.3', 'napari-plugin-engine >=0.2.0', 'napari-tools-menu >=0.1.7', 'numpy >=1.21.4', 'python >=3.7,<3.8.0a0', 'python_abi 3.7.* *_cp37m', 'tiler >=0.4.1']",BSD-3-Clause,,1645112078557.0,2022-02-17 15:36:41.516000+00:00,293c7c168052fc12d118b6adcb2c3d97,None,20844.0,conda-forge/napari-tiler/0.0.9/linux-64/napari-tiler-0.0.9-py37h89c1867_1.tar.bz2,//api.anaconda.org/download/conda-forge/napari-tiler/0.0.9/linux-64/napari-tiler-0.0.9-py37h89c1867_1.tar.bz2,conda,0.0.9,conda-forge,['main'],,,conda,linux-64/napari-tiler-0.0.9-py310hff52083_1.tar.bz2,x86_64-any-linux,False,linux-64,py310hff52083_1,1.0,"['napari-plugin-engine >=0.2.0', 'napari-tools-menu >=0.1.7', 'numpy >=1.21.4', 'python >=3.10,<3.11.0a0', 'python_abi 3.10.* *_cp310', 'tiler >=0.4.1']",BSD-3-Clause,1645112075691.0,2022-02-17 15:36:48.750000+00:00,d3861eb3bdc38ee45280d9494ed29dff,None,20971.0,conda-forge/napari-tiler/0.0.9/linux-64/napari-tiler-0.0.9-py310hff52083_1.tar.bz2,//api.anaconda.org/download/conda-forge/napari-tiler/0.0.9/linux-64/napari-tiler-0.0.9-py310hff52083_1.tar.bz2,conda,0.0.9,conda-forge,['main'],conda,linux-64/napari-tiler-0.0.9-py38h578d9bd_1.tar.bz2,x86_64-any-linux,False,linux-64,py38h578d9bd_1,1.0,"['napari-plugin-engine >=0.2.0', 'napari-tools-menu >=0.1.7', 'numpy >=1.21.4', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'tiler >=0.4.1']",BSD-3-Clause,1645112094711.0,2022-02-17 15:37:05.591000+00:00,5684f15fe4d46f4943be2c4ea67a3a6a,None,20876.0,conda-forge/napari-tiler/0.0.9/linux-64/napari-tiler-0.0.9-py38h578d9bd_1.tar.bz2,//api.anaconda.org/download/conda-forge/napari-tiler/0.0.9/linux-64/napari-tiler-0.0.9-py38h578d9bd_1.tar.bz2,conda,0.0.9,conda-forge,['main'],conda,linux-64/napari-tiler-0.0.9-py39hf3d152e_1.tar.bz2,x86_64-any-linux,False,linux-64,py39hf3d152e_1,1.0,"['napari-plugin-engine >=0.2.0', 'napari-tools-menu >=0.1.7', 'numpy >=1.21.4', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'tiler >=0.4.1']",BSD-3-Clause,1645112096359.0,2022-02-17 15:37:09.130000+00:00,7c82eeec889d467329f0068e679151ee,None,20898.0,conda-forge/napari-tiler/0.0.9/linux-64/napari-tiler-0.0.9-py39hf3d152e_1.tar.bz2,//api.anaconda.org/download/conda-forge/napari-tiler/0.0.9/linux-64/napari-tiler-0.0.9-py39hf3d152e_1.tar.bz2,conda,0.0.9,conda-forge,['main'],,, -359,napari-time-series-plotter,0.0.6,TSP,"A Plugin for napari to visualize pixel values over the first dimension (time -> t+3D, t+2D) as graphs.",Christopher Nauroth-Kress,BSD-3-Clause,https://github.com/ch-n/napari-time_series_plotter,61f9313139552dcb59f4a051,['conda'],,https://github.com/ch-n/napari-time_series_plotter,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-time-series-plotter,http://api.anaconda.org/packages/conda-forge/napari-time-series-plotter,http://anaconda.org/conda-forge/napari-time-series-plotter,"['0.0.2', '0.0.3', '0.0.4', '0.0.5', '0.0.6']",0.0.5,0.0.6,['noarch'],7.0,,['pyhd8ed1ab_0'],0.0.2,conda-forge/napari-time-series-plotter/0.0.2,1.0,0.0,2022-02-01 13:10:06.286000+00:00,2023-07-25 18:44:49.515000+00:00,conda,noarch/napari-time-series-plotter-0.0.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['matplotlib-base', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'qtpy']",noarch,1643720842732.0,None-any-None,pyhd8ed1ab_0,2022-02-01 13:10:06.906000+00:00,1fa04f538191f0c635531f052ef36478,None,13966.0,conda-forge/napari-time-series-plotter/0.0.2/noarch/napari-time-series-plotter-0.0.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-time-series-plotter/0.0.2/noarch/napari-time-series-plotter-0.0.2-pyhd8ed1ab_0.tar.bz2,conda,0.0.2,conda-forge,['main'],public,,0.1.0,napari-time-series-plotter.Explorer,Dock TSPExplorer widget,napari_time_series_plotter.dock_widgets:TSPExplorer,,,,2.1,napari-time-series-plotter,0.0.6,,"A Plugin for napari to visualize pixel values over the first dimension (time -> t+3D, t+2D) as graphs.","# napari-time_series_plotter +",text/markdown,,Tim Morello,tdmorello@gmail.com,LICENCE,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'License :: Other/Proprietary License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Topic :: Software Development :: Testing']","['importlib-metadata (<4.3); python_version < ""3.8""', 'napari-plugin-engine (>=0.2.0,<0.3.0)', 'napari-tools-menu (>=0.1.7,<0.2.0)', 'numpy (>=1.21.4,<2.0.0)', 'tiler (>=0.4.1,<0.5.0)']",">=3.7,<3.11","['Bug Tracker, https://github.com/tdmorello/napari-tiler/issues', 'Documentation, https://github.com/tdmorello/napari-tiler#README.md', 'Source Code, https://github.com/tdmorello/napari-tiler', 'User Support, https://github.com/tdmorello/napari-tiler/issues']",,True,,,,,,,conda,linux-64/napari-tiler-0.0.9-py39hf3d152e_0.tar.bz2,0.0,BSD-3-Clause,False,,"['napari-plugin-engine >=0.2.0', 'napari-tools-menu >=0.1.7', 'numpy >=1.21.4', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'tiler >=0.4.1']",py39hf3d152e_0,1645103311662.0,x86_64-any-linux,linux-64,2022-02-17 13:10:30.106000+00:00,b52d3f79872d6ccc242c4f3a749f1f04,None,20884.0,conda-forge/napari-tiler/0.0.9/linux-64/napari-tiler-0.0.9-py39hf3d152e_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-tiler/0.0.9/linux-64/napari-tiler-0.0.9-py39hf3d152e_0.tar.bz2,conda,0.0.9,conda-forge,['main'],conda,linux-64/napari-tiler-0.0.9-py37h89c1867_0.tar.bz2,0.0,BSD-3-Clause,False,,"['importlib-metadata <4.3', 'napari-plugin-engine >=0.2.0', 'napari-tools-menu >=0.1.7', 'numpy >=1.21.4', 'python >=3.7,<3.8.0a0', 'python_abi 3.7.* *_cp37m', 'tiler >=0.4.1']",linux-64,1645103319671.0,x86_64-any-linux,py37h89c1867_0,2022-02-17 13:10:36.823000+00:00,31873f10ce2a37964b24c1a685577427,None,20844.0,conda-forge/napari-tiler/0.0.9/linux-64/napari-tiler-0.0.9-py37h89c1867_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-tiler/0.0.9/linux-64/napari-tiler-0.0.9-py37h89c1867_0.tar.bz2,conda,0.0.9,conda-forge,['main'],conda,osx-64/napari-tiler-0.0.9-py38h50d1736_0.tar.bz2,x86_64-any-darwin,False,osx-64,py38h50d1736_0,0.0,"['napari-plugin-engine >=0.2.0', 'napari-tools-menu >=0.1.7', 'numpy >=1.21.4', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'tiler >=0.4.1']",BSD-3-Clause,,1645103455946.0,2022-02-17 13:14:06.881000+00:00,ca011a3b201def4e259595638db98e8d,None,20903.0,conda-forge/napari-tiler/0.0.9/osx-64/napari-tiler-0.0.9-py38h50d1736_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-tiler/0.0.9/osx-64/napari-tiler-0.0.9-py38h50d1736_0.tar.bz2,conda,0.0.9,conda-forge,['main'],,napari-tiler.MergerWidget,MergerWidget,napari_tiler.merger_widget:MergerWidget,,,,,,,napari-tiler.TilerWidget,TilerWidget,False,napari-tiler.MergerWidget,MergerWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,conda,osx-64/napari-tiler-0.0.9-py37hf985489_0.tar.bz2,0.0,BSD-3-Clause,False,,"['importlib-metadata <4.3', 'napari-plugin-engine >=0.2.0', 'napari-tools-menu >=0.1.7', 'numpy >=1.21.4', 'python >=3.7,<3.8.0a0', 'python_abi 3.7.* *_cp37m', 'tiler >=0.4.1']",osx-64,1645103418606.0,x86_64-any-darwin,py37hf985489_0,2022-02-17 13:14:09.116000+00:00,a73a1b6c25331f78abd8a631dd044795,None,20873.0,conda-forge/napari-tiler/0.0.9/osx-64/napari-tiler-0.0.9-py37hf985489_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-tiler/0.0.9/osx-64/napari-tiler-0.0.9-py37hf985489_0.tar.bz2,conda,0.0.9,conda-forge,['main'],conda,osx-64/napari-tiler-0.0.9-py39h6e9494a_0.tar.bz2,0.0,BSD-3-Clause,False,,"['napari-plugin-engine >=0.2.0', 'napari-tools-menu >=0.1.7', 'numpy >=1.21.4', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'tiler >=0.4.1']",osx-64,1645103719082.0,x86_64-any-darwin,py39h6e9494a_0,2022-02-17 13:18:46.978000+00:00,e4afec6ae243e93eefa080b08e34bd25,None,20935.0,conda-forge/napari-tiler/0.0.9/osx-64/napari-tiler-0.0.9-py39h6e9494a_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-tiler/0.0.9/osx-64/napari-tiler-0.0.9-py39h6e9494a_0.tar.bz2,conda,0.0.9,conda-forge,['main'],conda,win-64/napari-tiler-0.0.9-py37h03978a9_0.tar.bz2,x86_64-any-win32,False,win-64,py37h03978a9_0,0.0,"['importlib-metadata <4.3', 'napari-plugin-engine >=0.2.0', 'napari-tools-menu >=0.1.7', 'numpy >=1.21.4', 'python >=3.7,<3.8.0a0', 'python_abi 3.7.* *_cp37m', 'tiler >=0.4.1']",BSD-3-Clause,,1645103614839.0,2022-02-17 13:22:02.444000+00:00,e0bda091e3729a5be360b732600ebf8e,None,21344.0,conda-forge/napari-tiler/0.0.9/win-64/napari-tiler-0.0.9-py37h03978a9_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-tiler/0.0.9/win-64/napari-tiler-0.0.9-py37h03978a9_0.tar.bz2,conda,0.0.9,conda-forge,['main'],,,,,,,,,,,conda,win-64/napari-tiler-0.0.9-py38haa244fe_0.tar.bz2,0.0,BSD-3-Clause,False,,"['napari-plugin-engine >=0.2.0', 'napari-tools-menu >=0.1.7', 'numpy >=1.21.4', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'tiler >=0.4.1']",win-64,1645103683870.0,x86_64-any-win32,py38haa244fe_0,2022-02-17 13:23:32.762000+00:00,bc024908e37398cba66afc8bb5c398e8,None,21371.0,conda-forge/napari-tiler/0.0.9/win-64/napari-tiler-0.0.9-py38haa244fe_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-tiler/0.0.9/win-64/napari-tiler-0.0.9-py38haa244fe_0.tar.bz2,conda,0.0.9,conda-forge,['main'],conda,win-64/napari-tiler-0.0.9-py39hcbf5309_0.tar.bz2,x86_64-any-win32,False,win-64,py39hcbf5309_0,0.0,"['napari-plugin-engine >=0.2.0', 'napari-tools-menu >=0.1.7', 'numpy >=1.21.4', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'tiler >=0.4.1']",BSD-3-Clause,,1645104518966.0,2022-02-17 13:37:00.052000+00:00,c750baba60343109566a8f4e48edc0e1,None,21396.0,conda-forge/napari-tiler/0.0.9/win-64/napari-tiler-0.0.9-py39hcbf5309_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-tiler/0.0.9/win-64/napari-tiler-0.0.9-py39hcbf5309_0.tar.bz2,conda,0.0.9,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,conda,linux-64/napari-tiler-0.0.9-py37h89c1867_1.tar.bz2,x86_64-any-linux,False,linux-64,py37h89c1867_1,1.0,"['importlib-metadata <4.3', 'napari-plugin-engine >=0.2.0', 'napari-tools-menu >=0.1.7', 'numpy >=1.21.4', 'python >=3.7,<3.8.0a0', 'python_abi 3.7.* *_cp37m', 'tiler >=0.4.1']",BSD-3-Clause,,1645112078557.0,2022-02-17 15:36:41.516000+00:00,293c7c168052fc12d118b6adcb2c3d97,None,20844.0,conda-forge/napari-tiler/0.0.9/linux-64/napari-tiler-0.0.9-py37h89c1867_1.tar.bz2,//api.anaconda.org/download/conda-forge/napari-tiler/0.0.9/linux-64/napari-tiler-0.0.9-py37h89c1867_1.tar.bz2,conda,0.0.9,conda-forge,['main'],conda,linux-64/napari-tiler-0.0.9-py310hff52083_1.tar.bz2,x86_64-any-linux,False,linux-64,py310hff52083_1,1.0,"['napari-plugin-engine >=0.2.0', 'napari-tools-menu >=0.1.7', 'numpy >=1.21.4', 'python >=3.10,<3.11.0a0', 'python_abi 3.10.* *_cp310', 'tiler >=0.4.1']",BSD-3-Clause,,1645112075691.0,2022-02-17 15:36:48.750000+00:00,d3861eb3bdc38ee45280d9494ed29dff,None,20971.0,conda-forge/napari-tiler/0.0.9/linux-64/napari-tiler-0.0.9-py310hff52083_1.tar.bz2,//api.anaconda.org/download/conda-forge/napari-tiler/0.0.9/linux-64/napari-tiler-0.0.9-py310hff52083_1.tar.bz2,conda,0.0.9,conda-forge,['main'],,,conda,linux-64/napari-tiler-0.0.9-py38h578d9bd_1.tar.bz2,x86_64-any-linux,False,linux-64,py38h578d9bd_1,1.0,"['napari-plugin-engine >=0.2.0', 'napari-tools-menu >=0.1.7', 'numpy >=1.21.4', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'tiler >=0.4.1']",BSD-3-Clause,1645112094711.0,2022-02-17 15:37:05.591000+00:00,5684f15fe4d46f4943be2c4ea67a3a6a,None,20876.0,conda-forge/napari-tiler/0.0.9/linux-64/napari-tiler-0.0.9-py38h578d9bd_1.tar.bz2,//api.anaconda.org/download/conda-forge/napari-tiler/0.0.9/linux-64/napari-tiler-0.0.9-py38h578d9bd_1.tar.bz2,conda,0.0.9,conda-forge,['main'],,,conda,linux-64/napari-tiler-0.0.9-py39hf3d152e_1.tar.bz2,x86_64-any-linux,False,linux-64,py39hf3d152e_1,1.0,"['napari-plugin-engine >=0.2.0', 'napari-tools-menu >=0.1.7', 'numpy >=1.21.4', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'tiler >=0.4.1']",BSD-3-Clause,1645112096359.0,2022-02-17 15:37:09.130000+00:00,7c82eeec889d467329f0068e679151ee,None,20898.0,conda-forge/napari-tiler/0.0.9/linux-64/napari-tiler-0.0.9-py39hf3d152e_1.tar.bz2,//api.anaconda.org/download/conda-forge/napari-tiler/0.0.9/linux-64/napari-tiler-0.0.9-py39hf3d152e_1.tar.bz2,conda,0.0.9,conda-forge,['main'],conda,osx-64/napari-tiler-0.0.9-py37hf985489_1.tar.bz2,x86_64-any-darwin,False,osx-64,py37hf985489_1,1.0,"['importlib-metadata <4.3', 'napari-plugin-engine >=0.2.0', 'napari-tools-menu >=0.1.7', 'numpy >=1.21.4', 'python >=3.7,<3.8.0a0', 'python_abi 3.7.* *_cp37m', 'tiler >=0.4.1']",BSD-3-Clause,2022-02-17 15:38:32.948000+00:00,222a78b783f7dab6630aa92d6fbd4c92,None,20899.0,conda-forge/napari-tiler/0.0.9/osx-64/napari-tiler-0.0.9-py37hf985489_1.tar.bz2,//api.anaconda.org/download/conda-forge/napari-tiler/0.0.9/osx-64/napari-tiler-0.0.9-py37hf985489_1.tar.bz2,conda,0.0.9,conda-forge,['main'],,, +377,napari-time-series-plotter,0.0.6,TSP,"A Plugin for napari to visualize pixel values over the first dimension (time -> t+3D, t+2D) as graphs.",Christopher Nauroth-Kress,BSD-3-Clause,https://github.com/ch-n/napari-time_series_plotter,61f9313139552dcb59f4a051,['conda'],,https://github.com/ch-n/napari-time_series_plotter,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-time-series-plotter,http://api.anaconda.org/packages/conda-forge/napari-time-series-plotter,http://anaconda.org/conda-forge/napari-time-series-plotter,"['0.0.2', '0.0.3', '0.0.4', '0.0.5', '0.0.6']",0.0.5,0.0.6,['noarch'],7.0,,['pyhd8ed1ab_0'],0.0.2,conda-forge/napari-time-series-plotter/0.0.2,1.0,0.0,2022-02-01 13:10:06.286000+00:00,2023-07-25 18:44:49.515000+00:00,conda,noarch/napari-time-series-plotter-0.0.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['matplotlib-base', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'qtpy']",noarch,1643720842732.0,None-any-None,pyhd8ed1ab_0,2022-02-01 13:10:06.906000+00:00,1fa04f538191f0c635531f052ef36478,None,13966.0,conda-forge/napari-time-series-plotter/0.0.2/noarch/napari-time-series-plotter-0.0.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-time-series-plotter/0.0.2/noarch/napari-time-series-plotter-0.0.2-pyhd8ed1ab_0.tar.bz2,conda,0.0.2,conda-forge,['main'],public,,0.1.0,napari-time-series-plotter.Explorer,Dock TSPExplorer widget,napari_time_series_plotter.dock_widgets:TSPExplorer,,,,2.1,napari-time-series-plotter,0.0.6,,"A Plugin for napari to visualize pixel values over the first dimension (time -> t+3D, t+2D) as graphs.","# napari-time_series_plotter [![License](https://img.shields.io/pypi/l/napari-time_series_plotter.svg?color=green)](https://github.com/ch-n/napari-time_series_plotter/raw/main/LICENSE) [![Python Version](https://img.shields.io/pypi/pyversions/napari-time_series_plotter.svg?color=green)](https://python.org) @@ -37470,8 +39268,8 @@ Images used in the demo gif were taken from [The Cancer Imaging Archive]
[tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/ch-n/napari-time_series_plotter,Christopher Nauroth-Kress,nauroth_C@ukw.de,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-matplotlib (<1.0)', 'numpy', 'pandas', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/ch-n/napari-time_series_plotter/issues', 'Documentation, https://github.com/ch-n/napari-time_series_plotter#README.md', 'Source Code, https://github.com/ch-n/napari-time_series_plotter', 'User Support, https://github.com/ch-n/napari-time_series_plotter/issues']",['testing'],False,0.0.3,conda-forge/napari-time-series-plotter/0.0.3,0.0.4,conda-forge/napari-time-series-plotter/0.0.4,0.0.5,conda-forge/napari-time-series-plotter/0.0.5,conda,noarch/napari-time-series-plotter-0.0.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['matplotlib-base >=3.4.3', 'napari >=0.4.12', 'napari-plugin-engine >=0.2.0', 'numpy >=1.21.4', 'python >=3.8', 'qtpy >=1.11.2']",pyhd8ed1ab_0,1648897221852.0,None-any-None,noarch,2022-04-02 11:02:34.811000+00:00,e671eb29c9af33fbf054bd240a470ffe,None,14545.0,conda-forge/napari-time-series-plotter/0.0.3/noarch/napari-time-series-plotter-0.0.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-time-series-plotter/0.0.3/noarch/napari-time-series-plotter-0.0.3-pyhd8ed1ab_0.tar.bz2,conda,0.0.3,conda-forge,['main'],conda,noarch/napari-time-series-plotter-0.0.4-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-matplotlib >=0.2.1', 'napari-plugin-engine >=0.2.0', 'numpy >=1.21.4', 'python >=3.8', 'qtpy >=1.11.2']",noarch,1661343802381.0,None-any-None,pyhd8ed1ab_0,2022-08-24 12:25:49.109000+00:00,e7868fe143429b7393193c53f7ef0871,None,15572.0,conda-forge/napari-time-series-plotter/0.0.4/noarch/napari-time-series-plotter-0.0.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-time-series-plotter/0.0.4/noarch/napari-time-series-plotter-0.0.4-pyhd8ed1ab_0.tar.bz2,conda,0.0.4,conda-forge,['main'],conda,noarch/napari-time-series-plotter-0.0.5-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari-matplotlib >=0.2.1', 'napari-plugin-engine >=0.2.0', 'numpy >=1.21.4', 'python >=3.8', 'qtpy >=1.11.2']",BSD-3-Clause,python,1668778763914.0,2022-11-18 13:41:46.684000+00:00,fae2ca1d5fdf07478ed6c11c3089a398,9ddc14cf0953e69eadc0d7b90af849d9e2d7efeb116af606c8fa525a793d06c8,22471.0,conda-forge/napari-time-series-plotter/0.0.5/noarch/napari-time-series-plotter-0.0.5-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-time-series-plotter/0.0.5/noarch/napari-time-series-plotter-0.0.5-pyhd8ed1ab_0.conda,conda,0.0.5,conda-forge,['main'],,napari-time-series-plotter.Inspector,Dock TSPInspector widget,napari_time_series_plotter.dock_widgets:TSPInspector,,,,,,,napari-time-series-plotter.Explorer,Explorer,False,napari-time-series-plotter.Inspector,Inspector,False,,,,,,,,,,,,,,,,,,,,0.0.6,conda-forge/napari-time-series-plotter/0.0.6,,,,,conda,noarch/napari-time-series-plotter-0.0.6-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['napari-matplotlib <1.0', 'napari-plugin-engine >=0.2.0', 'numpy >=1.21.4', 'pandas', 'python >=3.8', 'qtpy >=1.11.2']",noarch,1690310521805.0,None-any-None,pyhd8ed1ab_0,2023-07-25 18:44:47.245000+00:00,24ad70bca40c3f1b9f219f92c631a71b,a6be6ac933e5cd411c5342bad4b8388115fa21998aaa46b6a607201d1b6342fd,27249.0,conda-forge/napari-time-series-plotter/0.0.6/noarch/napari-time-series-plotter-0.0.6-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-time-series-plotter/0.0.6/noarch/napari-time-series-plotter-0.0.6-pyhd8ed1ab_0.conda,conda,0.0.6,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -360,napari-time-slicer,0.5.0,napari-time-slicer,A meta plugin for processing timelapse data in napari timepoint by timepoint,Robert Haase,BSD-3-Clause,https://github.com/haesleinhuepf/napari-time-slicer,61fa63a68d5f589364979047,['conda'],,https://github.com/haesleinhuepf/napari-time-slicer,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-time-slicer,http://api.anaconda.org/packages/conda-forge/napari-time-slicer,http://anaconda.org/conda-forge/napari-time-slicer,"['0.4.2', '0.4.3', '0.4.4', '0.4.5', '0.4.6', '0.4.7', '0.4.8', '0.4.9', '0.5.0']",0.5.0,0.5.0,['noarch'],19.0,,"['pyhd8ed1ab_0', 'pyhd8ed1ab_1']",0.4.2,conda-forge/napari-time-slicer/0.4.2,1.0,0.0,2022-02-02 10:57:40.616000+00:00,2023-11-12 19:14:23.975000+00:00,conda,noarch/napari-time-slicer-0.4.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'pyqt', 'python >=3.7', 'toolz']",noarch,1643799309409.0,None-any-None,pyhd8ed1ab_0,2022-02-02 10:57:41.035000+00:00,119a4dbb01b1a68fc237e8707e46d4de,None,11287.0,conda-forge/napari-time-slicer/0.4.2/noarch/napari-time-slicer-0.4.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-time-slicer/0.4.2/noarch/napari-time-slicer-0.4.2-pyhd8ed1ab_0.tar.bz2,conda,0.4.2,conda-forge,['main'],public,,0.2.1,napari-time-slicer.napari_experimental_provide_function,convert_to_2d_timelapse,napari_time_slicer._function:napari_experimental_provide_function,,,,2.1,napari-time-slicer,0.5.0,,A meta plugin for processing timelapse data in napari timepoint by timepoint,"# napari-time-slicer +",text/markdown,https://github.com/ch-n/napari-time_series_plotter,Christopher Nauroth-Kress,nauroth_C@ukw.de,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-matplotlib (<1.0)', 'numpy', 'pandas', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/ch-n/napari-time_series_plotter/issues', 'Documentation, https://github.com/ch-n/napari-time_series_plotter#README.md', 'Source Code, https://github.com/ch-n/napari-time_series_plotter', 'User Support, https://github.com/ch-n/napari-time_series_plotter/issues']",['testing'],False,0.0.3,conda-forge/napari-time-series-plotter/0.0.3,0.0.4,conda-forge/napari-time-series-plotter/0.0.4,0.0.5,conda-forge/napari-time-series-plotter/0.0.5,conda,noarch/napari-time-series-plotter-0.0.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['matplotlib-base >=3.4.3', 'napari >=0.4.12', 'napari-plugin-engine >=0.2.0', 'numpy >=1.21.4', 'python >=3.8', 'qtpy >=1.11.2']",pyhd8ed1ab_0,1648897221852.0,None-any-None,noarch,2022-04-02 11:02:34.811000+00:00,e671eb29c9af33fbf054bd240a470ffe,None,14545.0,conda-forge/napari-time-series-plotter/0.0.3/noarch/napari-time-series-plotter-0.0.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-time-series-plotter/0.0.3/noarch/napari-time-series-plotter-0.0.3-pyhd8ed1ab_0.tar.bz2,conda,0.0.3,conda-forge,['main'],conda,noarch/napari-time-series-plotter-0.0.4-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-matplotlib >=0.2.1', 'napari-plugin-engine >=0.2.0', 'numpy >=1.21.4', 'python >=3.8', 'qtpy >=1.11.2']",noarch,1661343802381.0,None-any-None,pyhd8ed1ab_0,2022-08-24 12:25:49.109000+00:00,e7868fe143429b7393193c53f7ef0871,None,15572.0,conda-forge/napari-time-series-plotter/0.0.4/noarch/napari-time-series-plotter-0.0.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-time-series-plotter/0.0.4/noarch/napari-time-series-plotter-0.0.4-pyhd8ed1ab_0.tar.bz2,conda,0.0.4,conda-forge,['main'],conda,noarch/napari-time-series-plotter-0.0.5-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari-matplotlib >=0.2.1', 'napari-plugin-engine >=0.2.0', 'numpy >=1.21.4', 'python >=3.8', 'qtpy >=1.11.2']",BSD-3-Clause,python,1668778763914.0,2022-11-18 13:41:46.684000+00:00,fae2ca1d5fdf07478ed6c11c3089a398,9ddc14cf0953e69eadc0d7b90af849d9e2d7efeb116af606c8fa525a793d06c8,22471.0,conda-forge/napari-time-series-plotter/0.0.5/noarch/napari-time-series-plotter-0.0.5-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-time-series-plotter/0.0.5/noarch/napari-time-series-plotter-0.0.5-pyhd8ed1ab_0.conda,conda,0.0.5,conda-forge,['main'],,napari-time-series-plotter.Inspector,Dock TSPInspector widget,napari_time_series_plotter.dock_widgets:TSPInspector,,,,,,,napari-time-series-plotter.Explorer,Explorer,False,napari-time-series-plotter.Inspector,Inspector,False,,,,,,,,,,,,,,,,,,,,0.0.6,conda-forge/napari-time-series-plotter/0.0.6,,,,,conda,noarch/napari-time-series-plotter-0.0.6-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['napari-matplotlib <1.0', 'napari-plugin-engine >=0.2.0', 'numpy >=1.21.4', 'pandas', 'python >=3.8', 'qtpy >=1.11.2']",noarch,1690310521805.0,None-any-None,pyhd8ed1ab_0,2023-07-25 18:44:47.245000+00:00,24ad70bca40c3f1b9f219f92c631a71b,a6be6ac933e5cd411c5342bad4b8388115fa21998aaa46b6a607201d1b6342fd,27249.0,conda-forge/napari-time-series-plotter/0.0.6/noarch/napari-time-series-plotter-0.0.6-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-time-series-plotter/0.0.6/noarch/napari-time-series-plotter-0.0.6-pyhd8ed1ab_0.conda,conda,0.0.6,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +378,napari-time-slicer,0.5.0,napari-time-slicer,A meta plugin for processing timelapse data in napari timepoint by timepoint,Robert Haase,BSD-3-Clause,https://github.com/haesleinhuepf/napari-time-slicer,61fa63a68d5f589364979047,['conda'],,https://github.com/haesleinhuepf/napari-time-slicer,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-time-slicer,http://api.anaconda.org/packages/conda-forge/napari-time-slicer,http://anaconda.org/conda-forge/napari-time-slicer,"['0.4.2', '0.4.3', '0.4.4', '0.4.5', '0.4.6', '0.4.7', '0.4.8', '0.4.9', '0.5.0']",0.5.0,0.5.0,['noarch'],23.0,,"['pyha07c04f_1', 'pyhd8ed1ab_0', 'pyhd8ed1ab_1']",0.4.2,conda-forge/napari-time-slicer/0.4.2,1.0,0.0,2022-02-02 10:57:40.616000+00:00,2024-12-19 08:12:45.568000+00:00,conda,noarch/napari-time-slicer-0.4.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'pyqt', 'python >=3.7', 'toolz']",noarch,1643799309409.0,None-any-None,pyhd8ed1ab_0,2022-02-02 10:57:41.035000+00:00,119a4dbb01b1a68fc237e8707e46d4de,None,11287.0,conda-forge/napari-time-slicer/0.4.2/noarch/napari-time-slicer-0.4.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-time-slicer/0.4.2/noarch/napari-time-slicer-0.4.2-pyhd8ed1ab_0.tar.bz2,conda,0.4.2,conda-forge,['main'],public,,0.2.1,napari-time-slicer.napari_experimental_provide_function,convert_to_2d_timelapse,napari_time_slicer._function:napari_experimental_provide_function,,,,2.1,napari-time-slicer,0.5.0,,A meta plugin for processing timelapse data in napari timepoint by timepoint,"# napari-time-slicer [![License](https://img.shields.io/pypi/l/napari-time-slicer.svg?color=green)](https://github.com/haesleinhuepf/napari-time-slicer/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-time-slicer.svg?color=green)](https://pypi.org/project/napari-time-slicer) @@ -37608,8 +39406,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/haesleinhuepf/napari-time-slicer,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine >=0.1.4', 'numpy', 'toolz', 'napari-tools-menu', 'napari-workflows']",>=3.8,"['Bug Tracker, https://github.com/haesleinhuepf/napari-time-slicer/issues', 'Documentation, https://github.com/haesleinhuepf/napari-time-slicer#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-time-slicer', 'User Support, https://github.com/haesleinhuepf/napari-time-slicer/issues']",,True,0.4.3,conda-forge/napari-time-slicer/0.4.3,0.4.4,conda-forge/napari-time-slicer/0.4.4,0.4.5,conda-forge/napari-time-slicer/0.4.5,conda,noarch/napari-time-slicer-0.4.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'pyqt', 'python >=3.7', 'toolz']",pyhd8ed1ab_0,1644573265034.0,None-any-None,noarch,2022-02-11 09:57:03.721000+00:00,e790326fd5eadfded7858dffc7641a10,None,11318.0,conda-forge/napari-time-slicer/0.4.3/noarch/napari-time-slicer-0.4.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-time-slicer/0.4.3/noarch/napari-time-slicer-0.4.3-pyhd8ed1ab_0.tar.bz2,conda,0.4.3,conda-forge,['main'],conda,noarch/napari-time-slicer-0.4.4-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'pyqt', 'python >=3.7', 'toolz']",noarch,1652630808682.0,None-any-None,pyhd8ed1ab_0,2022-05-15 16:09:39.205000+00:00,2975c25b8593d2f3a0295c375c219f2e,None,11547.0,conda-forge/napari-time-slicer/0.4.4/noarch/napari-time-slicer-0.4.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-time-slicer/0.4.4/noarch/napari-time-slicer-0.4.4-pyhd8ed1ab_0.tar.bz2,conda,0.4.4,conda-forge,['main'],conda,noarch/napari-time-slicer-0.4.5-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'pyqt', 'python >=3.7', 'toolz']",BSD-3-Clause,python,1654174311522.0,2022-06-02 12:54:17.686000+00:00,f27a0704e37e8c449e600cabe5c1add8,None,11551.0,conda-forge/napari-time-slicer/0.4.5/noarch/napari-time-slicer-0.4.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-time-slicer/0.4.5/noarch/napari-time-slicer-0.4.5-pyhd8ed1ab_0.tar.bz2,conda,0.4.5,conda-forge,['main'],,,,,,,,,,,napari-time-slicer.napari_experimental_provide_function,convert_to_2d_timelapse,True,,,,,,,,,,,,,,,,,,,,,,,0.4.6,conda-forge/napari-time-slicer/0.4.6,0.4.7,conda-forge/napari-time-slicer/0.4.7,0.4.8,conda-forge/napari-time-slicer/0.4.8,conda,noarch/napari-time-slicer-0.4.6-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'pyqt', 'python >=3.7', 'toolz']",noarch,1654524936809.0,None-any-None,pyhd8ed1ab_0,2022-06-06 14:17:53.990000+00:00,96ea3e8d3df77d56f52b542cfb8a33ae,None,13608.0,conda-forge/napari-time-slicer/0.4.6/noarch/napari-time-slicer-0.4.6-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-time-slicer/0.4.6/noarch/napari-time-slicer-0.4.6-pyhd8ed1ab_0.tar.bz2,conda,0.4.6,conda-forge,['main'],conda,noarch/napari-time-slicer-0.4.7-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'pyqt', 'python >=3.7', 'toolz']",noarch,1655863539184.0,None-any-None,pyhd8ed1ab_0,2022-06-22 02:08:17.595000+00:00,bf5ad10c005e6e8cf9a32dd255c69cd9,None,13601.0,conda-forge/napari-time-slicer/0.4.7/noarch/napari-time-slicer-0.4.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-time-slicer/0.4.7/noarch/napari-time-slicer-0.4.7-pyhd8ed1ab_0.tar.bz2,conda,0.4.7,conda-forge,['main'],conda,noarch/napari-time-slicer-0.4.8-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'pyqt', 'python >=3.7', 'toolz']",BSD-3-Clause,python,1656354390426.0,2022-06-27 18:28:33.545000+00:00,78b3a0c3fb2935fc401d7324e2f8babe,None,13868.0,conda-forge/napari-time-slicer/0.4.8/noarch/napari-time-slicer-0.4.8-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-time-slicer/0.4.8/noarch/napari-time-slicer-0.4.8-pyhd8ed1ab_0.tar.bz2,conda,0.4.8,conda-forge,['main'],,,,,,,0.4.9,conda-forge/napari-time-slicer/0.4.9,0.5.0,conda-forge/napari-time-slicer/0.5.0,conda,noarch/napari-time-slicer-0.4.9-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'pyqt', 'python >=3.7', 'toolz']",noarch,1657479395243.0,None-any-None,pyhd8ed1ab_0,2022-07-10 18:58:53.562000+00:00,53721580b49e6a738765c610e5b718e8,None,13880.0,conda-forge/napari-time-slicer/0.4.9/noarch/napari-time-slicer-0.4.9-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-time-slicer/0.4.9/noarch/napari-time-slicer-0.4.9-pyhd8ed1ab_0.tar.bz2,conda,0.4.9,conda-forge,['main'],conda,noarch/napari-time-slicer-0.4.9-pyhd8ed1ab_1.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_1,1.0,"['napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'python >=3.7', 'toolz']",BSD-3-Clause,python,1663177238797.0,2022-09-14 17:43:02.133000+00:00,c83d3d8288204cf2af306f60d5d9ba6a,None,13864.0,conda-forge/napari-time-slicer/0.4.9/noarch/napari-time-slicer-0.4.9-pyhd8ed1ab_1.tar.bz2,//api.anaconda.org/download/conda-forge/napari-time-slicer/0.4.9/noarch/napari-time-slicer-0.4.9-pyhd8ed1ab_1.tar.bz2,conda,0.4.9,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,conda,noarch/napari-time-slicer-0.5.0-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'python >=3.7', 'toolz']",BSD-3-Clause,python,1699816369502.0,2023-11-12 19:14:22.151000+00:00,99d2a98491e2ca8f2ffcc68c1d58a814,f7d30c31dee43ba3e3924aa50315a5639042499672ee359fe2802a6bb6197788,15481.0,conda-forge/napari-time-slicer/0.5.0/noarch/napari-time-slicer-0.5.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-time-slicer/0.5.0/noarch/napari-time-slicer-0.5.0-pyhd8ed1ab_0.conda,conda,0.5.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -361,napari-timelapse-processor,0.0.2,Timelapse Processor,meta plugin to ease processing timelapse image data,Johannes Soltwedel," +",text/markdown,https://github.com/haesleinhuepf/napari-time-slicer,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine >=0.1.4', 'numpy', 'toolz', 'napari-tools-menu', 'napari-workflows']",>=3.8,"['Bug Tracker, https://github.com/haesleinhuepf/napari-time-slicer/issues', 'Documentation, https://github.com/haesleinhuepf/napari-time-slicer#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-time-slicer', 'User Support, https://github.com/haesleinhuepf/napari-time-slicer/issues']",,True,0.4.3,conda-forge/napari-time-slicer/0.4.3,0.4.4,conda-forge/napari-time-slicer/0.4.4,0.4.5,conda-forge/napari-time-slicer/0.4.5,conda,noarch/napari-time-slicer-0.4.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'pyqt', 'python >=3.7', 'toolz']",pyhd8ed1ab_0,1644573265034.0,None-any-None,noarch,2022-02-11 09:57:03.721000+00:00,e790326fd5eadfded7858dffc7641a10,None,11318.0,conda-forge/napari-time-slicer/0.4.3/noarch/napari-time-slicer-0.4.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-time-slicer/0.4.3/noarch/napari-time-slicer-0.4.3-pyhd8ed1ab_0.tar.bz2,conda,0.4.3,conda-forge,['main'],conda,noarch/napari-time-slicer-0.4.4-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'pyqt', 'python >=3.7', 'toolz']",noarch,1652630808682.0,None-any-None,pyhd8ed1ab_0,2022-05-15 16:09:39.205000+00:00,2975c25b8593d2f3a0295c375c219f2e,None,11547.0,conda-forge/napari-time-slicer/0.4.4/noarch/napari-time-slicer-0.4.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-time-slicer/0.4.4/noarch/napari-time-slicer-0.4.4-pyhd8ed1ab_0.tar.bz2,conda,0.4.4,conda-forge,['main'],conda,noarch/napari-time-slicer-0.4.5-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'pyqt', 'python >=3.7', 'toolz']",BSD-3-Clause,python,1654174311522.0,2022-06-02 12:54:17.686000+00:00,f27a0704e37e8c449e600cabe5c1add8,None,11551.0,conda-forge/napari-time-slicer/0.4.5/noarch/napari-time-slicer-0.4.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-time-slicer/0.4.5/noarch/napari-time-slicer-0.4.5-pyhd8ed1ab_0.tar.bz2,conda,0.4.5,conda-forge,['main'],,,,,,,,,,,napari-time-slicer.napari_experimental_provide_function,convert_to_2d_timelapse,True,,,,,,,,,,,,,,,,,,,,,,,0.4.6,conda-forge/napari-time-slicer/0.4.6,0.4.7,conda-forge/napari-time-slicer/0.4.7,0.4.8,conda-forge/napari-time-slicer/0.4.8,conda,noarch/napari-time-slicer-0.4.6-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'pyqt', 'python >=3.7', 'toolz']",noarch,1654524936809.0,None-any-None,pyhd8ed1ab_0,2022-06-06 14:17:53.990000+00:00,96ea3e8d3df77d56f52b542cfb8a33ae,None,13608.0,conda-forge/napari-time-slicer/0.4.6/noarch/napari-time-slicer-0.4.6-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-time-slicer/0.4.6/noarch/napari-time-slicer-0.4.6-pyhd8ed1ab_0.tar.bz2,conda,0.4.6,conda-forge,['main'],conda,noarch/napari-time-slicer-0.4.7-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'pyqt', 'python >=3.7', 'toolz']",noarch,1655863539184.0,None-any-None,pyhd8ed1ab_0,2022-06-22 02:08:17.595000+00:00,bf5ad10c005e6e8cf9a32dd255c69cd9,None,13601.0,conda-forge/napari-time-slicer/0.4.7/noarch/napari-time-slicer-0.4.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-time-slicer/0.4.7/noarch/napari-time-slicer-0.4.7-pyhd8ed1ab_0.tar.bz2,conda,0.4.7,conda-forge,['main'],conda,noarch/napari-time-slicer-0.4.8-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'pyqt', 'python >=3.7', 'toolz']",BSD-3-Clause,python,1656354390426.0,2022-06-27 18:28:33.545000+00:00,78b3a0c3fb2935fc401d7324e2f8babe,None,13868.0,conda-forge/napari-time-slicer/0.4.8/noarch/napari-time-slicer-0.4.8-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-time-slicer/0.4.8/noarch/napari-time-slicer-0.4.8-pyhd8ed1ab_0.tar.bz2,conda,0.4.8,conda-forge,['main'],,,,,,,0.4.9,conda-forge/napari-time-slicer/0.4.9,0.5.0,conda-forge/napari-time-slicer/0.5.0,conda,noarch/napari-time-slicer-0.4.9-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'pyqt', 'python >=3.7', 'toolz']",noarch,1657479395243.0,None-any-None,pyhd8ed1ab_0,2022-07-10 18:58:53.562000+00:00,53721580b49e6a738765c610e5b718e8,None,13880.0,conda-forge/napari-time-slicer/0.4.9/noarch/napari-time-slicer-0.4.9-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-time-slicer/0.4.9/noarch/napari-time-slicer-0.4.9-pyhd8ed1ab_0.tar.bz2,conda,0.4.9,conda-forge,['main'],conda,noarch/napari-time-slicer-0.4.9-pyhd8ed1ab_1.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_1,1.0,"['napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'python >=3.7', 'toolz']",BSD-3-Clause,python,1663177238797.0,2022-09-14 17:43:02.133000+00:00,c83d3d8288204cf2af306f60d5d9ba6a,None,13864.0,conda-forge/napari-time-slicer/0.4.9/noarch/napari-time-slicer-0.4.9-pyhd8ed1ab_1.tar.bz2,//api.anaconda.org/download/conda-forge/napari-time-slicer/0.4.9/noarch/napari-time-slicer-0.4.9-pyhd8ed1ab_1.tar.bz2,conda,0.4.9,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,conda,noarch/napari-time-slicer-0.5.0-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'python >=3.7', 'toolz']",BSD-3-Clause,python,1699816369502.0,2023-11-12 19:14:22.151000+00:00,99d2a98491e2ca8f2ffcc68c1d58a814,f7d30c31dee43ba3e3924aa50315a5639042499672ee359fe2802a6bb6197788,15481.0,conda-forge/napari-time-slicer/0.5.0/noarch/napari-time-slicer-0.5.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-time-slicer/0.5.0/noarch/napari-time-slicer-0.5.0-pyhd8ed1ab_0.conda,conda,0.5.0,conda-forge,['main'],conda,noarch/napari-time-slicer-0.5.0-pyha07c04f_1.conda,None-any-None,False,noarch,pyha07c04f_1,1.0,"['napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'python >=3.9', 'toolz']",BSD-3-Clause,python,1734595882647.0,2024-12-19 08:12:43.543000+00:00,9074d6cf107f82a08e98dde1c317c3ab,4033e4d832d9a125da0577e70d43f7bb18f2699432b4365b561646c4e123cb63,15561.0,conda-forge/napari-time-slicer/0.5.0/noarch/napari-time-slicer-0.5.0-pyha07c04f_1.conda,//api.anaconda.org/download/conda-forge/napari-time-slicer/0.5.0/noarch/napari-time-slicer-0.5.0-pyha07c04f_1.conda,conda,0.5.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +379,napari-timelapse-processor,0.0.2,Timelapse Processor,meta plugin to ease processing timelapse image data,Johannes Soltwedel," Copyright (c) 2024, Johannes Soltwedel All rights reserved. @@ -37841,8 +39639,8 @@ SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. -","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'tqdm', 'napari', 'dask', 'distributed', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""']",>=3.9,"['Repository, https://github.com/jo-mueller/napari-timelapse-processor.git']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -362,napari-timeseries-opener-plugin,0.1.8,napari-timeseries-opener-plugin,Simple plugin that opens separate .tif files as a 3-dimensional layer.,Niklas Netter,BSD-3-Clause,https://github.com/gatoniel/napari-timeseries-opener-plugin,62c45e930b3c44567d658a72,['conda'],,https://github.com/gatoniel/napari-timeseries-opener-plugin,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-timeseries-opener-plugin,http://api.anaconda.org/packages/conda-forge/napari-timeseries-opener-plugin,http://anaconda.org/conda-forge/napari-timeseries-opener-plugin,"['0.1.2', '0.1.7', '0.1.8']",0.1.8,0.1.8,['noarch'],5.0,,['pyhd8ed1ab_0'],0.1.2,conda-forge/napari-timeseries-opener-plugin/0.1.2,1.0,0.0,2022-07-05 15:53:52.527000+00:00,2023-06-18 08:42:01.710000+00:00,conda,noarch/napari-timeseries-opener-plugin-0.1.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'qtpy']",noarch,1657036292724.0,None-any-None,pyhd8ed1ab_0,2022-07-05 15:53:53.064000+00:00,68ada6fc685c2c983342326cd0438c1f,None,10007.0,conda-forge/napari-timeseries-opener-plugin/0.1.2/noarch/napari-timeseries-opener-plugin-0.1.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-timeseries-opener-plugin/0.1.2/noarch/napari-timeseries-opener-plugin-0.1.2-pyhd8ed1ab_0.tar.bz2,conda,0.1.2,conda-forge,['main'],public,,0.2.1,napari-timeseries-opener-plugin.LoadWidget,LoadWidget,napari_timeseries_opener_plugin._dock_widget:LoadWidget,,,,2.1,napari-timeseries-opener-plugin,0.1.8,,Simple plugin that opens separate .tif files as a 3-dimensional layer.,"# napari-timeseries-opener-plugin +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'tqdm', 'napari', 'dask', 'distributed', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""']",>=3.9,"['Repository, https://github.com/jo-mueller/napari-timelapse-processor.git']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +380,napari-timeseries-opener-plugin,0.1.8,napari-timeseries-opener-plugin,Simple plugin that opens separate .tif files as a 3-dimensional layer.,Niklas Netter,BSD-3-Clause,https://github.com/gatoniel/napari-timeseries-opener-plugin,62c45e930b3c44567d658a72,['conda'],,https://github.com/gatoniel/napari-timeseries-opener-plugin,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-timeseries-opener-plugin,http://api.anaconda.org/packages/conda-forge/napari-timeseries-opener-plugin,http://anaconda.org/conda-forge/napari-timeseries-opener-plugin,"['0.1.2', '0.1.7', '0.1.8']",0.1.8,0.1.8,['noarch'],5.0,,['pyhd8ed1ab_0'],0.1.2,conda-forge/napari-timeseries-opener-plugin/0.1.2,1.0,0.0,2022-07-05 15:53:52.527000+00:00,2023-06-18 08:42:01.710000+00:00,conda,noarch/napari-timeseries-opener-plugin-0.1.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'qtpy']",noarch,1657036292724.0,None-any-None,pyhd8ed1ab_0,2022-07-05 15:53:53.064000+00:00,68ada6fc685c2c983342326cd0438c1f,None,10007.0,conda-forge/napari-timeseries-opener-plugin/0.1.2/noarch/napari-timeseries-opener-plugin-0.1.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-timeseries-opener-plugin/0.1.2/noarch/napari-timeseries-opener-plugin-0.1.2-pyhd8ed1ab_0.tar.bz2,conda,0.1.2,conda-forge,['main'],public,,0.2.1,napari-timeseries-opener-plugin.LoadWidget,LoadWidget,napari_timeseries_opener_plugin._dock_widget:LoadWidget,,,,2.1,napari-timeseries-opener-plugin,0.1.8,,Simple plugin that opens separate .tif files as a 3-dimensional layer.,"# napari-timeseries-opener-plugin [![License](https://img.shields.io/pypi/l/napari-timeseries-opener-plugin.svg?color=green)](https://github.com/gatoniel/napari-timeseries-opener-plugin/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-timeseries-opener-plugin.svg?color=green)](https://pypi.org/project/napari-timeseries-opener-plugin) @@ -37916,8 +39714,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/gatoniel/napari-timeseries-opener-plugin,Niklas Netter,niknett@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'qtpy', 'magicgui', 'tifffile', 'stardist', 'tensorflow']",>=3.7,"['Bug Tracker, https://github.com/gatoniel/napari-timeseries-opener-plugin/issues', 'Documentation, https://github.com/gatoniel/napari-timeseries-opener-plugin#README.md', 'Source Code, https://github.com/gatoniel/napari-timeseries-opener-plugin', 'User Support, https://github.com/gatoniel/napari-timeseries-opener-plugin/issues']",,True,0.1.7,conda-forge/napari-timeseries-opener-plugin/0.1.7,0.1.8,conda-forge/napari-timeseries-opener-plugin/0.1.8,,,conda,noarch/napari-timeseries-opener-plugin-0.1.7-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['csbdeep', 'magicgui', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'qtpy', 'stardist', 'tifffile']",pyhd8ed1ab_0,1660341448514.0,None-any-None,noarch,2022-08-12 22:00:41.802000+00:00,4c6756c5e25065c4ac0dc08f111248dc,None,10669.0,conda-forge/napari-timeseries-opener-plugin/0.1.7/noarch/napari-timeseries-opener-plugin-0.1.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-timeseries-opener-plugin/0.1.7/noarch/napari-timeseries-opener-plugin-0.1.7-pyhd8ed1ab_0.tar.bz2,conda,0.1.7,conda-forge,['main'],conda,noarch/napari-timeseries-opener-plugin-0.1.8-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['csbdeep', 'magicgui', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'qtpy', 'stardist', 'tifffile']",noarch,1666567528133.0,None-any-None,pyhd8ed1ab_0,2022-10-23 23:28:34.185000+00:00,6e3a23e96500928abfaa6e8245d20732,None,10467.0,conda-forge/napari-timeseries-opener-plugin/0.1.8/noarch/napari-timeseries-opener-plugin-0.1.8-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-timeseries-opener-plugin/0.1.8/noarch/napari-timeseries-opener-plugin-0.1.8-pyhd8ed1ab_0.tar.bz2,conda,0.1.8,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-timeseries-opener-plugin.LoadWidget,LoadWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -363,napari-tissuumaps,1.1.2,Napari TissUUmaps,A plugin to export Napari projects to TissUUmaps.,Nicolas Pielawski,MIT,,62050fc63e9442d67a71112d,['conda'],,https://github.com/TissUUmaps/napari-tissuumaps,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-tissuumaps,http://api.anaconda.org/packages/conda-forge/napari-tissuumaps,http://anaconda.org/conda-forge/napari-tissuumaps,['0.2.0'],0.2.0,0.2.0,['noarch'],3.0,,['pyhd8ed1ab_0'],0.2.0,conda-forge/napari-tissuumaps/0.2.0,1.0,0.0,2022-02-10 13:14:42.611000+00:00,2023-06-18 08:40:49.233000+00:00,conda,noarch/napari-tissuumaps-0.2.0-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7']",noarch,1644498732716.0,None-any-None,pyhd8ed1ab_0,2022-02-10 13:14:42.878000+00:00,e45b7738acd24bb2712c6e10114d75f8,None,14958.0,conda-forge/napari-tissuumaps/0.2.0/noarch/napari-tissuumaps-0.2.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-tissuumaps/0.2.0/noarch/napari-tissuumaps-0.2.0-pyhd8ed1ab_0.tar.bz2,conda,0.2.0,conda-forge,['main'],public,,0.2.1,napari-tissuumaps.write_layers,Export layers as a TissUUmaps project,napari_tissuumaps._writer:write_layers,,,,2.1,napari-tissuumaps,1.1.2,,A plugin to export Napari projects to TissUUmaps.,"# 🏝 napari-tissuumaps 🧫 +",text/markdown,https://github.com/gatoniel/napari-timeseries-opener-plugin,Niklas Netter,niknett@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'qtpy', 'magicgui', 'tifffile', 'stardist', 'tensorflow']",>=3.7,"['Bug Tracker, https://github.com/gatoniel/napari-timeseries-opener-plugin/issues', 'Documentation, https://github.com/gatoniel/napari-timeseries-opener-plugin#README.md', 'Source Code, https://github.com/gatoniel/napari-timeseries-opener-plugin', 'User Support, https://github.com/gatoniel/napari-timeseries-opener-plugin/issues']",,True,0.1.7,conda-forge/napari-timeseries-opener-plugin/0.1.7,0.1.8,conda-forge/napari-timeseries-opener-plugin/0.1.8,,,conda,noarch/napari-timeseries-opener-plugin-0.1.7-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['csbdeep', 'magicgui', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'qtpy', 'stardist', 'tifffile']",pyhd8ed1ab_0,1660341448514.0,None-any-None,noarch,2022-08-12 22:00:41.802000+00:00,4c6756c5e25065c4ac0dc08f111248dc,None,10669.0,conda-forge/napari-timeseries-opener-plugin/0.1.7/noarch/napari-timeseries-opener-plugin-0.1.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-timeseries-opener-plugin/0.1.7/noarch/napari-timeseries-opener-plugin-0.1.7-pyhd8ed1ab_0.tar.bz2,conda,0.1.7,conda-forge,['main'],conda,noarch/napari-timeseries-opener-plugin-0.1.8-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['csbdeep', 'magicgui', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'qtpy', 'stardist', 'tifffile']",noarch,1666567528133.0,None-any-None,pyhd8ed1ab_0,2022-10-23 23:28:34.185000+00:00,6e3a23e96500928abfaa6e8245d20732,None,10467.0,conda-forge/napari-timeseries-opener-plugin/0.1.8/noarch/napari-timeseries-opener-plugin-0.1.8-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-timeseries-opener-plugin/0.1.8/noarch/napari-timeseries-opener-plugin-0.1.8-pyhd8ed1ab_0.tar.bz2,conda,0.1.8,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-timeseries-opener-plugin.LoadWidget,LoadWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +381,napari-tissuumaps,1.1.2,Napari TissUUmaps,A plugin to export Napari projects to TissUUmaps.,Nicolas Pielawski,MIT,,62050fc63e9442d67a71112d,['conda'],,https://github.com/TissUUmaps/napari-tissuumaps,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-tissuumaps,http://api.anaconda.org/packages/conda-forge/napari-tissuumaps,http://anaconda.org/conda-forge/napari-tissuumaps,['0.2.0'],0.2.0,0.2.0,['noarch'],3.0,,['pyhd8ed1ab_0'],0.2.0,conda-forge/napari-tissuumaps/0.2.0,1.0,0.0,2022-02-10 13:14:42.611000+00:00,2023-06-18 08:40:49.233000+00:00,conda,noarch/napari-tissuumaps-0.2.0-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7']",noarch,1644498732716.0,None-any-None,pyhd8ed1ab_0,2022-02-10 13:14:42.878000+00:00,e45b7738acd24bb2712c6e10114d75f8,None,14958.0,conda-forge/napari-tissuumaps/0.2.0/noarch/napari-tissuumaps-0.2.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-tissuumaps/0.2.0/noarch/napari-tissuumaps-0.2.0-pyhd8ed1ab_0.tar.bz2,conda,0.2.0,conda-forge,['main'],public,,0.2.1,napari-tissuumaps.write_layers,Export layers as a TissUUmaps project,napari_tissuumaps._writer:write_layers,,,,2.1,napari-tissuumaps,1.1.2,,A plugin to export Napari projects to TissUUmaps.,"# 🏝 napari-tissuumaps 🧫 [![License MIT](https://img.shields.io/pypi/l/napari-tissuumaps.svg?color=green)](https://github.com/npielawski/napari-tissuumaps/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-tissuumaps.svg?color=green)](https://pypi.org/project/napari-tissuumaps) @@ -38008,11 +39806,34 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,,Nicolas Pielawski,nicolas@pielawski.fr,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', ""napari ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""tox ; extra == 'testing'""]",>=3.8,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-tissuumaps.write_layers,"['image*', 'labels*', 'points*', 'shapes*']",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['.tmap'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -364,napari-tomocube-data-viewer,2024.4,Tomocube data viewer,"""A plugin to visualize three-dimensional data from Tomocube's microscopy""",Dohyeon Lee,MIT,https://github.com/ehgus/napari-tomocube-data-viewer,6440566512ab8ac4c6c2a6e2,['conda'],,https://github.com/ehgus/napari-tomocube-data-viewer,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-tomocube-data-viewer,http://api.anaconda.org/packages/conda-forge/napari-tomocube-data-viewer,http://anaconda.org/conda-forge/napari-tomocube-data-viewer,"['2023.3', '2023.8', '2023.11', '2024.2', '2024.4']",2024.4,2024.4,['noarch'],15.0,https://github.com/ehgus/napari-tomocube-data-viewer,['pyhd8ed1ab_0'],2023.3,conda-forge/napari-tomocube-data-viewer/2023.3,1.0,0.0,2023-04-19 21:00:19.711000+00:00,2024-04-01 06:57:56.186000+00:00,conda,noarch/napari-tomocube-data-viewer-2023.3-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['numpy', 'python >=3.8', 'tcfile']",noarch,1681937969057.0,None-any-None,pyhd8ed1ab_0,2023-04-19 21:00:19.972000+00:00,1fe7aa48d5c72f1fbab0a3b99738981d,9dd507ec3e8980e5da1db4fbaa093ba02fc9ab90bf7dc100527f6c7b7cda917b,11627.0,conda-forge/napari-tomocube-data-viewer/2023.3/noarch/napari-tomocube-data-viewer-2023.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-tomocube-data-viewer/2023.3/noarch/napari-tomocube-data-viewer-2023.3-pyhd8ed1ab_0.conda,conda,2023.3,conda-forge,['main'],public,,0.2.1,napari-tomocube-data-viewer.get_reader,Open data with Tomocube data viewer,napari_tomocube_data_viewer._reader:napari_get_reader,napari-tomocube-data-viewer.get_reader,['*.TCF'],False,2.1,napari-tomocube-data-viewer,2024.4,,"""A plugin to visualize three-dimensional data from Tomocube's microscopy""","# napari-tomocube-data-viewer +",text/markdown,,Nicolas Pielawski,nicolas@pielawski.fr,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', ""napari ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""tox ; extra == 'testing'""]",>=3.8,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-tissuumaps.write_layers,"['image*', 'labels*', 'points*', 'shapes*']",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['.tmap'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +382,napari-tomocube-data-viewer,2024.10.0,Tomocube data viewer,A plugin to visualize three-dimensional data from Tomocube's microscopy,," +The MIT License (MIT) + +Copyright (c) 2023 Dohyeon Lee + +Permission is hereby granted, free of charge, to any person obtaining a copy +of this software and associated documentation files (the ""Software""), to deal +in the Software without restriction, including without limitation the rights +to use, copy, modify, merge, publish, distribute, sublicense, and/or sell +copies of the Software, and to permit persons to whom the Software is +furnished to do so, subject to the following conditions: + +The above copyright notice and this permission notice shall be included in +all copies or substantial portions of the Software. + +THE SOFTWARE IS PROVIDED ""AS IS"", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR +IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, +FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE +AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER +LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, +OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN +THE SOFTWARE. +",,6440566512ab8ac4c6c2a6e2,['conda'],,https://github.com/ehgus/napari-tomocube-data-viewer,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-tomocube-data-viewer,http://api.anaconda.org/packages/conda-forge/napari-tomocube-data-viewer,http://anaconda.org/conda-forge/napari-tomocube-data-viewer,"['2023.3', '2023.8', '2023.11', '2024.2', '2024.4', '2024.10.0']",2024.10.0,2024.10.0,['noarch'],19.0,https://github.com/ehgus/napari-tomocube-data-viewer,"['pyha07c04f_0', 'pyhd8ed1ab_0']",2023.3,conda-forge/napari-tomocube-data-viewer/2023.3,1.0,0.0,2023-04-19 21:00:19.711000+00:00,2024-10-16 04:35:02.611000+00:00,conda,noarch/napari-tomocube-data-viewer-2023.3-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['numpy', 'python >=3.8', 'tcfile']",noarch,1681937969057.0,None-any-None,pyhd8ed1ab_0,2023-04-19 21:00:19.972000+00:00,1fe7aa48d5c72f1fbab0a3b99738981d,9dd507ec3e8980e5da1db4fbaa093ba02fc9ab90bf7dc100527f6c7b7cda917b,11627.0,conda-forge/napari-tomocube-data-viewer/2023.3/noarch/napari-tomocube-data-viewer-2023.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-tomocube-data-viewer/2023.3/noarch/napari-tomocube-data-viewer-2023.3-pyhd8ed1ab_0.conda,conda,2023.3,conda-forge,['main'],public,,0.2.1,napari-tomocube-data-viewer.get_reader,Open data with Tomocube data viewer,napari_tomocube_data_viewer._reader:napari_get_reader,napari-tomocube-data-viewer.get_reader,['*.TCF'],False,2.1,napari-tomocube-data-viewer,2024.10.0,,A plugin to visualize three-dimensional data from Tomocube's microscopy,"# napari-tomocube-data-viewer [![License MIT](https://img.shields.io/badge/License-MIT-yellow.svg)](https://github.com/ehgus/napari-tomocube-data-viewer/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-tomocube-data-viewer.svg?color=green)](https://pypi.org/project/napari-tomocube-data-viewer) +[![Python Version](https://img.shields.io/pypi/pyversions/napari-tomocube-data-viewer.svg?color=green)](https://python.org) [![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-tomocube-data-viewer)](https://napari-hub.org/plugins/napari-tomocube-data-viewer) A plugin to visualize three-dimensional data from [Tomocube](https://www.tomocube.com/)'s holotomography @@ -38036,6 +39857,10 @@ You can install `napari-tomocube-data-viewer` via [pip] or [conda]: pip install napari-tomocube-data-viewer conda install napari-tomocube-data-viewer +To install latest development version : + + pip install git+https://github.com/ehgus/napari-tomocube-data-viewer.git + ## Contributing Contributions are very welcome. Tests can be run with [tox], please ensure @@ -38059,8 +39884,31 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [conda]: https://docs.anaconda.com/free/miniconda/index.html [file an issue]: https://github.com/ehgus/napari-tomocube-data-viewer/issues -",text/markdown,https://github.com/ehgus/napari-tomocube-data-viewer,Dohyeon Lee,dleh428@kaist.ac.kr,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'TCFile', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/ehgus/napari-tomocube-data-viewer/issues', 'Documentation, https://github.com/ehgus/napari-tomocube-data-viewer #README.md', 'Source Code, https://github.com/ehgus/napari-tomocube-data-viewer', 'User Support, https://github.com/ehgus/napari-tomocube-data-viewer/issues']",['testing'],False,2023.8,conda-forge/napari-tomocube-data-viewer/2023.8,2023.11,conda-forge/napari-tomocube-data-viewer/2023.11,2024.2,conda-forge/napari-tomocube-data-viewer/2024.2,conda,noarch/napari-tomocube-data-viewer-2023.8-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['numpy', 'python >=3.8', 'tcfile']",pyhd8ed1ab_0,1693309366732.0,None-any-None,noarch,2023-08-29 11:43:42.122000+00:00,decb73250a40beeb0c633225642f7b02,76da5c8aba5ad95e308af930ffd8d3ee097f63456c421f3ff845231a17c96bd6,11679.0,conda-forge/napari-tomocube-data-viewer/2023.8/noarch/napari-tomocube-data-viewer-2023.8-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-tomocube-data-viewer/2023.8/noarch/napari-tomocube-data-viewer-2023.8-pyhd8ed1ab_0.conda,conda,2023.8,conda-forge,['main'],conda,noarch/napari-tomocube-data-viewer-2023.11-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['numpy', 'python >=3.8', 'tcfile <=2023.7']",noarch,1700679706197.0,None-any-None,pyhd8ed1ab_0,2023-11-22 19:02:42.943000+00:00,eb5c517f5e99a3ddc59e93b5f647444a,af5af68a9a6c0c0a2478835d7761e46792a9eab099e5e1eb05f66897abd2d31a,11762.0,conda-forge/napari-tomocube-data-viewer/2023.11/noarch/napari-tomocube-data-viewer-2023.11-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-tomocube-data-viewer/2023.11/noarch/napari-tomocube-data-viewer-2023.11-pyhd8ed1ab_0.conda,conda,2023.11,conda-forge,['main'],conda,noarch/napari-tomocube-data-viewer-2024.2-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['numpy', 'python >=3.8', 'tcfile <=2023.7']",MIT,python,1708340442908.0,2024-02-19 11:01:29.596000+00:00,091904a0c205379cce38947f1736e170,cc284ef95306ff3a652ab98a54000846aee0329bcaa54150f7ef39a5cd8ded0b,11846.0,conda-forge/napari-tomocube-data-viewer/2024.2/noarch/napari-tomocube-data-viewer-2024.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-tomocube-data-viewer/2024.2/noarch/napari-tomocube-data-viewer-2024.2-pyhd8ed1ab_0.conda,conda,2024.2,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,2024.4,conda-forge/napari-tomocube-data-viewer/2024.4,,,,,conda,noarch/napari-tomocube-data-viewer-2024.4-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['numpy', 'python >=3.8', 'tcfile <=2023.7']",noarch,1711954628978.0,None-any-None,pyhd8ed1ab_0,2024-04-01 06:57:53.866000+00:00,9a258b0c4990f3eb6a2503be4c75f05c,b6d9ebcb364601bd557a0c80c63b51c534ffc3b510867af7a060a693d60f9ef3,11817.0,conda-forge/napari-tomocube-data-viewer/2024.4/noarch/napari-tomocube-data-viewer-2024.4-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-tomocube-data-viewer/2024.4/noarch/napari-tomocube-data-viewer-2024.4-pyhd8ed1ab_0.conda,conda,2024.4,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -365,napari-tomodl,0.1.17,ToMoDL Reconstruction,A plugin for optical projection tomography reconstruction with model-based neural networks.,"Marcos Antonio Obando, Germán Mato, Teresa Correia",MIT,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-tomodl.make_reconstruct_widget,Reconstruct OPT data with ToMoDL,napari_tomodl._reconstruction_widget:ReconstructionWidget,,,,2.1,napari-tomodl,0.1.17,,A plugin for optical projection tomography reconstruction with model-based neural networks.,"# napari-tomodl +[PyPI]: https://pypi.org/ +",text/markdown,,,Dohyeon Lee ," +The MIT License (MIT) + +Copyright (c) 2023 Dohyeon Lee + +Permission is hereby granted, free of charge, to any person obtaining a copy +of this software and associated documentation files (the ""Software""), to deal +in the Software without restriction, including without limitation the rights +to use, copy, modify, merge, publish, distribute, sublicense, and/or sell +copies of the Software, and to permit persons to whom the Software is +furnished to do so, subject to the following conditions: + +The above copyright notice and this permission notice shall be included in +all copies or substantial portions of the Software. + +THE SOFTWARE IS PROVIDED ""AS IS"", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR +IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, +FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE +AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER +LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, +OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN +THE SOFTWARE. +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'TCFile>=2024.10.1', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""']",>=3.8,"['Bug Tracker, https://github.com/ehgus/napari-tomocube-data-viewer/issues', 'Documentation, https://github.com/ehgus/napari-tomocube-data-viewer', 'Source Code, https://github.com/ehgus/napari-tomocube-data-viewer', 'User Support, https://github.com/ehgus/napari-tomocube-data-viewer/issues']",['testing'],False,2023.8,conda-forge/napari-tomocube-data-viewer/2023.8,2023.11,conda-forge/napari-tomocube-data-viewer/2023.11,2024.2,conda-forge/napari-tomocube-data-viewer/2024.2,conda,noarch/napari-tomocube-data-viewer-2023.8-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['numpy', 'python >=3.8', 'tcfile']",pyhd8ed1ab_0,1693309366732.0,None-any-None,noarch,2023-08-29 11:43:42.122000+00:00,decb73250a40beeb0c633225642f7b02,76da5c8aba5ad95e308af930ffd8d3ee097f63456c421f3ff845231a17c96bd6,11679.0,conda-forge/napari-tomocube-data-viewer/2023.8/noarch/napari-tomocube-data-viewer-2023.8-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-tomocube-data-viewer/2023.8/noarch/napari-tomocube-data-viewer-2023.8-pyhd8ed1ab_0.conda,conda,2023.8,conda-forge,['main'],conda,noarch/napari-tomocube-data-viewer-2023.11-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['numpy', 'python >=3.8', 'tcfile <=2023.7']",noarch,1700679706197.0,None-any-None,pyhd8ed1ab_0,2023-11-22 19:02:42.943000+00:00,eb5c517f5e99a3ddc59e93b5f647444a,af5af68a9a6c0c0a2478835d7761e46792a9eab099e5e1eb05f66897abd2d31a,11762.0,conda-forge/napari-tomocube-data-viewer/2023.11/noarch/napari-tomocube-data-viewer-2023.11-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-tomocube-data-viewer/2023.11/noarch/napari-tomocube-data-viewer-2023.11-pyhd8ed1ab_0.conda,conda,2023.11,conda-forge,['main'],conda,noarch/napari-tomocube-data-viewer-2024.2-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['numpy', 'python >=3.8', 'tcfile <=2023.7']",MIT,python,1708340442908.0,2024-02-19 11:01:29.596000+00:00,091904a0c205379cce38947f1736e170,cc284ef95306ff3a652ab98a54000846aee0329bcaa54150f7ef39a5cd8ded0b,11846.0,conda-forge/napari-tomocube-data-viewer/2024.2/noarch/napari-tomocube-data-viewer-2024.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-tomocube-data-viewer/2024.2/noarch/napari-tomocube-data-viewer-2024.2-pyhd8ed1ab_0.conda,conda,2024.2,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,2024.4,conda-forge/napari-tomocube-data-viewer/2024.4,2024.10.0,conda-forge/napari-tomocube-data-viewer/2024.10.0,,,conda,noarch/napari-tomocube-data-viewer-2024.4-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['numpy', 'python >=3.8', 'tcfile <=2023.7']",noarch,1711954628978.0,None-any-None,pyhd8ed1ab_0,2024-04-01 06:57:53.866000+00:00,9a258b0c4990f3eb6a2503be4c75f05c,b6d9ebcb364601bd557a0c80c63b51c534ffc3b510867af7a060a693d60f9ef3,11817.0,conda-forge/napari-tomocube-data-viewer/2024.4/noarch/napari-tomocube-data-viewer-2024.4-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-tomocube-data-viewer/2024.4/noarch/napari-tomocube-data-viewer-2024.4-pyhd8ed1ab_0.conda,conda,2024.4,conda-forge,['main'],conda,noarch/napari-tomocube-data-viewer-2024.10.0-pyha07c04f_0.conda,0.0,MIT,False,python,"['numpy', 'python >=3.8', 'tcfile 2024.10.1']",noarch,1729053226631.0,None-any-None,pyha07c04f_0,2024-10-16 04:34:59.374000+00:00,dacd6fa9e01bf27ce36c4b9121f70c89,6a5a463d77da827d12c8af1ff916876dede77e9f1bd520ae40fe7cfa02333cf7,11875.0,conda-forge/napari-tomocube-data-viewer/2024.10.0/noarch/napari-tomocube-data-viewer-2024.10.0-pyha07c04f_0.conda,//api.anaconda.org/download/conda-forge/napari-tomocube-data-viewer/2024.10.0/noarch/napari-tomocube-data-viewer-2024.10.0-pyha07c04f_0.conda,conda,2024.10.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +383,napari-tomodl,0.1.17,ToMoDL Reconstruction,A plugin for optical projection tomography reconstruction with model-based neural networks.,"Marcos Antonio Obando, Germán Mato, Teresa Correia",MIT,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-tomodl.make_reconstruct_widget,Reconstruct OPT data with ToMoDL,napari_tomodl._reconstruction_widget:ReconstructionWidget,,,,2.1,napari-tomodl,0.1.17,,A plugin for optical projection tomography reconstruction with model-based neural networks.,"# napari-tomodl [![License MIT](https://img.shields.io/pypi/l/napari-tomodl.svg?color=green)](https://github.com/marcoso96/napari-tomodl/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-tomodl.svg?color=green)](https://pypi.org/project/napari-tomodl) @@ -38155,8 +40003,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,,"Marcos Antonio Obando, Germán Mato, Teresa Correia",marcos.obando@ib.edu.ar,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['magicgui', 'qtpy', 'napari[all]', 'pyqt5', 'phantominator', 'opencv-python', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",<=3.9,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-tomodl.make_reconstruct_widget,OPT reconstruction,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -366,napari-tomoslice,0.0.7,napari-tomoslice,A napari plugin for interacting with electron cryotomograms,Alister Burt,BSD-3-Clause,https://github.com/alisterburt/napari-tomoslice,61fa78ae86b0cbb1311bba6a,['conda'],,https://github.com/alisterburt/napari-tomoslice,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-tomoslice,http://api.anaconda.org/packages/conda-forge/napari-tomoslice,http://anaconda.org/conda-forge/napari-tomoslice,['0.0.7'],0.0.7,0.0.7,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.7,conda-forge/napari-tomoslice/0.0.7,1.0,0.0,2022-02-02 12:27:23.368000+00:00,2023-06-18 08:40:41.109000+00:00,conda,noarch/napari-tomoslice-0.0.7-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['mrcfile', 'napari 0.4.12', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'typer']",noarch,1643804664417.0,None-any-None,pyhd8ed1ab_0,2022-02-02 12:27:24.297000+00:00,b290cf71dc1be97ce72951500b927659,None,15373.0,conda-forge/napari-tomoslice/0.0.7/noarch/napari-tomoslice-0.0.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-tomoslice/0.0.7/noarch/napari-tomoslice-0.0.7-pyhd8ed1ab_0.tar.bz2,conda,0.0.7,conda-forge,['main'],public,,0.2.0,napari-tomoslice.TomoSliceWidget,TomoSliceWidget,napari_tomoslice._qt.tomoslice:TomoSliceWidget,,,,2.1,napari-tomoslice,0.0.7,['UNKNOWN'],A napari plugin for interacting with electron cryotomograms,"# napari-tomoslice +",text/markdown,,"Marcos Antonio Obando, Germán Mato, Teresa Correia",marcos.obando@ib.edu.ar,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['magicgui', 'qtpy', 'napari[all]', 'pyqt5', 'phantominator', 'opencv-python', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",<=3.9,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-tomodl.make_reconstruct_widget,OPT reconstruction,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +384,napari-tomoslice,0.0.7,napari-tomoslice,A napari plugin for interacting with electron cryotomograms,Alister Burt,BSD-3-Clause,https://github.com/alisterburt/napari-tomoslice,61fa78ae86b0cbb1311bba6a,['conda'],,https://github.com/alisterburt/napari-tomoslice,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-tomoslice,http://api.anaconda.org/packages/conda-forge/napari-tomoslice,http://anaconda.org/conda-forge/napari-tomoslice,['0.0.7'],0.0.7,0.0.7,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.7,conda-forge/napari-tomoslice/0.0.7,1.0,0.0,2022-02-02 12:27:23.368000+00:00,2023-06-18 08:40:41.109000+00:00,conda,noarch/napari-tomoslice-0.0.7-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['mrcfile', 'napari 0.4.12', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'typer']",noarch,1643804664417.0,None-any-None,pyhd8ed1ab_0,2022-02-02 12:27:24.297000+00:00,b290cf71dc1be97ce72951500b927659,None,15373.0,conda-forge/napari-tomoslice/0.0.7/noarch/napari-tomoslice-0.0.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-tomoslice/0.0.7/noarch/napari-tomoslice-0.0.7-pyhd8ed1ab_0.tar.bz2,conda,0.0.7,conda-forge,['main'],public,,0.2.0,napari-tomoslice.TomoSliceWidget,TomoSliceWidget,napari_tomoslice._qt.tomoslice:TomoSliceWidget,,,,2.1,napari-tomoslice,0.0.7,['UNKNOWN'],A napari plugin for interacting with electron cryotomograms,"# napari-tomoslice [![License](https://img.shields.io/pypi/l/napari-tomoslice.svg?color=green)](https://github.com/alisterburt/napari-tomoslice/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-tomoslice.svg?color=green)](https://pypi.org/project/napari-tomoslice) @@ -38237,8 +40085,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/alisterburt/napari-tomoslice,Alister Burt,alisterburt@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari (==0.4.12)', 'mrcfile', 'typer']",>=3.7,"['Bug Tracker, https://github.com/alisterburt/napari-tomoslice/issues', 'Documentation, https://github.com/alisterburt/napari-tomoslice#README.md', 'Source Code, https://github.com/alisterburt/napari-tomoslice', 'User Support, https://github.com/alisterburt/napari-tomoslice/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-tomoslice.TomoSliceWidget,TomoSliceWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -367,napari-tomotwin,0.4.0,TomoTwin,Several tools for the work with TomoTwin,Thorsten Wagner,MPL-2.0,https://github.com/MPI-Dortmund/napari-tomotwin,642db7b83639b3445ed5d46a,['conda'],,https://github.com/MPI-Dortmund/napari-tomotwin,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-tomotwin,http://api.anaconda.org/packages/conda-forge/napari-tomotwin,http://anaconda.org/conda-forge/napari-tomotwin,"['0.1.1', '0.1.2', '0.1.3', '0.1.5', '0.2.0', '0.2.1', '0.2.2', '0.2.5']",0.2.5,0.2.5,['noarch'],17.0,https://github.com/MPI-Dortmund/napari-tomotwin,['pyhd8ed1ab_0'],0.1.1,conda-forge/napari-tomotwin/0.1.1,1.0,0.0,2023-04-05 18:02:29.007000+00:00,2023-12-08 23:22:44.398000+00:00,conda,noarch/napari-tomotwin-0.1.1-pyhd8ed1ab_0.conda,0.0,MPL-2.0,False,python,"['matplotlib-base', 'numpy', 'pandas', 'python >=3.10', 'tqdm']",noarch,1680717695982.0,None-any-None,pyhd8ed1ab_0,2023-04-05 18:02:29.451000+00:00,ad3db896d1d253426da0c88efa07b319,05e025bbe10fc35c3c41a4bd7dcd5092b48be605196bbac3a06107f837e38301,16209.0,conda-forge/napari-tomotwin/0.1.1/noarch/napari-tomotwin-0.1.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-tomotwin/0.1.1/noarch/napari-tomotwin-0.1.1-pyhd8ed1ab_0.conda,conda,0.1.1,conda-forge,['main'],public,,0.2.1,napari-tomotwin.UmapTool,Refine umap,napari_tomotwin.load_umap_widget:UmapToolQt,,,,2.1,napari-tomotwin,0.4.0,,Several tools for the work with TomoTwin,"# napari-tomotwin +",text/markdown,https://github.com/alisterburt/napari-tomoslice,Alister Burt,alisterburt@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari (==0.4.12)', 'mrcfile', 'typer']",>=3.7,"['Bug Tracker, https://github.com/alisterburt/napari-tomoslice/issues', 'Documentation, https://github.com/alisterburt/napari-tomoslice#README.md', 'Source Code, https://github.com/alisterburt/napari-tomoslice', 'User Support, https://github.com/alisterburt/napari-tomoslice/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-tomoslice.TomoSliceWidget,TomoSliceWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +385,napari-tomotwin,0.4.1,TomoTwin,Several tools for the work with TomoTwin,Thorsten Wagner,MPL-2.0,https://github.com/MPI-Dortmund/napari-tomotwin,642db7b83639b3445ed5d46a,['conda'],,https://github.com/MPI-Dortmund/napari-tomotwin,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-tomotwin,http://api.anaconda.org/packages/conda-forge/napari-tomotwin,http://anaconda.org/conda-forge/napari-tomotwin,"['0.1.1', '0.1.2', '0.1.3', '0.1.5', '0.2.0', '0.2.1', '0.2.2', '0.2.5']",0.2.5,0.2.5,['noarch'],17.0,https://github.com/MPI-Dortmund/napari-tomotwin,['pyhd8ed1ab_0'],0.1.1,conda-forge/napari-tomotwin/0.1.1,1.0,0.0,2023-04-05 18:02:29.007000+00:00,2023-12-08 23:22:44.398000+00:00,conda,noarch/napari-tomotwin-0.1.1-pyhd8ed1ab_0.conda,0.0,MPL-2.0,False,python,"['matplotlib-base', 'numpy', 'pandas', 'python >=3.10', 'tqdm']",noarch,1680717695982.0,None-any-None,pyhd8ed1ab_0,2023-04-05 18:02:29.451000+00:00,ad3db896d1d253426da0c88efa07b319,05e025bbe10fc35c3c41a4bd7dcd5092b48be605196bbac3a06107f837e38301,16209.0,conda-forge/napari-tomotwin/0.1.1/noarch/napari-tomotwin-0.1.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-tomotwin/0.1.1/noarch/napari-tomotwin-0.1.1-pyhd8ed1ab_0.conda,conda,0.1.1,conda-forge,['main'],public,,0.2.1,napari-tomotwin.UmapTool,Refine umap,napari_tomotwin.load_umap_widget:UmapToolQt,,,,2.1,napari-tomotwin,0.4.1,,Several tools for the work with TomoTwin,"# napari-tomotwin [![License Mozilla Public License 2.0](https://img.shields.io/pypi/l/napari-tomotwin.svg?color=green)](https://github.com/MPI-Dortmund/napari-tomotwin/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-tomotwin.svg?color=green)](https://pypi.org/project/napari-tomotwin) @@ -38278,8 +40126,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/MPI-Dortmund/napari-tomotwin,Thorsten Wagner,twa1@posteo.de,MPL-2.0,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Mozilla Public License 2.0 (MPL 2.0)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'pandas', 'matplotlib', 'scipy', 'napari-clusters-plotter >=0.7.2', 'magicgui', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.10,,['testing'],False,0.1.2,conda-forge/napari-tomotwin/0.1.2,0.1.3,conda-forge/napari-tomotwin/0.1.3,0.1.5,conda-forge/napari-tomotwin/0.1.5,conda,noarch/napari-tomotwin-0.1.2-pyhd8ed1ab_0.conda,0.0,MPL-2.0,False,python,"['matplotlib-base', 'numpy', 'pandas', 'python >=3.10', 'tqdm']",pyhd8ed1ab_0,1683022599265.0,None-any-None,noarch,2023-05-02 10:17:29.290000+00:00,0c4ab4b8406e58b235fbe934019f8263,7e66baa9efe8fe0cfa23cbe92852e89cce550c8d9eddf8b5abe612af5a8b9bcd,16254.0,conda-forge/napari-tomotwin/0.1.2/noarch/napari-tomotwin-0.1.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-tomotwin/0.1.2/noarch/napari-tomotwin-0.1.2-pyhd8ed1ab_0.conda,conda,0.1.2,conda-forge,['main'],conda,noarch/napari-tomotwin-0.1.3-pyhd8ed1ab_0.conda,0.0,MPL-2.0,False,python,"['matplotlib-base', 'numpy', 'pandas', 'python >=3.10', 'tqdm']",noarch,1683837243956.0,None-any-None,pyhd8ed1ab_0,2023-05-11 20:35:07.138000+00:00,928fc61237135420fc336e057d4e9537,d05f08d72002efcc1a8aabf8ca6e9cdb60eee149395bc436f37a2c9f410f5f17,16284.0,conda-forge/napari-tomotwin/0.1.3/noarch/napari-tomotwin-0.1.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-tomotwin/0.1.3/noarch/napari-tomotwin-0.1.3-pyhd8ed1ab_0.conda,conda,0.1.3,conda-forge,['main'],conda,noarch/napari-tomotwin-0.1.5-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['magicgui', 'matplotlib-base', 'napari', 'napari-clusters-plotter >=0.7.2', 'numpy', 'pandas', 'python >=3.10', 'tqdm']",MPL-2.0,python,1690322387202.0,2023-07-25 22:02:51.130000+00:00,657ec2949da59a729e6db81d7a81e6ec,fac3a77c28dbf1493776258bacc891fd45fa5bd3104d04eeb35467ff68258dc0,16368.0,conda-forge/napari-tomotwin/0.1.5/noarch/napari-tomotwin-0.1.5-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-tomotwin/0.1.5/noarch/napari-tomotwin-0.1.5-pyhd8ed1ab_0.conda,conda,0.1.5,conda-forge,['main'],,,,,,,,,,,napari-tomotwin.UmapTool,TomoTwin clustering workflow,False,,,,,,,,,,,,,,,,,,,,,,,0.2.0,conda-forge/napari-tomotwin/0.2.0,0.2.1,conda-forge/napari-tomotwin/0.2.1,0.2.2,conda-forge/napari-tomotwin/0.2.2,conda,noarch/napari-tomotwin-0.2.0-pyhd8ed1ab_0.conda,0.0,MPL-2.0,False,python,"['magicgui', 'matplotlib-base', 'napari', 'napari-clusters-plotter >=0.7.2', 'numpy', 'pandas', 'python >=3.10', 'scipy']",noarch,1690322883715.0,None-any-None,pyhd8ed1ab_0,2023-07-25 22:10:45.583000+00:00,b6a3c97b63856b0ad9ec3069dda9a49b,c83422919209aad447dab0ebb49f958cb9a099aac3ea1ccf9b98793ed51f3262,17627.0,conda-forge/napari-tomotwin/0.2.0/noarch/napari-tomotwin-0.2.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-tomotwin/0.2.0/noarch/napari-tomotwin-0.2.0-pyhd8ed1ab_0.conda,conda,0.2.0,conda-forge,['main'],conda,noarch/napari-tomotwin-0.2.1-pyhd8ed1ab_0.conda,0.0,MPL-2.0,False,python,"['magicgui', 'matplotlib-base', 'napari', 'napari-clusters-plotter >=0.7.2', 'numpy', 'pandas', 'python >=3.10', 'scipy']",noarch,1694107982313.0,None-any-None,pyhd8ed1ab_0,2023-09-07 17:34:39.664000+00:00,50e0c21fa330684cbc08189b544e0d15,95928593824842d6d80abeb436009c5a5de1a6bbf8d358ba4b459876aca69ce9,17673.0,conda-forge/napari-tomotwin/0.2.1/noarch/napari-tomotwin-0.2.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-tomotwin/0.2.1/noarch/napari-tomotwin-0.2.1-pyhd8ed1ab_0.conda,conda,0.2.1,conda-forge,['main'],conda,noarch/napari-tomotwin-0.2.2-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['magicgui', 'matplotlib-base', 'napari', 'napari-clusters-plotter >=0.7.2', 'numpy', 'pandas', 'python >=3.10', 'scipy']",MPL-2.0,python,1694109313455.0,2023-09-07 17:56:53.091000+00:00,ac2ff3ca4d581a161a6f1a7e84a339b0,73b37955d5c8481467e661b3013f4d3111e90cd6292605ccec24710d8bd858c9,18302.0,conda-forge/napari-tomotwin/0.2.2/noarch/napari-tomotwin-0.2.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-tomotwin/0.2.2/noarch/napari-tomotwin-0.2.2-pyhd8ed1ab_0.conda,conda,0.2.2,conda-forge,['main'],,,,,,,0.2.5,conda-forge/napari-tomotwin/0.2.5,,,conda,noarch/napari-tomotwin-0.2.5-pyhd8ed1ab_0.conda,0.0,MPL-2.0,False,python,"['magicgui', 'matplotlib-base', 'napari', 'napari-clusters-plotter >=0.7.2', 'numpy', 'pandas', 'python >=3.10', 'qtpy', 'scipy']",noarch,1702077626589.0,None-any-None,pyhd8ed1ab_0,2023-12-08 23:22:39.480000+00:00,267367be42712dae947f65e55b5ef24d,7b8985a921f98b5206a18861d9e3fd93f7f6251c8297846a84109c88221122f2,18821.0,conda-forge/napari-tomotwin/0.2.5/noarch/napari-tomotwin-0.2.5-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-tomotwin/0.2.5/noarch/napari-tomotwin-0.2.5-pyhd8ed1ab_0.conda,conda,0.2.5,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -368,napari-toothfairy-annotator,0.0.16,ToothFairy Annotator,The plugin employed to annotate volumes employed in the ToothFairy 2 Challenge,Luca Lumetti,MIT,https://github.com/LucaLumetti/napari-toothfairy-annotator,6616bc3c1d70891bc4d291e6,['conda'],,https://github.com/LucaLumetti/napari-toothfairy-annotator,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-toothfairy-annotator,http://api.anaconda.org/packages/conda-forge/napari-toothfairy-annotator,http://anaconda.org/conda-forge/napari-toothfairy-annotator,"['0.0.5', '0.0.9', '0.0.11', '0.0.12', '0.0.15', '0.0.16']",0.0.16,0.0.16,['noarch'],37.0,,['pyh9208f05_0'],0.0.5,conda-forge/napari-toothfairy-annotator/0.0.5,1.0,0.0,2024-04-10 16:07:21.916000+00:00,2024-04-24 09:56:48.747000+00:00,conda,noarch/napari-toothfairy-annotator-0.0.5-pyh9208f05_0.conda,0.0,MIT,False,python,"['magicgui', 'napari >=0.4.18', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image']",noarch,1712765074406.0,None-any-None,pyh9208f05_0,2024-04-10 16:17:45.449000+00:00,7e8c4e842d4a78eb737b1efba5d21cff,02dd72b6074da83fbec2515461c75a30f2b528616b5eef9ac5b84b6c97dc5760,17511.0,conda-forge/napari-toothfairy-annotator/0.0.5/noarch/napari-toothfairy-annotator-0.0.5-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-toothfairy-annotator/0.0.5/noarch/napari-toothfairy-annotator-0.0.5-pyh9208f05_0.conda,conda,0.0.5,conda-forge,['main'],hidden,,0.2.1,napari-toothfairy-annotator.get_reader,Open data with ToothFairy Annotator,napari_toothfairy_annotator._reader:napari_get_reader,napari-toothfairy-annotator.get_reader,['*'],True,2.1,napari-toothfairy-annotator,0.0.16,,The plugin employed to annotate volumes employed in the ToothFairy 2 Challenge,"# napari-toothfairy-annotator +",text/markdown,https://github.com/MPI-Dortmund/napari-tomotwin,Thorsten Wagner,twa1@posteo.de,MPL-2.0,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Mozilla Public License 2.0 (MPL 2.0)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'pandas', 'matplotlib', 'scipy', 'napari-clusters-plotter>=0.7.2', 'magicgui', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""']",>=3.10,,['testing'],False,0.1.2,conda-forge/napari-tomotwin/0.1.2,0.1.3,conda-forge/napari-tomotwin/0.1.3,0.1.5,conda-forge/napari-tomotwin/0.1.5,conda,noarch/napari-tomotwin-0.1.2-pyhd8ed1ab_0.conda,0.0,MPL-2.0,False,python,"['matplotlib-base', 'numpy', 'pandas', 'python >=3.10', 'tqdm']",pyhd8ed1ab_0,1683022599265.0,None-any-None,noarch,2023-05-02 10:17:29.290000+00:00,0c4ab4b8406e58b235fbe934019f8263,7e66baa9efe8fe0cfa23cbe92852e89cce550c8d9eddf8b5abe612af5a8b9bcd,16254.0,conda-forge/napari-tomotwin/0.1.2/noarch/napari-tomotwin-0.1.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-tomotwin/0.1.2/noarch/napari-tomotwin-0.1.2-pyhd8ed1ab_0.conda,conda,0.1.2,conda-forge,['main'],conda,noarch/napari-tomotwin-0.1.3-pyhd8ed1ab_0.conda,0.0,MPL-2.0,False,python,"['matplotlib-base', 'numpy', 'pandas', 'python >=3.10', 'tqdm']",noarch,1683837243956.0,None-any-None,pyhd8ed1ab_0,2023-05-11 20:35:07.138000+00:00,928fc61237135420fc336e057d4e9537,d05f08d72002efcc1a8aabf8ca6e9cdb60eee149395bc436f37a2c9f410f5f17,16284.0,conda-forge/napari-tomotwin/0.1.3/noarch/napari-tomotwin-0.1.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-tomotwin/0.1.3/noarch/napari-tomotwin-0.1.3-pyhd8ed1ab_0.conda,conda,0.1.3,conda-forge,['main'],conda,noarch/napari-tomotwin-0.1.5-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['magicgui', 'matplotlib-base', 'napari', 'napari-clusters-plotter >=0.7.2', 'numpy', 'pandas', 'python >=3.10', 'tqdm']",MPL-2.0,python,1690322387202.0,2023-07-25 22:02:51.130000+00:00,657ec2949da59a729e6db81d7a81e6ec,fac3a77c28dbf1493776258bacc891fd45fa5bd3104d04eeb35467ff68258dc0,16368.0,conda-forge/napari-tomotwin/0.1.5/noarch/napari-tomotwin-0.1.5-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-tomotwin/0.1.5/noarch/napari-tomotwin-0.1.5-pyhd8ed1ab_0.conda,conda,0.1.5,conda-forge,['main'],,,,,,,,,,,napari-tomotwin.UmapTool,TomoTwin clustering workflow,False,,,,,,,,,,,,,,,,,,,,,,,0.2.0,conda-forge/napari-tomotwin/0.2.0,0.2.1,conda-forge/napari-tomotwin/0.2.1,0.2.2,conda-forge/napari-tomotwin/0.2.2,conda,noarch/napari-tomotwin-0.2.0-pyhd8ed1ab_0.conda,0.0,MPL-2.0,False,python,"['magicgui', 'matplotlib-base', 'napari', 'napari-clusters-plotter >=0.7.2', 'numpy', 'pandas', 'python >=3.10', 'scipy']",noarch,1690322883715.0,None-any-None,pyhd8ed1ab_0,2023-07-25 22:10:45.583000+00:00,b6a3c97b63856b0ad9ec3069dda9a49b,c83422919209aad447dab0ebb49f958cb9a099aac3ea1ccf9b98793ed51f3262,17627.0,conda-forge/napari-tomotwin/0.2.0/noarch/napari-tomotwin-0.2.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-tomotwin/0.2.0/noarch/napari-tomotwin-0.2.0-pyhd8ed1ab_0.conda,conda,0.2.0,conda-forge,['main'],conda,noarch/napari-tomotwin-0.2.1-pyhd8ed1ab_0.conda,0.0,MPL-2.0,False,python,"['magicgui', 'matplotlib-base', 'napari', 'napari-clusters-plotter >=0.7.2', 'numpy', 'pandas', 'python >=3.10', 'scipy']",noarch,1694107982313.0,None-any-None,pyhd8ed1ab_0,2023-09-07 17:34:39.664000+00:00,50e0c21fa330684cbc08189b544e0d15,95928593824842d6d80abeb436009c5a5de1a6bbf8d358ba4b459876aca69ce9,17673.0,conda-forge/napari-tomotwin/0.2.1/noarch/napari-tomotwin-0.2.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-tomotwin/0.2.1/noarch/napari-tomotwin-0.2.1-pyhd8ed1ab_0.conda,conda,0.2.1,conda-forge,['main'],conda,noarch/napari-tomotwin-0.2.2-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['magicgui', 'matplotlib-base', 'napari', 'napari-clusters-plotter >=0.7.2', 'numpy', 'pandas', 'python >=3.10', 'scipy']",MPL-2.0,python,1694109313455.0,2023-09-07 17:56:53.091000+00:00,ac2ff3ca4d581a161a6f1a7e84a339b0,73b37955d5c8481467e661b3013f4d3111e90cd6292605ccec24710d8bd858c9,18302.0,conda-forge/napari-tomotwin/0.2.2/noarch/napari-tomotwin-0.2.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-tomotwin/0.2.2/noarch/napari-tomotwin-0.2.2-pyhd8ed1ab_0.conda,conda,0.2.2,conda-forge,['main'],,,,,,,0.2.5,conda-forge/napari-tomotwin/0.2.5,,,conda,noarch/napari-tomotwin-0.2.5-pyhd8ed1ab_0.conda,0.0,MPL-2.0,False,python,"['magicgui', 'matplotlib-base', 'napari', 'napari-clusters-plotter >=0.7.2', 'numpy', 'pandas', 'python >=3.10', 'qtpy', 'scipy']",noarch,1702077626589.0,None-any-None,pyhd8ed1ab_0,2023-12-08 23:22:39.480000+00:00,267367be42712dae947f65e55b5ef24d,7b8985a921f98b5206a18861d9e3fd93f7f6251c8297846a84109c88221122f2,18821.0,conda-forge/napari-tomotwin/0.2.5/noarch/napari-tomotwin-0.2.5-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-tomotwin/0.2.5/noarch/napari-tomotwin-0.2.5-pyhd8ed1ab_0.conda,conda,0.2.5,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +386,napari-toothfairy-annotator,0.0.16,ToothFairy Annotator,The plugin employed to annotate volumes employed in the ToothFairy 2 Challenge,Luca Lumetti,MIT,https://github.com/LucaLumetti/napari-toothfairy-annotator,6616bc3c1d70891bc4d291e6,['conda'],,https://github.com/LucaLumetti/napari-toothfairy-annotator,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-toothfairy-annotator,http://api.anaconda.org/packages/conda-forge/napari-toothfairy-annotator,http://anaconda.org/conda-forge/napari-toothfairy-annotator,"['0.0.5', '0.0.9', '0.0.11', '0.0.12', '0.0.15', '0.0.16']",0.0.16,0.0.16,['noarch'],37.0,,['pyh9208f05_0'],0.0.5,conda-forge/napari-toothfairy-annotator/0.0.5,1.0,0.0,2024-04-10 16:07:21.916000+00:00,2024-04-24 09:56:48.747000+00:00,conda,noarch/napari-toothfairy-annotator-0.0.5-pyh9208f05_0.conda,0.0,MIT,False,python,"['magicgui', 'napari >=0.4.18', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image']",noarch,1712765074406.0,None-any-None,pyh9208f05_0,2024-04-10 16:17:45.449000+00:00,7e8c4e842d4a78eb737b1efba5d21cff,02dd72b6074da83fbec2515461c75a30f2b528616b5eef9ac5b84b6c97dc5760,17511.0,conda-forge/napari-toothfairy-annotator/0.0.5/noarch/napari-toothfairy-annotator-0.0.5-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-toothfairy-annotator/0.0.5/noarch/napari-toothfairy-annotator-0.0.5-pyh9208f05_0.conda,conda,0.0.5,conda-forge,['main'],hidden,,0.2.1,napari-toothfairy-annotator.get_reader,Open data with ToothFairy Annotator,napari_toothfairy_annotator._reader:napari_get_reader,napari-toothfairy-annotator.get_reader,['*'],True,2.1,napari-toothfairy-annotator,0.0.16,,The plugin employed to annotate volumes employed in the ToothFairy 2 Challenge,"# napari-toothfairy-annotator [![License MIT](https://img.shields.io/pypi/l/napari-toothfairy-annotator.svg?color=green)](https://github.com/LucaLumetti/napari-toothfairy-annotator/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-toothfairy-annotator.svg?color=green)](https://pypi.org/project/napari-toothfairy-annotator) @@ -38346,8 +40194,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/LucaLumetti/napari-toothfairy-annotator,Luca Lumetti,lumetti.luca@gmail.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/LucaLumetti/napari-toothfairy-annotator/issues', 'Documentation, https://github.com/LucaLumetti/napari-toothfairy-annotator#README.md', 'Source Code, https://github.com/LucaLumetti/napari-toothfairy-annotator', 'User Support, https://github.com/LucaLumetti/napari-toothfairy-annotator/issues']",['testing'],False,0.0.9,conda-forge/napari-toothfairy-annotator/0.0.9,0.0.11,conda-forge/napari-toothfairy-annotator/0.0.11,0.0.12,conda-forge/napari-toothfairy-annotator/0.0.12,conda,noarch/napari-toothfairy-annotator-0.0.9-pyh9208f05_0.conda,0.0,MIT,False,python,"['magicgui', 'napari >=0.4.18', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image']",pyh9208f05_0,1712838074949.0,None-any-None,noarch,2024-04-11 12:23:22.005000+00:00,caac7d0121a7007bd18ac0f8c9347cba,8d817966b04968a30a3aaa0fe2e13bd00f3c6918a791f236fdc41630b3ec76ca,17695.0,conda-forge/napari-toothfairy-annotator/0.0.9/noarch/napari-toothfairy-annotator-0.0.9-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-toothfairy-annotator/0.0.9/noarch/napari-toothfairy-annotator-0.0.9-pyh9208f05_0.conda,conda,0.0.9,conda-forge,['main'],conda,noarch/napari-toothfairy-annotator-0.0.11-pyh9208f05_0.conda,0.0,MIT,False,python,"['magicgui', 'napari >=0.4.18', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image']",noarch,1713800424803.0,None-any-None,pyh9208f05_0,2024-04-22 15:42:35.347000+00:00,434c6c5d408a4a146a0d122d24524a37,69b1d9a7459d30e1a75e4b79e616b05a60022aabf591fe100f6169d93bfe416e,18458.0,conda-forge/napari-toothfairy-annotator/0.0.11/noarch/napari-toothfairy-annotator-0.0.11-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-toothfairy-annotator/0.0.11/noarch/napari-toothfairy-annotator-0.0.11-pyh9208f05_0.conda,conda,0.0.11,conda-forge,['main'],conda,noarch/napari-toothfairy-annotator-0.0.12-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['magicgui', 'napari >=0.4.18', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image']",MIT,python,1713878789624.0,2024-04-23 13:28:53.286000+00:00,672ba77e32559c0ffa73a296f21beb52,5d8017d7e856c808ed82abbb7d66fd5777d141ad9af11d69a3046574cc438983,18463.0,conda-forge/napari-toothfairy-annotator/0.0.12/noarch/napari-toothfairy-annotator-0.0.12-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-toothfairy-annotator/0.0.12/noarch/napari-toothfairy-annotator-0.0.12-pyh9208f05_0.conda,conda,0.0.12,conda-forge,['main'],"['Annotation', 'Segmentation', 'Acquisition']",napari-toothfairy-annotator.write_multiple,Save multi-layer data with ToothFairy Annotator,napari_toothfairy_annotator._writer:write_multiple,napari-toothfairy-annotator.write_single_image,Save image data with ToothFairy Annotator,napari_toothfairy_annotator._writer:write_single_image,napari-toothfairy-annotator.annotator,Annotator,napari_toothfairy_annotator._widget:FolderBrowser,napari-toothfairy-annotator.annotator,Annotator,False,,,,,,,,,,,,,napari-toothfairy-annotator.write_multiple,"['image*', 'labels*']",,napari-toothfairy-annotator.write_single_image,['image'],['.npy'],,,,,0.0.15,conda-forge/napari-toothfairy-annotator/0.0.15,0.0.16,conda-forge/napari-toothfairy-annotator/0.0.16,,,conda,noarch/napari-toothfairy-annotator-0.0.15-pyh9208f05_0.conda,0.0,MIT,False,python,"['magicgui', 'napari >=0.4.18', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image']",noarch,1713885535241.0,None-any-None,pyh9208f05_0,2024-04-23 15:21:12.544000+00:00,4eadc17e66b8ca929711b26bb4949eab,704710b1a39143d50d6eadb27e563b57a33eb281f04679743149ab4088dd007d,18454.0,conda-forge/napari-toothfairy-annotator/0.0.15/noarch/napari-toothfairy-annotator-0.0.15-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-toothfairy-annotator/0.0.15/noarch/napari-toothfairy-annotator-0.0.15-pyh9208f05_0.conda,conda,0.0.15,conda-forge,['main'],conda,noarch/napari-toothfairy-annotator-0.0.16-pyh9208f05_0.conda,0.0,MIT,False,python,"['magicgui', 'napari >=0.4.18', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image']",noarch,1713952499552.0,None-any-None,pyh9208f05_0,2024-04-24 09:56:46.236000+00:00,550e1d5e7278629f336dfa5ec5ae8d46,a902cd756339b25ce06165b2d24e9e3e35286cbd234a3a98cc9a7a8c7f4c8bca,18624.0,conda-forge/napari-toothfairy-annotator/0.0.16/noarch/napari-toothfairy-annotator-0.0.16-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-toothfairy-annotator/0.0.16/noarch/napari-toothfairy-annotator-0.0.16-pyh9208f05_0.conda,conda,0.0.16,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -369,napari-toska,0.0.1,Napari Topological Skeleton Analysis,Extraacts and analyses topological skeletons as undirected graphs,"Allyson Quinn Ryan, Johannes Soltwedel",BSD-3-Clause,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-toska.labeled_skeleton,Make labeled skeleton image,napari_toska._labeled_skeletonization:generate_labeled_skeletonization,,,,2.1,napari-toska,0.0.1,,Extraacts and analyses topological skeletons as undirected graphs,"# napari-toska +",text/markdown,https://github.com/LucaLumetti/napari-toothfairy-annotator,Luca Lumetti,lumetti.luca@gmail.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/LucaLumetti/napari-toothfairy-annotator/issues', 'Documentation, https://github.com/LucaLumetti/napari-toothfairy-annotator#README.md', 'Source Code, https://github.com/LucaLumetti/napari-toothfairy-annotator', 'User Support, https://github.com/LucaLumetti/napari-toothfairy-annotator/issues']",['testing'],False,0.0.9,conda-forge/napari-toothfairy-annotator/0.0.9,0.0.11,conda-forge/napari-toothfairy-annotator/0.0.11,0.0.12,conda-forge/napari-toothfairy-annotator/0.0.12,conda,noarch/napari-toothfairy-annotator-0.0.9-pyh9208f05_0.conda,0.0,MIT,False,python,"['magicgui', 'napari >=0.4.18', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image']",pyh9208f05_0,1712838074949.0,None-any-None,noarch,2024-04-11 12:23:22.005000+00:00,caac7d0121a7007bd18ac0f8c9347cba,8d817966b04968a30a3aaa0fe2e13bd00f3c6918a791f236fdc41630b3ec76ca,17695.0,conda-forge/napari-toothfairy-annotator/0.0.9/noarch/napari-toothfairy-annotator-0.0.9-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-toothfairy-annotator/0.0.9/noarch/napari-toothfairy-annotator-0.0.9-pyh9208f05_0.conda,conda,0.0.9,conda-forge,['main'],conda,noarch/napari-toothfairy-annotator-0.0.11-pyh9208f05_0.conda,0.0,MIT,False,python,"['magicgui', 'napari >=0.4.18', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image']",noarch,1713800424803.0,None-any-None,pyh9208f05_0,2024-04-22 15:42:35.347000+00:00,434c6c5d408a4a146a0d122d24524a37,69b1d9a7459d30e1a75e4b79e616b05a60022aabf591fe100f6169d93bfe416e,18458.0,conda-forge/napari-toothfairy-annotator/0.0.11/noarch/napari-toothfairy-annotator-0.0.11-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-toothfairy-annotator/0.0.11/noarch/napari-toothfairy-annotator-0.0.11-pyh9208f05_0.conda,conda,0.0.11,conda-forge,['main'],conda,noarch/napari-toothfairy-annotator-0.0.12-pyh9208f05_0.conda,None-any-None,False,noarch,pyh9208f05_0,0.0,"['magicgui', 'napari >=0.4.18', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image']",MIT,python,1713878789624.0,2024-04-23 13:28:53.286000+00:00,672ba77e32559c0ffa73a296f21beb52,5d8017d7e856c808ed82abbb7d66fd5777d141ad9af11d69a3046574cc438983,18463.0,conda-forge/napari-toothfairy-annotator/0.0.12/noarch/napari-toothfairy-annotator-0.0.12-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-toothfairy-annotator/0.0.12/noarch/napari-toothfairy-annotator-0.0.12-pyh9208f05_0.conda,conda,0.0.12,conda-forge,['main'],"['Annotation', 'Segmentation', 'Acquisition']",napari-toothfairy-annotator.write_multiple,Save multi-layer data with ToothFairy Annotator,napari_toothfairy_annotator._writer:write_multiple,napari-toothfairy-annotator.write_single_image,Save image data with ToothFairy Annotator,napari_toothfairy_annotator._writer:write_single_image,napari-toothfairy-annotator.annotator,Annotator,napari_toothfairy_annotator._widget:FolderBrowser,napari-toothfairy-annotator.annotator,Annotator,False,,,,,,,,,,,,,napari-toothfairy-annotator.write_multiple,"['image*', 'labels*']",,napari-toothfairy-annotator.write_single_image,['image'],['.npy'],,,,,0.0.15,conda-forge/napari-toothfairy-annotator/0.0.15,0.0.16,conda-forge/napari-toothfairy-annotator/0.0.16,,,conda,noarch/napari-toothfairy-annotator-0.0.15-pyh9208f05_0.conda,0.0,MIT,False,python,"['magicgui', 'napari >=0.4.18', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image']",noarch,1713885535241.0,None-any-None,pyh9208f05_0,2024-04-23 15:21:12.544000+00:00,4eadc17e66b8ca929711b26bb4949eab,704710b1a39143d50d6eadb27e563b57a33eb281f04679743149ab4088dd007d,18454.0,conda-forge/napari-toothfairy-annotator/0.0.15/noarch/napari-toothfairy-annotator-0.0.15-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-toothfairy-annotator/0.0.15/noarch/napari-toothfairy-annotator-0.0.15-pyh9208f05_0.conda,conda,0.0.15,conda-forge,['main'],conda,noarch/napari-toothfairy-annotator-0.0.16-pyh9208f05_0.conda,0.0,MIT,False,python,"['magicgui', 'napari >=0.4.18', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image']",noarch,1713952499552.0,None-any-None,pyh9208f05_0,2024-04-24 09:56:46.236000+00:00,550e1d5e7278629f336dfa5ec5ae8d46,a902cd756339b25ce06165b2d24e9e3e35286cbd234a3a98cc9a7a8c7f4c8bca,18624.0,conda-forge/napari-toothfairy-annotator/0.0.16/noarch/napari-toothfairy-annotator-0.0.16-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-toothfairy-annotator/0.0.16/noarch/napari-toothfairy-annotator-0.0.16-pyh9208f05_0.conda,conda,0.0.16,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +387,napari-toska,0.0.1,Napari Topological Skeleton Analysis,Extraacts and analyses topological skeletons as undirected graphs,"Allyson Quinn Ryan, Johannes Soltwedel",BSD-3-Clause,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-toska.labeled_skeleton,Make labeled skeleton image,napari_toska._labeled_skeletonization:generate_labeled_skeletonization,,,,2.1,napari-toska,0.0.1,,Extraacts and analyses topological skeletons as undirected graphs,"# napari-toska [![License BSD-3](https://img.shields.io/pypi/l/napari-toska.svg?color=green)](https://github.com/allysonryan/napari-toska/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-toska.svg?color=green)](https://pypi.org/project/napari-toska) @@ -38408,8 +40256,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,,"Allyson Quinn Ryan, Johannes Soltwedel",allyson_quinn.ryan@tu-dresden.de,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image >=0.21.0', 'networkx', 'scipy', 'napari-workflows', 'napari-skimage-regionprops', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/allysonryan/napari-toska/issues', 'Source Code, https://github.com/allysonryan/napari-toska', 'User Support, https://github.com/allysonryan/napari-toska/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-toska.label_branches,Label branches,napari_toska._labeled_skeletonization:label_branches,napari-toska.parse_single_skeleton,Parse single skeletons,napari_toska._labeled_skeletonization:parse_single_skeleton,napari-toska.parse_all_skeletons,Parse all skeletons,napari_toska._labeled_skeletonization:parse_all_skeletons,napari-toska.labeled_skeleton,Make labeled skeleton image,True,napari-toska.label_branches,Label branches of single skeleton,True,napari-toska.parse_single_skeleton,Parse single skeletons,True,napari-toska.parse_all_skeletons,Parse all skeletons,True,napari-toska.analyze_whole_skeletons,Analyze whole skeletons,napari_toska._measurements:analyze_skeletons,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-toska.measure_branch_lengths,Measure branch lengths,napari_toska._measurements:calculate_branch_lengths,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-toska.analyze_whole_skeletons,Analyze whole skeletons,True,napari-toska.measure_branch_lengths,Measure branch lengths,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -370,napari-tracing,1.0.2,Napari Tracer Plugin,A plugin to trace the brightest path between two points in an image,Vasudha Jha,GPL-3.0-only,https://github.com/mapmanager/napari-tracing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-tracing.make_qwidget,Make tracer widget,napari_tracing._widget:TracerWidget,,,,2.1,napari-tracing,1.0.2,,A plugin to trace the brightest path between two points in an image,"# napari-tracing +",text/markdown,,"Allyson Quinn Ryan, Johannes Soltwedel",allyson_quinn.ryan@tu-dresden.de,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image >=0.21.0', 'networkx', 'scipy', 'napari-workflows', 'napari-skimage-regionprops', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/allysonryan/napari-toska/issues', 'Source Code, https://github.com/allysonryan/napari-toska', 'User Support, https://github.com/allysonryan/napari-toska/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-toska.label_branches,Label branches,napari_toska._labeled_skeletonization:label_branches,napari-toska.parse_single_skeleton,Parse single skeletons,napari_toska._labeled_skeletonization:parse_single_skeleton,napari-toska.parse_all_skeletons,Parse all skeletons,napari_toska._labeled_skeletonization:parse_all_skeletons,napari-toska.labeled_skeleton,Make labeled skeleton image,True,napari-toska.label_branches,Label branches of single skeleton,True,napari-toska.parse_single_skeleton,Parse single skeletons,True,napari-toska.parse_all_skeletons,Parse all skeletons,True,napari-toska.analyze_whole_skeletons,Analyze whole skeletons,napari_toska._measurements:analyze_skeletons,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-toska.measure_branch_lengths,Measure branch lengths,napari_toska._measurements:calculate_branch_lengths,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-toska.analyze_whole_skeletons,Analyze whole skeletons,True,napari-toska.measure_branch_lengths,Measure branch lengths,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +388,napari-tracing,1.0.2,Napari Tracer Plugin,A plugin to trace the brightest path between two points in an image,Vasudha Jha,GPL-3.0-only,https://github.com/mapmanager/napari-tracing,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-tracing.make_qwidget,Make tracer widget,napari_tracing._widget:TracerWidget,,,,2.1,napari-tracing,1.0.2,,A plugin to trace the brightest path between two points in an image,"# napari-tracing [![License GNU GPL v3.0](https://img.shields.io/pypi/l/napari-tracing.svg?color=green)](https://github.com/mapmanager/napari-tracing/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-tracing.svg?color=green)](https://pypi.org/project/napari-tracing) @@ -38483,8 +40331,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt [file an issue]: https://github.com/mapmanager/napari-tracing/issues -",text/markdown,https://github.com/mapmanager/napari-tracing,Vasudha Jha,reachvasudha27@gmail.com,GPL-3.0-only,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'qtpy', 'brightest-path-lib', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/mapmanager/napari-tracing/issues', 'Documentation, https://github.com/mapmanager/napari-tracing#README.md', 'Source Code, https://github.com/mapmanager/napari-tracing', 'User Support, https://github.com/mapmanager/napari-tracing/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-tracing.make_qwidget,Tracer Widget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -371,napari-trackastra,0.1.4,trackastra,Napari plugin for cell tracking with trackastra.,"Benjamin Gallusser, Martin Weigert"," +",text/markdown,https://github.com/mapmanager/napari-tracing,Vasudha Jha,reachvasudha27@gmail.com,GPL-3.0-only,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'qtpy', 'brightest-path-lib', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/mapmanager/napari-tracing/issues', 'Documentation, https://github.com/mapmanager/napari-tracing#README.md', 'Source Code, https://github.com/mapmanager/napari-tracing', 'User Support, https://github.com/mapmanager/napari-tracing/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-tracing.make_qwidget,Tracer Widget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +389,napari-trackastra,0.1.6,trackastra,Napari plugin for cell tracking with trackastra.,"Benjamin Gallusser, Martin Weigert"," Copyright (c) 2024, Martin Weigert All rights reserved. @@ -38512,7 +40360,7 @@ SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. -",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,resources/icon.png,0.2.1,napari-trackastra.example_data_bacteria,Sample bacteria images and masks,napari_trackastra._sample_data:example_data_bacteria,,,,2.1,napari-trackastra,0.1.4,,Napari plugin for cell tracking with trackastra.,"# napari-trackastra +",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,resources/icon.png,0.2.1,napari-trackastra.example_data_bacteria,Sample bacteria images and masks,napari_trackastra._sample_data:example_data_bacteria,,,,2.1,napari-trackastra,0.1.6,,Napari plugin for cell tracking with trackastra.,"# napari-trackastra [![PyPI](https://img.shields.io/pypi/v/napari-trackastra.svg?color=green)](https://pypi.org/project/napari-trackastra) [![tests](https://github.com/weigertlab/napari-trackastra/workflows/tests/badge.svg)](https://github.com/weigertlab/napari-trackastra/actions) @@ -38525,14 +40373,15 @@ A napari plugin for cell tracking with [`trackastra`](https://github.com/weigert ## Installation -Install the latest version from PyPI with: -``` -pip install napari-trackastra -``` +1. Please install napari as outlined [here](https://napari.org/stable/tutorials/fundamentals/installation.html). -For tracking with an integer linear program (ILP, which is optional), follow the [installation instructions of the main `trackastra` package](https://github.com/weigertlab/trackastra/blob/main/README.md#installation). +2. After that, install the latest version of this plugin from PyPI with: + ``` + pip install napari-trackastra + ``` Notes: +- For tracking with an integer linear program (ILP, which is optional), follow the [installation instructions of the main `trackastra` package](https://github.com/weigertlab/trackastra/blob/main/README.md#installation). - On Windows currently only supported for Python 3.10. ## Usage @@ -38574,8 +40423,8 @@ SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. -","['Development Status :: 3 - Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['napari[all] <0.5', 'numpy', 'magicgui', 'qtpy', 'scikit-image', 'trackastra', 'napari-ctc-io', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.10,"['Bug Tracker, https://github.com/weigertlab/napari-trackastra/issues', 'Documentation, https://github.com/weigertlab/napari-trackastra#README.md', 'Source Code, https://github.com/weigertlab/napari-trackastra', 'User Support, https://github.com/weigertlab/napari-trackastra/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['Image Processing'],napari-trackastra.example_data_hela,Sample bacteria images and masks,napari_trackastra._sample_data:example_data_hela,napari-trackastra.track,Create Plugin,napari_trackastra:Tracker,,,,napari-trackastra.track,Trackastra tracking,False,,,,,,,,,,,,,,,,,,,,napari-trackastra.example_data_bacteria,unique_id.1,bacteria,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-trackastra.example_data_hela,unique_id.2,hela,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -372,napari-trackpy,0.3.0,Particle tracking,Plugin to do trackpy particle tracking on microscopy data within napari,Roy Hoitink,MIT,https://github.com/rhoitink/napari-trackpy,654bbf65c9623d5c99a305c5,['conda'],,https://pypi.org/project/napari-trackpy,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-trackpy,http://api.anaconda.org/packages/conda-forge/napari-trackpy,http://anaconda.org/conda-forge/napari-trackpy,"['0.2.1', '0.3.0']",0.3.0,0.3.0,['noarch'],5.0,https://github.com/rhoitink/napari-trackpy,['pyh9208f05_0'],0.2.1,conda-forge/napari-trackpy/0.2.1,1.0,0.0,2023-11-08 17:03:30.203000+00:00,2023-11-09 14:13:39.050000+00:00,conda,noarch/napari-trackpy-0.2.1-pyh9208f05_0.conda,0.0,MIT,False,python,"['magicgui', 'matplotlib-base', 'napari', 'napari-aicsimageio >=0.7.0', 'numpy', 'python >=3.8', 'qtpy', 'trackpy']",noarch,1699462810560.0,None-any-None,pyh9208f05_0,2023-11-08 17:03:30.837000+00:00,cca2542c2f74108a0b96e72407b116d8,342c7ea0ab491394422c8104b98cb8e0683c3caf7fcd77ca6be44dd07ce1e7e0,13675.0,conda-forge/napari-trackpy/0.2.1/noarch/napari-trackpy-0.2.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-trackpy/0.2.1/noarch/napari-trackpy-0.2.1-pyh9208f05_0.conda,conda,0.2.1,conda-forge,['main'],public,,0.2.1,napari-trackpy.xyz_tracking,XYZ particle tracking,napari_trackpy._widget:XYZWidget,,,,2.1,napari-trackpy,0.3.0,,Plugin to do trackpy particle tracking on microscopy data within napari,"# napari-trackpy +","['Development Status :: 3 - Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'scikit-image', 'trackastra', 'napari-ctc-io', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.10,"['Bug Tracker, https://github.com/weigertlab/napari-trackastra/issues', 'Documentation, https://github.com/weigertlab/napari-trackastra#README.md', 'Source Code, https://github.com/weigertlab/napari-trackastra', 'User Support, https://github.com/weigertlab/napari-trackastra/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['Image Processing'],napari-trackastra.example_data_hela,Sample bacteria images and masks,napari_trackastra._sample_data:example_data_hela,napari-trackastra.track,Create Plugin,napari_trackastra:Tracker,,,,napari-trackastra.track,Trackastra tracking,False,,,,,,,,,,,,,,,,,,,,napari-trackastra.example_data_bacteria,unique_id.1,bacteria,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-trackastra.example_data_hela,unique_id.2,hela,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +390,napari-trackpy,0.3.0,Particle tracking,Plugin to do trackpy particle tracking on microscopy data within napari,Roy Hoitink,MIT,https://github.com/rhoitink/napari-trackpy,654bbf65c9623d5c99a305c5,['conda'],,https://pypi.org/project/napari-trackpy,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-trackpy,http://api.anaconda.org/packages/conda-forge/napari-trackpy,http://anaconda.org/conda-forge/napari-trackpy,"['0.2.1', '0.3.0']",0.3.0,0.3.0,['noarch'],5.0,https://github.com/rhoitink/napari-trackpy,['pyh9208f05_0'],0.2.1,conda-forge/napari-trackpy/0.2.1,1.0,0.0,2023-11-08 17:03:30.203000+00:00,2023-11-09 14:13:39.050000+00:00,conda,noarch/napari-trackpy-0.2.1-pyh9208f05_0.conda,0.0,MIT,False,python,"['magicgui', 'matplotlib-base', 'napari', 'napari-aicsimageio >=0.7.0', 'numpy', 'python >=3.8', 'qtpy', 'trackpy']",noarch,1699462810560.0,None-any-None,pyh9208f05_0,2023-11-08 17:03:30.837000+00:00,cca2542c2f74108a0b96e72407b116d8,342c7ea0ab491394422c8104b98cb8e0683c3caf7fcd77ca6be44dd07ce1e7e0,13675.0,conda-forge/napari-trackpy/0.2.1/noarch/napari-trackpy-0.2.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-trackpy/0.2.1/noarch/napari-trackpy-0.2.1-pyh9208f05_0.conda,conda,0.2.1,conda-forge,['main'],public,,0.2.1,napari-trackpy.xyz_tracking,XYZ particle tracking,napari_trackpy._widget:XYZWidget,,,,2.1,napari-trackpy,0.3.0,,Plugin to do trackpy particle tracking on microscopy data within napari,"# napari-trackpy [![License MIT](https://img.shields.io/pypi/l/napari-trackpy.svg?color=green)](https://github.com/rhoitink/napari-trackpy/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-trackpy.svg?color=green)](https://pypi.org/project/napari-trackpy) @@ -38625,8 +40474,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/rhoitink/napari-trackpy,Roy Hoitink,L.D.Hoitink@uu.nl,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'napari', 'napari-aicsimageio', 'readlif', 'trackpy', 'matplotlib', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/rhoitink/napari-trackpy/issues', 'Documentation, https://github.com/rhoitink/napari-trackpy#README.md', 'Source Code, https://github.com/rhoitink/napari-trackpy', 'User Support, https://github.com/rhoitink/napari-trackpy/issues']",['testing'],False,0.3.0,conda-forge/napari-trackpy/0.3.0,,,,,conda,noarch/napari-trackpy-0.3.0-pyh9208f05_0.conda,0.0,MIT,False,python,"['magicgui', 'matplotlib-base', 'napari', 'napari-aicsimageio >=0.7.0', 'numpy', 'python >=3.8', 'qtpy', 'superqt', 'trackpy']",pyh9208f05_0,1699539063773.0,None-any-None,noarch,2023-11-09 14:13:37.486000+00:00,7b3488133782f0a82dafaff8cec5034c,65e863ca904232cb267d067bc8f95eed48f3c42336f89cca7b88e4c0e6ba8fa7,13861.0,conda-forge/napari-trackpy/0.3.0/noarch/napari-trackpy-0.3.0-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-trackpy/0.3.0/noarch/napari-trackpy-0.3.0-pyh9208f05_0.conda,conda,0.3.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-trackpy.write_points_xyzfile,Save points layer to xyz file,napari_trackpy._writer:xyz_file_writer,,,,,,,napari-trackpy.xyz_tracking,XYZ particle tracking,False,,,,,,,,,,,,,napari-trackpy.write_points_xyzfile,['points'],XYZ format,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['.xyz'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -373,napari-tracks-reader,0.1.3,napari-tracks-reader,"Read tracks from txt (xml, csv) files to napari",Sylvain Prigent,GNU GPL v3.0,https://github.com/sylvainprigent/napari-tracks-reader,620634a903b93eb2b190d6b8,['conda'],,https://github.com/sylvainprigent/napari-tracks-reader,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-tracks-reader,http://api.anaconda.org/packages/conda-forge/napari-tracks-reader,http://anaconda.org/conda-forge/napari-tracks-reader,['0.1.3'],0.1.3,0.1.3,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.3,conda-forge/napari-tracks-reader/0.1.3,1.0,0.0,2022-02-11 10:04:22.025000+00:00,2023-06-18 08:40:49.765000+00:00,conda,noarch/napari-tracks-reader-0.1.3-pyhd8ed1ab_0.tar.bz2,0.0,GPL-3.0-only,False,python,"['napari-plugin-engine >=0.1.4', 'numpy', 'pandas >=1.2.4', 'python >=3.6']",noarch,1644573820394.0,None-any-None,pyhd8ed1ab_0,2022-02-11 10:04:23.014000+00:00,0e08e77979f942e1717eae4c397ff03a,None,28316.0,conda-forge/napari-tracks-reader/0.1.3/noarch/napari-tracks-reader-0.1.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-tracks-reader/0.1.3/noarch/napari-tracks-reader-0.1.3-pyhd8ed1ab_0.tar.bz2,conda,0.1.3,conda-forge,['main'],public,,0.2.1,napari-tracks-reader.napari_get_reader,napari_get_reader,napari_tracks_reader._reader:napari_get_reader,napari-tracks-reader.napari_get_reader,['*'],True,2.1,napari-tracks-reader,0.1.3,['UNKNOWN'],"Read tracks from txt (xml, csv) files to napari","# napari-tracks-reader +",text/markdown,https://github.com/rhoitink/napari-trackpy,Roy Hoitink,L.D.Hoitink@uu.nl,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'napari', 'napari-aicsimageio', 'readlif', 'trackpy', 'matplotlib', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/rhoitink/napari-trackpy/issues', 'Documentation, https://github.com/rhoitink/napari-trackpy#README.md', 'Source Code, https://github.com/rhoitink/napari-trackpy', 'User Support, https://github.com/rhoitink/napari-trackpy/issues']",['testing'],False,0.3.0,conda-forge/napari-trackpy/0.3.0,,,,,conda,noarch/napari-trackpy-0.3.0-pyh9208f05_0.conda,0.0,MIT,False,python,"['magicgui', 'matplotlib-base', 'napari', 'napari-aicsimageio >=0.7.0', 'numpy', 'python >=3.8', 'qtpy', 'superqt', 'trackpy']",pyh9208f05_0,1699539063773.0,None-any-None,noarch,2023-11-09 14:13:37.486000+00:00,7b3488133782f0a82dafaff8cec5034c,65e863ca904232cb267d067bc8f95eed48f3c42336f89cca7b88e4c0e6ba8fa7,13861.0,conda-forge/napari-trackpy/0.3.0/noarch/napari-trackpy-0.3.0-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-trackpy/0.3.0/noarch/napari-trackpy-0.3.0-pyh9208f05_0.conda,conda,0.3.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-trackpy.write_points_xyzfile,Save points layer to xyz file,napari_trackpy._writer:xyz_file_writer,,,,,,,napari-trackpy.xyz_tracking,XYZ particle tracking,False,,,,,,,,,,,,,napari-trackpy.write_points_xyzfile,['points'],XYZ format,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['.xyz'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +391,napari-tracks-reader,0.1.3,napari-tracks-reader,"Read tracks from txt (xml, csv) files to napari",Sylvain Prigent,GNU GPL v3.0,https://github.com/sylvainprigent/napari-tracks-reader,620634a903b93eb2b190d6b8,['conda'],,https://github.com/sylvainprigent/napari-tracks-reader,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-tracks-reader,http://api.anaconda.org/packages/conda-forge/napari-tracks-reader,http://anaconda.org/conda-forge/napari-tracks-reader,['0.1.3'],0.1.3,0.1.3,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.3,conda-forge/napari-tracks-reader/0.1.3,1.0,0.0,2022-02-11 10:04:22.025000+00:00,2023-06-18 08:40:49.765000+00:00,conda,noarch/napari-tracks-reader-0.1.3-pyhd8ed1ab_0.tar.bz2,0.0,GPL-3.0-only,False,python,"['napari-plugin-engine >=0.1.4', 'numpy', 'pandas >=1.2.4', 'python >=3.6']",noarch,1644573820394.0,None-any-None,pyhd8ed1ab_0,2022-02-11 10:04:23.014000+00:00,0e08e77979f942e1717eae4c397ff03a,None,28316.0,conda-forge/napari-tracks-reader/0.1.3/noarch/napari-tracks-reader-0.1.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-tracks-reader/0.1.3/noarch/napari-tracks-reader-0.1.3-pyhd8ed1ab_0.tar.bz2,conda,0.1.3,conda-forge,['main'],public,,0.2.1,napari-tracks-reader.napari_get_reader,napari_get_reader,napari_tracks_reader._reader:napari_get_reader,napari-tracks-reader.napari_get_reader,['*'],True,2.1,napari-tracks-reader,0.1.3,['UNKNOWN'],"Read tracks from txt (xml, csv) files to napari","# napari-tracks-reader [![License](https://img.shields.io/pypi/l/napari-tracks-reader.svg?color=green)](https://github.com/sylvainprigent/napari-tracks-reader/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-tracks-reader.svg?color=green)](https://pypi.org/project/napari-tracks-reader) @@ -38689,8 +40538,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/sylvainprigent/napari-tracks-reader,Sylvain Prigent,sylvain.prigent@inria.fr,GNU GPL v3.0,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'pandas (>=1.2.4)']",>=3.6,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -374,napari-trait2d,0.1.4,napari TRAIT2D,"A napari plugin for TRAIT2D, a software for quantitative analysis of single particle diffusion data",Jacopo Abramo,BSD-3-Clause,https://github.com/jacopoabramo/napari-trait2d,62fdfc54709bbe0ab4fdb44e,['conda'],,https://github.com/jacopoabramo/napari-trait2d,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-trait2d,http://api.anaconda.org/packages/conda-forge/napari-trait2d,http://anaconda.org/conda-forge/napari-trait2d,"['0.1.2', '0.1.4']",0.1.4,0.1.4,['noarch'],4.0,,['pyhd8ed1ab_0'],0.1.2,conda-forge/napari-trait2d/0.1.2,1.0,0.0,2022-08-18 08:46:09.256000+00:00,2023-06-18 08:42:20.291000+00:00,conda,noarch/napari-trait2d-0.1.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dacite', 'napari', 'numpy', 'python >=3.8', 'qtpy']",noarch,1660812230041.0,None-any-None,pyhd8ed1ab_0,2022-08-18 08:46:09.866000+00:00,6d704f258db6da8389ca4b0b9e76cdd1,dd9c5ce00fbaeac03237382d19d883360eb7f58ec9e10f9a026fbd022ab49b75,14869.0,conda-forge/napari-trait2d/0.1.2/noarch/napari-trait2d-0.1.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-trait2d/0.1.2/noarch/napari-trait2d-0.1.2-pyhd8ed1ab_0.tar.bz2,conda,0.1.2,conda-forge,['main'],public,,0.2.1,napari-trait2d.trait2d_widget,napari TRAIT2D,napari_trait2d._widget:NTRAIT2D,,,,2.1,napari-trait2d,0.1.4,,"A napari plugin for TRAIT2D, a software for quantitative analysis of single particle diffusion data","# napari-trait2d +",text/markdown,https://github.com/sylvainprigent/napari-tracks-reader,Sylvain Prigent,sylvain.prigent@inria.fr,GNU GPL v3.0,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'pandas (>=1.2.4)']",>=3.6,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +392,napari-trait2d,0.1.4,napari TRAIT2D,"A napari plugin for TRAIT2D, a software for quantitative analysis of single particle diffusion data",Jacopo Abramo,BSD-3-Clause,https://github.com/jacopoabramo/napari-trait2d,62fdfc54709bbe0ab4fdb44e,['conda'],,https://github.com/jacopoabramo/napari-trait2d,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-trait2d,http://api.anaconda.org/packages/conda-forge/napari-trait2d,http://anaconda.org/conda-forge/napari-trait2d,"['0.1.2', '0.1.4']",0.1.4,0.1.4,['noarch'],4.0,,['pyhd8ed1ab_0'],0.1.2,conda-forge/napari-trait2d/0.1.2,1.0,0.0,2022-08-18 08:46:09.256000+00:00,2023-06-18 08:42:20.291000+00:00,conda,noarch/napari-trait2d-0.1.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dacite', 'napari', 'numpy', 'python >=3.8', 'qtpy']",noarch,1660812230041.0,None-any-None,pyhd8ed1ab_0,2022-08-18 08:46:09.866000+00:00,6d704f258db6da8389ca4b0b9e76cdd1,dd9c5ce00fbaeac03237382d19d883360eb7f58ec9e10f9a026fbd022ab49b75,14869.0,conda-forge/napari-trait2d/0.1.2/noarch/napari-trait2d-0.1.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-trait2d/0.1.2/noarch/napari-trait2d-0.1.2-pyhd8ed1ab_0.tar.bz2,conda,0.1.2,conda-forge,['main'],public,,0.2.1,napari-trait2d.trait2d_widget,napari TRAIT2D,napari_trait2d._widget:NTRAIT2D,,,,2.1,napari-trait2d,0.1.4,,"A napari plugin for TRAIT2D, a software for quantitative analysis of single particle diffusion data","# napari-trait2d [![License BSD-3](https://img.shields.io/pypi/l/napari-trait2d.svg?color=green)](https://github.com/jacopoabramo/napari-trait2d/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-trait2d.svg?color=green)](https://pypi.org/project/napari-trait2d) @@ -38757,8 +40606,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/jacopoabramo/napari-trait2d,Jacopo Abramo,jacopo.abramo@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10']","['numpy', 'qtpy', 'napari[pyqt5]', 'dacite', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/jacopoabramo/napari-trait2d/issues', 'Documentation, https://github.com/jacopoabramo/napari-trait2d#README.md', 'Source Code, https://github.com/jacopoabramo/napari-trait2d', 'User Support, https://github.com/jacopoabramo/napari-trait2d/issues']",['testing'],False,0.1.4,conda-forge/napari-trait2d/0.1.4,,,,,conda,noarch/napari-trait2d-0.1.4-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dacite', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image', 'superqt']",pyhd8ed1ab_0,1660869336579.0,None-any-None,noarch,2022-08-19 00:37:46.729000+00:00,2106fc630dbe1cf677f48d53805975e8,None,15845.0,conda-forge/napari-trait2d/0.1.4/noarch/napari-trait2d-0.1.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-trait2d/0.1.4/noarch/napari-trait2d-0.1.4-pyhd8ed1ab_0.tar.bz2,conda,0.1.4,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-trait2d.trait2d_widget,TRAIT2D tracker GUI,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -375,napari-turing,0.3.2,Turing Patterns,A plugin to run simmple simulations of Turing patterns,Léo Guignard,MIT,https://github.com/leoguignard/napari-turing,62ff5069c954963b8695e329,['conda'],,https://github.com/leoguignard/napari-turing,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-turing,http://api.anaconda.org/packages/conda-forge/napari-turing,http://anaconda.org/conda-forge/napari-turing,"['0.1.0', '0.3.2']",0.3.2,0.3.2,['noarch'],4.0,,['pyhd8ed1ab_0'],0.1.0,conda-forge/napari-turing/0.1.0,1.0,0.0,2022-08-19 08:57:09.548000+00:00,2023-06-18 08:42:21.038000+00:00,conda,noarch/napari-turing-0.1.0-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image', 'scipy']",noarch,1660899266502.0,None-any-None,pyhd8ed1ab_0,2022-08-19 08:57:10.829000+00:00,46948296ff4d8b34ad47d4d048b759ec,None,12543.0,conda-forge/napari-turing/0.1.0/noarch/napari-turing-0.1.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-turing/0.1.0/noarch/napari-turing-0.1.0-pyhd8ed1ab_0.tar.bz2,conda,0.1.0,conda-forge,['main'],public,,0.2.1,napari-turing.TuringViewer,Turing Patterns,napari_turing._widget:TuringViewer,,,,2.1,napari-turing,0.3.2,,A plugin to run simmple simulations of Turing patterns,"# napari-turing +",text/markdown,https://github.com/jacopoabramo/napari-trait2d,Jacopo Abramo,jacopo.abramo@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10']","['numpy', 'qtpy', 'napari[pyqt5]', 'dacite', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/jacopoabramo/napari-trait2d/issues', 'Documentation, https://github.com/jacopoabramo/napari-trait2d#README.md', 'Source Code, https://github.com/jacopoabramo/napari-trait2d', 'User Support, https://github.com/jacopoabramo/napari-trait2d/issues']",['testing'],False,0.1.4,conda-forge/napari-trait2d/0.1.4,,,,,conda,noarch/napari-trait2d-0.1.4-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dacite', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image', 'superqt']",pyhd8ed1ab_0,1660869336579.0,None-any-None,noarch,2022-08-19 00:37:46.729000+00:00,2106fc630dbe1cf677f48d53805975e8,None,15845.0,conda-forge/napari-trait2d/0.1.4/noarch/napari-trait2d-0.1.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-trait2d/0.1.4/noarch/napari-trait2d-0.1.4-pyhd8ed1ab_0.tar.bz2,conda,0.1.4,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-trait2d.trait2d_widget,TRAIT2D tracker GUI,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +393,napari-turing,0.3.2,Turing Patterns,A plugin to run simmple simulations of Turing patterns,Léo Guignard,MIT,https://github.com/leoguignard/napari-turing,62ff5069c954963b8695e329,['conda'],,https://github.com/leoguignard/napari-turing,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-turing,http://api.anaconda.org/packages/conda-forge/napari-turing,http://anaconda.org/conda-forge/napari-turing,"['0.1.0', '0.3.2']",0.3.2,0.3.2,['noarch'],4.0,,['pyhd8ed1ab_0'],0.1.0,conda-forge/napari-turing/0.1.0,1.0,0.0,2022-08-19 08:57:09.548000+00:00,2023-06-18 08:42:21.038000+00:00,conda,noarch/napari-turing-0.1.0-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image', 'scipy']",noarch,1660899266502.0,None-any-None,pyhd8ed1ab_0,2022-08-19 08:57:10.829000+00:00,46948296ff4d8b34ad47d4d048b759ec,None,12543.0,conda-forge/napari-turing/0.1.0/noarch/napari-turing-0.1.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-turing/0.1.0/noarch/napari-turing-0.1.0-pyhd8ed1ab_0.tar.bz2,conda,0.1.0,conda-forge,['main'],public,,0.2.1,napari-turing.TuringViewer,Turing Patterns,napari_turing._widget:TuringViewer,,,,2.1,napari-turing,0.3.2,,A plugin to run simmple simulations of Turing patterns,"# napari-turing [![License MIT](https://img.shields.io/pypi/l/napari-turing.svg?color=green)](https://github.com/leoguignard/napari-turing/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-turing.svg?color=green)](https://pypi.org/project/napari-turing) @@ -38984,8 +40833,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/leoguignard/napari-turing,Léo Guignard,leo.guignard@univ-amu.fr,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'scipy', 'scikit-image', 'magicgui', 'qtpy', 'napari', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/leoguignard/napari-turing/issues', 'Documentation, https://github.com/leoguignard/napari-turing#README.md', 'Source Code, https://github.com/leoguignard/napari-turing', 'User Support, https://github.com/leoguignard/napari-turing/issues']",['testing'],False,0.3.2,conda-forge/napari-turing/0.3.2,,,,,conda,noarch/napari-turing-0.3.2-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image', 'scipy']",pyhd8ed1ab_0,1667941951791.0,None-any-None,noarch,2022-11-08 21:15:06.344000+00:00,a5d00f7d48312ad312f0a9b3e79db389,None,19940.0,conda-forge/napari-turing/0.3.2/noarch/napari-turing-0.3.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-turing/0.3.2/noarch/napari-turing-0.3.2-pyhd8ed1ab_0.tar.bz2,conda,0.3.2,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-turing.TuringViewer,Turing Patterns,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -376,napari-tyssue,0.1.2,napari tyssue,A napari plugin for use with the tyssue library,Kyle Harrington,BSD-3-Clause,https://github.com/kephale/napari-tyssue,643ebd64263f8dd3463e1426,['conda'],,https://github.com/kephale/napari-tyssue,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-tyssue,http://api.anaconda.org/packages/conda-forge/napari-tyssue,http://anaconda.org/conda-forge/napari-tyssue,['0.1.2'],0.1.2,0.1.2,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.2,conda-forge/napari-tyssue/0.1.2,1.0,0.0,2023-04-18 15:55:11.765000+00:00,2023-06-18 17:28:02.754000+00:00,conda,noarch/napari-tyssue-0.1.2-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['imageio-ffmpeg', 'invagination >=0.0.2', 'magicgui', 'napari', 'numpy', 'pooch', 'pytables', 'python >=3.8,<3.10', 'qtpy', 'quantities', 'tyssue']",noarch,1681833128223.0,None-any-None,pyhd8ed1ab_0,2023-04-18 15:55:12.248000+00:00,05583a16a804be9f7a51bf6e3f08af47,d4794b17954410fa14b34d0d515c98f58303425d946ba1ef50e7b77a832050b8,20251.0,conda-forge/napari-tyssue/0.1.2/noarch/napari-tyssue-0.1.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-tyssue/0.1.2/noarch/napari-tyssue-0.1.2-pyhd8ed1ab_0.conda,conda,0.1.2,conda-forge,['main'],public,,0.2.1,napari-tyssue.make_apoptosis_widget,napari-tyssue apoptosis demo simulation,napari_tyssue.apoptosis:ApoptosisWidget,,,,2.1,napari-tyssue,0.1.2,,A napari plugin for use with the tyssue library,"# napari-tyssue +",text/markdown,https://github.com/leoguignard/napari-turing,Léo Guignard,leo.guignard@univ-amu.fr,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'scipy', 'scikit-image', 'magicgui', 'qtpy', 'napari', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/leoguignard/napari-turing/issues', 'Documentation, https://github.com/leoguignard/napari-turing#README.md', 'Source Code, https://github.com/leoguignard/napari-turing', 'User Support, https://github.com/leoguignard/napari-turing/issues']",['testing'],False,0.3.2,conda-forge/napari-turing/0.3.2,,,,,conda,noarch/napari-turing-0.3.2-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image', 'scipy']",pyhd8ed1ab_0,1667941951791.0,None-any-None,noarch,2022-11-08 21:15:06.344000+00:00,a5d00f7d48312ad312f0a9b3e79db389,None,19940.0,conda-forge/napari-turing/0.3.2/noarch/napari-turing-0.3.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-turing/0.3.2/noarch/napari-turing-0.3.2-pyhd8ed1ab_0.tar.bz2,conda,0.3.2,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-turing.TuringViewer,Turing Patterns,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +394,napari-tyssue,0.1.2,napari tyssue,A napari plugin for use with the tyssue library,Kyle Harrington,BSD-3-Clause,https://github.com/kephale/napari-tyssue,643ebd64263f8dd3463e1426,['conda'],,https://github.com/kephale/napari-tyssue,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-tyssue,http://api.anaconda.org/packages/conda-forge/napari-tyssue,http://anaconda.org/conda-forge/napari-tyssue,['0.1.2'],0.1.2,0.1.2,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.2,conda-forge/napari-tyssue/0.1.2,1.0,0.0,2023-04-18 15:55:11.765000+00:00,2023-06-18 17:28:02.754000+00:00,conda,noarch/napari-tyssue-0.1.2-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['imageio-ffmpeg', 'invagination >=0.0.2', 'magicgui', 'napari', 'numpy', 'pooch', 'pytables', 'python >=3.8,<3.10', 'qtpy', 'quantities', 'tyssue']",noarch,1681833128223.0,None-any-None,pyhd8ed1ab_0,2023-04-18 15:55:12.248000+00:00,05583a16a804be9f7a51bf6e3f08af47,d4794b17954410fa14b34d0d515c98f58303425d946ba1ef50e7b77a832050b8,20251.0,conda-forge/napari-tyssue/0.1.2/noarch/napari-tyssue-0.1.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-tyssue/0.1.2/noarch/napari-tyssue-0.1.2-pyhd8ed1ab_0.conda,conda,0.1.2,conda-forge,['main'],public,,0.2.1,napari-tyssue.make_apoptosis_widget,napari-tyssue apoptosis demo simulation,napari_tyssue.apoptosis:ApoptosisWidget,,,,2.1,napari-tyssue,0.1.2,,A napari plugin for use with the tyssue library,"# napari-tyssue [![License BSD-3](https://img.shields.io/pypi/l/napari-tyssue.svg?color=green)](https://github.com/kephale/napari-tyssue/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-tyssue.svg?color=green)](https://pypi.org/project/napari-tyssue) @@ -39069,8 +40918,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/kephale/napari-tyssue,Kyle Harrington,czi@kyleharrington.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'tyssue', 'quantities', 'pooch', 'tables', 'imageio-ffmpeg', 'invagination (==0.0.2)', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/kephale/napari-tyssue/issues', 'Documentation, https://github.com/kephale/napari-tyssue#README.md', 'Source Code, https://github.com/kephale/napari-tyssue', 'User Support, https://github.com/kephale/napari-tyssue/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-tyssue.make_invagination_widget,napari-tyssue invagination demo simulation,napari_tyssue.invagination:InvaginationWidget,,,,,,,napari-tyssue.make_apoptosis_widget,napari-tyssue apoptosis,False,napari-tyssue.make_invagination_widget,napari-tyssue invagination,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -377,napari-ufish,0.0.1,U-FISH,Deep learning-based FISH spot calling method.,Weize Xu,MIT,,655bb381f6e23618f6bb8295,['conda'],,https://pypi.org/project/napari-ufish,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-ufish,http://api.anaconda.org/packages/conda-forge/napari-ufish,http://anaconda.org/conda-forge/napari-ufish,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,,['pyh9208f05_0'],0.0.1,conda-forge/napari-ufish/0.0.1,1.0,0.0,2023-11-20 19:29:03.196000+00:00,2023-11-20 19:29:05.948000+00:00,conda,noarch/napari-ufish-0.0.1-pyh9208f05_0.conda,0.0,MIT,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.9', 'qtpy', 'scikit-image', 'ufish']",noarch,1700508323485.0,None-any-None,pyh9208f05_0,2023-11-20 19:29:03.623000+00:00,3920dc5ca58778ba5cac08b6b743512b,e5a2db96e70c228df6c9757f6fe2b2e5a47b594f3a310fa7035034ee2a79c596,432273.0,conda-forge/napari-ufish/0.0.1/noarch/napari-ufish-0.0.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-ufish/0.0.1/noarch/napari-ufish-0.0.1-pyh9208f05_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-ufish.make_sample_data,Load sample data from U-FISH,napari_ufish._sample_data:make_sample_data,,,,2.1,napari-ufish,0.0.1,,Deep learning-based FISH spot calling method.,"# napari-ufish +",text/markdown,https://github.com/kephale/napari-tyssue,Kyle Harrington,czi@kyleharrington.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'tyssue', 'quantities', 'pooch', 'tables', 'imageio-ffmpeg', 'invagination (==0.0.2)', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/kephale/napari-tyssue/issues', 'Documentation, https://github.com/kephale/napari-tyssue#README.md', 'Source Code, https://github.com/kephale/napari-tyssue', 'User Support, https://github.com/kephale/napari-tyssue/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-tyssue.make_invagination_widget,napari-tyssue invagination demo simulation,napari_tyssue.invagination:InvaginationWidget,,,,,,,napari-tyssue.make_apoptosis_widget,napari-tyssue apoptosis,False,napari-tyssue.make_invagination_widget,napari-tyssue invagination,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +395,napari-ufish,0.0.1,U-FISH,Deep learning-based FISH spot calling method.,Weize Xu,MIT,,655bb381f6e23618f6bb8295,['conda'],,https://pypi.org/project/napari-ufish,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-ufish,http://api.anaconda.org/packages/conda-forge/napari-ufish,http://anaconda.org/conda-forge/napari-ufish,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,,['pyh9208f05_0'],0.0.1,conda-forge/napari-ufish/0.0.1,1.0,0.0,2023-11-20 19:29:03.196000+00:00,2023-11-20 19:29:05.948000+00:00,conda,noarch/napari-ufish-0.0.1-pyh9208f05_0.conda,0.0,MIT,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.9', 'qtpy', 'scikit-image', 'ufish']",noarch,1700508323485.0,None-any-None,pyh9208f05_0,2023-11-20 19:29:03.623000+00:00,3920dc5ca58778ba5cac08b6b743512b,e5a2db96e70c228df6c9757f6fe2b2e5a47b594f3a310fa7035034ee2a79c596,432273.0,conda-forge/napari-ufish/0.0.1/noarch/napari-ufish-0.0.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-ufish/0.0.1/noarch/napari-ufish-0.0.1-pyh9208f05_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-ufish.make_sample_data,Load sample data from U-FISH,napari_ufish._sample_data:make_sample_data,,,,2.1,napari-ufish,0.0.1,,Deep learning-based FISH spot calling method.,"# napari-ufish [![License MIT](https://img.shields.io/pypi/l/napari-ufish.svg?color=green)](https://github.com/UFISH-Team/napari-ufish/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-ufish.svg?color=green)](https://pypi.org/project/napari-ufish) @@ -39144,8 +40993,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,,Weize Xu,vet.xwz@gmail.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', 'ufish', 'napari', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.9,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-ufish.make_inference_widget,Inference,napari_ufish._widget:InferenceWidget,napari-ufish.make_train_widget,Train,napari_ufish._widget:TrainWidget,,,,napari-ufish.make_inference_widget,U-FISH Inference,False,napari-ufish.make_train_widget,U-FISH Train,False,,,,,,,,,,,,,,,,,napari-ufish.make_sample_data,unique_id.1,U-FISH,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -378,napari-ui-tracer,0.1.2,Napari UI tracer,A plugin to help understand Napari UI components and check their source code definition,Daniel Althviz,MIT,https://github.com/dalthviz/napari-ui-tracer,641c93f660fdb0f2a5e6b9bd,['conda'],A plugin to help understand Napari UI components and locate their code definition,https://github.com/dalthviz/napari-ui-tracer,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-ui-tracer,http://api.anaconda.org/packages/conda-forge/napari-ui-tracer,http://anaconda.org/conda-forge/napari-ui-tracer,"['0.1.1', '0.1.2']",0.1.2,0.1.2,['noarch'],4.0,,['pyhd8ed1ab_0'],0.1.1,conda-forge/napari-ui-tracer/0.1.1,1.0,0.0,2023-03-23 18:01:22.858000+00:00,2023-06-18 17:27:50.125000+00:00,conda,noarch/napari-ui-tracer-0.1.1-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['python >=3.8', 'qtpy >=2.3.0']",noarch,1679594333241.0,None-any-None,pyhd8ed1ab_0,2023-03-23 18:01:23.437000+00:00,97aa007a6a47dd9e77c87793a450a567,5cd6a4e82f11a14838826108b379cebae7b7a7e9e95b1f8fda297b98ab3eb9b4,14240.0,conda-forge/napari-ui-tracer/0.1.1/noarch/napari-ui-tracer-0.1.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-ui-tracer/0.1.1/noarch/napari-ui-tracer-0.1.1-pyhd8ed1ab_0.conda,conda,0.1.1,conda-forge,['main'],public,,0.2.1,napari-ui-tracer.make_qwidget,Make Napari UI tracer widget,napari_ui_tracer._widget:QtNapariUITracer,,,,2.1,napari-ui-tracer,0.1.2,,A plugin to help understand Napari UI components and check their source code definition,"# napari-ui-tracer +",text/markdown,,Weize Xu,vet.xwz@gmail.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', 'ufish', 'napari', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.9,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-ufish.make_inference_widget,Inference,napari_ufish._widget:InferenceWidget,napari-ufish.make_train_widget,Train,napari_ufish._widget:TrainWidget,,,,napari-ufish.make_inference_widget,U-FISH Inference,False,napari-ufish.make_train_widget,U-FISH Train,False,,,,,,,,,,,,,,,,,napari-ufish.make_sample_data,unique_id.1,U-FISH,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +396,napari-ui-tracer,0.1.2,Napari UI tracer,A plugin to help understand Napari UI components and check their source code definition,Daniel Althviz,MIT,https://github.com/dalthviz/napari-ui-tracer,641c93f660fdb0f2a5e6b9bd,['conda'],A plugin to help understand Napari UI components and locate their code definition,https://github.com/dalthviz/napari-ui-tracer,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-ui-tracer,http://api.anaconda.org/packages/conda-forge/napari-ui-tracer,http://anaconda.org/conda-forge/napari-ui-tracer,"['0.1.1', '0.1.2']",0.1.2,0.1.2,['noarch'],4.0,,['pyhd8ed1ab_0'],0.1.1,conda-forge/napari-ui-tracer/0.1.1,1.0,0.0,2023-03-23 18:01:22.858000+00:00,2023-06-18 17:27:50.125000+00:00,conda,noarch/napari-ui-tracer-0.1.1-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['python >=3.8', 'qtpy >=2.3.0']",noarch,1679594333241.0,None-any-None,pyhd8ed1ab_0,2023-03-23 18:01:23.437000+00:00,97aa007a6a47dd9e77c87793a450a567,5cd6a4e82f11a14838826108b379cebae7b7a7e9e95b1f8fda297b98ab3eb9b4,14240.0,conda-forge/napari-ui-tracer/0.1.1/noarch/napari-ui-tracer-0.1.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-ui-tracer/0.1.1/noarch/napari-ui-tracer-0.1.1-pyhd8ed1ab_0.conda,conda,0.1.1,conda-forge,['main'],public,,0.2.1,napari-ui-tracer.make_qwidget,Make Napari UI tracer widget,napari_ui_tracer._widget:QtNapariUITracer,,,,2.1,napari-ui-tracer,0.1.2,,A plugin to help understand Napari UI components and check their source code definition,"# napari-ui-tracer [![License MIT](https://img.shields.io/pypi/l/napari-ui-tracer.svg?color=green)](https://github.com/dalthviz/napari-ui-tracer/raw/main/LICENSE) [![Python Version](https://img.shields.io/pypi/pyversions/napari-ui-tracer.svg?color=green)](https://python.org) @@ -39233,8 +41082,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ [conda]: https://docs.conda.io/projects/conda/en/stable/ -",text/markdown,https://github.com/dalthviz/napari-ui-tracer,Daniel Althviz,dalthviz@gmail.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['qtpy (>=2.3.0)', ""pre-commit ; extra == 'pre-commit'"", ""pyqt5 ; extra == 'pyqt5'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/dalthviz/napari-ui-tracer/issues', 'Documentation, https://github.com/dalthviz/napari-ui-tracer#README.md', 'Source Code, https://github.com/dalthviz/napari-ui-tracer', 'User Support, https://github.com/dalthviz/napari-ui-tracer/issues']","['pre-commit', 'pyqt5', 'testing']",False,0.1.2,conda-forge/napari-ui-tracer/0.1.2,,,,,conda,noarch/napari-ui-tracer-0.1.2-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['python >=3.8', 'qtpy >=2.3.0']",pyhd8ed1ab_0,1681488666328.0,None-any-None,noarch,2023-04-14 16:13:22.253000+00:00,58f950c30ad1f744b11e26ee9370f8eb,98c42c56569553183462cc92ff2797755aeecd317464234562632bdcaa33e886,14479.0,conda-forge/napari-ui-tracer/0.1.2/noarch/napari-ui-tracer-0.1.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-ui-tracer/0.1.2/noarch/napari-ui-tracer-0.1.2-pyhd8ed1ab_0.conda,conda,0.1.2,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-ui-tracer.make_qwidget,Napari UI tracer widget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -379,napari-umap,0.0.1,UMAP,A simple plugin to use with napari,Jordao Bragantini,BSD-3-Clause,https://github.com/royerlab/napari-umap,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-umap.make_qwidget,Make example QWidget,napari_umap._widget:ExampleQWidget,,,,2.1,napari-umap,0.0.1,,A simple plugin to use with napari,"# napari-umap +",text/markdown,https://github.com/dalthviz/napari-ui-tracer,Daniel Althviz,dalthviz@gmail.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['qtpy (>=2.3.0)', ""pre-commit ; extra == 'pre-commit'"", ""pyqt5 ; extra == 'pyqt5'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/dalthviz/napari-ui-tracer/issues', 'Documentation, https://github.com/dalthviz/napari-ui-tracer#README.md', 'Source Code, https://github.com/dalthviz/napari-ui-tracer', 'User Support, https://github.com/dalthviz/napari-ui-tracer/issues']","['pre-commit', 'pyqt5', 'testing']",False,0.1.2,conda-forge/napari-ui-tracer/0.1.2,,,,,conda,noarch/napari-ui-tracer-0.1.2-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['python >=3.8', 'qtpy >=2.3.0']",pyhd8ed1ab_0,1681488666328.0,None-any-None,noarch,2023-04-14 16:13:22.253000+00:00,58f950c30ad1f744b11e26ee9370f8eb,98c42c56569553183462cc92ff2797755aeecd317464234562632bdcaa33e886,14479.0,conda-forge/napari-ui-tracer/0.1.2/noarch/napari-ui-tracer-0.1.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-ui-tracer/0.1.2/noarch/napari-ui-tracer-0.1.2-pyhd8ed1ab_0.conda,conda,0.1.2,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-ui-tracer.make_qwidget,Napari UI tracer widget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +397,napari-umap,0.0.1,UMAP,A simple plugin to use with napari,Jordao Bragantini,BSD-3-Clause,https://github.com/royerlab/napari-umap,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-umap.make_qwidget,Make example QWidget,napari_umap._widget:ExampleQWidget,,,,2.1,napari-umap,0.0.1,,A simple plugin to use with napari,"# napari-umap [![License BSD-3](https://img.shields.io/pypi/l/napari-umap.svg?color=green)](https://github.com/royerlab/napari-umap/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-umap.svg?color=green)](https://pypi.org/project/napari-umap) @@ -39301,8 +41150,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/royerlab/napari-umap,Jordao Bragantini,jordao.bragantini@czbiohub.org,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/royerlab/napari-umap/issues', 'Documentation, https://github.com/royerlab/napari-umap#README.md', 'Source Code, https://github.com/royerlab/napari-umap', 'User Support, https://github.com/royerlab/napari-umap/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-umap.make_magic_widget,Make example magic widget,napari_umap._widget:example_magic_widget,napari-umap.make_func_widget,Make example function widget,napari_umap._widget:example_function_widget,,,,napari-umap.make_qwidget,Example QWidget,False,napari-umap.make_magic_widget,Example Magic Widget,False,napari-umap.make_func_widget,Example Function Widget,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -380,napari-unicell,0.0.1.post3,unicell,universal cell segmentation models,Jun Ma,Apache-2.0,https://github.com/JunMa11/napari-unicell,64470fbf2e917f0f9b50ab51,['conda'],,https://github.com/JunMa11/napari-unicell,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-unicell,http://api.anaconda.org/packages/conda-forge/napari-unicell,http://anaconda.org/conda-forge/napari-unicell,['0.0.1.post3'],0.0.1.post3,0.0.1.post3,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.1.post3,conda-forge/napari-unicell/0.0.1.post3,1.0,0.0,2023-04-24 23:24:44.381000+00:00,2023-06-18 17:28:05.546000+00:00,conda,noarch/napari-unicell-0.0.1.post3-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['einops', 'imagecodecs', 'magicgui', 'monai', 'napari', 'napari-plugin-engine', 'numpy', 'pyqt', 'python >=3.8', 'pytorch', 'qtpy', 'scikit-image', 'scipy']",noarch,1682378529975.0,None-any-None,pyhd8ed1ab_0,2023-04-24 23:24:44.883000+00:00,85dcc71ca650db482744ebcabd5f2ae3,7448dab17abd88848455f9c9d632d21d696c45f627f9a9f7a98f1e15e80df278,28798.0,conda-forge/napari-unicell/0.0.1.post3/noarch/napari-unicell-0.0.1.post3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-unicell/0.0.1.post3/noarch/napari-unicell-0.0.1.post3-pyhd8ed1ab_0.conda,conda,0.0.1.post3,conda-forge,['main'],public,,0.2.1,napari-unicell.unicell_widget,Run UniCell,napari_unicell._widget:unicell_widget,,,,2.1,napari-unicell,0.0.1.post3,,universal cell segmentation models,"# napari-unicell +",text/markdown,https://github.com/royerlab/napari-umap,Jordao Bragantini,jordao.bragantini@czbiohub.org,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/royerlab/napari-umap/issues', 'Documentation, https://github.com/royerlab/napari-umap#README.md', 'Source Code, https://github.com/royerlab/napari-umap', 'User Support, https://github.com/royerlab/napari-umap/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-umap.make_magic_widget,Make example magic widget,napari_umap._widget:example_magic_widget,napari-umap.make_func_widget,Make example function widget,napari_umap._widget:example_function_widget,,,,napari-umap.make_qwidget,Example QWidget,False,napari-umap.make_magic_widget,Example Magic Widget,False,napari-umap.make_func_widget,Example Function Widget,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +398,napari-unicell,0.0.1.post3,unicell,universal cell segmentation models,Jun Ma,Apache-2.0,https://github.com/JunMa11/napari-unicell,64470fbf2e917f0f9b50ab51,['conda'],,https://github.com/JunMa11/napari-unicell,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-unicell,http://api.anaconda.org/packages/conda-forge/napari-unicell,http://anaconda.org/conda-forge/napari-unicell,['0.0.1.post3'],0.0.1.post3,0.0.1.post3,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.1.post3,conda-forge/napari-unicell/0.0.1.post3,1.0,0.0,2023-04-24 23:24:44.381000+00:00,2023-06-18 17:28:05.546000+00:00,conda,noarch/napari-unicell-0.0.1.post3-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['einops', 'imagecodecs', 'magicgui', 'monai', 'napari', 'napari-plugin-engine', 'numpy', 'pyqt', 'python >=3.8', 'pytorch', 'qtpy', 'scikit-image', 'scipy']",noarch,1682378529975.0,None-any-None,pyhd8ed1ab_0,2023-04-24 23:24:44.883000+00:00,85dcc71ca650db482744ebcabd5f2ae3,7448dab17abd88848455f9c9d632d21d696c45f627f9a9f7a98f1e15e80df278,28798.0,conda-forge/napari-unicell/0.0.1.post3/noarch/napari-unicell-0.0.1.post3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-unicell/0.0.1.post3/noarch/napari-unicell-0.0.1.post3-pyhd8ed1ab_0.conda,conda,0.0.1.post3,conda-forge,['main'],public,,0.2.1,napari-unicell.unicell_widget,Run UniCell,napari_unicell._widget:unicell_widget,,,,2.1,napari-unicell,0.0.1.post3,,universal cell segmentation models,"# napari-unicell [![License Apache Software License 2.0](https://img.shields.io/pypi/l/napari-unicell.svg?color=green)](https://github.com/JunMa11/napari-unicell/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-unicell.svg?color=green)](https://pypi.org/project/napari-unicell) @@ -39365,8 +41214,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/JunMa11/napari-unicell,Jun Ma,junma.ma@mail.utoronto.ca,Apache-2.0,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['torch', 'imagecodecs', 'scipy', 'numpy', 'magicgui', 'qtpy', 'scikit-image', 'monai', 'einops', 'PyQt5', 'napari', 'napari-plugin-engine', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/JunMa11/napari-unicell/issues', 'Documentation, https://github.com/JunMa11/napari-unicell#README.md', 'Source Code, https://github.com/JunMa11/napari-unicell', 'User Support, https://github.com/JunMa11/napari-unicell/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-unicell.unicell_widget,Run UniCell,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -381,napari-utrack-loader,0.0.1,Utrack Loader,"A simple plugin to load images, detections and tracks from the u-track software into napari",Jules Vanaret," +",text/markdown,https://github.com/JunMa11/napari-unicell,Jun Ma,junma.ma@mail.utoronto.ca,Apache-2.0,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['torch', 'imagecodecs', 'scipy', 'numpy', 'magicgui', 'qtpy', 'scikit-image', 'monai', 'einops', 'PyQt5', 'napari', 'napari-plugin-engine', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/JunMa11/napari-unicell/issues', 'Documentation, https://github.com/JunMa11/napari-unicell#README.md', 'Source Code, https://github.com/JunMa11/napari-unicell', 'User Support, https://github.com/JunMa11/napari-unicell/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-unicell.unicell_widget,Run UniCell,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +399,napari-utrack-loader,0.0.1,Utrack Loader,"A simple plugin to load images, detections and tracks from the u-track software into napari",Jules Vanaret," The MIT License (MIT) Copyright (c) 2024 Jules Vanaret @@ -39477,8 +41326,8 @@ AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE. -","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'tifffile', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.9,"['Bug Tracker, https://github.com/jules-vanaret/napari-utrack-loader/issues', 'Documentation, https://github.com/jules-vanaret/napari-utrack-loader#README.md', 'Source Code, https://github.com/jules-vanaret/napari-utrack-loader', 'User Support, https://github.com/jules-vanaret/napari-utrack-loader/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",,,,,,,,,,napari-utrack-loader.UtrackLoader,Utrack Loader,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -382,napari-validate-random-label-predictions,0.0.1,napari validate random label predictions,Validate separate instances of label predictions manually,Niklas Netter,BSD-3-Clause,https://github.com/gatoniel/napari-validate-random-label-predictions,643dad5ca989d73a1003de53,['conda'],,https://github.com/gatoniel/napari-validate-random-label-predictions,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-validate-random-label-predictions,http://api.anaconda.org/packages/conda-forge/napari-validate-random-label-predictions,http://anaconda.org/conda-forge/napari-validate-random-label-predictions,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-validate-random-label-predictions/0.0.1,1.0,0.0,2023-04-17 20:34:33.079000+00:00,2023-06-18 17:28:02.328000+00:00,conda,noarch/napari-validate-random-label-predictions-0.0.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8,<3.11', 'qtpy', 'scikit-image']",noarch,1681763521622.0,None-any-None,pyhd8ed1ab_0,2023-04-17 20:34:33.701000+00:00,bc7084e7b1603b9bddaf03efc4f8ebc6,7d3cdeedc7607853fecbcb106dba5976154f1eb3b4eb970c6bbbcbb4334245d9,12677.0,conda-forge/napari-validate-random-label-predictions/0.0.1/noarch/napari-validate-random-label-predictions-0.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-validate-random-label-predictions/0.0.1/noarch/napari-validate-random-label-predictions-0.0.1-pyhd8ed1ab_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-validate-random-label-predictions.make_qwidget,Validate labels,napari_validate_random_label_predictions._widget:ValidateLabelsWidget,,,,2.1,napari-validate-random-label-predictions,0.0.1,,Validate separate instances of label predictions manually,"# napari-validate-random-label-predictions +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'tifffile', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.9,"['Bug Tracker, https://github.com/jules-vanaret/napari-utrack-loader/issues', 'Documentation, https://github.com/jules-vanaret/napari-utrack-loader#README.md', 'Source Code, https://github.com/jules-vanaret/napari-utrack-loader', 'User Support, https://github.com/jules-vanaret/napari-utrack-loader/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",,,,,,,,,,napari-utrack-loader.UtrackLoader,Utrack Loader,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +400,napari-validate-random-label-predictions,0.0.1,napari validate random label predictions,Validate separate instances of label predictions manually,Niklas Netter,BSD-3-Clause,https://github.com/gatoniel/napari-validate-random-label-predictions,643dad5ca989d73a1003de53,['conda'],,https://github.com/gatoniel/napari-validate-random-label-predictions,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-validate-random-label-predictions,http://api.anaconda.org/packages/conda-forge/napari-validate-random-label-predictions,http://anaconda.org/conda-forge/napari-validate-random-label-predictions,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-validate-random-label-predictions/0.0.1,1.0,0.0,2023-04-17 20:34:33.079000+00:00,2023-06-18 17:28:02.328000+00:00,conda,noarch/napari-validate-random-label-predictions-0.0.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8,<3.11', 'qtpy', 'scikit-image']",noarch,1681763521622.0,None-any-None,pyhd8ed1ab_0,2023-04-17 20:34:33.701000+00:00,bc7084e7b1603b9bddaf03efc4f8ebc6,7d3cdeedc7607853fecbcb106dba5976154f1eb3b4eb970c6bbbcbb4334245d9,12677.0,conda-forge/napari-validate-random-label-predictions/0.0.1/noarch/napari-validate-random-label-predictions-0.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-validate-random-label-predictions/0.0.1/noarch/napari-validate-random-label-predictions-0.0.1-pyhd8ed1ab_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-validate-random-label-predictions.make_qwidget,Validate labels,napari_validate_random_label_predictions._widget:ValidateLabelsWidget,,,,2.1,napari-validate-random-label-predictions,0.0.1,,Validate separate instances of label predictions manually,"# napari-validate-random-label-predictions [![License BSD-3](https://img.shields.io/pypi/l/napari-validate-random-label-predictions.svg?color=green)](https://github.com/gatoniel/napari-validate-random-label-predictions/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-validate-random-label-predictions.svg?color=green)](https://pypi.org/project/napari-validate-random-label-predictions) @@ -39545,8 +41394,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/gatoniel/napari-validate-random-label-predictions,Niklas Netter,niknett@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/gatoniel/napari-validate-random-label-predictions/issues', 'Documentation, https://github.com/gatoniel/napari-validate-random-label-predictions#README.md', 'Source Code, https://github.com/gatoniel/napari-validate-random-label-predictions', 'User Support, https://github.com/gatoniel/napari-validate-random-label-predictions/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-validate-random-label-predictions.make_qwidget,Validate Labels,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -383,Napari-VASCilia,1.0.0,VASCilia,VASCilia (Vision Analysis StereoCilia): A Napari Plugin for Deep Learning-Based 3D Analysis of Cochlear Hair Cell Stereocilia Bundles,Yasmin Kassim," +",text/markdown,https://github.com/gatoniel/napari-validate-random-label-predictions,Niklas Netter,niknett@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/gatoniel/napari-validate-random-label-predictions/issues', 'Documentation, https://github.com/gatoniel/napari-validate-random-label-predictions#README.md', 'Source Code, https://github.com/gatoniel/napari-validate-random-label-predictions', 'User Support, https://github.com/gatoniel/napari-validate-random-label-predictions/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-validate-random-label-predictions.make_qwidget,Validate Labels,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +401,Napari-VASCilia,1.3.0,VASCilia,VASCilia (Vision Analysis StereoCilia): A Napari Plugin for Deep Learning-Based 3D Analysis of Cochlear Hair Cell Stereocilia Bundles,Yasmin Kassim," Copyright (c) 2024, Yasmin Kassim All rights reserved. @@ -39574,7 +41423,7 @@ SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. -",https://github.com/ucsdmanorlab/Napari-VASCilia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,Napari-VASCilia.initialize_ui,Initialize UI,napari_vascilia.Napari_VASCilia_v1_0_0:initialize_vascilia_ui,,,,2.1,Napari-VASCilia,1.0.0,,VASCilia (Vision Analysis StereoCilia): A Napari Plugin for Deep Learning-Based 3D Analysis of Cochlear Hair Cell Stereocilia Bundles,"# VASCilia (Vision Analysis StereoCilia): A Napari Plugin for Deep Learning-Based 3D Analysis of Cochlear Hair Cell Stereocilia Bundles +",https://github.com/ucsdmanorlab/Napari-VASCilia,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,Napari-VASCilia.initialize_ui,Initialize UI,napari_vascilia.Napari_VASCilia_v1_3_0:initialize_vascilia_ui,,,,2.1,Napari-VASCilia,1.3.0,,VASCilia (Vision Analysis StereoCilia): A Napari Plugin for Deep Learning-Based 3D Analysis of Cochlear Hair Cell Stereocilia Bundles,"# VASCilia (Vision Analysis StereoCilia): A Napari Plugin for Deep Learning-Based 3D Analysis of Cochlear Hair Cell Stereocilia Bundles

@@ -39599,7 +41448,7 @@ Furthermore, we are committed to supporting research growth with a comprehensive VASCilia is here to support researchers in their quest for deeper understanding and innovation in the study of cochlear structures. *[click the image to see a highlights reel of the plugin](https://youtu.be/MwMOxJQ_elo)* -[![Watch the video](images/VASCilia_pipeline.png)](https://youtu.be/MwMOxJQ_elo) +[![Watch the video](images/VASCilia_pipeline2.png)](https://youtu.be/MwMOxJQ_elo) *[Click me to see a video demo of the entire workflow](https://youtu.be/mNPJ1g0vEW8)* @@ -39610,7 +41459,7 @@ wsl --install -d Ubuntu-20.04 2. After the setup successfully completes, reboot your computer. Open Ubuntu by typing ""Ubuntu"" in the search bar. A pop-up window for Ubuntu will appear. To check if CUDA and the GPU are correctly installed and available, type nvidia-smi in the terminal STEP2[Download the deep learning trained models]: -1. Download the VASCilia_trained_models from https://www.dropbox.com/scl/fo/xh40g5htgw6lnzxfaqf8f/h?rlkey=9di5nl7f1uq2v623cfc9gki7j&dl=0 +1. Download the VASCilia_trained_models from https://www.dropbox.com/scl/fo/jsvldda8yvma3omfijxxn/ALeDfYUbiOuj69Flbc728rs?rlkey=mtilfz33qiizpul7uyisud5st&st=41kjlbw0&dl=0 now you should have a folder called 'models' - 📁 **models** `[Trained models]` @@ -39619,13 +41468,15 @@ now you should have a folder called 'models' - 📁 **region_prediction** `[has weights for region prediction]` - 📁 **seg_model** `[has the weights for the 3D instance segmentation model]` - 📁 **Train_predict_stereocilia_exe** `[executible needed by the plugin to segment and retrain the model using WSL]` + - 📁 **ZFT_trim_model** `[deep learning model weights for z focus tracker algorithm]` + - 📁 **rotation_correction_model** `[deep learning model weights for correcting the orientation of the stack]` STEP3[download one dataset to test VASCilia]: download one sample from our datasets to try in this link https://www.dropbox.com/scl/fo/pg3i39xaf3vtjydh663n9/h?rlkey=agtnxau73vrv3ism0h55eauek&dl=0 create a folder, called raw_data folder and put the downloaded dataset inside the raw_data folder - 📁 **raw_data** `[raw data (stacks) is placed here]` - - 📄 Litter 12 Mouse 1 MIDDLE - delBUNdelCAP_Airyscan Processing.czi + - 📄 Litter 12 Mouse 4 MIDDLE - delBUNdelCAP_Airyscan Processing.czi Also create another folder called processed_data in which the plugin will use to store the results of the analysis @@ -39645,9 +41496,10 @@ napari ## Option B: Installing via PyPI: ```sh conda create -y -n napari-VASCilia -c conda-forge python=3.10 -conda activate napari-VASCilia +conda activate napari-VASCilia +# Download the requirements.txt file from this repository and ensure you have it in your working directory. pip install -r requirements.txt -pip install napari-vascilia +pip install Napari-VASCilia napari ``` Post-installation: @@ -39663,22 +41515,28 @@ Please update the /.../ portion according to your paths: ```sh { -""rootfolder"": ""C:/Users/.../processed_data/"", -""wsl_executable"": ""C:/Users/.../models/Train_predict_stereocilia_exe/Train_Predict_stereocilia_exe_v2"", -""model"": ""C:/Users/.../models/seg_model/stereocilia_v7/"", -""model_output_path"": ""C:/Users/.../models/new_seg_model/stereocilia_v8/"", -""model_region_prediction"": ""C:/Users/.../models/region_prediction/resnet50_best_checkpoint_resnet50_balancedclass.pth"", -""model_celltype_identification"": ""C:/Users/.../models/cell_type_identification_model/"", -""flag_to_resize"": false, -""flag_to_pad"": false, -""resize_dimension"": 1200, -""pad_dimension"": 1500, -""button_width"": 60, -""button_height"": 22 + ""rootfolder"": ""C:/Users/.../processed_data/"", + ""wsl_executable"": ""C:/Users/.../models/Train_predict_stereocilia_exe/Train_Predict_stereocilia_exe_v2"", + ""model"": ""C:/Users/.../models/seg_model/stereocilia_v7/"", + ""model_output_path"": ""C:/Users/.../models/new_seg_model/stereocilia_v8/"", + ""model_region_prediction"": ""C:/Users/.../models/region_prediction/resnet50_best_checkpoint_resnet50_balancedclass.pth"", + ""model_celltype_identification"": ""C:/Users/.../models/cell_type_identification_model/"", + ""ZFT_trim_model"": ""C:/Users/.../models/ZFT_trim_model/"", + ""rotation_correction_model"": ""C:/Users/.../models/rotation_correction_model/"", + ""green_channel"": 0, + ""red_channel"": 1, + ""blue_channel"": -1, + ""signal_intensity_channel"": 0, + ""flag_to_resize"": false, + ""flag_to_pad"": false, + ""resize_dimension"": 1200, + ""pad_dimension"": 1500, + ""button_width"": 100, + ""button_height"": 35 } ``` -Congratulations :) 🎉, now you are ready to run: Run Napari_VASCilia_v1_0_0.py +Congratulations :) 🎉, now you can enjoy working with the plugin. ## Unique about VASCilia : VASCilia saves all the intermediate results and the variables inside a pickle file while the user is using it in a very effiecint way. That allows a super fast uploading for the analysis if the user or their supervisor wants to keep working or review the analysis steps. @@ -39691,8 +41549,8 @@ There are several buttons inside the blugin in the right hand side of Napari: 1. 'Open CZI Cochlea Files and Preprocess' button: read the CZI file. 2. 'Upload Processed CZI Stack' button: Incase you already have processed the stack, then just uplead your Analysis_state.pkl that usually has all the variables needed to upload your analysis -3. 'Trim Full Stack' button: this button allows you to choose only the slices of interest (will be automated in the near future) -4. ""Rotate' buttom: this button allows to rotate the stack to have proper analysis (will be automated in the near future) +3. 'Trim Full Stack' button: this button allows you to choose only the slices of interest (has been automated in v_1_1_0) +4. ""Rotate' buttom: this button allows to rotate the stack to have proper analysis (has been automated in v_1_1_0) 5. Segment with 3DBundleSeg: it is a two steps algorithm (2D detection + multi-object assignment algorithm across all slices) to produce robust 3D detection. 3DBundleSeg is the first instance segmentation model for stereocilia bundles in the literature. It is trained on P5 and P21 3D stacks (thousands of 2D instances) and it produces highly acccurate boundary delineation even in the most challenging datasets. Here are some examples:

@@ -39748,6 +41606,24 @@ The training section is for the research ear community incase their datasets are VASCilia also equipped with two more buttons for resetting (to facilitate transitions between analyzing several stacks) and also exit VASCilia. We are still working on the documentation, so this gihub will be continiuosly updated. +## Multi-Batch Processing Feature: Required File +The **Multi-Batch Processing** feature in this package requires an additional file: `track_me_SORT_v3_exe.exe`. This file is **not included** in the repository or the pip installation due to size constraints. +### Download the File +You can download the file from the following link: +[Download track_me_SORT_v3_exe.exe]*[[https://www.dropbox.com/your-file-link](https://www.dropbox.com/scl/fo/sud3ziayvo7efcsbzgrd7/ACeJ6uMjNLcyk7ev0upJREE?rlkey=e6nzvpz8aoebzq4w3o5f339le&st=1qtmf3mf&dl=0)] +### If You Clone the Repository +1. Download the file from the link above. +2. Place the file in the following directory within the cloned repository: src/napari_vascilia/core/ +### If You Installed the Package via pip +1. Download the file from the link above. +2. Locate the installation directory for the package. You can find the installation path by running the following Python code: +```python +import napari_vascilia +print(napari_vascilia.__file__) +``` +3. Place the downloaded file in the following directory: /src/napari_vascilia/core/ +Note: All other features of the package will function as expected without this file. This file is exclusively for batch processing of multiple files. + ## Testing Other Lab Data Liberman Data *[Click me to see a video demo of the entire workflow](https://youtu.be/PIG3q7G6Xr0)* Artur Indzhykulian Data *[Click me to see a video demo of the entire workflow](https://youtu.be/WseYK4Zn-3o)* @@ -39817,8 +41693,8 @@ SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. -","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.9,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Segmentation', 'Annotation', 'Measurement', 'Image Processing', 'Visualization']",,,,,,,,,,Napari-VASCilia.initialize_ui,VASCilia UI,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -384,napari-vedo-bridge,0.2.1,napari vedo bridge,Transfer mesh data between napari and vedo for interactive processing,"Johannes Soltwedel, Marco Musy"," +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""']",>=3.9,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Segmentation', 'Annotation', 'Measurement', 'Image Processing', 'Visualization']",,,,,,,,,,Napari-VASCilia.initialize_ui,VASCilia UI,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +402,napari-vedo-bridge,0.2.1,napari vedo bridge,Transfer mesh data between napari and vedo for interactive processing,"Johannes Soltwedel, Marco Musy"," Copyright (c) 2023, Johannes Soltwedel, Marco Musy All rights reserved. @@ -39994,8 +41870,8 @@ SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. -","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'vedo>=2024.5.2', 'napari-timelapse-processor', 'napari', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.9,"['Bug Tracker, https://github.com/jo-mueller/napari-vedo-bridge/issues', 'Documentation, https://github.com/jo-mueller/napari-vedo-bridge#README.md', 'Source Code, https://github.com/jo-mueller/napari-vedo-bridge', 'User Support, https://github.com/jo-mueller/napari-vedo-bridge/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-vedo-bridge.cutter_widget,Interactive mesh cutting with Vedo,napari_vedo_bridge._cutter_widget:VedoCutter,napari-vedo-bridge.write_points,Save points layer to vtp,napari_vedo_bridge._writer:write_points,napari-vedo-bridge.write_surfaces,Save surface layer to vtp,napari_vedo_bridge._writer:write_surfaces,napari-vedo-bridge.cutter_widget,Mesh cutter,True,napari-vedo-bridge.vedo_viewer,Vedo mesh viewer,False,napari-vedo-bridge.compute_normals,Compute normals,False,napari-vedo-bridge.shrink,Shrink mesh,False,napari-vedo-bridge.load_points,Load points from disk,napari_vedo_bridge._reader:get_reader,napari-vedo-bridge.write_points,['points?'],,napari-vedo-bridge.write_surfaces,['surface'],"['.vtp', '.vtk', '.obj', '.stl', '.ply']",,napari-vedo-bridge.data.mouse_limb1,mouse_limb1,Mouse limb 1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-vedo-bridge.data.mouse_limb2,mouse_limb2,Mouse limb 2,napari-vedo-bridge.load_surfaces,Load surfaces from disk,napari_vedo_bridge._reader:get_reader,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-vedo-bridge.compute_normals,Compute normals on surface,napari_vedo_bridge._mesh:compute_normals,napari-vedo-bridge.shrink,Shrink surface,napari_vedo_bridge._mesh:shrink,napari-vedo-bridge.subdivide,Subdivide surface,napari_vedo_bridge._mesh:subdivide,napari-vedo-bridge.decimate,Decimate surface,napari_vedo_bridge._mesh:decimate,napari-vedo-bridge.decimate_pro,Decimate surface (Pro algorithm),napari_vedo_bridge._mesh:decimate_pro,napari-vedo-bridge.decimate_binned,Decimate surface (Binned algorithm),napari_vedo_bridge._mesh:decimate_binned,['.vtp'],napari-vedo-bridge.subdivide,Subdivide mesh,False,napari-vedo-bridge.decimate,Decimate mesh,False,napari-vedo-bridge.decimate_pro,Decimate mesh (Pro algorithm),False,napari-vedo-bridge.decimate_binned,Decimate mesh (Binned algorithm),False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-vedo-bridge.data.mouse_limb3,mouse_limb3,Mouse limb 3 -385,napari-vemseg,0.0.9,napari-vemseg,A simple plugin for semi-automated segmentation of volume electron microscopy images.,Matous Elphick,BSD-3-Clause,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-vemseg.vemseg_pixel_classifier,VEMseg Train Pixel Classifier,napari_vemseg.vem_pixel_classifier:VEMSEGClassifier,,,,2.1,napari-vemseg,0.0.9,,A simple plugin for semi-automated segmentation of volume electron microscopy images.," +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'vedo>=2024.5.2', 'napari-timelapse-processor', 'napari', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.9,"['Bug Tracker, https://github.com/jo-mueller/napari-vedo-bridge/issues', 'Documentation, https://github.com/jo-mueller/napari-vedo-bridge#README.md', 'Source Code, https://github.com/jo-mueller/napari-vedo-bridge', 'User Support, https://github.com/jo-mueller/napari-vedo-bridge/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-vedo-bridge.cutter_widget,Interactive mesh cutting with Vedo,napari_vedo_bridge._cutter_widget:VedoCutter,napari-vedo-bridge.write_points,Save points layer to vtp,napari_vedo_bridge._writer:write_points,napari-vedo-bridge.write_surfaces,Save surface layer to vtp,napari_vedo_bridge._writer:write_surfaces,napari-vedo-bridge.cutter_widget,Mesh cutter,True,napari-vedo-bridge.vedo_viewer,Vedo mesh viewer,False,napari-vedo-bridge.compute_normals,Compute normals,False,napari-vedo-bridge.shrink,Shrink mesh,False,napari-vedo-bridge.load_points,Load points from disk,napari_vedo_bridge._reader:get_reader,napari-vedo-bridge.write_points,['points?'],,napari-vedo-bridge.write_surfaces,['surface'],"['.vtp', '.vtk', '.obj', '.stl', '.ply']",,napari-vedo-bridge.data.mouse_limb1,mouse_limb1,Mouse limb 1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-vedo-bridge.data.mouse_limb2,mouse_limb2,Mouse limb 2,napari-vedo-bridge.load_surfaces,Load surfaces from disk,napari_vedo_bridge._reader:get_reader,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-vedo-bridge.compute_normals,Compute normals on surface,napari_vedo_bridge._mesh:compute_normals,napari-vedo-bridge.shrink,Shrink surface,napari_vedo_bridge._mesh:shrink,napari-vedo-bridge.subdivide,Subdivide surface,napari_vedo_bridge._mesh:subdivide,napari-vedo-bridge.decimate,Decimate surface,napari_vedo_bridge._mesh:decimate,napari-vedo-bridge.decimate_pro,Decimate surface (Pro algorithm),napari_vedo_bridge._mesh:decimate_pro,['.vtp'],napari-vedo-bridge.subdivide,Subdivide mesh,False,napari-vedo-bridge.decimate,Decimate mesh,False,napari-vedo-bridge.decimate_pro,Decimate mesh (Pro algorithm),False,napari-vedo-bridge.decimate_binned,Decimate mesh (Binned algorithm),False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-vedo-bridge.data.mouse_limb3,mouse_limb3,Mouse limb 3 +403,napari-vemseg,0.0.9,napari-vemseg,A simple plugin for semi-automated segmentation of volume electron microscopy images.,Matous Elphick,BSD-3-Clause,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-vemseg.vemseg_pixel_classifier,VEMseg Train Pixel Classifier,napari_vemseg.vem_pixel_classifier:VEMSEGClassifier,,,,2.1,napari-vemseg,0.0.9,,A simple plugin for semi-automated segmentation of volume electron microscopy images.," # napari-vemseg @@ -40065,8 +41941,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,,Matous Elphick,matous.elphick@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Topic :: Scientific/Engineering :: Image Processing']","['torch', 'numpy', 'scikit-image', 'magicgui', 'qtpy', 'napari', 'tqdm', 'apoc', 'superqt', 'setuptools', 'vemseg']",>=3.8,,,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-vemseg.predict_pixel_classifier,VEMseg Predict Pixel Classifier,napari_vemseg.predict_pixel_classifier:VEMSEGClassifierPredict,napari-vemseg.phh_predict,PHH Mitochondria Predict,napari_vemseg.phh_predict:PHHPredictWidget,,,,napari-vemseg.vemseg_pixel_classifier,VEMseg Train Pixel Classifier,False,napari-vemseg.predict_pixel_classifier,VEMseg Predict Pixel Classifier,False,napari-vemseg.phh_predict,PHH Mitochondria Predict,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -386,napari-vesicles-segmentation,0.0.1,Vesicles Segmentation,A simple plugin to detect vesicles in cells images.,Alexis Japas,BSD-3-Clause,https://github.com/alexisjapas/napari-vesicles-segmentation,62fe070ee59174b88abb2c80,['conda'],,https://github.com/alexisjapas/napari-vesicles-segmentation,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-vesicles-segmentation,http://api.anaconda.org/packages/conda-forge/napari-vesicles-segmentation,http://anaconda.org/conda-forge/napari-vesicles-segmentation,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-vesicles-segmentation/0.0.1,1.0,0.0,2022-08-18 09:31:54.800000+00:00,2023-06-18 08:42:20.474000+00:00,conda,noarch/napari-vesicles-segmentation-0.0.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image', 'scipy']",noarch,1660814971104.0,None-any-None,pyhd8ed1ab_0,2022-08-18 09:31:55.956000+00:00,0b7bcf18bbfef927ce9a3fdf202b0db9,aaf8f00370a9072363f7b8d84e1f97cec33bbf1123357ad483e80eb4ccada6ba,12282.0,conda-forge/napari-vesicles-segmentation/0.0.1/noarch/napari-vesicles-segmentation-0.0.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-vesicles-segmentation/0.0.1/noarch/napari-vesicles-segmentation-0.0.1-pyhd8ed1ab_0.tar.bz2,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-vesicles-segmentation.make_qwidget,Make segmentation widget,napari_vesicles_segmentation._widget:Segmentation,,,,2.1,napari-vesicles-segmentation,0.0.1,,A simple plugin to detect vesicles in cells images.,"# napari-vesicles-segmentation +",text/markdown,,Matous Elphick,matous.elphick@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Topic :: Scientific/Engineering :: Image Processing']","['torch', 'numpy', 'scikit-image', 'magicgui', 'qtpy', 'napari', 'tqdm', 'apoc', 'superqt', 'setuptools', 'vemseg']",>=3.8,,,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-vemseg.predict_pixel_classifier,VEMseg Predict Pixel Classifier,napari_vemseg.predict_pixel_classifier:VEMSEGClassifierPredict,napari-vemseg.phh_predict,PHH Mitochondria Predict,napari_vemseg.phh_predict:PHHPredictWidget,,,,napari-vemseg.vemseg_pixel_classifier,VEMseg Train Pixel Classifier,False,napari-vemseg.predict_pixel_classifier,VEMseg Predict Pixel Classifier,False,napari-vemseg.phh_predict,PHH Mitochondria Predict,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +404,napari-vesicles-segmentation,0.0.1,Vesicles Segmentation,A simple plugin to detect vesicles in cells images.,Alexis Japas,BSD-3-Clause,https://github.com/alexisjapas/napari-vesicles-segmentation,62fe070ee59174b88abb2c80,['conda'],,https://github.com/alexisjapas/napari-vesicles-segmentation,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-vesicles-segmentation,http://api.anaconda.org/packages/conda-forge/napari-vesicles-segmentation,http://anaconda.org/conda-forge/napari-vesicles-segmentation,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/napari-vesicles-segmentation/0.0.1,1.0,0.0,2022-08-18 09:31:54.800000+00:00,2023-06-18 08:42:20.474000+00:00,conda,noarch/napari-vesicles-segmentation-0.0.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image', 'scipy']",noarch,1660814971104.0,None-any-None,pyhd8ed1ab_0,2022-08-18 09:31:55.956000+00:00,0b7bcf18bbfef927ce9a3fdf202b0db9,aaf8f00370a9072363f7b8d84e1f97cec33bbf1123357ad483e80eb4ccada6ba,12282.0,conda-forge/napari-vesicles-segmentation/0.0.1/noarch/napari-vesicles-segmentation-0.0.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-vesicles-segmentation/0.0.1/noarch/napari-vesicles-segmentation-0.0.1-pyhd8ed1ab_0.tar.bz2,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-vesicles-segmentation.make_qwidget,Make segmentation widget,napari_vesicles_segmentation._widget:Segmentation,,,,2.1,napari-vesicles-segmentation,0.0.1,,A simple plugin to detect vesicles in cells images.,"# napari-vesicles-segmentation [![License BSD-3](https://img.shields.io/pypi/l/napari-vesicles-segmentation.svg?color=green)](https://github.com/alexisjapas/napari-vesicles-segmentation/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-vesicles-segmentation.svg?color=green)](https://pypi.org/project/napari-vesicles-segmentation) @@ -40149,8 +42025,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/alexisjapas/napari-vesicles-segmentation,Alexis Japas,alexis.japas@proton.me,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', 'scipy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""scikit-image ; extra == 'testing'"", ""scipy ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/alexisjapas/napari-vesicles-segmentation/issues', 'Documentation, https://github.com/alexisjapas/napari-vesicles-segmentation#README.md', 'Source Code, https://github.com/alexisjapas/napari-vesicles-segmentation', 'User Support, https://github.com/alexisjapas/napari-vesicles-segmentation/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-vesicles-segmentation.make_qwidget,Vesicles Segmentation,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -387,napari-video-cvdask,0.2.1,napari VideoCVDask,A Video File Reader that uses OpenCV2 and Dask Arrays,Nicholas A. Del Grosso,MIT,https://github.com/nickdelgrosso/napari-video-cvdask,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-video-cvdask.get_reader,Open data with napari VideoCVDask,napari_video_cvdask._reader:napari_get_reader,napari-video-cvdask.get_reader,"['*.mp4', '*.mov', '*.avi']",False,2.1,napari-video-cvdask,0.2.1,['UNKNOWN'],A Video File Reader that uses OpenCV2 and Dask Arrays,"# napari-video-cvdask +",text/markdown,https://github.com/alexisjapas/napari-vesicles-segmentation,Alexis Japas,alexis.japas@proton.me,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', 'scipy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""scikit-image ; extra == 'testing'"", ""scipy ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/alexisjapas/napari-vesicles-segmentation/issues', 'Documentation, https://github.com/alexisjapas/napari-vesicles-segmentation#README.md', 'Source Code, https://github.com/alexisjapas/napari-vesicles-segmentation', 'User Support, https://github.com/alexisjapas/napari-vesicles-segmentation/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-vesicles-segmentation.make_qwidget,Vesicles Segmentation,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +405,napari-video-cvdask,0.2.1,napari VideoCVDask,A Video File Reader that uses OpenCV2 and Dask Arrays,Nicholas A. Del Grosso,MIT,https://github.com/nickdelgrosso/napari-video-cvdask,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-video-cvdask.get_reader,Open data with napari VideoCVDask,napari_video_cvdask._reader:napari_get_reader,napari-video-cvdask.get_reader,"['*.mp4', '*.mov', '*.avi']",False,2.1,napari-video-cvdask,0.2.1,['UNKNOWN'],A Video File Reader that uses OpenCV2 and Dask Arrays,"# napari-video-cvdask [![License](https://img.shields.io/pypi/l/napari-video-cvdask.svg?color=green)](https://github.com/nickdelgrosso/napari-video-cvdask/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-video-cvdask.svg?color=green)](https://pypi.org/project/napari-video-cvdask) @@ -40194,8 +42070,8 @@ Distributed under the terms of the [MIT] license, If you encounter any problems, please [file an issue] along with a detailed description. -",text/markdown,https://github.com/nickdelgrosso/napari-video-cvdask,Nicholas A. Del Grosso,delgrosso.nick@gmail.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['dask-image', 'av']",>=3.7,"['Bug Tracker, https://github.com/nickdelgrosso/napari-video-cvdask/issues', 'Documentation, https://github.com/nickdelgrosso/napari-video-cvdask#README.md', 'Source Code, https://github.com/nickdelgrosso/napari-video-cvdask', 'User Support, https://github.com/nickdelgrosso/napari-video-cvdask/issues']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -388,napari-vodex,1.0.12,VoDEx,A napari plugin for VoDEx : Volumetric Data and Experiment Manager. Allows to load volumetric data based on experimental conditions.,Anna Nadtochiy,BSD-3-Clause,https://github.com/LemonJust/napari-vodex,643d759dd52c6a0ecd028ffc,['conda'],,https://github.com/LemonJust/napari-vodex,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-vodex,http://api.anaconda.org/packages/conda-forge/napari-vodex,http://anaconda.org/conda-forge/napari-vodex,"['0.0.6', '1.0.12']",1.0.12,1.0.12,['noarch'],4.0,,['pyhd8ed1ab_0'],0.0.6,conda-forge/napari-vodex/0.0.6,1.0,0.0,2023-04-17 16:36:43.028000+00:00,2023-06-18 17:28:02.151000+00:00,conda,noarch/napari-vodex-0.0.6-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'vodex >=1.0.7']",noarch,1681749283412.0,None-any-None,pyhd8ed1ab_0,2023-04-17 16:36:43.334000+00:00,d6bb359a5d35252bd3d8648375e66e53,d6d3bedf26f305b7ac6257adf276613f5c6c51b77c775d13cfa0183e1f47dba4,23853.0,conda-forge/napari-vodex/0.0.6/noarch/napari-vodex-0.0.6-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-vodex/0.0.6/noarch/napari-vodex-0.0.6-pyhd8ed1ab_0.conda,conda,0.0.6,conda-forge,['main'],public,,0.2.1,napari-vodex.vodex_qwidget,Make vodex widget,napari_vodex._widget:VodexWidget,,,,2.1,napari-vodex,1.0.12,,A napari plugin for VoDEx : Volumetric Data and Experiment Manager. Allows to load volumetric data based on experimental conditions.,"# napari-vodex +",text/markdown,https://github.com/nickdelgrosso/napari-video-cvdask,Nicholas A. Del Grosso,delgrosso.nick@gmail.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['dask-image', 'av']",>=3.7,"['Bug Tracker, https://github.com/nickdelgrosso/napari-video-cvdask/issues', 'Documentation, https://github.com/nickdelgrosso/napari-video-cvdask#README.md', 'Source Code, https://github.com/nickdelgrosso/napari-video-cvdask', 'User Support, https://github.com/nickdelgrosso/napari-video-cvdask/issues']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +406,napari-vodex,1.0.12,VoDEx,A napari plugin for VoDEx : Volumetric Data and Experiment Manager. Allows to load volumetric data based on experimental conditions.,Anna Nadtochiy,BSD-3-Clause,https://github.com/LemonJust/napari-vodex,643d759dd52c6a0ecd028ffc,['conda'],,https://github.com/LemonJust/napari-vodex,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-vodex,http://api.anaconda.org/packages/conda-forge/napari-vodex,http://anaconda.org/conda-forge/napari-vodex,"['0.0.6', '1.0.12']",1.0.12,1.0.12,['noarch'],4.0,,['pyhd8ed1ab_0'],0.0.6,conda-forge/napari-vodex/0.0.6,1.0,0.0,2023-04-17 16:36:43.028000+00:00,2023-06-18 17:28:02.151000+00:00,conda,noarch/napari-vodex-0.0.6-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'vodex >=1.0.7']",noarch,1681749283412.0,None-any-None,pyhd8ed1ab_0,2023-04-17 16:36:43.334000+00:00,d6bb359a5d35252bd3d8648375e66e53,d6d3bedf26f305b7ac6257adf276613f5c6c51b77c775d13cfa0183e1f47dba4,23853.0,conda-forge/napari-vodex/0.0.6/noarch/napari-vodex-0.0.6-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-vodex/0.0.6/noarch/napari-vodex-0.0.6-pyhd8ed1ab_0.conda,conda,0.0.6,conda-forge,['main'],public,,0.2.1,napari-vodex.vodex_qwidget,Make vodex widget,napari_vodex._widget:VodexWidget,,,,2.1,napari-vodex,1.0.12,,A napari plugin for VoDEx : Volumetric Data and Experiment Manager. Allows to load volumetric data based on experimental conditions.,"# napari-vodex [![License BSD-3](https://img.shields.io/pypi/l/napari-vodex.svg?color=green)](https://github.com/LemonJust/napari-vodex/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-vodex.svg?color=green)](https://pypi.org/project/napari-vodex) @@ -40266,8 +42142,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/LemonJust/napari-vodex,Anna Nadtochiy,lemonjustgithub@gmail.com,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['vodex (>=1.0.12)', 'numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/LemonJust/napari-vodex/issues', 'Documentation, https://lemonjust.github.io/vodex/napari/', 'Source Code, https://github.com/LemonJust/napari-vodex', 'User Support, https://github.com/LemonJust/napari-vodex/issues']",['testing'],False,1.0.12,conda-forge/napari-vodex/1.0.12,,,,,conda,noarch/napari-vodex-1.0.12-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'vodex >=1.0.7']",pyhd8ed1ab_0,1681772804225.0,None-any-None,noarch,2023-04-17 23:08:39.379000+00:00,4e809c43c6daf52565c36d69c59af74e,17e09e4fd2e90d045934d8612392d98629af39ef7c145eb8586cb28495fb974e,26137.0,conda-forge/napari-vodex/1.0.12/noarch/napari-vodex-1.0.12-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-vodex/1.0.12/noarch/napari-vodex-1.0.12-pyhd8ed1ab_0.conda,conda,1.0.12,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-vodex.vodex_qwidget,Vodex Data Loader,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -389,napari-workflow-inspector,0.2.2,napari-workflow-inspector,Inspect relationships between image processing operations in active workflows in napari,Robert Haase,BSD-3-Clause,https://github.com/haesleinhuepf/napari-workflow-inspector,61fe7301a3c32938bdf36e42,['conda'],,https://github.com/haesleinhuepf/napari-workflow-inspector,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-workflow-inspector,http://api.anaconda.org/packages/conda-forge/napari-workflow-inspector,http://anaconda.org/conda-forge/napari-workflow-inspector,"['0.1.3', '0.2.0', '0.2.1', '0.2.2']",0.2.2,0.2.2,['noarch'],6.0,,['pyhd8ed1ab_0'],0.1.3,conda-forge/napari-workflow-inspector/0.1.3,1.0,0.0,2022-02-05 12:52:15.203000+00:00,2023-06-18 08:40:47.517000+00:00,conda,noarch/napari-workflow-inspector-0.1.3-pyhd8ed1ab_0.tar.bz2,0.0,GPL-2.0,False,python,"['matplotlib-base', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'python >=3.7', 'python-igraph']",noarch,1644065372882.0,None-any-None,pyhd8ed1ab_0,2022-02-05 12:52:15.657000+00:00,9f846a0d27aaa2019b42cf5d24f222c9,None,17650.0,conda-forge/napari-workflow-inspector/0.1.3/noarch/napari-workflow-inspector-0.1.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-workflow-inspector/0.1.3/noarch/napari-workflow-inspector-0.1.3-pyhd8ed1ab_0.tar.bz2,conda,0.1.3,conda-forge,['main'],public,,0.2.1,napari-workflow-inspector.WorkflowWidget,WorkflowWidget,napari_workflow_inspector._dock_widget:WorkflowWidget,,,,2.1,napari-workflow-inspector,0.2.2,['UNKNOWN'],Inspect relationships between image processing operations in active workflows in napari,"# napari-workflow-inspector +",text/markdown,https://github.com/LemonJust/napari-vodex,Anna Nadtochiy,lemonjustgithub@gmail.com,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['vodex (>=1.0.12)', 'numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/LemonJust/napari-vodex/issues', 'Documentation, https://lemonjust.github.io/vodex/napari/', 'Source Code, https://github.com/LemonJust/napari-vodex', 'User Support, https://github.com/LemonJust/napari-vodex/issues']",['testing'],False,1.0.12,conda-forge/napari-vodex/1.0.12,,,,,conda,noarch/napari-vodex-1.0.12-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'vodex >=1.0.7']",pyhd8ed1ab_0,1681772804225.0,None-any-None,noarch,2023-04-17 23:08:39.379000+00:00,4e809c43c6daf52565c36d69c59af74e,17e09e4fd2e90d045934d8612392d98629af39ef7c145eb8586cb28495fb974e,26137.0,conda-forge/napari-vodex/1.0.12/noarch/napari-vodex-1.0.12-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-vodex/1.0.12/noarch/napari-vodex-1.0.12-pyhd8ed1ab_0.conda,conda,1.0.12,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-vodex.vodex_qwidget,Vodex Data Loader,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +407,napari-workflow-inspector,0.2.2,napari-workflow-inspector,Inspect relationships between image processing operations in active workflows in napari,Robert Haase,BSD-3-Clause,https://github.com/haesleinhuepf/napari-workflow-inspector,61fe7301a3c32938bdf36e42,['conda'],,https://github.com/haesleinhuepf/napari-workflow-inspector,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-workflow-inspector,http://api.anaconda.org/packages/conda-forge/napari-workflow-inspector,http://anaconda.org/conda-forge/napari-workflow-inspector,"['0.1.3', '0.2.0', '0.2.1', '0.2.2']",0.2.2,0.2.2,['noarch'],6.0,,['pyhd8ed1ab_0'],0.1.3,conda-forge/napari-workflow-inspector/0.1.3,1.0,0.0,2022-02-05 12:52:15.203000+00:00,2023-06-18 08:40:47.517000+00:00,conda,noarch/napari-workflow-inspector-0.1.3-pyhd8ed1ab_0.tar.bz2,0.0,GPL-2.0,False,python,"['matplotlib-base', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'numpy', 'python >=3.7', 'python-igraph']",noarch,1644065372882.0,None-any-None,pyhd8ed1ab_0,2022-02-05 12:52:15.657000+00:00,9f846a0d27aaa2019b42cf5d24f222c9,None,17650.0,conda-forge/napari-workflow-inspector/0.1.3/noarch/napari-workflow-inspector-0.1.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-workflow-inspector/0.1.3/noarch/napari-workflow-inspector-0.1.3-pyhd8ed1ab_0.tar.bz2,conda,0.1.3,conda-forge,['main'],public,,0.2.1,napari-workflow-inspector.WorkflowWidget,WorkflowWidget,napari_workflow_inspector._dock_widget:WorkflowWidget,,,,2.1,napari-workflow-inspector,0.2.2,['UNKNOWN'],Inspect relationships between image processing operations in active workflows in napari,"# napari-workflow-inspector [![License](https://img.shields.io/pypi/l/napari-workflow-inspector.svg?color=green)](https://github.com/haesleinhuepf/napari-workflow-inspector/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-workflow-inspector.svg?color=green)](https://pypi.org/project/napari-workflow-inspector) @@ -40330,8 +42206,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/haesleinhuepf/napari-workflow-inspector,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Topic :: Scientific/Engineering :: Medical Science Apps.', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari-tools-menu', 'networkx', 'matplotlib', 'napari-workflows']",>=3.7,"['Bug Tracker, https://github.com/haesleinhuepf/napari-workflow-inspector/issues', 'Documentation, https://github.com/haesleinhuepf/napari-workflow-inspector#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-workflow-inspector', 'User Support, https://github.com/haesleinhuepf/napari-workflow-inspector/issues']",,True,0.2.0,conda-forge/napari-workflow-inspector/0.2.0,0.2.1,conda-forge/napari-workflow-inspector/0.2.1,0.2.2,conda-forge/napari-workflow-inspector/0.2.2,conda,noarch/napari-workflow-inspector-0.2.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['matplotlib-base', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'networkx', 'numpy', 'python >=3.7']",pyhd8ed1ab_0,1646860147239.0,None-any-None,noarch,2022-03-09 21:11:21.265000+00:00,4971edfa17f9d72242bbe1a640eb508e,None,11549.0,conda-forge/napari-workflow-inspector/0.2.0/noarch/napari-workflow-inspector-0.2.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-workflow-inspector/0.2.0/noarch/napari-workflow-inspector-0.2.0-pyhd8ed1ab_0.tar.bz2,conda,0.2.0,conda-forge,['main'],conda,noarch/napari-workflow-inspector-0.2.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['matplotlib-base', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'networkx', 'numpy', 'python >=3.7']",noarch,1650050099008.0,None-any-None,pyhd8ed1ab_0,2022-04-15 19:17:08.107000+00:00,efc99aeac0037d9917eb90627e5815e2,None,11530.0,conda-forge/napari-workflow-inspector/0.2.1/noarch/napari-workflow-inspector-0.2.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-workflow-inspector/0.2.1/noarch/napari-workflow-inspector-0.2.1-pyhd8ed1ab_0.tar.bz2,conda,0.2.1,conda-forge,['main'],conda,noarch/napari-workflow-inspector-0.2.2-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['matplotlib-base', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'networkx', 'numpy', 'python >=3.7']",BSD-3-Clause,python,1652631977472.0,2022-05-15 16:28:43.801000+00:00,68448a22b154c76320207f9ae18dd323,None,12016.0,conda-forge/napari-workflow-inspector/0.2.2/noarch/napari-workflow-inspector-0.2.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-workflow-inspector/0.2.2/noarch/napari-workflow-inspector-0.2.2-pyhd8ed1ab_0.tar.bz2,conda,0.2.2,conda-forge,['main'],,,,,,,,,,,napari-workflow-inspector.WorkflowWidget,WorkflowWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -390,napari-workflow-optimizer,0.1.4,napari-workflow-optimizer,Optimize image processing workflows in napari for segmentation quality,Robert Haase,BSD-3-Clause,https://github.com/haesleinhuepf/napari-workflow-optimizer,620a250b27bdd9a91c320833,['conda'],,https://github.com/haesleinhuepf/napari-workflow-optimizer,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-workflow-optimizer,http://api.anaconda.org/packages/conda-forge/napari-workflow-optimizer,http://anaconda.org/conda-forge/napari-workflow-optimizer,"['0.1.3', '0.1.4']",0.1.4,0.1.4,['noarch'],4.0,,['pyhd8ed1ab_0'],0.1.3,conda-forge/napari-workflow-optimizer/0.1.3,1.0,0.0,2022-02-14 09:46:48.894000+00:00,2023-06-18 08:40:51.492000+00:00,conda,noarch/napari-workflow-optimizer-0.1.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['matplotlib-base', 'napari-plugin-engine >=0.1.4', 'napari-time-slicer', 'napari-workflows', 'numpy', 'pyclesperanto-prototype', 'python >=3.7', 'scikit-learn', 'scipy']",noarch,1644831845199.0,None-any-None,pyhd8ed1ab_0,2022-02-14 09:46:49.385000+00:00,629fd74f8219b1e8e726eebf026eba59,None,18481.0,conda-forge/napari-workflow-optimizer/0.1.3/noarch/napari-workflow-optimizer-0.1.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-workflow-optimizer/0.1.3/noarch/napari-workflow-optimizer-0.1.3-pyhd8ed1ab_0.tar.bz2,conda,0.1.3,conda-forge,['main'],public,,0.2.1,napari-workflow-optimizer.WorkflowOptimizer,WorkflowOptimizer,napari_workflow_optimizer.gui._dock_widget:WorkflowOptimizer,,,,2.1,napari-workflow-optimizer,0.1.4,['UNKNOWN'],Optimize image processing workflows in napari for segmentation quality,"# napari-workflow-optimizer +",text/markdown,https://github.com/haesleinhuepf/napari-workflow-inspector,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Topic :: Scientific/Engineering :: Medical Science Apps.', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari-tools-menu', 'networkx', 'matplotlib', 'napari-workflows']",>=3.7,"['Bug Tracker, https://github.com/haesleinhuepf/napari-workflow-inspector/issues', 'Documentation, https://github.com/haesleinhuepf/napari-workflow-inspector#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-workflow-inspector', 'User Support, https://github.com/haesleinhuepf/napari-workflow-inspector/issues']",,True,0.2.0,conda-forge/napari-workflow-inspector/0.2.0,0.2.1,conda-forge/napari-workflow-inspector/0.2.1,0.2.2,conda-forge/napari-workflow-inspector/0.2.2,conda,noarch/napari-workflow-inspector-0.2.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['matplotlib-base', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'networkx', 'numpy', 'python >=3.7']",pyhd8ed1ab_0,1646860147239.0,None-any-None,noarch,2022-03-09 21:11:21.265000+00:00,4971edfa17f9d72242bbe1a640eb508e,None,11549.0,conda-forge/napari-workflow-inspector/0.2.0/noarch/napari-workflow-inspector-0.2.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-workflow-inspector/0.2.0/noarch/napari-workflow-inspector-0.2.0-pyhd8ed1ab_0.tar.bz2,conda,0.2.0,conda-forge,['main'],conda,noarch/napari-workflow-inspector-0.2.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['matplotlib-base', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'networkx', 'numpy', 'python >=3.7']",noarch,1650050099008.0,None-any-None,pyhd8ed1ab_0,2022-04-15 19:17:08.107000+00:00,efc99aeac0037d9917eb90627e5815e2,None,11530.0,conda-forge/napari-workflow-inspector/0.2.1/noarch/napari-workflow-inspector-0.2.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-workflow-inspector/0.2.1/noarch/napari-workflow-inspector-0.2.1-pyhd8ed1ab_0.tar.bz2,conda,0.2.1,conda-forge,['main'],conda,noarch/napari-workflow-inspector-0.2.2-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['matplotlib-base', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'napari-workflows', 'networkx', 'numpy', 'python >=3.7']",BSD-3-Clause,python,1652631977472.0,2022-05-15 16:28:43.801000+00:00,68448a22b154c76320207f9ae18dd323,None,12016.0,conda-forge/napari-workflow-inspector/0.2.2/noarch/napari-workflow-inspector-0.2.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-workflow-inspector/0.2.2/noarch/napari-workflow-inspector-0.2.2-pyhd8ed1ab_0.tar.bz2,conda,0.2.2,conda-forge,['main'],,,,,,,,,,,napari-workflow-inspector.WorkflowWidget,WorkflowWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +408,napari-workflow-optimizer,0.1.4,napari-workflow-optimizer,Optimize image processing workflows in napari for segmentation quality,Robert Haase,BSD-3-Clause,https://github.com/haesleinhuepf/napari-workflow-optimizer,620a250b27bdd9a91c320833,['conda'],,https://github.com/haesleinhuepf/napari-workflow-optimizer,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-workflow-optimizer,http://api.anaconda.org/packages/conda-forge/napari-workflow-optimizer,http://anaconda.org/conda-forge/napari-workflow-optimizer,"['0.1.3', '0.1.4']",0.1.4,0.1.4,['noarch'],4.0,,['pyhd8ed1ab_0'],0.1.3,conda-forge/napari-workflow-optimizer/0.1.3,1.0,0.0,2022-02-14 09:46:48.894000+00:00,2023-06-18 08:40:51.492000+00:00,conda,noarch/napari-workflow-optimizer-0.1.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['matplotlib-base', 'napari-plugin-engine >=0.1.4', 'napari-time-slicer', 'napari-workflows', 'numpy', 'pyclesperanto-prototype', 'python >=3.7', 'scikit-learn', 'scipy']",noarch,1644831845199.0,None-any-None,pyhd8ed1ab_0,2022-02-14 09:46:49.385000+00:00,629fd74f8219b1e8e726eebf026eba59,None,18481.0,conda-forge/napari-workflow-optimizer/0.1.3/noarch/napari-workflow-optimizer-0.1.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-workflow-optimizer/0.1.3/noarch/napari-workflow-optimizer-0.1.3-pyhd8ed1ab_0.tar.bz2,conda,0.1.3,conda-forge,['main'],public,,0.2.1,napari-workflow-optimizer.WorkflowOptimizer,WorkflowOptimizer,napari_workflow_optimizer.gui._dock_widget:WorkflowOptimizer,,,,2.1,napari-workflow-optimizer,0.1.4,['UNKNOWN'],Optimize image processing workflows in napari for segmentation quality,"# napari-workflow-optimizer [![License](https://img.shields.io/pypi/l/napari-workflow-optimizer.svg?color=green)](https://github.com/haesleinhuepf/napari-workflow-optimizer/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-workflow-optimizer.svg?color=green)](https://pypi.org/project/napari-workflow-optimizer) @@ -40506,8 +42382,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/haesleinhuepf/napari-workflow-optimizer,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'pyclesperanto-prototype', 'scikit-learn', 'napari-time-slicer', 'matplotlib', 'scipy', 'napari-workflows', 'napari-assistant (>=0.1.9)']",>=3.7,"['Bug Tracker, https://github.com/haesleinhuepf/napari-workflow-optimizer/issues', 'Documentation, https://github.com/haesleinhuepf/napari-workflow-optimizer#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-workflow-optimizer', 'User Support, https://github.com/haesleinhuepf/napari-workflow-optimizer/issues']",,True,0.1.4,conda-forge/napari-workflow-optimizer/0.1.4,,,,,conda,noarch/napari-workflow-optimizer-0.1.4-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['matplotlib-base', 'napari-plugin-engine >=0.1.4', 'napari-time-slicer', 'napari-workflows', 'numpy', 'pyclesperanto-prototype', 'python >=3.7', 'scikit-learn', 'scipy']",pyhd8ed1ab_0,1650055381262.0,None-any-None,noarch,2022-04-15 20:45:30.467000+00:00,0f5ac52488bbae89c5abc4a9cb4660f5,None,18518.0,conda-forge/napari-workflow-optimizer/0.1.4/noarch/napari-workflow-optimizer-0.1.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-workflow-optimizer/0.1.4/noarch/napari-workflow-optimizer-0.1.4-pyhd8ed1ab_0.tar.bz2,conda,0.1.4,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-workflow-optimizer.WorkflowOptimizer,WorkflowOptimizer,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -391,napari-workshop-browser,0.0.3,Napari Workshop Browser,A plugin to browse and follow napari workshops,Kyle Harrington,BSD-3-Clause,https://github.com/kephale/napari-workshop-browser,64b570f72fef38c226db8d4c,['conda'],,https://github.com/kephale/napari-workshop-browser,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-workshop-browser,http://api.anaconda.org/packages/conda-forge/napari-workshop-browser,http://anaconda.org/conda-forge/napari-workshop-browser,"['0.0.1', '0.0.2', '0.0.3']",0.0.3,0.0.3,['noarch'],7.0,,['pyh9208f05_0'],0.0.1,conda-forge/napari-workshop-browser/0.0.1,1.0,0.0,2023-07-17 16:48:53.086000+00:00,2023-10-18 16:43:12.625000+00:00,conda,noarch/napari-workshop-browser-0.0.1-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['appdirs', 'jupytext', 'napari', 'notebook <7.0a0', 'numpy', 'python >=3.8', 'qtpy', 'requests', 'superqt']",noarch,1689612403161.0,None-any-None,pyh9208f05_0,2023-07-17 16:48:53.407000+00:00,3757e23cbf5d2a5ed6bca2e27791c369,ab64ca6ddaf6379d90cc5389c486e3ec3963fec4f0b3df2d98a29b16d2615aff,13049.0,conda-forge/napari-workshop-browser/0.0.1/noarch/napari-workshop-browser-0.0.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-workshop-browser/0.0.1/noarch/napari-workshop-browser-0.0.1-pyh9208f05_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-workshop-browser.make_qwidget,Open a napari workshop,napari_workshop_browser._widget:WorkshopWidget,,,,2.1,napari-workshop-browser,0.0.3,,A plugin to browse and follow napari workshops,"# napari-workshop-browser +",text/markdown,https://github.com/haesleinhuepf/napari-workflow-optimizer,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'pyclesperanto-prototype', 'scikit-learn', 'napari-time-slicer', 'matplotlib', 'scipy', 'napari-workflows', 'napari-assistant (>=0.1.9)']",>=3.7,"['Bug Tracker, https://github.com/haesleinhuepf/napari-workflow-optimizer/issues', 'Documentation, https://github.com/haesleinhuepf/napari-workflow-optimizer#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-workflow-optimizer', 'User Support, https://github.com/haesleinhuepf/napari-workflow-optimizer/issues']",,True,0.1.4,conda-forge/napari-workflow-optimizer/0.1.4,,,,,conda,noarch/napari-workflow-optimizer-0.1.4-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['matplotlib-base', 'napari-plugin-engine >=0.1.4', 'napari-time-slicer', 'napari-workflows', 'numpy', 'pyclesperanto-prototype', 'python >=3.7', 'scikit-learn', 'scipy']",pyhd8ed1ab_0,1650055381262.0,None-any-None,noarch,2022-04-15 20:45:30.467000+00:00,0f5ac52488bbae89c5abc4a9cb4660f5,None,18518.0,conda-forge/napari-workflow-optimizer/0.1.4/noarch/napari-workflow-optimizer-0.1.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-workflow-optimizer/0.1.4/noarch/napari-workflow-optimizer-0.1.4-pyhd8ed1ab_0.tar.bz2,conda,0.1.4,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-workflow-optimizer.WorkflowOptimizer,WorkflowOptimizer,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +409,napari-workshop-browser,0.0.3,Napari Workshop Browser,A plugin to browse and follow napari workshops,Kyle Harrington,BSD-3-Clause,https://github.com/kephale/napari-workshop-browser,64b570f72fef38c226db8d4c,['conda'],,https://github.com/kephale/napari-workshop-browser,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-workshop-browser,http://api.anaconda.org/packages/conda-forge/napari-workshop-browser,http://anaconda.org/conda-forge/napari-workshop-browser,"['0.0.1', '0.0.2', '0.0.3']",0.0.3,0.0.3,['noarch'],7.0,,['pyh9208f05_0'],0.0.1,conda-forge/napari-workshop-browser/0.0.1,1.0,0.0,2023-07-17 16:48:53.086000+00:00,2023-10-18 16:43:12.625000+00:00,conda,noarch/napari-workshop-browser-0.0.1-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['appdirs', 'jupytext', 'napari', 'notebook <7.0a0', 'numpy', 'python >=3.8', 'qtpy', 'requests', 'superqt']",noarch,1689612403161.0,None-any-None,pyh9208f05_0,2023-07-17 16:48:53.407000+00:00,3757e23cbf5d2a5ed6bca2e27791c369,ab64ca6ddaf6379d90cc5389c486e3ec3963fec4f0b3df2d98a29b16d2615aff,13049.0,conda-forge/napari-workshop-browser/0.0.1/noarch/napari-workshop-browser-0.0.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-workshop-browser/0.0.1/noarch/napari-workshop-browser-0.0.1-pyh9208f05_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,napari-workshop-browser.make_qwidget,Open a napari workshop,napari_workshop_browser._widget:WorkshopWidget,,,,2.1,napari-workshop-browser,0.0.3,,A plugin to browse and follow napari workshops,"# napari-workshop-browser [![License BSD-3](https://img.shields.io/pypi/l/napari-workshop-browser.svg?color=green)](https://github.com/kephale/napari-workshop-browser/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-workshop-browser.svg?color=green)](https://pypi.org/project/napari-workshop-browser) @@ -40584,8 +42460,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/kephale/napari-workshop-browser,Kyle Harrington,napari@kyleharrington.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'superqt', 'qtpy', 'notebook <7.0.0', 'jupytext', 'napari', 'appdirs', 'requests', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/kephale/napari-workshop-browser/issues', 'Documentation, https://github.com/kephale/napari-workshop-browser#README.md', 'Source Code, https://github.com/kephale/napari-workshop-browser', 'User Support, https://github.com/kephale/napari-workshop-browser/issues']",['testing'],False,0.0.2,conda-forge/napari-workshop-browser/0.0.2,0.0.3,conda-forge/napari-workshop-browser/0.0.3,,,conda,noarch/napari-workshop-browser-0.0.2-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['appdirs', 'jupytext', 'napari', 'notebook <7.0a0', 'numpy', 'python >=3.8', 'qtpy', 'requests', 'superqt']",pyh9208f05_0,1690319674102.0,None-any-None,noarch,2023-07-25 21:16:59.916000+00:00,92be122caf28ecce5abce537dc377605,b9b5fbd31b8f475aeacd0eef423779d9bee4862ac4dfe15519815a41b1d78fb0,13154.0,conda-forge/napari-workshop-browser/0.0.2/noarch/napari-workshop-browser-0.0.2-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-workshop-browser/0.0.2/noarch/napari-workshop-browser-0.0.2-pyh9208f05_0.conda,conda,0.0.2,conda-forge,['main'],conda,noarch/napari-workshop-browser-0.0.3-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['appdirs', 'jupytext', 'napari', 'notebook <7.0.0', 'numpy', 'python >=3.8', 'qtpy', 'requests', 'superqt']",noarch,1697647256036.0,None-any-None,pyh9208f05_0,2023-10-18 16:43:10.446000+00:00,0a1db70fd95752b6a37b11bdac02f12a,2f149bc88aa540297070f727263496ed64a77a0db27bc743f328220975ce2177,13163.0,conda-forge/napari-workshop-browser/0.0.3/noarch/napari-workshop-browser-0.0.3-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-workshop-browser/0.0.3/noarch/napari-workshop-browser-0.0.3-pyh9208f05_0.conda,conda,0.0.3,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-workshop-browser.make_qwidget,Open a napari workshop,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -392,napari-workshop-plugin,1.0.4,Workshop 2023 demo plugin,A plugin to demonstrate some concepts from the 2023 workshop on software development related to napari,MetaCell,MIT,https://www.napari-hub.org/plugins/napari-workshop-plugin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.0,napari-workshop-plugin.get_reader,Open data with Workshop 2023 demo plugin,napari_workshop_plugin._reader:napari_get_reader,napari-workshop-plugin.get_reader,['*.npy'],False,2.1,napari-workshop-plugin,1.0.4,,A plugin to demonstrate some concepts from the 2023 workshop on software development related to napari,"# napari-workshop-plugin +",text/markdown,https://github.com/kephale/napari-workshop-browser,Kyle Harrington,napari@kyleharrington.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'superqt', 'qtpy', 'notebook <7.0.0', 'jupytext', 'napari', 'appdirs', 'requests', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/kephale/napari-workshop-browser/issues', 'Documentation, https://github.com/kephale/napari-workshop-browser#README.md', 'Source Code, https://github.com/kephale/napari-workshop-browser', 'User Support, https://github.com/kephale/napari-workshop-browser/issues']",['testing'],False,0.0.2,conda-forge/napari-workshop-browser/0.0.2,0.0.3,conda-forge/napari-workshop-browser/0.0.3,,,conda,noarch/napari-workshop-browser-0.0.2-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['appdirs', 'jupytext', 'napari', 'notebook <7.0a0', 'numpy', 'python >=3.8', 'qtpy', 'requests', 'superqt']",pyh9208f05_0,1690319674102.0,None-any-None,noarch,2023-07-25 21:16:59.916000+00:00,92be122caf28ecce5abce537dc377605,b9b5fbd31b8f475aeacd0eef423779d9bee4862ac4dfe15519815a41b1d78fb0,13154.0,conda-forge/napari-workshop-browser/0.0.2/noarch/napari-workshop-browser-0.0.2-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-workshop-browser/0.0.2/noarch/napari-workshop-browser-0.0.2-pyh9208f05_0.conda,conda,0.0.2,conda-forge,['main'],conda,noarch/napari-workshop-browser-0.0.3-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['appdirs', 'jupytext', 'napari', 'notebook <7.0.0', 'numpy', 'python >=3.8', 'qtpy', 'requests', 'superqt']",noarch,1697647256036.0,None-any-None,pyh9208f05_0,2023-10-18 16:43:10.446000+00:00,0a1db70fd95752b6a37b11bdac02f12a,2f149bc88aa540297070f727263496ed64a77a0db27bc743f328220975ce2177,13163.0,conda-forge/napari-workshop-browser/0.0.3/noarch/napari-workshop-browser-0.0.3-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-workshop-browser/0.0.3/noarch/napari-workshop-browser-0.0.3-pyh9208f05_0.conda,conda,0.0.3,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-workshop-browser.make_qwidget,Open a napari workshop,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +410,napari-workshop-plugin,1.0.4,Workshop 2023 demo plugin,A plugin to demonstrate some concepts from the 2023 workshop on software development related to napari,MetaCell,MIT,https://www.napari-hub.org/plugins/napari-workshop-plugin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.0,napari-workshop-plugin.get_reader,Open data with Workshop 2023 demo plugin,napari_workshop_plugin._reader:napari_get_reader,napari-workshop-plugin.get_reader,['*.npy'],False,2.1,napari-workshop-plugin,1.0.4,,A plugin to demonstrate some concepts from the 2023 workshop on software development related to napari,"# napari-workshop-plugin [![License MIT](https://img.shields.io/pypi/l/napari-workshop-plugin.svg?color=green)](https://github.com/MetaCell/napari-workshop-plugin/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-workshop-plugin.svg?color=green)](https://pypi.org/project/napari-workshop-plugin) @@ -40633,8 +42509,8 @@ If you encounter any problems, please file an issue along with a detailed descri [MIT]: http://opensource.org/licenses/MIT [cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin [pip]: https://pypi.org/project/pip/ -",text/markdown,https://www.napari-hub.org/plugins/napari-workshop-plugin,MetaCell,sean.martin@metacell.us,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy <2,>=1.23', 'magicgui', 'qtpy', ""mkdocs-material ; extra == 'docs'"", ""mkdocstrings-python ; extra == 'docs'"", ""mkdocstrings ; extra == 'docs'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/seankmartin/napari-software-development-workshop/issues', 'Documentation, https://seankmartin.github.io/napari-software-development-workshop/', 'Source Code, https://github.com/seankmartin/napari-software-development-workshop', 'User Support, https://napari.zulipchat.com']","['docs', 'testing']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Dataset', 'Image Processing']",napari-workshop-plugin.make_widget,Make example Segmentation Widget,napari_workshop_plugin._widget:segmentation_widget,napari-workshop-plugin.sample_data,Example data of a calcium imaging max projection,napari_workshop_plugin._sample_data:load_sample_data,,,,napari-workshop-plugin.make_widget,Segmentation demo widget,False,,,,,,,,,,,,,,,,,,,,napari-workshop-plugin.sample_data,sample_data,Calcium imaging data,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -393,napari-wsi,0.1.4,WSI Reader,A plugin to read whole slide images within napari.,Philipp Plewa,Apache-2.0,https://github.com/AstraZeneca/napari-wsi,6425be0a6d688545034d61a1,['conda'],,https://github.com/AstraZeneca/napari-wsi,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-wsi,http://api.anaconda.org/packages/conda-forge/napari-wsi,http://anaconda.org/conda-forge/napari-wsi,"['0.1.0', '0.1.2', '0.1.3']",0.1.2,0.1.3,['noarch'],5.0,,['pyhd8ed1ab_0'],0.1.0,conda-forge/napari-wsi/0.1.0,1.0,0.0,2023-03-30 16:51:19.231000+00:00,2023-08-22 15:06:26.849000+00:00,conda,noarch/napari-wsi-0.1.0-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['dask-core >=2022', 'imagecodecs >=2022', 'magicgui <1.0.0', 'matplotlib-base >=3.0.0,<4.0.0', 'napari >=0.4.0,<0.5.0', 'numpy >=1.0.0,<2.0.0', 'pydantic !=1.10.0', 'python >=3.8,<3.11', 'rasterio >=1.0.0,<2.0.0', 'tifffile >=2022', 'zarr >=2.0.0,<3.0.0']",noarch,1680194892959.0,None-any-None,pyhd8ed1ab_0,2023-03-30 16:51:19.865000+00:00,dd39cd6d9f7b802c9b69cb4b75f970d8,deeec97dd830cf4fccf6a02e91eafa204d6a5590aee2fbdd4a0e513721067f2e,18629.0,conda-forge/napari-wsi/0.1.0/noarch/napari-wsi-0.1.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-wsi/0.1.0/noarch/napari-wsi-0.1.0-pyhd8ed1ab_0.conda,conda,0.1.0,conda-forge,['main'],public,,0.2.1,napari-wsi.get_wsi_reader,A reader for whole slide image data.,napari_wsi.reader:get_wsi_reader,napari-wsi.get_wsi_reader,"['*.bif', '*.ndpi', '*.qptiff', '*.scn', '*.svs', '*.tif', '*.tiff']",False,2.1,napari-wsi,0.1.4,,A plugin to read whole slide images within napari.,"# napari-wsi +",text/markdown,https://www.napari-hub.org/plugins/napari-workshop-plugin,MetaCell,sean.martin@metacell.us,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy <2,>=1.23', 'magicgui', 'qtpy', ""mkdocs-material ; extra == 'docs'"", ""mkdocstrings-python ; extra == 'docs'"", ""mkdocstrings ; extra == 'docs'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/seankmartin/napari-software-development-workshop/issues', 'Documentation, https://seankmartin.github.io/napari-software-development-workshop/', 'Source Code, https://github.com/seankmartin/napari-software-development-workshop', 'User Support, https://napari.zulipchat.com']","['docs', 'testing']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Dataset', 'Image Processing']",napari-workshop-plugin.make_widget,Make example Segmentation Widget,napari_workshop_plugin._widget:segmentation_widget,napari-workshop-plugin.sample_data,Example data of a calcium imaging max projection,napari_workshop_plugin._sample_data:load_sample_data,,,,napari-workshop-plugin.make_widget,Segmentation demo widget,False,,,,,,,,,,,,,,,,,,,,napari-workshop-plugin.sample_data,sample_data,Calcium imaging data,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +411,napari-wsi,0.1.4,WSI Reader,A plugin to read whole slide images within napari.,Philipp Plewa,Apache-2.0,https://github.com/AstraZeneca/napari-wsi,6425be0a6d688545034d61a1,['conda'],,https://github.com/AstraZeneca/napari-wsi,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-wsi,http://api.anaconda.org/packages/conda-forge/napari-wsi,http://anaconda.org/conda-forge/napari-wsi,"['0.1.0', '0.1.2', '0.1.3']",0.1.2,0.1.3,['noarch'],5.0,,['pyhd8ed1ab_0'],0.1.0,conda-forge/napari-wsi/0.1.0,1.0,0.0,2023-03-30 16:51:19.231000+00:00,2023-08-22 15:06:26.849000+00:00,conda,noarch/napari-wsi-0.1.0-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['dask-core >=2022', 'imagecodecs >=2022', 'magicgui <1.0.0', 'matplotlib-base >=3.0.0,<4.0.0', 'napari >=0.4.0,<0.5.0', 'numpy >=1.0.0,<2.0.0', 'pydantic !=1.10.0', 'python >=3.8,<3.11', 'rasterio >=1.0.0,<2.0.0', 'tifffile >=2022', 'zarr >=2.0.0,<3.0.0']",noarch,1680194892959.0,None-any-None,pyhd8ed1ab_0,2023-03-30 16:51:19.865000+00:00,dd39cd6d9f7b802c9b69cb4b75f970d8,deeec97dd830cf4fccf6a02e91eafa204d6a5590aee2fbdd4a0e513721067f2e,18629.0,conda-forge/napari-wsi/0.1.0/noarch/napari-wsi-0.1.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-wsi/0.1.0/noarch/napari-wsi-0.1.0-pyhd8ed1ab_0.conda,conda,0.1.0,conda-forge,['main'],public,,0.2.1,napari-wsi.get_wsi_reader,A reader for whole slide image data.,napari_wsi.reader:get_wsi_reader,napari-wsi.get_wsi_reader,"['*.bif', '*.ndpi', '*.qptiff', '*.scn', '*.svs', '*.tif', '*.tiff']",False,2.1,napari-wsi,0.1.4,,A plugin to read whole slide images within napari.,"# napari-wsi [![PyPI](https://img.shields.io/pypi/v/napari-wsi.svg?color=green)](https://pypi.org/project/napari-wsi) [![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-wsi)](https://napari-hub.org/plugins/napari-wsi) @@ -40696,8 +42572,8 @@ viewer.open(""CMU-1.svs"") [rasterio]: https://github.com/rasterio/rasterio [tifffile]: https://github.com/cgohlke/tifffile -",text/markdown,https://github.com/AstraZeneca/napari-wsi,Philipp Plewa,philipp.plewa@astrazeneca.com,Apache-2.0,"['Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']","['dask[array] (>=2023)', 'imagecodecs (>=2023.9.18)', 'magicgui (>=0.7.3)', 'matplotlib (>=3.8)', 'napari (>=0.4.18)', 'numpy (>=1.26)', 'rasterio (>=1.3)', 'tifffile (>=2023)', 'zarr (>=2.16)']",">=3.10,<3.12","['Repository, https://github.com/AstraZeneca/napari-wsi']",,False,0.1.2,conda-forge/napari-wsi/0.1.2,0.1.3,conda-forge/napari-wsi/0.1.3,,,conda,noarch/napari-wsi-0.1.2-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['dask-core >=2022', 'imagecodecs >=2022', 'magicgui <1.0.0', 'matplotlib-base >=3.0.0,<4.0.0', 'napari >=0.4.0,<0.5.0', 'numpy >=1.0.0,<2.0.0', 'pydantic !=1.10.0', 'python >=3.8,<3.11', 'rasterio >=1.0.0,<2.0.0', 'tifffile >=2022', 'zarr >=2.0.0,<3.0.0']",pyhd8ed1ab_0,1680244981105.0,None-any-None,noarch,2023-03-31 06:45:48.726000+00:00,fad4ce3473815cb937cd0efe03155671,00973aabb886cb298af9e5d4d7f9ab37d0e2f5c223d109767305e0223dc5c21a,18612.0,conda-forge/napari-wsi/0.1.2/noarch/napari-wsi-0.1.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-wsi/0.1.2/noarch/napari-wsi-0.1.2-pyhd8ed1ab_0.conda,conda,0.1.2,conda-forge,['main'],conda,noarch/napari-wsi-0.1.3-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['dask-core >=2022', 'imagecodecs >=2022', 'magicgui <1.0.0', 'matplotlib-base >=3.0.0,<4.0.0', 'napari >=0.4.0,<0.5.0', 'numpy >=1.0.0,<2.0.0', 'pydantic !=1.10.0', 'python >=3.8,<3.11', 'rasterio >=1.0.0,<2.0.0', 'tifffile >=2022', 'zarr >=2.0.0,<3.0.0']",noarch,1692716624658.0,None-any-None,pyhd8ed1ab_0,2023-08-22 15:06:04.585000+00:00,3253c6303f5b06dab6c6aa960011452c,84675cc4cbebc325c7e65b203d4db3cb3e2830faa466aab02f19e9cd00bef49f,18927.0,conda-forge/napari-wsi/0.1.3/noarch/napari-wsi-0.1.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-wsi/0.1.3/noarch/napari-wsi-0.1.3-pyhd8ed1ab_0.conda,conda,0.1.3,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,napari-wsi.get_wsi_reader_widget,A widget for reading whole slide image data.,napari_wsi.widget:get_wsi_reader_widget,,,,,,,napari-wsi.get_wsi_reader_widget,WSI Reader,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -394,napari-wsireg,0.1.2,napari-wsireg,plugin to perform whole slide image registration with wsireg,Nathan Heath Patterson,BSD-3-Clause,https://github.com/nhpatterson/napari-wsireg,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-wsireg.make_qwidget,Open wsireg for 2D image registration,napari_wsireg._widget:WsiReg2DMain,,,,2.1,napari-wsireg,0.1.2,,plugin to perform whole slide image registration with wsireg,"# napari-wsireg +",text/markdown,https://github.com/AstraZeneca/napari-wsi,Philipp Plewa,philipp.plewa@astrazeneca.com,Apache-2.0,"['Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']","['dask[array] (>=2023)', 'imagecodecs (>=2023.9.18)', 'magicgui (>=0.7.3)', 'matplotlib (>=3.8)', 'napari (>=0.4.18)', 'numpy (>=1.26)', 'rasterio (>=1.3)', 'tifffile (>=2023)', 'zarr (>=2.16)']",">=3.10,<3.12","['Repository, https://github.com/AstraZeneca/napari-wsi']",,False,0.1.2,conda-forge/napari-wsi/0.1.2,0.1.3,conda-forge/napari-wsi/0.1.3,,,conda,noarch/napari-wsi-0.1.2-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['dask-core >=2022', 'imagecodecs >=2022', 'magicgui <1.0.0', 'matplotlib-base >=3.0.0,<4.0.0', 'napari >=0.4.0,<0.5.0', 'numpy >=1.0.0,<2.0.0', 'pydantic !=1.10.0', 'python >=3.8,<3.11', 'rasterio >=1.0.0,<2.0.0', 'tifffile >=2022', 'zarr >=2.0.0,<3.0.0']",pyhd8ed1ab_0,1680244981105.0,None-any-None,noarch,2023-03-31 06:45:48.726000+00:00,fad4ce3473815cb937cd0efe03155671,00973aabb886cb298af9e5d4d7f9ab37d0e2f5c223d109767305e0223dc5c21a,18612.0,conda-forge/napari-wsi/0.1.2/noarch/napari-wsi-0.1.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-wsi/0.1.2/noarch/napari-wsi-0.1.2-pyhd8ed1ab_0.conda,conda,0.1.2,conda-forge,['main'],conda,noarch/napari-wsi-0.1.3-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['dask-core >=2022', 'imagecodecs >=2022', 'magicgui <1.0.0', 'matplotlib-base >=3.0.0,<4.0.0', 'napari >=0.4.0,<0.5.0', 'numpy >=1.0.0,<2.0.0', 'pydantic !=1.10.0', 'python >=3.8,<3.11', 'rasterio >=1.0.0,<2.0.0', 'tifffile >=2022', 'zarr >=2.0.0,<3.0.0']",noarch,1692716624658.0,None-any-None,pyhd8ed1ab_0,2023-08-22 15:06:04.585000+00:00,3253c6303f5b06dab6c6aa960011452c,84675cc4cbebc325c7e65b203d4db3cb3e2830faa466aab02f19e9cd00bef49f,18927.0,conda-forge/napari-wsi/0.1.3/noarch/napari-wsi-0.1.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-wsi/0.1.3/noarch/napari-wsi-0.1.3-pyhd8ed1ab_0.conda,conda,0.1.3,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,napari-wsi.get_wsi_reader_widget,A widget for reading whole slide image data.,napari_wsi.widget:get_wsi_reader_widget,,,,,,,napari-wsi.get_wsi_reader_widget,WSI Reader,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +412,napari-wsireg,0.1.2,napari-wsireg,plugin to perform whole slide image registration with wsireg,Nathan Heath Patterson,BSD-3-Clause,https://github.com/nhpatterson/napari-wsireg,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-wsireg.make_qwidget,Open wsireg for 2D image registration,napari_wsireg._widget:WsiReg2DMain,,,,2.1,napari-wsireg,0.1.2,,plugin to perform whole slide image registration with wsireg,"# napari-wsireg ![Alt text](https://github.com/NHPatterson/napari-wsireg/blob/main/src/napari_wsireg/gui/resources/wsireg-logo-light.svg?raw=true ""wsireg"") @@ -40774,8 +42650,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/nhpatterson/napari-wsireg,Nathan Heath Patterson,heath.patterson@vanderbilt.edu,BSD-3-Clause,"['Development Status :: 4 - Beta', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Topic :: Software Development :: Testing']","['wsireg (>=0.3.6)', 'SimpleITK', 'czifile', 'dask', 'imagecodecs', 'napari', 'numpy', 'ome-types', 'pint', 'qtpy', 'tifffile', 'zarr (>=2.10.3)', 'napari-geojson', 'networkx', 'matplotlib']",>=3.8,"['Bug Tracker, https://github.com/nhpatterson/napari-wsireg/issues', 'Documentation, https://github.com/nhpatterson/napari-wsireg#README.md', 'Source Code, https://github.com/nhpatterson/napari-wsireg', 'User Support, https://github.com/nhpatterson/napari-wsireg/issues']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-wsireg.make_qwidget,wsireg2D Main,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -395,napari-xgboost,0.1.0,Pixel Classification XGBoost,A plugin for pixel classification using XGBoost,Robert Haase," +",text/markdown,https://github.com/nhpatterson/napari-wsireg,Nathan Heath Patterson,heath.patterson@vanderbilt.edu,BSD-3-Clause,"['Development Status :: 4 - Beta', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Topic :: Software Development :: Testing']","['wsireg (>=0.3.6)', 'SimpleITK', 'czifile', 'dask', 'imagecodecs', 'napari', 'numpy', 'ome-types', 'pint', 'qtpy', 'tifffile', 'zarr (>=2.10.3)', 'napari-geojson', 'networkx', 'matplotlib']",>=3.8,"['Bug Tracker, https://github.com/nhpatterson/napari-wsireg/issues', 'Documentation, https://github.com/nhpatterson/napari-wsireg#README.md', 'Source Code, https://github.com/nhpatterson/napari-wsireg', 'User Support, https://github.com/nhpatterson/napari-wsireg/issues']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-wsireg.make_qwidget,wsireg2D Main,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +413,napari-xgboost,0.1.0,Pixel Classification XGBoost,A plugin for pixel classification using XGBoost,Robert Haase," Copyright (c) 2024, Robert Haase, ScaDS.AI, Uni Leipzig All rights reserved. @@ -40905,8 +42781,8 @@ SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. -","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', 'xgboost', 'apoc', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.9,"['Bug Tracker, https://github.com/haesleinhuepf/napari-xgboost/issues', 'Documentation, https://github.com/haesleinhuepf/napari-xgboost#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-xgboost', 'User Support, https://github.com/haesleinhuepf/napari-xgboost/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['Segmentation'],,,,,,,,,,napari-xgboost.make_function_widget,Train Pixel Classifier (XGBoost),True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -396,napari-yapic-prediction,0.2.0,napari-yapic-prediction,napari widget that performs image segmentation with yapic model in the napari window. Install TENSORFLOW to use this plugin.,"Duway Nicolas Lesmes Leon, Pranjal Dhole",GNU GPL v3.0,https://github.com/yapic/napari-yapic-prediction,6206443939552dcb59f330cb,['conda'],,https://github.com/yapic/napari-yapic-prediction,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-yapic-prediction,http://api.anaconda.org/packages/conda-forge/napari-yapic-prediction,http://anaconda.org/conda-forge/napari-yapic-prediction,"['0.1.dev109', '0.2.0']",0.2.0,0.2.0,['noarch'],4.0,,['pyhd8ed1ab_0'],0.1.dev109,conda-forge/napari-yapic-prediction/0.1.dev109,1.0,0.0,2022-02-11 11:10:46.382000+00:00,2023-06-18 08:40:49.880000+00:00,conda,noarch/napari-yapic-prediction-0.1.dev109-pyhd8ed1ab_0.tar.bz2,0.0,GPL-3.0-only,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.6', 'scikit-image', 'yapic']",noarch,1644577596815.0,None-any-None,pyhd8ed1ab_0,2022-02-11 11:10:47.288000+00:00,222518bc08a0425464a8e580374ab42d,None,25697.0,conda-forge/napari-yapic-prediction/0.1.dev109/noarch/napari-yapic-prediction-0.1.dev109-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-yapic-prediction/0.1.dev109/noarch/napari-yapic-prediction-0.1.dev109-pyhd8ed1ab_0.tar.bz2,conda,0.1.dev109,conda-forge,['main'],public,,0.2.1,napari-yapic-prediction.MyWidget,MyWidget,napari_yapic_prediction._dock_widget:MyWidget,,,,2.1,napari-yapic-prediction,0.2.0,['UNKNOWN'],napari widget that performs image segmentation with yapic model in the napari window. Install TENSORFLOW to use this plugin.,"# napari-yapic-prediction +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', 'xgboost', 'apoc', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.9,"['Bug Tracker, https://github.com/haesleinhuepf/napari-xgboost/issues', 'Documentation, https://github.com/haesleinhuepf/napari-xgboost#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-xgboost', 'User Support, https://github.com/haesleinhuepf/napari-xgboost/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['Segmentation'],,,,,,,,,,napari-xgboost.make_function_widget,Train Pixel Classifier (XGBoost),True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +414,napari-yapic-prediction,0.2.0,napari-yapic-prediction,napari widget that performs image segmentation with yapic model in the napari window. Install TENSORFLOW to use this plugin.,"Duway Nicolas Lesmes Leon, Pranjal Dhole",GNU GPL v3.0,https://github.com/yapic/napari-yapic-prediction,6206443939552dcb59f330cb,['conda'],,https://github.com/yapic/napari-yapic-prediction,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-yapic-prediction,http://api.anaconda.org/packages/conda-forge/napari-yapic-prediction,http://anaconda.org/conda-forge/napari-yapic-prediction,"['0.1.dev109', '0.2.0']",0.2.0,0.2.0,['noarch'],4.0,,['pyhd8ed1ab_0'],0.1.dev109,conda-forge/napari-yapic-prediction/0.1.dev109,1.0,0.0,2022-02-11 11:10:46.382000+00:00,2023-06-18 08:40:49.880000+00:00,conda,noarch/napari-yapic-prediction-0.1.dev109-pyhd8ed1ab_0.tar.bz2,0.0,GPL-3.0-only,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.6', 'scikit-image', 'yapic']",noarch,1644577596815.0,None-any-None,pyhd8ed1ab_0,2022-02-11 11:10:47.288000+00:00,222518bc08a0425464a8e580374ab42d,None,25697.0,conda-forge/napari-yapic-prediction/0.1.dev109/noarch/napari-yapic-prediction-0.1.dev109-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-yapic-prediction/0.1.dev109/noarch/napari-yapic-prediction-0.1.dev109-pyhd8ed1ab_0.tar.bz2,conda,0.1.dev109,conda-forge,['main'],public,,0.2.1,napari-yapic-prediction.MyWidget,MyWidget,napari_yapic_prediction._dock_widget:MyWidget,,,,2.1,napari-yapic-prediction,0.2.0,['UNKNOWN'],napari widget that performs image segmentation with yapic model in the napari window. Install TENSORFLOW to use this plugin.,"# napari-yapic-prediction [![License](https://img.shields.io/pypi/l/napari-yapic-prediction.svg?color=green)](https://github.com/yapic/napari-yapic-prediction/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-yapic-prediction.svg?color=green)](https://pypi.org/project/napari-yapic-prediction) @@ -40973,8 +42849,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [YAPiC]: https://yapic.github.io/yapic/ -",text/markdown,https://github.com/yapic/napari-yapic-prediction,"Duway Nicolas Lesmes Leon, Pranjal Dhole","dlesmesleon@hotmail.com, dhole.pranjal@gmail.com",GNU GPL v3.0,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari[all]', 'yapic', 'scikit-image']",>=3.6,,,True,0.2.0,conda-forge/napari-yapic-prediction/0.2.0,,,,,conda,noarch/napari-yapic-prediction-0.2.0-pyhd8ed1ab_0.tar.bz2,0.0,GPL-3.0-only,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.6', 'scikit-image', 'yapic']",pyhd8ed1ab_0,1644639960935.0,None-any-None,noarch,2022-02-12 04:29:11.787000+00:00,b0481131e1f0218e89abf75a7effd635,None,25712.0,conda-forge/napari-yapic-prediction/0.2.0/noarch/napari-yapic-prediction-0.2.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-yapic-prediction/0.2.0/noarch/napari-yapic-prediction-0.2.0-pyhd8ed1ab_0.tar.bz2,conda,0.2.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-yapic-prediction.MyWidget,MyWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -397,napari-yolo5-mitosis-detector,0.0.1,Yolo5 Mitosis Detector,A simple plugin to use yolo5 for mitosis detection with napari,Titouan Poquillon,BSD-3-Clause,https://github.com/TPoquillon/napari-yolo5-mitosis-detector,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-yolo5-mitosis-detector.make_yolov5_qwidget,Make example QWidget,napari_yolo5_mitosis_detector:MitosisYolov5Widget,,,,2.1,napari-yolo5-mitosis-detector,0.0.1,,A simple plugin to use yolo5 for mitosis detection with napari,"# napari-yolo5-mitosis-detector +",text/markdown,https://github.com/yapic/napari-yapic-prediction,"Duway Nicolas Lesmes Leon, Pranjal Dhole","dlesmesleon@hotmail.com, dhole.pranjal@gmail.com",GNU GPL v3.0,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari[all]', 'yapic', 'scikit-image']",>=3.6,,,True,0.2.0,conda-forge/napari-yapic-prediction/0.2.0,,,,,conda,noarch/napari-yapic-prediction-0.2.0-pyhd8ed1ab_0.tar.bz2,0.0,GPL-3.0-only,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.6', 'scikit-image', 'yapic']",pyhd8ed1ab_0,1644639960935.0,None-any-None,noarch,2022-02-12 04:29:11.787000+00:00,b0481131e1f0218e89abf75a7effd635,None,25712.0,conda-forge/napari-yapic-prediction/0.2.0/noarch/napari-yapic-prediction-0.2.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-yapic-prediction/0.2.0/noarch/napari-yapic-prediction-0.2.0-pyhd8ed1ab_0.tar.bz2,conda,0.2.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-yapic-prediction.MyWidget,MyWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +415,napari-yolo5-mitosis-detector,0.0.1,Yolo5 Mitosis Detector,A simple plugin to use yolo5 for mitosis detection with napari,Titouan Poquillon,BSD-3-Clause,https://github.com/TPoquillon/napari-yolo5-mitosis-detector,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-yolo5-mitosis-detector.make_yolov5_qwidget,Make example QWidget,napari_yolo5_mitosis_detector:MitosisYolov5Widget,,,,2.1,napari-yolo5-mitosis-detector,0.0.1,,A simple plugin to use yolo5 for mitosis detection with napari,"# napari-yolo5-mitosis-detector [![License BSD-3](https://img.shields.io/pypi/l/napari-yolo5-mitosis-detector.svg?color=green)](https://github.com/TPoquillon/napari-yolo5-mitosis-detector/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-yolo5-mitosis-detector.svg?color=green)](https://pypi.org/project/napari-yolo5-mitosis-detector) @@ -41043,8 +42919,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/TPoquillon/napari-yolo5-mitosis-detector,Titouan Poquillon,titouan.poquillon@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy ==1.26.2', 'magicgui ==0.8.0', 'qtpy ==2.4.1', 'scikit-image ==0.20.0', 'opencv-python ==4.8.1.78', 'torch ==2.1.1', 'ultralytics ==8.0.222', 'shapely ==2.0.2', 'importlib-resources ==6.1.1', 'pandas ==2.1.3', 'napari-aicsimageio ==0.7.2', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.9,"['Bug Tracker, https://github.com/TPoquillon/napari-yolo5-mitosis-detector/issues', 'Documentation, https://github.com/TPoquillon/napari-yolo5-mitosis-detector#README.md', 'Source Code, https://github.com/TPoquillon/napari-yolo5-mitosis-detector', 'User Support, https://github.com/TPoquillon/napari-yolo5-mitosis-detector/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['Annotation'],,,,,,,,,,napari-yolo5-mitosis-detector.make_yolov5_qwidget,NY5MD,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -398,napari-yolov5,0.2.14,napari-yolov5,Plugin adapted from Ultralytics to bring YOLOv5 into Napari,Richard De Mets,GPL-3.0-only,https://github.com/rdemets/napari-yolov5,6282332a13ef1fb79e59e7b6,['conda'],,https://github.com/rdemets/napari-yolov5,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-yolov5,http://api.anaconda.org/packages/conda-forge/napari-yolov5,http://anaconda.org/conda-forge/napari-yolov5,"['0.2.12', '0.2.13']",0.2.13,0.2.13,['noarch'],4.0,,['pyhd8ed1ab_0'],0.2.12,conda-forge/napari-yolov5/0.2.12,1.0,0.0,2022-05-16 11:18:58.497000+00:00,2023-06-18 08:41:27.369000+00:00,conda,noarch/napari-yolov5-0.2.12-pyhd8ed1ab_0.tar.bz2,0.0,GPL-3.0-only,False,python,"['connected-components-3d >=3.6.0', 'magicgui <0.4.0', 'matplotlib-base >=3.2.2', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy >=1.18.5', 'opencv >=4.1.2', 'pillow >=7.1.2', 'python >=3.7', 'pytorch >=1.9.0', 'pyyaml >=5.3.1', 'requests >=2.23.0', 'scipy >=1.4.1', 'seaborn >=0.11.2', 'tensorboard >=1.15.0', 'torchvision >=0.8.1', 'tqdm >=4.41.0']",noarch,1652699631742.0,None-any-None,pyhd8ed1ab_0,2022-05-16 11:18:59.253000+00:00,265bf7f0583b2fcf0e8dff2260dabc3a,None,91818173.0,conda-forge/napari-yolov5/0.2.12/noarch/napari-yolov5-0.2.12-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-yolov5/0.2.12/noarch/napari-yolov5-0.2.12-pyhd8ed1ab_0.tar.bz2,conda,0.2.12,conda-forge,['main'],public,,0.2.1,napari-yolov5.widget_wrapper,widget_wrapper,napari_yolov5._dock_widget:widget_wrapper,,,,2.1,napari-yolov5,0.2.14,,Plugin adapted from Ultralytics to bring YOLOv5 into Napari,"# napari-yolov5 +",text/markdown,https://github.com/TPoquillon/napari-yolo5-mitosis-detector,Titouan Poquillon,titouan.poquillon@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy ==1.26.2', 'magicgui ==0.8.0', 'qtpy ==2.4.1', 'scikit-image ==0.20.0', 'opencv-python ==4.8.1.78', 'torch ==2.1.1', 'ultralytics ==8.0.222', 'shapely ==2.0.2', 'importlib-resources ==6.1.1', 'pandas ==2.1.3', 'napari-aicsimageio ==0.7.2', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.9,"['Bug Tracker, https://github.com/TPoquillon/napari-yolo5-mitosis-detector/issues', 'Documentation, https://github.com/TPoquillon/napari-yolo5-mitosis-detector#README.md', 'Source Code, https://github.com/TPoquillon/napari-yolo5-mitosis-detector', 'User Support, https://github.com/TPoquillon/napari-yolo5-mitosis-detector/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['Annotation'],,,,,,,,,,napari-yolo5-mitosis-detector.make_yolov5_qwidget,NY5MD,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +416,napari-yolov5,0.2.14,napari-yolov5,Plugin adapted from Ultralytics to bring YOLOv5 into Napari,Richard De Mets,GPL-3.0-only,https://github.com/rdemets/napari-yolov5,6282332a13ef1fb79e59e7b6,['conda'],,https://github.com/rdemets/napari-yolov5,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-yolov5,http://api.anaconda.org/packages/conda-forge/napari-yolov5,http://anaconda.org/conda-forge/napari-yolov5,"['0.2.12', '0.2.13']",0.2.13,0.2.13,['noarch'],4.0,,['pyhd8ed1ab_0'],0.2.12,conda-forge/napari-yolov5/0.2.12,1.0,0.0,2022-05-16 11:18:58.497000+00:00,2023-06-18 08:41:27.369000+00:00,conda,noarch/napari-yolov5-0.2.12-pyhd8ed1ab_0.tar.bz2,0.0,GPL-3.0-only,False,python,"['connected-components-3d >=3.6.0', 'magicgui <0.4.0', 'matplotlib-base >=3.2.2', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy >=1.18.5', 'opencv >=4.1.2', 'pillow >=7.1.2', 'python >=3.7', 'pytorch >=1.9.0', 'pyyaml >=5.3.1', 'requests >=2.23.0', 'scipy >=1.4.1', 'seaborn >=0.11.2', 'tensorboard >=1.15.0', 'torchvision >=0.8.1', 'tqdm >=4.41.0']",noarch,1652699631742.0,None-any-None,pyhd8ed1ab_0,2022-05-16 11:18:59.253000+00:00,265bf7f0583b2fcf0e8dff2260dabc3a,None,91818173.0,conda-forge/napari-yolov5/0.2.12/noarch/napari-yolov5-0.2.12-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-yolov5/0.2.12/noarch/napari-yolov5-0.2.12-pyhd8ed1ab_0.tar.bz2,conda,0.2.12,conda-forge,['main'],public,,0.2.1,napari-yolov5.widget_wrapper,widget_wrapper,napari_yolov5._dock_widget:widget_wrapper,,,,2.1,napari-yolov5,0.2.14,,Plugin adapted from Ultralytics to bring YOLOv5 into Napari,"# napari-yolov5 [![License](https://img.shields.io/pypi/l/napari-yolov5.svg?color=green)](https://github.com/rdemets/napari-yolov5/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-yolov5.svg?color=green)](https://pypi.org/project/napari-yolov5) @@ -41168,8 +43044,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/rdemets/napari-yolov5,Richard De Mets,demets.richard@gmail.com,GPL-3.0-only,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']","['connected-components-3d >=3.6.0', 'flask >=2.2.2', 'imageio-ffmpeg >=0.4.7', 'matplotlib >=3.2.2', 'napari-plugin-engine >=0.1.4', 'napari >=0.4.15', 'numpy >=1.18.5', 'opencv-python >=4.1.2', 'Pillow >=7.1.2', 'PyYAML >=5.3.1', 'qtpy >=2.2.1', 'requests >=2.23.0', 'scikit-image >=0.19.3', 'scipy >=1.4.1', 'tensorboard >=1.15.0', 'tensorflow >=2.10.0', 'torch >=1.9.0', 'torchvision >=0.8.1', 'tqdm >=4.41.0', 'seaborn >=0.11.2', 'wandb >=0.13.4']",>=3.7,,,True,0.2.13,conda-forge/napari-yolov5/0.2.13,,,,,conda,noarch/napari-yolov5-0.2.13-pyhd8ed1ab_0.tar.bz2,0.0,GPL-3.0-only,False,python,"['connected-components-3d >=3.6.0', 'flask', 'imageio-ffmpeg', 'magicgui <0.4.0', 'matplotlib-base >=3.2.2', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy >=1.18.5', 'opencv >=4.1.2', 'pillow >=7.1.2', 'python >=3.7', 'pytorch >=1.9.0', 'pyyaml >=5.3.1', 'qtpy', 'requests >=2.23.0', 'scikit-image', 'scipy >=1.4.1', 'seaborn >=0.11.2', 'tensorboard >=1.15.0', 'tensorflow', 'torchvision >=0.8.1', 'tqdm >=4.41.0', 'wandb']",pyhd8ed1ab_0,1666577322213.0,None-any-None,noarch,2022-10-24 02:14:41.660000+00:00,8121dc66425380b12f4a50c66c464529,None,91814864.0,conda-forge/napari-yolov5/0.2.13/noarch/napari-yolov5-0.2.13-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-yolov5/0.2.13/noarch/napari-yolov5-0.2.13-pyhd8ed1ab_0.tar.bz2,conda,0.2.13,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-yolov5.widget_wrapper,widget_wrapper,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -399,napari-zelda,0.1.12,napari-zelda,ZELDA: a 3D Image Segmentation and Parent-Child relation plugin for microscopy image analysis in napari,"Rocco D'Antuono, Giuseppina Pisignano",BSD-3-Clause,https://github.com/RoccoDAnt/napari-zelda,6205204cbfc43bf507b6137f,['conda'],,https://github.com/RoccoDAnt/napari-zelda,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-zelda,http://api.anaconda.org/packages/conda-forge/napari-zelda,http://anaconda.org/conda-forge/napari-zelda,"['0.1.10', '0.1.11', '0.1.12']",0.1.12,0.1.12,['noarch'],7.0,https://github.com/RoccoDAnt/napari-zelda,['pyhd8ed1ab_0'],0.1.10,conda-forge/napari-zelda/0.1.10,1.0,0.0,2022-02-10 14:25:13.932000+00:00,2023-11-10 16:21:36.853000+00:00,conda,noarch/napari-zelda-0.1.10-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['datatable', 'json5', 'magicgui', 'matplotlib-base >=3.4.3', 'napari !=0.4.11', 'napari-plugin-engine >=0.1.4', 'numpy', 'pandas', 'python >=3.7', 'scikit-image <=0.18.3', 'scipy']",noarch,1644502933597.0,None-any-None,pyhd8ed1ab_0,2022-02-10 14:25:14.697000+00:00,de1cef0da831f9c9710d96afe45da7bd,None,18787.0,conda-forge/napari-zelda/0.1.10/noarch/napari-zelda-0.1.10-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-zelda/0.1.10/noarch/napari-zelda-0.1.10-pyhd8ed1ab_0.tar.bz2,conda,0.1.10,conda-forge,['main'],public,,0.2.1,napari-zelda.launch_ZELDA,launch_ZELDA,napari_zelda.napari_zelda:launch_ZELDA,,,,2.1,napari-zelda,0.1.12,,ZELDA: a 3D Image Segmentation and Parent-Child relation plugin for microscopy image analysis in napari,"# napari-zelda +",text/markdown,https://github.com/rdemets/napari-yolov5,Richard De Mets,demets.richard@gmail.com,GPL-3.0-only,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']","['connected-components-3d>=3.6.0', 'flask>=2.2.2', 'imageio-ffmpeg>=0.4.7', 'matplotlib>=3.2.2', 'napari-plugin-engine>=0.1.4', 'napari>=0.4.15', 'numpy>=1.18.5', 'opencv-python>=4.1.2', 'Pillow>=7.1.2', 'PyYAML>=5.3.1', 'qtpy>=2.2.1', 'requests>=2.23.0', 'scikit-image>=0.19.3', 'scipy>=1.4.1', 'tensorboard>=1.15.0', 'tensorflow>=2.10.0', 'torch>=1.9.0', 'torchvision>=0.8.1', 'tqdm>=4.41.0', 'seaborn>=0.11.2', 'wandb>=0.13.4']",>=3.7,,,True,0.2.13,conda-forge/napari-yolov5/0.2.13,,,,,conda,noarch/napari-yolov5-0.2.13-pyhd8ed1ab_0.tar.bz2,0.0,GPL-3.0-only,False,python,"['connected-components-3d >=3.6.0', 'flask', 'imageio-ffmpeg', 'magicgui <0.4.0', 'matplotlib-base >=3.2.2', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy >=1.18.5', 'opencv >=4.1.2', 'pillow >=7.1.2', 'python >=3.7', 'pytorch >=1.9.0', 'pyyaml >=5.3.1', 'qtpy', 'requests >=2.23.0', 'scikit-image', 'scipy >=1.4.1', 'seaborn >=0.11.2', 'tensorboard >=1.15.0', 'tensorflow', 'torchvision >=0.8.1', 'tqdm >=4.41.0', 'wandb']",pyhd8ed1ab_0,1666577322213.0,None-any-None,noarch,2022-10-24 02:14:41.660000+00:00,8121dc66425380b12f4a50c66c464529,None,91814864.0,conda-forge/napari-yolov5/0.2.13/noarch/napari-yolov5-0.2.13-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-yolov5/0.2.13/noarch/napari-yolov5-0.2.13-pyhd8ed1ab_0.tar.bz2,conda,0.2.13,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-yolov5.widget_wrapper,widget_wrapper,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +417,napari-zelda,0.1.12,napari-zelda,ZELDA: a 3D Image Segmentation and Parent-Child relation plugin for microscopy image analysis in napari,"Rocco D'Antuono, Giuseppina Pisignano",BSD-3-Clause,https://github.com/RoccoDAnt/napari-zelda,6205204cbfc43bf507b6137f,['conda'],,https://github.com/RoccoDAnt/napari-zelda,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-zelda,http://api.anaconda.org/packages/conda-forge/napari-zelda,http://anaconda.org/conda-forge/napari-zelda,"['0.1.10', '0.1.11', '0.1.12']",0.1.12,0.1.12,['noarch'],7.0,https://github.com/RoccoDAnt/napari-zelda,['pyhd8ed1ab_0'],0.1.10,conda-forge/napari-zelda/0.1.10,1.0,0.0,2022-02-10 14:25:13.932000+00:00,2023-11-10 16:21:36.853000+00:00,conda,noarch/napari-zelda-0.1.10-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['datatable', 'json5', 'magicgui', 'matplotlib-base >=3.4.3', 'napari !=0.4.11', 'napari-plugin-engine >=0.1.4', 'numpy', 'pandas', 'python >=3.7', 'scikit-image <=0.18.3', 'scipy']",noarch,1644502933597.0,None-any-None,pyhd8ed1ab_0,2022-02-10 14:25:14.697000+00:00,de1cef0da831f9c9710d96afe45da7bd,None,18787.0,conda-forge/napari-zelda/0.1.10/noarch/napari-zelda-0.1.10-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-zelda/0.1.10/noarch/napari-zelda-0.1.10-pyhd8ed1ab_0.tar.bz2,conda,0.1.10,conda-forge,['main'],public,,0.2.1,napari-zelda.launch_ZELDA,launch_ZELDA,napari_zelda.napari_zelda:launch_ZELDA,,,,2.1,napari-zelda,0.1.12,,ZELDA: a 3D Image Segmentation and Parent-Child relation plugin for microscopy image analysis in napari,"# napari-zelda [![License](https://img.shields.io/pypi/l/napari-zelda.svg?color=green)](https://github.com/RoccoDAnt/napari-zelda/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-zelda.svg?color=green)](https://pypi.org/project/napari-zelda) @@ -41324,8 +43200,132 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/RoccoDAnt/napari-zelda,"Rocco D'Antuono, Giuseppina Pisignano",rocco.dantuono@hotmail.it,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['datatable', 'json5', 'magicgui', 'matplotlib >=3.4.3', 'napari !=0.4.11', 'napari-plugin-engine >=0.1.4', 'numpy', 'pandas', 'scikit-image', 'scipy']",>=3.7,,,True,0.1.11,conda-forge/napari-zelda/0.1.11,0.1.12,conda-forge/napari-zelda/0.1.12,,,conda,noarch/napari-zelda-0.1.11-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['datatable', 'json5', 'magicgui', 'matplotlib-base >=3.4.3', 'napari !=0.4.11', 'napari-plugin-engine >=0.1.4', 'numpy', 'pandas', 'python >=3.7', 'qtpy', 'scikit-image', 'scipy']",pyhd8ed1ab_0,1699412445243.0,None-any-None,noarch,2023-11-08 03:02:22.597000+00:00,676a6e916587ed1f791ea84325a8ffe8,6e2d6450e3e72c0a6cbb0c93d4b8c655b57d21483099d715222f6474f547a329,20506.0,conda-forge/napari-zelda/0.1.11/noarch/napari-zelda-0.1.11-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-zelda/0.1.11/noarch/napari-zelda-0.1.11-pyhd8ed1ab_0.conda,conda,0.1.11,conda-forge,['main'],conda,noarch/napari-zelda-0.1.12-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['datatable', 'json5', 'magicgui', 'matplotlib-base >=3.4.3', 'napari !=0.4.11', 'napari-plugin-engine >=0.1.4', 'numpy', 'pandas', 'python >=3.7', 'qtpy', 'scikit-image', 'scipy']",noarch,1699633180363.0,None-any-None,pyhd8ed1ab_0,2023-11-10 16:21:35.312000+00:00,6744818fd241260bb114b92bc3b7a717,253fbc08a0df833cbf53fea2592289ec631cf785cd2af40d581ac18fcee3f11b,21123.0,conda-forge/napari-zelda/0.1.12/noarch/napari-zelda-0.1.12-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-zelda/0.1.12/noarch/napari-zelda-0.1.12-pyhd8ed1ab_0.conda,conda,0.1.12,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-zelda.launch_ZELDA,launch_ZELDA,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -400,napari-zulip,0.0.2,napari-zulip,A simple plugin for interacting with Zulip from napari,Kyle Harrington,BSD-3-Clause,https://github.com/kephale/napari-zulip,6455565df6754c427acaac77,['conda'],,https://github.com/kephale/napari-zulip,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-zulip,http://api.anaconda.org/packages/conda-forge/napari-zulip,http://anaconda.org/conda-forge/napari-zulip,['0.0.2'],0.0.2,0.0.2,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.2,conda-forge/napari-zulip/0.0.2,1.0,0.0,2023-05-05 19:17:46.634000+00:00,2023-06-18 17:28:11.856000+00:00,conda,noarch/napari-zulip-0.0.2-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'numpy', 'python >=3.9', 'qtpy', 'zulip']",noarch,1683314211536.0,None-any-None,pyhd8ed1ab_0,2023-05-05 19:17:47.015000+00:00,ee167bb30c149007ed8b130ae2f50f22,8b3948aa3313f44516d6a622b221ac008b798a985c451b185dab2cccefb21ad2,11465.0,conda-forge/napari-zulip/0.0.2/noarch/napari-zulip-0.0.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-zulip/0.0.2/noarch/napari-zulip-0.0.2-pyhd8ed1ab_0.conda,conda,0.0.2,conda-forge,['main'],public,,0.2.1,napari-zulip.screenshot_to_Zulip,Send the current screenshot to Zulip,napari_zulip._widget:screenshot_to_zulip,,,,2.1,napari-zulip,0.0.2,,A simple plugin for interacting with Zulip from napari,"# napari-zulip +",text/markdown,https://github.com/RoccoDAnt/napari-zelda,"Rocco D'Antuono, Giuseppina Pisignano",rocco.dantuono@hotmail.it,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['datatable', 'json5', 'magicgui', 'matplotlib>=3.4.3', 'napari!=0.4.11', 'napari-plugin-engine>=0.1.4', 'numpy', 'pandas', 'scikit-image', 'scipy']",>=3.7,,,True,0.1.11,conda-forge/napari-zelda/0.1.11,0.1.12,conda-forge/napari-zelda/0.1.12,,,conda,noarch/napari-zelda-0.1.11-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['datatable', 'json5', 'magicgui', 'matplotlib-base >=3.4.3', 'napari !=0.4.11', 'napari-plugin-engine >=0.1.4', 'numpy', 'pandas', 'python >=3.7', 'qtpy', 'scikit-image', 'scipy']",pyhd8ed1ab_0,1699412445243.0,None-any-None,noarch,2023-11-08 03:02:22.597000+00:00,676a6e916587ed1f791ea84325a8ffe8,6e2d6450e3e72c0a6cbb0c93d4b8c655b57d21483099d715222f6474f547a329,20506.0,conda-forge/napari-zelda/0.1.11/noarch/napari-zelda-0.1.11-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-zelda/0.1.11/noarch/napari-zelda-0.1.11-pyhd8ed1ab_0.conda,conda,0.1.11,conda-forge,['main'],conda,noarch/napari-zelda-0.1.12-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['datatable', 'json5', 'magicgui', 'matplotlib-base >=3.4.3', 'napari !=0.4.11', 'napari-plugin-engine >=0.1.4', 'numpy', 'pandas', 'python >=3.7', 'qtpy', 'scikit-image', 'scipy']",noarch,1699633180363.0,None-any-None,pyhd8ed1ab_0,2023-11-10 16:21:35.312000+00:00,6744818fd241260bb114b92bc3b7a717,253fbc08a0df833cbf53fea2592289ec631cf785cd2af40d581ac18fcee3f11b,21123.0,conda-forge/napari-zelda/0.1.12/noarch/napari-zelda-0.1.12-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-zelda/0.1.12/noarch/napari-zelda-0.1.12-pyhd8ed1ab_0.conda,conda,0.1.12,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-zelda.launch_ZELDA,launch_ZELDA,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +418,napari-zplane-depth-colorizer,0.0.1,napari-zplane-depth-colorizer,A simple plugin to color and merge z-planes of 3D data to give depth information.,Mai Hoang," +Copyright (c) 2024, Mai Hoang +All rights reserved. + +Redistribution and use in source and binary forms, with or without +modification, are permitted provided that the following conditions are met: + +* Redistributions of source code must retain the above copyright notice, this + list of conditions and the following disclaimer. + +* Redistributions in binary form must reproduce the above copyright notice, + this list of conditions and the following disclaimer in the documentation + and/or other materials provided with the distribution. + +* Neither the name of copyright holder nor the names of its + contributors may be used to endorse or promote products derived from + this software without specific prior written permission. + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ""AS IS"" +AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE +IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE +DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE +FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL +DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR +SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER +CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, +OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE +OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. +",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,napari-zplane-depth-colorizer.make_qwidget,Interactive Widget,napari_zplane_depth_colorizer:ColorQWidget,,,,2.1,napari-zplane-depth-colorizer,0.0.1,,A simple plugin to color and merge z-planes of 3D data to give depth information.,"# napari-zplane-depth-colorizer + +[![License BSD-3](https://img.shields.io/pypi/l/napari-zplane-depth-colorizer.svg?color=green)](https://github.com/maihanhoang/napari-zplane-depth-colorizer/raw/main/LICENSE) +[![PyPI](https://img.shields.io/pypi/v/napari-zplane-depth-colorizer.svg?color=green)](https://pypi.org/project/napari-zplane-depth-colorizer) +[![Python Version](https://img.shields.io/pypi/pyversions/napari-zplane-depth-colorizer.svg?color=green)](https://python.org) +[![tests](https://github.com/maihanhoang/napari-zplane-depth-colorizer/workflows/tests/badge.svg)](https://github.com/maihanhoang/napari-zplane-depth-colorizer/actions) +[![codecov](https://codecov.io/gh/maihanhoang/napari-zplane-depth-colorizer/branch/main/graph/badge.svg)](https://codecov.io/gh/maihanhoang/napari-zplane-depth-colorizer) +[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-zplane-depth-colorizer)](https://napari-hub.org/plugins/napari-zplane-depth-colorizer) + +A simple plugin for 3d+t files that visualizes z-planes in 3 colors for depth information. + +---------------------------------- + +This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template. + + + +## Installation + +You can install `napari-zplane-depth-colorizer` via [pip]: + + pip install napari-zplane-depth-colorizer + + + +To install latest development version : + + pip install git+https://github.com/maihanhoang/napari-zplane-depth-colorizer.git + + +## Contributing + +Contributions are very welcome. Tests can be run with [tox], please ensure +the coverage at least stays the same before you submit a pull request. + +## License + +Distributed under the terms of the [BSD-3] license, +""napari-zplane-depth-colorizer"" is free and open source software + +## Issues + +If you encounter any problems, please [file an issue] along with a detailed description. + +[napari]: https://github.com/napari/napari +[Cookiecutter]: https://github.com/audreyr/cookiecutter +[@napari]: https://github.com/napari +[MIT]: http://opensource.org/licenses/MIT +[BSD-3]: http://opensource.org/licenses/BSD-3-Clause +[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt +[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt +[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0 +[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt +[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin + +[file an issue]: https://github.com/maihanhoang/napari-zplane-depth-colorizer/issues + +[napari]: https://github.com/napari/napari +[tox]: https://tox.readthedocs.io/en/latest/ +[pip]: https://pypi.org/project/pip/ +[PyPI]: https://pypi.org/ +",text/markdown,,Mai Hoang,maihan.hoang1208@gmail.com," +Copyright (c) 2024, Mai Hoang +All rights reserved. + +Redistribution and use in source and binary forms, with or without +modification, are permitted provided that the following conditions are met: + +* Redistributions of source code must retain the above copyright notice, this + list of conditions and the following disclaimer. + +* Redistributions in binary form must reproduce the above copyright notice, + this list of conditions and the following disclaimer in the documentation + and/or other materials provided with the distribution. + +* Neither the name of copyright holder nor the names of its + contributors may be used to endorse or promote products derived from + this software without specific prior written permission. + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ""AS IS"" +AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE +IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE +DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE +FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL +DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR +SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER +CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, +OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE +OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.9,"['Bug Tracker, https://github.com/maihanhoang/napari-zplane-depth-colorizer/issues', 'Documentation, https://github.com/maihanhoang/napari-zplane-depth-colorizer#README.md', 'Source Code, https://github.com/maihanhoang/napari-zplane-depth-colorizer', 'User Support, https://github.com/maihanhoang/napari-zplane-depth-colorizer/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Visualization']",,,,,,,,,,napari-zplane-depth-colorizer.make_qwidget,Z-Color,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +419,napari-zulip,0.0.2,napari-zulip,A simple plugin for interacting with Zulip from napari,Kyle Harrington,BSD-3-Clause,https://github.com/kephale/napari-zulip,6455565df6754c427acaac77,['conda'],,https://github.com/kephale/napari-zulip,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-zulip,http://api.anaconda.org/packages/conda-forge/napari-zulip,http://anaconda.org/conda-forge/napari-zulip,['0.0.2'],0.0.2,0.0.2,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.2,conda-forge/napari-zulip/0.0.2,1.0,0.0,2023-05-05 19:17:46.634000+00:00,2023-06-18 17:28:11.856000+00:00,conda,noarch/napari-zulip-0.0.2-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'numpy', 'python >=3.9', 'qtpy', 'zulip']",noarch,1683314211536.0,None-any-None,pyhd8ed1ab_0,2023-05-05 19:17:47.015000+00:00,ee167bb30c149007ed8b130ae2f50f22,8b3948aa3313f44516d6a622b221ac008b798a985c451b185dab2cccefb21ad2,11465.0,conda-forge/napari-zulip/0.0.2/noarch/napari-zulip-0.0.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-zulip/0.0.2/noarch/napari-zulip-0.0.2-pyhd8ed1ab_0.conda,conda,0.0.2,conda-forge,['main'],public,,0.2.1,napari-zulip.screenshot_to_Zulip,Send the current screenshot to Zulip,napari_zulip._widget:screenshot_to_zulip,,,,2.1,napari-zulip,0.0.2,,A simple plugin for interacting with Zulip from napari,"# napari-zulip [![License BSD-3](https://img.shields.io/pypi/l/napari-zulip.svg?color=green)](https://github.com/kephale/napari-zulip/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-zulip.svg?color=green)](https://pypi.org/project/napari-zulip) @@ -41406,12 +43406,14 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/kephale/napari-zulip,Kyle Harrington,czi@kyleharrington.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'zulip', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.9,"['Bug Tracker, https://github.com/kephale/napari-zulip/issues', 'Documentation, https://github.com/kephale/napari-zulip#README.md', 'Source Code, https://github.com/kephale/napari-zulip', 'User Support, https://github.com/kephale/napari-zulip/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-zulip.screenshot_to_Zulip,Send the current screenshot to Zulip,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -401,napari_cellseg3d,0.2.0,CellSeg3D,Plugin for cell segmentation in 3D,,MIT,,62cbfa2d9aac3c40e40b4aa5,['conda'],,https://github.com/AdaptiveMotorControlLab/CellSeg3d,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-cellseg3d,http://api.anaconda.org/packages/conda-forge/napari-cellseg3d,http://anaconda.org/conda-forge/napari-cellseg3d,"['0.0.1rc2', '0.0.1rc3', '0.0.1rc4', '0.0.2rc6', '0.1.0', '0.1.1', '0.2.0']",0.2.0,0.2.0,['noarch'],17.0,,['pyhd8ed1ab_0'],0.0.1rc2,conda-forge/napari-cellseg3d/0.0.1rc2,1.0,0.0,2022-07-11 10:23:39.438000+00:00,2024-06-04 13:40:45.355000+00:00,conda,noarch/napari-cellseg3d-0.0.1rc2-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['dask-image >=0.6.0', 'imageio-ffmpeg >=0.4.5', 'itk >=5.2.0', 'matplotlib-base >=3.4.1', 'monai >=0.8.1', 'napari >=0.4.14', 'nibabel', 'numpy', 'opencv >=4.5.5', 'pillow', 'python >=3.8', 'pytorch >=1.11', 'qtpy', 'scikit-image >=0.19.2', 'tifffile >=2022.2.9', 'vispy >=0.9.6']",noarch,1657534779453.0,None-any-None,pyhd8ed1ab_0,2022-07-11 10:23:39.699000+00:00,bdcb26b3f630a55fc58b80ca3e074c7b,None,70242.0,conda-forge/napari-cellseg3d/0.0.1rc2/noarch/napari-cellseg3d-0.0.1rc2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-cellseg3d/0.0.1rc2/noarch/napari-cellseg3d-0.0.1rc2-pyhd8ed1ab_0.tar.bz2,conda,0.0.1rc2,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,0.0.1rc3,conda-forge/napari-cellseg3d/0.0.1rc3,0.0.1rc4,conda-forge/napari-cellseg3d/0.0.1rc4,0.0.2rc6,conda-forge/napari-cellseg3d/0.0.2rc6,conda,noarch/napari-cellseg3d-0.0.1rc3-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['dask-image >=0.6.0', 'imageio-ffmpeg >=0.4.5', 'itk >=5.2.0', 'magicgui', 'matplotlib-base >=3.4.1', 'monai >=0.8.1', 'napari >=0.4.14', 'nibabel', 'numpy', 'opencv >=4.5.5', 'pillow', 'pims', 'python >=3.8', 'pytorch >=1.11', 'qtpy', 'scikit-image >=0.19.2', 'tifffile >=2022.2.9', 'tqdm', 'vispy >=0.9.6']",pyhd8ed1ab_0,1660335801441.0,None-any-None,noarch,2022-08-12 20:27:31.993000+00:00,cbc4d58d4d28d3baf16fc0904efb2843,None,72968.0,conda-forge/napari-cellseg3d/0.0.1rc3/noarch/napari-cellseg3d-0.0.1rc3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-cellseg3d/0.0.1rc3/noarch/napari-cellseg3d-0.0.1rc3-pyhd8ed1ab_0.tar.bz2,conda,0.0.1rc3,conda-forge,['main'],conda,noarch/napari-cellseg3d-0.0.1rc4-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['dask-image >=0.6.0', 'einops', 'imageio-ffmpeg >=0.4.5', 'itk >=5.2.0', 'magicgui', 'matplotlib-base >=3.4.1', 'monai >=0.9.0', 'napari >=0.4.14', 'nibabel', 'numpy', 'opencv >=4.5.5', 'pillow', 'pims', 'python >=3.8', 'pytorch >=1.11', 'qtpy', 'scikit-image >=0.19.2', 'tifffile >=2022.2.9', 'tqdm', 'vispy >=0.9.6']",noarch,1661419300176.0,None-any-None,pyhd8ed1ab_0,2022-08-25 09:25:40.341000+00:00,6269255b25fb7e19a389996af1982e22,None,73669.0,conda-forge/napari-cellseg3d/0.0.1rc4/noarch/napari-cellseg3d-0.0.1rc4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-cellseg3d/0.0.1rc4/noarch/napari-cellseg3d-0.0.1rc4-pyhd8ed1ab_0.tar.bz2,conda,0.0.1rc4,conda-forge,['main'],conda,noarch/napari-cellseg3d-0.0.2rc6-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['dask-image >=0.6.0', 'einops', 'imageio-ffmpeg >=0.4.5', 'itk >=5.2.0', 'magicgui', 'matplotlib-base >=3.4.1', 'monai >=0.9.0', 'napari >=0.4.14', 'nibabel', 'numpy', 'opencv >=4.5.5', 'pillow', 'pims', 'python >=3.8', 'pytorch >=1.11', 'qtpy', 'scikit-image >=0.19.2', 'tifffile >=2022.2.9', 'tqdm', 'vispy >=0.9.6']",MIT,python,1682326222541.0,2023-04-24 08:53:03.558000+00:00,61f70ee0a8eee91d1ccddec8dae14983,4272f1ae3089aa99f75cb28bc6cacb9f6f19906c2789d19a4b4fb4c20ee60fc7,582512.0,conda-forge/napari-cellseg3d/0.0.2rc6/noarch/napari-cellseg3d-0.0.2rc6-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-cellseg3d/0.0.2rc6/noarch/napari-cellseg3d-0.0.2rc6-pyhd8ed1ab_0.conda,conda,0.0.2rc6,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,0.1.0,conda-forge/napari-cellseg3d/0.1.0,0.1.1,conda-forge/napari-cellseg3d/0.1.1,0.2.0,conda-forge/napari-cellseg3d/0.2.0,conda,noarch/napari-cellseg3d-0.1.0-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['einops', 'itk >=5.2.0', 'magicgui', 'matplotlib-base >=3.4.1', 'monai >=0.9.0', 'napari >=0.4.14', 'numpy', 'pyclesperanto-prototype', 'python >=3.8', 'pytorch >=1.11', 'qtpy >=2.4', 'scikit-image >=0.19.2', 'tifffile >=2022.2.9', 'tqdm']",noarch,1702629447347.0,None-any-None,pyhd8ed1ab_0,2023-12-15 08:39:43.886000+00:00,5dd942c982361d1d343e4a6bfb0d4a43,750ac21b93bc078db0c54c0e200d1f2fc25dbb67a825a8f04dede9d9bbd86b63,623606.0,conda-forge/napari-cellseg3d/0.1.0/noarch/napari-cellseg3d-0.1.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-cellseg3d/0.1.0/noarch/napari-cellseg3d-0.1.0-pyhd8ed1ab_0.conda,conda,0.1.0,conda-forge,['main'],conda,noarch/napari-cellseg3d-0.1.1-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['einops', 'itk >=5.2.0', 'magicgui', 'matplotlib-base >=3.4.1', 'monai >=0.9.0', 'napari >=0.4.14', 'numpy', 'pyclesperanto-prototype', 'python >=3.8', 'pytorch >=1.11', 'qtpy >=2.4', 'scikit-image >=0.19.2', 'tifffile >=2022.2.9', 'tqdm']",noarch,1702632315941.0,None-any-None,pyhd8ed1ab_0,2023-12-15 09:27:58.701000+00:00,72e55a371b6e330268cefa0b16cbd1e9,5a805cf0e5fe2690de70e9a4387bf2812c036344050aaa7c10d31f094a9094fb,622686.0,conda-forge/napari-cellseg3d/0.1.1/noarch/napari-cellseg3d-0.1.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-cellseg3d/0.1.1/noarch/napari-cellseg3d-0.1.1-pyhd8ed1ab_0.conda,conda,0.1.1,conda-forge,['main'],conda,noarch/napari-cellseg3d-0.2.0-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['einops', 'itk >=5.2.0', 'magicgui', 'matplotlib-base >=3.4.1', 'monai >=0.9.0', 'napari >=0.4.14', 'numpy', 'pyclesperanto-prototype', 'python >=3.8', 'pytorch >=1.11', 'qtpy >=2.4', 'scikit-image >=0.19.2', 'tifffile >=2022.2.9', 'tqdm']",MIT,python,1717508254767.0,2024-06-04 13:40:43.622000+00:00,3e29bb9690483c4c69d9dc25c2943083,cc38001864e713d1f8bc7f959b9a1b11f945dfdbfa661bb1ce476718229a61c5,625626.0,conda-forge/napari-cellseg3d/0.2.0/noarch/napari-cellseg3d-0.2.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-cellseg3d/0.2.0/noarch/napari-cellseg3d-0.2.0-pyhd8ed1ab_0.conda,conda,0.2.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -402,napari_hello,0.1.0,napari_hello,My napari plugin,Your Name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -403,napari_psf_analysis,1.1.3,napari_psf_analysis,A plugin to analyse point spread functions (PSFs).,Tim-Oliver Buchholz,BSD-3-Clause,https://github.com/fmi-faim/napari-psf-analysis.git,62c6a21cdb466a21da48071d,['conda'],,https://github.com/fmi-faim/napari-psf-analysis,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-psf-analysis,http://api.anaconda.org/packages/conda-forge/napari-psf-analysis,http://anaconda.org/conda-forge/napari-psf-analysis,['0.1.2'],0.1.2,0.1.2,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.2,conda-forge/napari-psf-analysis/0.1.2,1.0,0.0,2022-07-07 09:06:34.469000+00:00,2023-06-18 08:42:02.495000+00:00,conda,noarch/napari-psf-analysis-0.1.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['matplotlib-base', 'napari', 'numpy', 'pandas', 'python >=3.7', 'scikit-image']",noarch,1657184651202.0,None-any-None,pyhd8ed1ab_0,2022-07-07 09:06:34.847000+00:00,ef1835fe0badafffbf0cea410845d11b,None,21637.0,conda-forge/napari-psf-analysis/0.1.2/noarch/napari-psf-analysis-0.1.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-psf-analysis/0.1.2/noarch/napari-psf-analysis-0.1.2-pyhd8ed1ab_0.tar.bz2,conda,0.1.2,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -404,napari_stress,0.3.8,napari_stress,Interactive surface analysis in napari for measuring mechanical stresses in biological tissues,"Johannes Soltwedel, Ben J. Gross, Elijah Shelton, Carlos Gomez, Otger Campas",BSD-3-Clause,,6573928f42fcd7a43b87c6e0,['conda'],,https://pypi.org/project/napari-stress,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-stress,http://api.anaconda.org/packages/conda-forge/napari-stress,http://anaconda.org/conda-forge/napari-stress,"['0.2.8', '0.3.0', '0.3.2']",0.3.2,0.3.2,['noarch'],9.0,https://github.com/campaslab/napari-stress,['pyh9208f05_0'],0.2.8,conda-forge/napari-stress/0.2.8,1.0,0.0,2023-12-08 22:02:52.335000+00:00,2024-01-15 14:36:46.457000+00:00,conda,noarch/napari-stress-0.2.8-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['dask-core', 'distributed', 'joblib', 'magicgui <=0.8.0', 'matplotlib-base', 'mpmath', 'napari', 'napari-matplotlib >=1.1.0', 'napari-process-points-and-surfaces >=0.4.0', 'napari-segment-blobs-and-things-with-membranes', 'napari-tools-menu >=0.1.15', 'numpy <1.24.0', 'pandas', 'pygeodesic', 'pyocclient', 'pyshtools <=4.10.0', 'python >=3.7', 'scikit-image', 'scipy', 'seaborn', 'tqdm', 'vedo >=2023.4.3', 'vispy']",noarch,1702072787230.0,None-any-None,pyh9208f05_0,2023-12-08 22:02:52.786000+00:00,96debdac9c27b8b42fe16a5bb70563e0,0b9a478d2ede0893d03cb420ffbd896e893681091c3425d824703835cf3d0131,955014.0,conda-forge/napari-stress/0.2.8/noarch/napari-stress-0.2.8-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-stress/0.2.8/noarch/napari-stress-0.2.8-pyh9208f05_0.conda,conda,0.2.8,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,0.3.0,conda-forge/napari-stress/0.3.0,0.3.2,conda-forge/napari-stress/0.3.2,,,conda,noarch/napari-stress-0.3.0-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['dask-core', 'distributed', 'joblib', 'magicgui <=0.8.0', 'matplotlib-base', 'mpmath', 'napari', 'napari-matplotlib >=1.1.0', 'napari-process-points-and-surfaces >=0.4.0', 'napari-segment-blobs-and-things-with-membranes', 'napari-tools-menu >=0.1.15', 'numpy <1.24.0', 'pandas', 'pygeodesic', 'pyocclient', 'pyshtools <=4.10.0', 'python >=3.7', 'scikit-image', 'scipy', 'seaborn', 'tqdm', 'vedo >=2023.5.0', 'vispy']",pyh9208f05_0,1702081383743.0,None-any-None,noarch,2023-12-09 00:26:26.268000+00:00,b74bfc6b55c7e67c4d7ea5f8ffee0b2f,74f6b74c74a3c8051a33171490c791be207f720307d048556ffbefad74ca00b2,939568.0,conda-forge/napari-stress/0.3.0/noarch/napari-stress-0.3.0-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-stress/0.3.0/noarch/napari-stress-0.3.0-pyh9208f05_0.conda,conda,0.3.0,conda-forge,['main'],conda,noarch/napari-stress-0.3.2-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['dask-core', 'distributed', 'joblib', 'magicgui <=0.8.0', 'matplotlib-base', 'mpmath', 'napari', 'napari-matplotlib >=1.1.0', 'napari-process-points-and-surfaces >=0.4.0', 'napari-segment-blobs-and-things-with-membranes', 'napari-tools-menu >=0.1.15', 'numpy <1.24.0', 'pandas', 'pygeodesic', 'pyocclient', 'pyshtools <=4.10.0', 'python >=3.7', 'scikit-image', 'scipy', 'seaborn', 'tqdm', 'vedo >=2023.5.0', 'vispy']",noarch,1705329231354.0,None-any-None,pyh9208f05_0,2024-01-15 14:36:44.545000+00:00,bf50c62c5dfe390eff5f3eea60751724,33dba51e1fa21d2a2c55ac33e965cdde55d099146a0bc49caee4ad29d94b7384,936888.0,conda-forge/napari-stress/0.3.2/noarch/napari-stress-0.3.2-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-stress/0.3.2/noarch/napari-stress-0.3.2-pyh9208f05_0.conda,conda,0.3.2,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -405,napari_video,0.2.9,napari_video,napari plugin for reading videos.,Jan Clemens,,https://github.com/janclemenslab/napari-video,61fe70e43e9442d67a3ca040,['conda'],,https://github.com/janclemenslab/napari-video,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari_video,http://api.anaconda.org/packages/conda-forge/napari_video,http://anaconda.org/conda-forge/napari_video,"['0.2.7', '0.2.8', '0.2.9']",0.2.9,0.2.9,['noarch'],5.0,,['pyhd8ed1ab_0'],0.2.7,conda-forge/napari_video/0.2.7,1.0,0.0,2022-02-05 12:43:13.874000+00:00,2023-06-18 08:40:47.480000+00:00,conda,noarch/napari_video-0.2.7-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['dask-core', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.6', 'pyvideoreader']",noarch,1644064893398.0,None-any-None,pyhd8ed1ab_0,2022-02-05 12:43:14.119000+00:00,fc063bef816b4af6431a8c9415753680,None,8145.0,conda-forge/napari_video/0.2.7/noarch/napari_video-0.2.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari_video/0.2.7/noarch/napari_video-0.2.7-pyhd8ed1ab_0.tar.bz2,conda,0.2.7,conda-forge,['main'],public,,0.2.1,napari_video.napari_get_reader,napari_get_reader,napari_video.napari_video:napari_get_reader,napari_video.napari_get_reader,['*'],True,2.1,napari_video,0.2.9,,napari plugin for reading videos.,"# napari-video +",text/markdown,https://github.com/kephale/napari-zulip,Kyle Harrington,czi@kyleharrington.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'zulip', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.9,"['Bug Tracker, https://github.com/kephale/napari-zulip/issues', 'Documentation, https://github.com/kephale/napari-zulip#README.md', 'Source Code, https://github.com/kephale/napari-zulip', 'User Support, https://github.com/kephale/napari-zulip/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,napari-zulip.screenshot_to_Zulip,Send the current screenshot to Zulip,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +420,napari_cellseg3d,0.2.1,CellSeg3D,Plugin for cell segmentation in 3D,,MIT,,62cbfa2d9aac3c40e40b4aa5,['conda'],,https://github.com/AdaptiveMotorControlLab/CellSeg3d,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-cellseg3d,http://api.anaconda.org/packages/conda-forge/napari-cellseg3d,http://anaconda.org/conda-forge/napari-cellseg3d,"['0.0.1rc2', '0.0.1rc3', '0.0.1rc4', '0.0.2rc6', '0.1.0', '0.1.1', '0.2.0']",0.2.0,0.2.0,['noarch'],17.0,,['pyhd8ed1ab_0'],0.0.1rc2,conda-forge/napari-cellseg3d/0.0.1rc2,1.0,0.0,2022-07-11 10:23:39.438000+00:00,2024-06-04 13:40:45.355000+00:00,conda,noarch/napari-cellseg3d-0.0.1rc2-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['dask-image >=0.6.0', 'imageio-ffmpeg >=0.4.5', 'itk >=5.2.0', 'matplotlib-base >=3.4.1', 'monai >=0.8.1', 'napari >=0.4.14', 'nibabel', 'numpy', 'opencv >=4.5.5', 'pillow', 'python >=3.8', 'pytorch >=1.11', 'qtpy', 'scikit-image >=0.19.2', 'tifffile >=2022.2.9', 'vispy >=0.9.6']",noarch,1657534779453.0,None-any-None,pyhd8ed1ab_0,2022-07-11 10:23:39.699000+00:00,bdcb26b3f630a55fc58b80ca3e074c7b,None,70242.0,conda-forge/napari-cellseg3d/0.0.1rc2/noarch/napari-cellseg3d-0.0.1rc2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-cellseg3d/0.0.1rc2/noarch/napari-cellseg3d-0.0.1rc2-pyhd8ed1ab_0.tar.bz2,conda,0.0.1rc2,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,0.0.1rc3,conda-forge/napari-cellseg3d/0.0.1rc3,0.0.1rc4,conda-forge/napari-cellseg3d/0.0.1rc4,0.0.2rc6,conda-forge/napari-cellseg3d/0.0.2rc6,conda,noarch/napari-cellseg3d-0.0.1rc3-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['dask-image >=0.6.0', 'imageio-ffmpeg >=0.4.5', 'itk >=5.2.0', 'magicgui', 'matplotlib-base >=3.4.1', 'monai >=0.8.1', 'napari >=0.4.14', 'nibabel', 'numpy', 'opencv >=4.5.5', 'pillow', 'pims', 'python >=3.8', 'pytorch >=1.11', 'qtpy', 'scikit-image >=0.19.2', 'tifffile >=2022.2.9', 'tqdm', 'vispy >=0.9.6']",pyhd8ed1ab_0,1660335801441.0,None-any-None,noarch,2022-08-12 20:27:31.993000+00:00,cbc4d58d4d28d3baf16fc0904efb2843,None,72968.0,conda-forge/napari-cellseg3d/0.0.1rc3/noarch/napari-cellseg3d-0.0.1rc3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-cellseg3d/0.0.1rc3/noarch/napari-cellseg3d-0.0.1rc3-pyhd8ed1ab_0.tar.bz2,conda,0.0.1rc3,conda-forge,['main'],conda,noarch/napari-cellseg3d-0.0.1rc4-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['dask-image >=0.6.0', 'einops', 'imageio-ffmpeg >=0.4.5', 'itk >=5.2.0', 'magicgui', 'matplotlib-base >=3.4.1', 'monai >=0.9.0', 'napari >=0.4.14', 'nibabel', 'numpy', 'opencv >=4.5.5', 'pillow', 'pims', 'python >=3.8', 'pytorch >=1.11', 'qtpy', 'scikit-image >=0.19.2', 'tifffile >=2022.2.9', 'tqdm', 'vispy >=0.9.6']",noarch,1661419300176.0,None-any-None,pyhd8ed1ab_0,2022-08-25 09:25:40.341000+00:00,6269255b25fb7e19a389996af1982e22,None,73669.0,conda-forge/napari-cellseg3d/0.0.1rc4/noarch/napari-cellseg3d-0.0.1rc4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-cellseg3d/0.0.1rc4/noarch/napari-cellseg3d-0.0.1rc4-pyhd8ed1ab_0.tar.bz2,conda,0.0.1rc4,conda-forge,['main'],conda,noarch/napari-cellseg3d-0.0.2rc6-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['dask-image >=0.6.0', 'einops', 'imageio-ffmpeg >=0.4.5', 'itk >=5.2.0', 'magicgui', 'matplotlib-base >=3.4.1', 'monai >=0.9.0', 'napari >=0.4.14', 'nibabel', 'numpy', 'opencv >=4.5.5', 'pillow', 'pims', 'python >=3.8', 'pytorch >=1.11', 'qtpy', 'scikit-image >=0.19.2', 'tifffile >=2022.2.9', 'tqdm', 'vispy >=0.9.6']",MIT,python,1682326222541.0,2023-04-24 08:53:03.558000+00:00,61f70ee0a8eee91d1ccddec8dae14983,4272f1ae3089aa99f75cb28bc6cacb9f6f19906c2789d19a4b4fb4c20ee60fc7,582512.0,conda-forge/napari-cellseg3d/0.0.2rc6/noarch/napari-cellseg3d-0.0.2rc6-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-cellseg3d/0.0.2rc6/noarch/napari-cellseg3d-0.0.2rc6-pyhd8ed1ab_0.conda,conda,0.0.2rc6,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,0.1.0,conda-forge/napari-cellseg3d/0.1.0,0.1.1,conda-forge/napari-cellseg3d/0.1.1,0.2.0,conda-forge/napari-cellseg3d/0.2.0,conda,noarch/napari-cellseg3d-0.1.0-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['einops', 'itk >=5.2.0', 'magicgui', 'matplotlib-base >=3.4.1', 'monai >=0.9.0', 'napari >=0.4.14', 'numpy', 'pyclesperanto-prototype', 'python >=3.8', 'pytorch >=1.11', 'qtpy >=2.4', 'scikit-image >=0.19.2', 'tifffile >=2022.2.9', 'tqdm']",noarch,1702629447347.0,None-any-None,pyhd8ed1ab_0,2023-12-15 08:39:43.886000+00:00,5dd942c982361d1d343e4a6bfb0d4a43,750ac21b93bc078db0c54c0e200d1f2fc25dbb67a825a8f04dede9d9bbd86b63,623606.0,conda-forge/napari-cellseg3d/0.1.0/noarch/napari-cellseg3d-0.1.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-cellseg3d/0.1.0/noarch/napari-cellseg3d-0.1.0-pyhd8ed1ab_0.conda,conda,0.1.0,conda-forge,['main'],conda,noarch/napari-cellseg3d-0.1.1-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['einops', 'itk >=5.2.0', 'magicgui', 'matplotlib-base >=3.4.1', 'monai >=0.9.0', 'napari >=0.4.14', 'numpy', 'pyclesperanto-prototype', 'python >=3.8', 'pytorch >=1.11', 'qtpy >=2.4', 'scikit-image >=0.19.2', 'tifffile >=2022.2.9', 'tqdm']",noarch,1702632315941.0,None-any-None,pyhd8ed1ab_0,2023-12-15 09:27:58.701000+00:00,72e55a371b6e330268cefa0b16cbd1e9,5a805cf0e5fe2690de70e9a4387bf2812c036344050aaa7c10d31f094a9094fb,622686.0,conda-forge/napari-cellseg3d/0.1.1/noarch/napari-cellseg3d-0.1.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-cellseg3d/0.1.1/noarch/napari-cellseg3d-0.1.1-pyhd8ed1ab_0.conda,conda,0.1.1,conda-forge,['main'],conda,noarch/napari-cellseg3d-0.2.0-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['einops', 'itk >=5.2.0', 'magicgui', 'matplotlib-base >=3.4.1', 'monai >=0.9.0', 'napari >=0.4.14', 'numpy', 'pyclesperanto-prototype', 'python >=3.8', 'pytorch >=1.11', 'qtpy >=2.4', 'scikit-image >=0.19.2', 'tifffile >=2022.2.9', 'tqdm']",MIT,python,1717508254767.0,2024-06-04 13:40:43.622000+00:00,3e29bb9690483c4c69d9dc25c2943083,cc38001864e713d1f8bc7f959b9a1b11f945dfdbfa661bb1ce476718229a61c5,625626.0,conda-forge/napari-cellseg3d/0.2.0/noarch/napari-cellseg3d-0.2.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-cellseg3d/0.2.0/noarch/napari-cellseg3d-0.2.0-pyhd8ed1ab_0.conda,conda,0.2.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +421,napari_hello,0.1.0,napari_hello,My napari plugin,Your Name,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +422,napari_psf_analysis,1.1.4,napari_psf_analysis,A plugin to analyse point spread functions (PSFs).,Tim-Oliver Buchholz,BSD-3-Clause,https://github.com/fmi-faim/napari-psf-analysis.git,62c6a21cdb466a21da48071d,['conda'],,https://github.com/fmi-faim/napari-psf-analysis,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-psf-analysis,http://api.anaconda.org/packages/conda-forge/napari-psf-analysis,http://anaconda.org/conda-forge/napari-psf-analysis,['0.1.2'],0.1.2,0.1.2,['noarch'],3.0,,['pyhd8ed1ab_0'],0.1.2,conda-forge/napari-psf-analysis/0.1.2,1.0,0.0,2022-07-07 09:06:34.469000+00:00,2023-06-18 08:42:02.495000+00:00,conda,noarch/napari-psf-analysis-0.1.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['matplotlib-base', 'napari', 'numpy', 'pandas', 'python >=3.7', 'scikit-image']",noarch,1657184651202.0,None-any-None,pyhd8ed1ab_0,2022-07-07 09:06:34.847000+00:00,ef1835fe0badafffbf0cea410845d11b,None,21637.0,conda-forge/napari-psf-analysis/0.1.2/noarch/napari-psf-analysis-0.1.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-psf-analysis/0.1.2/noarch/napari-psf-analysis-0.1.2-pyhd8ed1ab_0.tar.bz2,conda,0.1.2,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +423,napari_pyclesperanto_assistant,0.25.0,napari_pyclesperanto_assistant,GPU-accelerated image processing in napari using OpenCL,"Robert Haase, Talley Lambert",BSD-3-Clause,https://github.com/clesperanto/napari_pyclesperanto_assistant,6246dc8aaf92e1173d3e5122,['conda'],,https://github.com/clesperanto/napari_pyclesperanto_assistant,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-pyclesperanto-assistant,http://api.anaconda.org/packages/conda-forge/napari-pyclesperanto-assistant,http://anaconda.org/conda-forge/napari-pyclesperanto-assistant,"['0.12.0', '0.16.0', '0.17.1', '0.18.0', '0.18.3', '0.18.4', '0.19.0', '0.20.0', '0.21.0', '0.21.1', '0.21.2', '0.22.0', '0.22.1']",0.22.1,0.22.1,['noarch'],31.0,,"['pyha07c04f_1', 'pyhd8ed1ab_0']",0.12.0,conda-forge/napari-pyclesperanto-assistant/0.12.0,1.0,0.0,2022-04-01 11:05:43.975000+00:00,2024-12-27 09:03:55.898000+00:00,conda,noarch/napari-pyclesperanto-assistant-0.12.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['jupyter', 'jupytext', 'loguru', 'magicgui', 'napari >=0.4.7', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-tools-menu >=0.1.8', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pandas', 'pyclesperanto-prototype >=0.12.0', 'pyopencl', 'pyperclip', 'python >=3.6', 'scikit-image', 'toolz']",noarch,1648810968323.0,None-any-None,pyhd8ed1ab_0,2022-04-01 11:05:44.777000+00:00,d20431139506b869ce5f196d92614fcd,None,125324.0,conda-forge/napari-pyclesperanto-assistant/0.12.0/noarch/napari-pyclesperanto-assistant-0.12.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-pyclesperanto-assistant/0.12.0/noarch/napari-pyclesperanto-assistant-0.12.0-pyhd8ed1ab_0.tar.bz2,conda,0.12.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,0.16.0,conda-forge/napari-pyclesperanto-assistant/0.16.0,0.17.1,conda-forge/napari-pyclesperanto-assistant/0.17.1,0.18.0,conda-forge/napari-pyclesperanto-assistant/0.18.0,conda,noarch/napari-pyclesperanto-assistant-0.16.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['jupyter', 'jupytext', 'loguru', 'magicgui', 'napari >=0.4.7', 'napari-assistant', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-tools-menu >=0.1.8', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pandas', 'pyclesperanto-prototype >=0.12.0', 'pyopencl', 'pyperclip', 'python >=3.6', 'scikit-image', 'toolz', 'typing_extensions']",pyhd8ed1ab_0,1649080842976.0,None-any-None,noarch,2022-04-04 14:03:42.833000+00:00,29c0e66d3802cc2ce752db14cd00bfab,None,238453.0,conda-forge/napari-pyclesperanto-assistant/0.16.0/noarch/napari-pyclesperanto-assistant-0.16.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-pyclesperanto-assistant/0.16.0/noarch/napari-pyclesperanto-assistant-0.16.0-pyhd8ed1ab_0.tar.bz2,conda,0.16.0,conda-forge,['main'],conda,noarch/napari-pyclesperanto-assistant-0.17.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['jupyter', 'jupytext', 'loguru', 'magicgui', 'napari >=0.4.15', 'napari-assistant >=0.1.10', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-tools-menu >=0.1.8', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pandas', 'pyclesperanto-prototype >=0.17.1', 'pyopencl', 'pyperclip', 'python >=3.6', 'scikit-image', 'toolz', 'typing_extensions']",noarch,1651419638669.0,None-any-None,pyhd8ed1ab_0,2022-05-01 15:43:40.131000+00:00,b893556c9e587f2a3f52049b263f3f43,None,242034.0,conda-forge/napari-pyclesperanto-assistant/0.17.1/noarch/napari-pyclesperanto-assistant-0.17.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-pyclesperanto-assistant/0.17.1/noarch/napari-pyclesperanto-assistant-0.17.1-pyhd8ed1ab_0.tar.bz2,conda,0.17.1,conda-forge,['main'],conda,noarch/napari-pyclesperanto-assistant-0.18.0-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['jupyter', 'jupytext', 'loguru', 'magicgui', 'napari >=0.4.15', 'napari-assistant >=0.1.10', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-tools-menu >=0.1.8', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pandas', 'pyclesperanto-prototype >=0.17.1', 'pyopencl', 'pyperclip', 'python >=3.6', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,python,1652026775583.0,2022-05-08 16:22:27.198000+00:00,e735179b871e36054d1d538672d94fe9,None,242034.0,conda-forge/napari-pyclesperanto-assistant/0.18.0/noarch/napari-pyclesperanto-assistant-0.18.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-pyclesperanto-assistant/0.18.0/noarch/napari-pyclesperanto-assistant-0.18.0-pyhd8ed1ab_0.tar.bz2,conda,0.18.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,0.18.3,conda-forge/napari-pyclesperanto-assistant/0.18.3,0.18.4,conda-forge/napari-pyclesperanto-assistant/0.18.4,0.19.0,conda-forge/napari-pyclesperanto-assistant/0.19.0,conda,noarch/napari-pyclesperanto-assistant-0.18.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['jupyter', 'jupytext', 'loguru', 'magicgui', 'napari >=0.4.15', 'napari-assistant >=0.1.10', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-tools-menu >=0.1.8', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pandas', 'pyclesperanto-prototype >=0.17.1', 'pyopencl', 'pyperclip', 'python >=3.6', 'scikit-image', 'toolz', 'typing_extensions']",noarch,1659591708778.0,None-any-None,pyhd8ed1ab_0,2022-08-04 05:44:07.119000+00:00,2cb3757b5313f030dc28ebb877c1e034,None,242603.0,conda-forge/napari-pyclesperanto-assistant/0.18.3/noarch/napari-pyclesperanto-assistant-0.18.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-pyclesperanto-assistant/0.18.3/noarch/napari-pyclesperanto-assistant-0.18.3-pyhd8ed1ab_0.tar.bz2,conda,0.18.3,conda-forge,['main'],conda,noarch/napari-pyclesperanto-assistant-0.18.4-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['jupyter', 'jupytext', 'loguru', 'magicgui', 'napari >=0.4.15', 'napari-assistant >=0.1.10', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-tools-menu >=0.1.8', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pandas', 'pyclesperanto-prototype >=0.17.1', 'pyopencl', 'pyperclip', 'python >=3.6', 'scikit-image', 'toolz', 'typing_extensions']",noarch,1662063482200.0,None-any-None,pyhd8ed1ab_0,2022-09-01 20:21:08.865000+00:00,6b544a640afa43a3606ae1fa90325023,None,243386.0,conda-forge/napari-pyclesperanto-assistant/0.18.4/noarch/napari-pyclesperanto-assistant-0.18.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-pyclesperanto-assistant/0.18.4/noarch/napari-pyclesperanto-assistant-0.18.4-pyhd8ed1ab_0.tar.bz2,conda,0.18.4,conda-forge,['main'],conda,noarch/napari-pyclesperanto-assistant-0.19.0-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['jupyter', 'jupytext', 'loguru', 'magicgui', 'napari >=0.4.15', 'napari-assistant >=0.1.10', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-tools-menu >=0.1.8', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pandas', 'pyclesperanto-prototype >=0.19.0', 'pyopencl', 'pyperclip', 'python >=3.6', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,python,1662974402224.0,2022-09-12 09:22:43.078000+00:00,11df6477097d6be0d3330cd2d2eff8e2,None,243391.0,conda-forge/napari-pyclesperanto-assistant/0.19.0/noarch/napari-pyclesperanto-assistant-0.19.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-pyclesperanto-assistant/0.19.0/noarch/napari-pyclesperanto-assistant-0.19.0-pyhd8ed1ab_0.tar.bz2,conda,0.19.0,conda-forge,['main'],,,,,,,0.20.0,conda-forge/napari-pyclesperanto-assistant/0.20.0,0.21.0,conda-forge/napari-pyclesperanto-assistant/0.21.0,conda,noarch/napari-pyclesperanto-assistant-0.20.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['jupyter', 'jupytext', 'loguru', 'magicgui', 'napari >=0.4.15', 'napari-assistant >=0.1.10', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-tools-menu >=0.1.8', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pandas', 'pyclesperanto-prototype >=0.19.0', 'pyopencl', 'pyperclip', 'python >=3.6', 'scikit-image', 'toolz', 'typing_extensions']",noarch,1664054186856.0,None-any-None,pyhd8ed1ab_0,2022-09-24 21:19:16.585000+00:00,c39abb3a0a88c68bddf1a271b5fa46d7,None,243691.0,conda-forge/napari-pyclesperanto-assistant/0.20.0/noarch/napari-pyclesperanto-assistant-0.20.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-pyclesperanto-assistant/0.20.0/noarch/napari-pyclesperanto-assistant-0.20.0-pyhd8ed1ab_0.tar.bz2,conda,0.20.0,conda-forge,['main'],conda,noarch/napari-pyclesperanto-assistant-0.21.0-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['jupyter', 'jupytext', 'loguru', 'magicgui', 'napari >=0.4.15', 'napari-assistant >=0.1.10', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-tools-menu >=0.1.8', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pandas', 'pyclesperanto-prototype >=0.19.0', 'pyopencl', 'pyperclip', 'python >=3.6', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,python,1666531983171.0,2022-10-23 13:35:49.182000+00:00,39a9bd9fa73d460467760157eecc999f,None,245378.0,conda-forge/napari-pyclesperanto-assistant/0.21.0/noarch/napari-pyclesperanto-assistant-0.21.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari-pyclesperanto-assistant/0.21.0/noarch/napari-pyclesperanto-assistant-0.21.0-pyhd8ed1ab_0.tar.bz2,conda,0.21.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,conda,noarch/napari-pyclesperanto-assistant-0.21.1-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['jupyter', 'jupytext', 'loguru', 'magicgui', 'napari >=0.4.15', 'napari-assistant >=0.1.10', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-tools-menu >=0.1.8', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pandas', 'pyclesperanto-prototype >=0.19.0', 'pyopencl', 'pyperclip', 'python >=3.6', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,python,1671910716136.0,2022-12-24 19:41:03.288000+00:00,2dbbf0259760e5afc9e34fef640d2582,ded6bd74d5ba977d09a391e3755385e848c791eb84ef1c5e6a7a34374594058f,237849.0,conda-forge/napari-pyclesperanto-assistant/0.21.1/noarch/napari-pyclesperanto-assistant-0.21.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-pyclesperanto-assistant/0.21.1/noarch/napari-pyclesperanto-assistant-0.21.1-pyhd8ed1ab_0.conda,conda,0.21.1,conda-forge,['main'],conda,noarch/napari-pyclesperanto-assistant-0.21.2-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['jupyter', 'jupytext', 'loguru', 'magicgui', 'napari >=0.4.15', 'napari-assistant >=0.1.10', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-tools-menu >=0.1.8', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pandas', 'pyclesperanto-prototype >=0.21.1', 'pyopencl', 'pyperclip', 'python >=3.6', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,python,1672134850619.0,2022-12-27 09:56:20.477000+00:00,28bd258e4ce5d01e645bda1c70f79c11,31b8953c056280bf6f5499277fd48b50d5ecad1e3aeb1eb1b566daa6b3357756,237488.0,conda-forge/napari-pyclesperanto-assistant/0.21.2/noarch/napari-pyclesperanto-assistant-0.21.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-pyclesperanto-assistant/0.21.2/noarch/napari-pyclesperanto-assistant-0.21.2-pyhd8ed1ab_0.conda,conda,0.21.2,conda-forge,['main'],0.21.1,conda-forge/napari-pyclesperanto-assistant/0.21.1,conda,noarch/napari-pyclesperanto-assistant-0.22.0-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['jupyter', 'jupytext', 'loguru', 'magicgui', 'napari >=0.4.15', 'napari-assistant >=0.1.10', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-tools-menu >=0.1.8', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pandas', 'pyclesperanto-prototype >=0.21.1', 'pyopencl', 'pyperclip', 'python >=3.6', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,1674034512936.0,2023-01-18 09:37:34.550000+00:00,381a18e1553c61c3d19882dac47bf9d6,a9c3e1724c23dbd8bd56e552077a25b60f269078fcf5cf6d4fceca29bddd2118,237475.0,conda-forge/napari-pyclesperanto-assistant/0.22.0/noarch/napari-pyclesperanto-assistant-0.22.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-pyclesperanto-assistant/0.22.0/noarch/napari-pyclesperanto-assistant-0.22.0-pyhd8ed1ab_0.conda,conda,0.22.0,conda-forge,['main'],0.21.2,conda-forge/napari-pyclesperanto-assistant/0.21.2,conda,noarch/napari-pyclesperanto-assistant-0.22.1-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['jupyter', 'jupytext', 'loguru', 'magicgui', 'napari >=0.4.15', 'napari-assistant >=0.1.10', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-tools-menu >=0.1.8', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pandas', 'pyclesperanto-prototype >=0.21.1', 'pyopencl', 'pyperclip', 'python >=3.6', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,1676124148284.0,2023-02-11 14:04:13.063000+00:00,09308bbe7e744bbdc65f967e7826c2d9,cb713e547e861530e04cfcb537dfc4561b94cb5eb5b0ea661d994c241cd341a5,237553.0,conda-forge/napari-pyclesperanto-assistant/0.22.1/noarch/napari-pyclesperanto-assistant-0.22.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/napari-pyclesperanto-assistant/0.22.1/noarch/napari-pyclesperanto-assistant-0.22.1-pyhd8ed1ab_0.conda,conda,0.22.1,conda-forge,['main'],conda,noarch/napari-pyclesperanto-assistant-0.22.1-pyha07c04f_1.conda,None-any-None,False,noarch,pyha07c04f_1,1.0,"['jupyter', 'jupytext', 'loguru', 'magicgui', 'napari >=0.4.15', 'napari-assistant >=0.1.10', 'napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops >=0.2.0', 'napari-time-slicer >=0.4.0', 'napari-tools-menu >=0.1.8', 'napari-workflows >=0.1.1', 'numpy !=1.19.4', 'pandas', 'pyclesperanto-prototype >=0.21.1', 'pyopencl', 'pyperclip', 'python >=3.9', 'scikit-image', 'toolz', 'typing_extensions']",BSD-3-Clause,2024-12-27 09:03:39.929000+00:00,d938a5839ce351db383e9e8a927e3bec,b5b4ba3ce8b7eaab4663e5ec66a7b0b4cc83626d0eacf57ae5c1ad09a58d8c72,237996.0,conda-forge/napari-pyclesperanto-assistant/0.22.1/noarch/napari-pyclesperanto-assistant-0.22.1-pyha07c04f_1.conda,//api.anaconda.org/download/conda-forge/napari-pyclesperanto-assistant/0.22.1/noarch/napari-pyclesperanto-assistant-0.22.1-pyha07c04f_1.conda,conda,0.22.1,conda-forge,['main'],,, +424,napari_stress,0.3.8,napari_stress,Interactive surface analysis in napari for measuring mechanical stresses in biological tissues,"Johannes Soltwedel, Ben J. Gross, Elijah Shelton, Carlos Gomez, Otger Campas",BSD-3-Clause,,6573928f42fcd7a43b87c6e0,['conda'],,https://pypi.org/project/napari-stress,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari-stress,http://api.anaconda.org/packages/conda-forge/napari-stress,http://anaconda.org/conda-forge/napari-stress,"['0.2.8', '0.3.0', '0.3.2']",0.3.2,0.3.2,['noarch'],9.0,https://github.com/campaslab/napari-stress,['pyh9208f05_0'],0.2.8,conda-forge/napari-stress/0.2.8,1.0,0.0,2023-12-08 22:02:52.335000+00:00,2024-01-15 14:36:46.457000+00:00,conda,noarch/napari-stress-0.2.8-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['dask-core', 'distributed', 'joblib', 'magicgui <=0.8.0', 'matplotlib-base', 'mpmath', 'napari', 'napari-matplotlib >=1.1.0', 'napari-process-points-and-surfaces >=0.4.0', 'napari-segment-blobs-and-things-with-membranes', 'napari-tools-menu >=0.1.15', 'numpy <1.24.0', 'pandas', 'pygeodesic', 'pyocclient', 'pyshtools <=4.10.0', 'python >=3.7', 'scikit-image', 'scipy', 'seaborn', 'tqdm', 'vedo >=2023.4.3', 'vispy']",noarch,1702072787230.0,None-any-None,pyh9208f05_0,2023-12-08 22:02:52.786000+00:00,96debdac9c27b8b42fe16a5bb70563e0,0b9a478d2ede0893d03cb420ffbd896e893681091c3425d824703835cf3d0131,955014.0,conda-forge/napari-stress/0.2.8/noarch/napari-stress-0.2.8-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-stress/0.2.8/noarch/napari-stress-0.2.8-pyh9208f05_0.conda,conda,0.2.8,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,0.3.0,conda-forge/napari-stress/0.3.0,0.3.2,conda-forge/napari-stress/0.3.2,,,conda,noarch/napari-stress-0.3.0-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['dask-core', 'distributed', 'joblib', 'magicgui <=0.8.0', 'matplotlib-base', 'mpmath', 'napari', 'napari-matplotlib >=1.1.0', 'napari-process-points-and-surfaces >=0.4.0', 'napari-segment-blobs-and-things-with-membranes', 'napari-tools-menu >=0.1.15', 'numpy <1.24.0', 'pandas', 'pygeodesic', 'pyocclient', 'pyshtools <=4.10.0', 'python >=3.7', 'scikit-image', 'scipy', 'seaborn', 'tqdm', 'vedo >=2023.5.0', 'vispy']",pyh9208f05_0,1702081383743.0,None-any-None,noarch,2023-12-09 00:26:26.268000+00:00,b74bfc6b55c7e67c4d7ea5f8ffee0b2f,74f6b74c74a3c8051a33171490c791be207f720307d048556ffbefad74ca00b2,939568.0,conda-forge/napari-stress/0.3.0/noarch/napari-stress-0.3.0-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-stress/0.3.0/noarch/napari-stress-0.3.0-pyh9208f05_0.conda,conda,0.3.0,conda-forge,['main'],conda,noarch/napari-stress-0.3.2-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['dask-core', 'distributed', 'joblib', 'magicgui <=0.8.0', 'matplotlib-base', 'mpmath', 'napari', 'napari-matplotlib >=1.1.0', 'napari-process-points-and-surfaces >=0.4.0', 'napari-segment-blobs-and-things-with-membranes', 'napari-tools-menu >=0.1.15', 'numpy <1.24.0', 'pandas', 'pygeodesic', 'pyocclient', 'pyshtools <=4.10.0', 'python >=3.7', 'scikit-image', 'scipy', 'seaborn', 'tqdm', 'vedo >=2023.5.0', 'vispy']",noarch,1705329231354.0,None-any-None,pyh9208f05_0,2024-01-15 14:36:44.545000+00:00,bf50c62c5dfe390eff5f3eea60751724,33dba51e1fa21d2a2c55ac33e965cdde55d099146a0bc49caee4ad29d94b7384,936888.0,conda-forge/napari-stress/0.3.2/noarch/napari-stress-0.3.2-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/napari-stress/0.3.2/noarch/napari-stress-0.3.2-pyh9208f05_0.conda,conda,0.3.2,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +425,napari_svetlana,1.2.0,napari_svetlana,A classification plugin for the ROIs of a segmentation mask.,Clément Cazorla,GPL-3.0-only,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +426,napari_video,0.2.10,napari_video,napari plugin for reading videos.,Jan Clemens,,https://github.com/janclemenslab/napari-video,61fe70e43e9442d67a3ca040,['conda'],,https://github.com/janclemenslab/napari-video,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/napari_video,http://api.anaconda.org/packages/conda-forge/napari_video,http://anaconda.org/conda-forge/napari_video,"['0.2.7', '0.2.8', '0.2.9']",0.2.9,0.2.9,['noarch'],5.0,,['pyhd8ed1ab_0'],0.2.7,conda-forge/napari_video/0.2.7,1.0,0.0,2022-02-05 12:43:13.874000+00:00,2023-06-18 08:40:47.480000+00:00,conda,noarch/napari_video-0.2.7-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['dask-core', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.6', 'pyvideoreader']",noarch,1644064893398.0,None-any-None,pyhd8ed1ab_0,2022-02-05 12:43:14.119000+00:00,fc063bef816b4af6431a8c9415753680,None,8145.0,conda-forge/napari_video/0.2.7/noarch/napari_video-0.2.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari_video/0.2.7/noarch/napari_video-0.2.7-pyhd8ed1ab_0.tar.bz2,conda,0.2.7,conda-forge,['main'],public,,0.2.1,napari_video.napari_get_reader,napari_get_reader,napari_video.napari_video:napari_get_reader,napari_video.napari_get_reader,['*'],True,2.1,napari_video,0.2.10,,napari plugin for reading videos.,"# napari-video [![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari_video)](https://napari-hub.org/plugins/napari_video) Napari plugin for working with videos. @@ -41459,8 +43461,8 @@ Then - We can also request specific ROIs and channels. For instance, `vr[100:200:10,100:400,800:850,1]` will return an array with shape `(10, 300, 50, 1)`. -",text/markdown,https://github.com/janclemenslab/napari-video,Jan Clemens,clemensjan@googlemail.com,,"['License :: OSI Approved :: MIT License', 'Framework :: napari', 'Operating System :: OS Independent']","['numpy', 'pyvideoreader']",>=3.6,"['Bug Tracker, https://github.com/janclemenslab/napari-video/issues', 'Documentation, https://github.com/janclemenslab/napari-video/blob/main/README.md', 'Source Code, https://github.com/janclemenslab/napari-video', 'User Support, https://github.com/janclemenslab/napari-video/issues']",,True,0.2.8,conda-forge/napari_video/0.2.8,0.2.9,conda-forge/napari_video/0.2.9,,,conda,noarch/napari_video-0.2.8-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['dask-core', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.6', 'pyvideoreader']",pyhd8ed1ab_0,1644333780318.0,None-any-None,noarch,2022-02-08 15:24:32.058000+00:00,7091ea79acf44d8df259b2e3dff895e9,None,8116.0,conda-forge/napari_video/0.2.8/noarch/napari_video-0.2.8-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari_video/0.2.8/noarch/napari_video-0.2.8-pyhd8ed1ab_0.tar.bz2,conda,0.2.8,conda-forge,['main'],conda,noarch/napari_video-0.2.9-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['dask-core', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.6', 'pyvideoreader']",noarch,1661268945197.0,None-any-None,pyhd8ed1ab_0,2022-08-23 15:37:27.516000+00:00,4bd39c2a7ab7ca00ee24c69d63ab53f0,None,8916.0,conda-forge/napari_video/0.2.9/noarch/napari_video-0.2.9-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari_video/0.2.9/noarch/napari_video-0.2.9-pyhd8ed1ab_0.tar.bz2,conda,0.2.9,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -406,napping,0.2.4,napping,Control point mapping and coordination transformation using napari,Jonas Windhager,MIT,https://github.com/BodenmillerGroup/napping,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,,,,,,,2.1,napping,0.2.4,,Control point mapping and coordination transformation using napari,"# napping +",text/markdown,https://github.com/janclemenslab/napari-video,Jan Clemens,clemensjan@googlemail.com,,"['License :: OSI Approved :: MIT License', 'Framework :: napari', 'Operating System :: OS Independent']","['numpy', 'pyvideoreader']",>=3.6,"['Bug Tracker, https://github.com/janclemenslab/napari-video/issues', 'Documentation, https://github.com/janclemenslab/napari-video/blob/main/README.md', 'Source Code, https://github.com/janclemenslab/napari-video', 'User Support, https://github.com/janclemenslab/napari-video/issues']",,True,0.2.8,conda-forge/napari_video/0.2.8,0.2.9,conda-forge/napari_video/0.2.9,,,conda,noarch/napari_video-0.2.8-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['dask-core', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.6', 'pyvideoreader']",pyhd8ed1ab_0,1644333780318.0,None-any-None,noarch,2022-02-08 15:24:32.058000+00:00,7091ea79acf44d8df259b2e3dff895e9,None,8116.0,conda-forge/napari_video/0.2.8/noarch/napari_video-0.2.8-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari_video/0.2.8/noarch/napari_video-0.2.8-pyhd8ed1ab_0.tar.bz2,conda,0.2.8,conda-forge,['main'],conda,noarch/napari_video-0.2.9-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['dask-core', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.6', 'pyvideoreader']",noarch,1661268945197.0,None-any-None,pyhd8ed1ab_0,2022-08-23 15:37:27.516000+00:00,4bd39c2a7ab7ca00ee24c69d63ab53f0,None,8916.0,conda-forge/napari_video/0.2.9/noarch/napari_video-0.2.9-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/napari_video/0.2.9/noarch/napari_video-0.2.9-pyhd8ed1ab_0.tar.bz2,conda,0.2.9,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +427,napping,0.2.4,napping,Control point mapping and coordination transformation using napari,Jonas Windhager,MIT,https://github.com/BodenmillerGroup/napping,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,,,,,,,2.1,napping,0.2.4,,Control point mapping and coordination transformation using napari,"# napping [![PyPI](https://img.shields.io/pypi/v/napping.svg?color=green)](https://pypi.org/project/napping) [![License](https://img.shields.io/pypi/l/napping.svg?color=green)](https://github.com/BodenmillerGroup/napping/raw/main/LICENSE) @@ -41499,8 +43501,8 @@ Created and maintained by Jonas Windhager [jonas.windhager@uzh.ch](mailto:jonas. ## License [MIT](https://github.com/BodenmillerGroup/napping/blob/main/LICENSE.md) -",text/markdown,https://github.com/BodenmillerGroup/napping,Jonas Windhager,jonas.windhager@uzh.ch,MIT,"['Development Status :: 4 - Beta', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['imagecodecs', 'imageio', 'napari[all] (>=0.4.16)', 'numpy', 'pandas', 'qtpy', 'scikit-image']",>=3.8,"['Bug Tracker, https://github.com/BodenmillerGroup/napping/issues', 'Documentation, https://github.com/BodenmillerGroup/napping/#README.md', 'Source Code, https://github.com/BodenmillerGroup/napping', 'User Support, https://github.com/BodenmillerGroup/napping/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -407,natari,0.2.7,natari,Napari gaming,Robert Haase,BSD-3-Clause,https://github.com/haesleinhuepf/natari,61fa6dcc019cbc148aee3684,['conda'],,https://github.com/haesleinhuepf/natari,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/natari,http://api.anaconda.org/packages/conda-forge/natari,http://anaconda.org/conda-forge/natari,['0.2.7'],0.2.7,0.2.7,['noarch'],3.0,,['pyhd8ed1ab_0'],0.2.7,conda-forge/natari/0.2.7,1.0,0.0,2022-02-02 11:40:56.327000+00:00,2023-06-18 08:40:41.067000+00:00,conda,noarch/natari-0.2.7-pyhd8ed1ab_0.tar.bz2,0.0,Unlicense AND CC0-1.0,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'python >=3.7', 'scipy']",noarch,1643801885866.0,None-any-None,pyhd8ed1ab_0,2022-02-02 11:40:57.654000+00:00,9d7b946510f204f0807cf2069ac4eb2b,None,605865.0,conda-forge/natari/0.2.7/noarch/natari-0.2.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/natari/0.2.7/noarch/natari-0.2.7-pyhd8ed1ab_0.tar.bz2,conda,0.2.7,conda-forge,['main'],public,,0.2.1,natari.napari_experimental_provide_function,cell_counting_arcade_with_default_image,natari.cell_counting_arcade:cell_counting_arcade_with_default_image,,,,2.1,natari,0.2.7,['UNKNOWN'],Napari gaming,"# natari +",text/markdown,https://github.com/BodenmillerGroup/napping,Jonas Windhager,jonas.windhager@uzh.ch,MIT,"['Development Status :: 4 - Beta', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['imagecodecs', 'imageio', 'napari[all] (>=0.4.16)', 'numpy', 'pandas', 'qtpy', 'scikit-image']",>=3.8,"['Bug Tracker, https://github.com/BodenmillerGroup/napping/issues', 'Documentation, https://github.com/BodenmillerGroup/napping/#README.md', 'Source Code, https://github.com/BodenmillerGroup/napping', 'User Support, https://github.com/BodenmillerGroup/napping/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +428,natari,0.2.7,natari,Napari gaming,Robert Haase,BSD-3-Clause,https://github.com/haesleinhuepf/natari,61fa6dcc019cbc148aee3684,['conda'],,https://github.com/haesleinhuepf/natari,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/natari,http://api.anaconda.org/packages/conda-forge/natari,http://anaconda.org/conda-forge/natari,['0.2.7'],0.2.7,0.2.7,['noarch'],3.0,,['pyhd8ed1ab_0'],0.2.7,conda-forge/natari/0.2.7,1.0,0.0,2022-02-02 11:40:56.327000+00:00,2023-06-18 08:40:41.067000+00:00,conda,noarch/natari-0.2.7-pyhd8ed1ab_0.tar.bz2,0.0,Unlicense AND CC0-1.0,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-tools-menu', 'numpy', 'python >=3.7', 'scipy']",noarch,1643801885866.0,None-any-None,pyhd8ed1ab_0,2022-02-02 11:40:57.654000+00:00,9d7b946510f204f0807cf2069ac4eb2b,None,605865.0,conda-forge/natari/0.2.7/noarch/natari-0.2.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/natari/0.2.7/noarch/natari-0.2.7-pyhd8ed1ab_0.tar.bz2,conda,0.2.7,conda-forge,['main'],public,,0.2.1,natari.napari_experimental_provide_function,cell_counting_arcade_with_default_image,natari.cell_counting_arcade:cell_counting_arcade_with_default_image,,,,2.1,natari,0.2.7,['UNKNOWN'],Napari gaming,"# natari [![License](https://img.shields.io/pypi/l/natari.svg?color=green)](https://github.com/haesleinhuepf/natari/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/natari.svg?color=green)](https://pypi.org/project/natari) @@ -41580,8 +43582,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/haesleinhuepf/natari,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari', 'scipy', 'napari-tools-menu']",>=3.7,"['Bug Tracker, https://github.com/haesleinhuepf/natari/issues', 'Documentation, https://github.com/haesleinhuepf/natari#README.md', 'Source Code, https://github.com/haesleinhuepf/natari', 'User Support, https://github.com/haesleinhuepf/natari/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,natari.napari_experimental_provide_function,ping_pong,natari.ping_pong:ping_pong,natari.napari_experimental_provide_function,snake,natari.snake:snake,natari.napari_experimental_provide_function,sliding_puzzle,natari.sliding_puzzle:sliding_puzzle,natari.napari_experimental_provide_function,cell_counting_arcade_with_default_image,True,natari.napari_experimental_provide_function,ping_pong,True,natari.napari_experimental_provide_function,snake,True,natari.napari_experimental_provide_function,sliding_puzzle,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -408,nellie,0.3.2,Nellie,"Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy",Austin E. Y. T. Lefebvre,,https://github.com/aelefebv/nellie,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,nellie.loader,Nellie,nellie_napari:NellieLoader,,,,2.1,nellie,0.3.2,,"Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy","# Nellie +",text/markdown,https://github.com/haesleinhuepf/natari,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari', 'scipy', 'napari-tools-menu']",>=3.7,"['Bug Tracker, https://github.com/haesleinhuepf/natari/issues', 'Documentation, https://github.com/haesleinhuepf/natari#README.md', 'Source Code, https://github.com/haesleinhuepf/natari', 'User Support, https://github.com/haesleinhuepf/natari/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,natari.napari_experimental_provide_function,ping_pong,natari.ping_pong:ping_pong,natari.napari_experimental_provide_function,snake,natari.snake:snake,natari.napari_experimental_provide_function,sliding_puzzle,natari.sliding_puzzle:sliding_puzzle,natari.napari_experimental_provide_function,cell_counting_arcade_with_default_image,True,natari.napari_experimental_provide_function,ping_pong,True,natari.napari_experimental_provide_function,snake,True,natari.napari_experimental_provide_function,sliding_puzzle,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +429,nellie,0.4.1,Nellie,"Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy",Austin E. Y. T. Lefebvre,,https://github.com/aelefebv/nellie,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,nellie.loader,Nellie,nellie_napari:NellieLoader,,,,2.1,nellie,0.4.1,,"Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy","# Nellie ## Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy *arXiv* @@ -41602,14 +43604,30 @@ https://github.com/aelefebv/nellie/assets/26515909/1df8bf1b-7116-4d19-b5fb-9658f - It is recommended (but usually not required) to [create a new environment](https://docs.python.org/3/library/venv.html) for Nellie to avoid conflicts with other packages. - May take several minutes to install. - Choose one of the following methods, and only one! +- If you do not already have Python 3.9 or higher installed, download it via the [python website]([url](https://www.python.org/downloads/)). + +https://github.com/user-attachments/assets/50b1cd4b-6df7-4f19-8db3-4dcc03388513 + + ### Option 1. Via Napari plugin manager: If not already installed, install Napari: https://napari.org/stable/tutorials/fundamentals/installation + +https://github.com/user-attachments/assets/0d44abe5-f575-4bd4-962a-2c102faf737c + + 1. Open Napari 2. Go to ```Plugins > Install/Uninstall Plugins...``` 3. Search for Nellie and click ```Install``` +4. Make sure Nellie is updated to the latest version. +5. Restart Napari. ### Option 2. Via PIP: + + +https://github.com/user-attachments/assets/b63df093-e3e1-49cb-925b-7efce36b9015 + + ```bash -pip install nellie +python3 -m pip install nellie ``` #### Option 2a for NVIDIA GPU acceleration, optional (Windows, Linux): To use GPU acceleration via NVIDIA GPUs, you also need to install cupy: @@ -41624,15 +43642,23 @@ pip install cupy-cudaXXx ## Usage The sample dataset shown below is in the repo if you want to play around without, and can be downloaded [here](https://github.com/aelefebv/nellie/tree/main/sample_data). -https://github.com/aelefebv/nellie/assets/26515909/05199fed-ed8c-4237-b3ba-0a3f4cdcb337 - ### General data preparation - It is strongly recommended to have your data in a parsable format, such as .ome.tif, .nd2, or other raw data files from microscopes. - Importing into ImageJ/FIJI and saving via BioFormats with the proper image dimensions should do the trick. - If the metadata cannot be parsed, you will have to manually enter it. - It is also recommended to crop your image as much as possible to reduce processing time and memory usage. But really, unless you have massive lightsheet data, it should be pretty fast (seconds to minutes on a typical modern desktop computer). -https://github.com/aelefebv/nellie/assets/26515909/372d07a8-15a0-4926-8594-108dd4b97280 +### 3D + Timeseries dataset + +https://github.com/user-attachments/assets/531f76ee-f58e-4058-b5dc-4fdf09af3660 + +### 3D (no Timeseries) dataset + +https://github.com/user-attachments/assets/30d55bfa-bade-4987-88f0-255bb36cb7e8 + +### 2D + Timeseries dataset + +https://github.com/user-attachments/assets/d534c6e1-df31-4964-9c12-edff56228be3 ### Running Nellie's processing pipeline 1. Start Napari (open a Terminal and type napari) @@ -41645,15 +43671,13 @@ https://github.com/aelefebv/nellie/assets/26515909/372d07a8-15a0-4926-8594-108dd - If the metadata boxes do not fill in automatically and turn red, this means Nellie did not detect that metadata portion from your image, and you must manually enter it or reformat your image and try again. - The metadata slot will appear green if it is in the correct format. - *Note, if you are batch processing, the metadata must be the same for all images if any of them are in an incorrect format (this will be fixed eventually). If they are different, but all pass validation, then it will process fine. - - You can preview 2 time points of your image via the ```Open preview``` button once the metadata is filled in to ensure it looks correct. + - You can preview your image via the ```Open preview``` button once the metadata is filled in to ensure it looks correct. + - From this tab, you can also choose what time points and channel you want to analyze, if your file contains more than one slice in those dimensions. 4. Click the ```Process``` tab. - - If you have multiple fluorescence channels, select the channel you want to process/analyze. - - If you only want to analyze up to a certain timepoint, you can set this in slider. By default it will run all timepoints. - - If you have odd noise on the edges of your image, check the ```Remove image edges``` checkbox. 5. You can run the full pipeline with ```Run Nellie```, or run individual steps below. - Steps can only be run once its previous step has been run. - Likewise, visualizations in the ```Visualization``` tab can only be opened once its respective step has been run. -6. All intermediate files and output csvs will be saved to ```[image_directory]/nellie_output/```. +6. All intermediate files and output csvs will be saved to ```[image_directory]/nellie_output/```, which can be accessed via the ```Open output directory``` button. - A separate .csv is created for each level of the organellar hierarchy. 7. Once features have been exported, Nellie will automatically detect this, and allow analysis via the ```Analyze``` tab. - Analysis at this point is optional, but can be helpful for visualizing, and selectively exporting data. @@ -41668,16 +43692,12 @@ https://github.com/aelefebv/nellie/assets/26515909/372d07a8-15a0-4926-8594-108dd 4. ```Mocap Markers```: Visualize the mocap markers used for waypoints. 5. ```Reassigned Labels```: Visualize the organelle and branch instance segmentation masks where voxels are reassigned based on the first timepoint. 4. To visualize tracks, open and select one of the segmentation layers. -5. ```Alt+Click``` on a label to visualize the track of that selected organelle/branch across all timepoints. - - If the segmentation labels are selected, it will generate tracks for all voxels in the selected timepoint only. - - If the reassigned labels are selected, you can choose to generate tracks for all voxels across all timepoints. - - You can skip voxels to track so that the area is not too crowded by tracks. - - *Note: If you have a 3D image, toggle to 2D mode via the ```Toggle 2D/3D view``` at the bottom left before ```Alt+Click```ing (eventually I'll get it to work while in 3D mode). +5. To visualize all tracks of all organelles/branches, click the ```Visualize all frame labels' tracks``` button. +6. To visualize all tracks of a specific organelle/branch: + 1. Click on the layer, and use the eyedropper tool at the top to select an organelle/branch to track. + 2. Click the ```Visualize selected label's tracks```. ### Using Nellie's analysis plugin - -https://github.com/aelefebv/nellie/assets/26515909/7f4f09a4-3687-4635-988d-e1d16ad2a4af - 1. Follow the previous processing steps, you only need to do this once per file as long as you don't move or delete the files. 2. Open the ```Analyze``` tab, select the hierarchy level you want to visualize from the dropdown. 3. Select the level-specific feature you want to visualize from the new dropdown. @@ -41746,8 +43766,184 @@ https://github.com/aelefebv/nellie/assets/26515909/db76d388-a9cc-4650-b93d-69d35 https://github.com/aelefebv/nellie/assets/26515909/58bda3cb-6489-4620-8584-a3728cd6b2ec -",text/markdown,https://github.com/aelefebv/nellie,Austin E. Y. T. Lefebvre,austin.e.lefebvre+nellie@gmail.com,,['Framework :: napari'],"['numpy==1.26.4', 'scipy==1.12.0', 'scikit-image==0.22.0', 'nd2==0.9.0', 'ome-types==0.5.2', 'pandas==2.2.1', 'matplotlib==3.8.3', 'napari[all]', 'imagecodecs', 'pydantic==2.9.2', 'pydantic-core==2.23.4']",>=3.9,,,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,nellie.loader,Nellie,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -409,nfinder,0.3,nfinder,Automatic inference of neighboring cells based on their Delaunay triangulation.,Santiago N. Rodriguez Alvarez,,https://github.com/santi-rodriguez/nfinder,61fd5613615390413872c4e6,['conda'],,https://github.com/santi-rodriguez/nfinder,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/nfinder,http://api.anaconda.org/packages/conda-forge/nfinder,http://anaconda.org/conda-forge/nfinder,"['0.1', '0.2', '0.3']",0.3,0.3,['noarch'],5.0,,['pyhd8ed1ab_0'],0.1,conda-forge/nfinder/0.1,1.0,0.0,2022-02-04 16:36:31.421000+00:00,2023-06-18 08:40:46.936000+00:00,conda,noarch/nfinder-0.1-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['matplotlib-base', 'napari', 'napari-plugin-engine', 'numpy', 'pandas', 'python >=3.7', 'scikit-image', 'scipy']",noarch,1643992449649.0,None-any-None,pyhd8ed1ab_0,2022-02-04 16:36:32.962000+00:00,166a2bb8b363eb309ecd5f46d67a3e90,None,10524.0,conda-forge/nfinder/0.1/noarch/nfinder-0.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/nfinder/0.1/noarch/nfinder-0.1-pyhd8ed1ab_0.tar.bz2,conda,0.1,conda-forge,['main'],public,,0.2.1,nfinder.find,find,nfinder.plugins.find:find,,,,2.1,nfinder,0.3,,Automatic inference of neighboring cells based on their Delaunay triangulation.,"# Nfinder +## Code contents: +Full documentation can be found within the code, and compiled by Sphinx in the file docs/_build/html/index.html + +### Nellie pipeline +All the Nellie pipeline code is found within the nellie folder +- File and metadata loading, and file preparation is found at nellie/im_info/verifier.py +- Preprocessing is found at nellie/segmentation/filtering.py +- Segmentation of organelles is found at nellie/segmentation/labelling.py +- Skeletonization and segmentation of branches is found at nellie/segmentation/networking.py +- Mocap marker detection is found at nellie/segmentation/mocap_marking.py +- Mocap marker tracking is found at nellie/tracking/hu_tracking.py +- Voxel reassignment via flow interpolation is found at nellie/tracking/voxel_reassignment.py +- Hierarchical feature extraction is found at nellie/feature_extraction/hierarchical.py + +### Nellie Napari plugin +All the Napari plugin code is found with the nellie_napari folder +- The home tab is found at nellie_napari/nellie_home.py +- The file selection tab is found at nellie_napari/nellie_fileselect.py +- The processing tab is found at nellie_napari/nellie_processor.py +- The visualization tab is found at nellie_napari/nellie_visualizer.py +- The analysis tab is found at nellie_napari/nellie_analysis.py +- The settings tab is found at nellie_napari/nellie_settings.py +",text/markdown,https://github.com/aelefebv/nellie,Austin E. Y. T. Lefebvre,austin.e.lefebvre+nellie@gmail.com,,['Framework :: napari'],"['numpy==1.26.4', 'scipy==1.12.0', 'scikit-image==0.22.0', 'nd2==0.9.0', 'ome-types==0.5.2', 'pandas==2.2.1', 'matplotlib==3.8.3', 'napari[all]', 'imagecodecs', 'pydantic==2.9.2', 'pydantic-core==2.23.4']",>=3.9,,,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,nellie.loader,Nellie,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +430,neurofly,0.1.3,neurofly,A framework to annotate single neurons at whole-brain scale,,GPL-3.0-or-later,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,neurofly.segs_annotator,Segs Annotator,neurofly:Annotator,,,,2.1,neurofly,0.1.3,,A framework to annotate single neurons at whole-brain scale,"# NeuroFly: A framework for single neuron reconstruction at whole-brain scale + +This package provides tools for semi-automatic neuron reconstruction. Features based on deep learning, like image segmentation and deconvolution are implemented in [tinygrad](https://github.com/tinygrad/tinygrad), which can run on almost any GPU (NVIDIA, AMD, Apple, Qualcomm, Intel). + + + +## Installation + +Install the latest version +``` +pip install --upgrade git+https://github.com/beanli161514/neurofly.git +``` +or +``` +pip install neurofly +``` + +## Dataset + +We provide several expert-proofread reconstruction results for testing, model training, and evaluation. [Zenodo Link](https://zenodo.org/records/13328867) + + +### Content of samples +| name | size | species | label type | imaging | +|----------------|-------|---------|-------------|---------| +| rm009_labeled | 629MB | macaque | skeleton | VISoR | +| mouse_labeled | 260MB | mouse | skeleton | VISoR | +| z002_labeled | 204MB | mouse | skeleton | VISoR | +| fmost_labeled | 370MB | mouse | skeleton | fMOST | +| RM009_noisy_1 | 65MB | macaque | morphology | VISoR | +| RM009_noisy_2 | 65MB | macaque | morphology | VISoR | +| fmost_test | 65MB | mouse | morphology | fMOST | +| z002_dendrites | 768MB | mouse | morphology | VISoR | +| RM009_arbor_1 | 288MB | macaque | morphology | VISoR | +| RM009_axons_1 | 600MB | macaque | morphology | VISoR | +| RM009_axons_2 | 600MB | macaque | morphology | VISoR | +| z002 | 8.92G | mouse | morphology* | VISoR | + +$*$ annotation in progress +### Label format +Morphology labels are graphs saved in SQLite database with 3 tables: +| segments | nodes | edges | +|:--------------:|:-------:|:-------:| +| sid | nid | src | +| points | coord | des | +| sampled_points | creator | date | +| | status | creator | +| | type | | +| | date | | +| | checked | | + +Segments are results of the segmentation stage, they are used to generate initial nodes and edges. + + +## Basic usage example + + + +NeuroFly packaged 4 napari plugins for image browsing, image segmentation, and data annotation. + + + +### Segmentation + +NeuroFly supports whole brain image saved in hierarchical data structures(ims, h5, and zarr) in [Imaris File Format](https://imaris.oxinst.com/support/imaris-file-format) and small image volumes saved in single-channel tiff format. Here we use a mouse brain in our dataset named z002.zarr.zip as example. + +This brain is sparsely labeled, which means only a tiny puny part of neurons are lighted and imaged. To extract these foreground singals, you can use the provided command line interface 'seg'. We provide a default weight trained on images captured by VISoR and fMOST. +``` +seg -i z002.zarr.zip -vis -d z002.db +``` +or use the graphical interface + + + + +This process may take about 10 hours depending on your you hardware configuration. When finished, you should see the extracted segments and a database file named z002.db in your working dictionary. + + +An image block with severe contamination and the segmentation result + + + + +### Manual connection and proofreading + +Launch annotation tool from napari menu, Plugin -> neurofly -> Segs Annotator + +#### Load data +Load image file (z002.zarr.zip) and database file (z002.db), then click **refresh panorama** button to show the panorama view. + + + + +#### Select one node as start point of annotation +In panorama mode, you can easily identify sparse, bright signals that are promising for reconstruction. The silde bars 'short segs filter', 'length thres', and 'point size' can be adjusted to hide noise and short segments. + +If you can clearly identify foreground segments, click on one of the conspicuous segments to select it as start point of annotation. Once selected, the id of picked node will be displayed at **node selection**. Then click 'switch mode' to switch to labeling mode, and the tasks will be generated automatically. + + +#### Task generation +Given a selected node, task generator analyses its connected component and extract all unchecked terminal nodes. The tasks are designed very simple: Connect the center node with the surrounding nodes if there should be an edge. The criterion is whether the edge aligns well with the imaged neuron fibers. + + + + +#### Node operations + + +In each task, a center node and nearby segments are rendered, you can add/remove nodes and edges to get a reasonable local structure. + + +Left click on nodes to add/remove an edge between it and the center node + + + +Right click to remove a node + + + +Press 'g' or use left panel to switch to 'image' layer, then right click to add points + + + +Use dropdown selection in right panel to add type label for center node. + + + +#### Deconvolution + +Press 'i' or click on 'deconvolution' to deconvolve the image + + + + +#### Proofreading + +If you find something wrong when labeling, for example, two somas are connected together. You can use proofreading mode to check the neuron branch by branch. + + + + +### Performance +NeuroFly supports rendering of more than ten million points. (tested on M3 Macbook Air and RTX 3090 workstation) + + + + + +### Export as swc file +Switch to panorama mode, adjust 'length_thres' to filter out short segments and keep only complete neurons. Then press 'export swc files', each neuron will be saved as one .swc file in your working dictionary. + + + +",text/markdown,,,Rubin Zhao ,GPL-3.0-or-later,"['Framework :: napari', 'Programming Language :: Python :: 3']","['PyQt5', 'napari', 'Rtree', 'networkx', 'tqdm', 'magicgui', 'brightest-path-lib', 'tifffile', 'scikit-image', 'scipy', 'torch', 'tinygrad>=0.9.2', 'pathlib', 'h5py', 'zarr']",>=3.8,"['Homepage, https://github.com/beanli161514/neurofly']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,neurofly.simple_viewer,Simple Viewer,neurofly:SimpleViewer,neurofly.skel_annotator,Skeleton Annotator,neurofly:SkelAnnotator,neurofly.neuron_seger,Neuron Seger,neurofly:NeuronSeger,neurofly.segs_annotator,Segs Annotator,False,neurofly.simple_viewer,Simple Viewer,False,neurofly.skel_annotator,Skeleton Annotator,False,neurofly.neuron_seger,Neuron Seger,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +431,nfinder,0.3,nfinder,Automatic inference of neighboring cells based on their Delaunay triangulation.,Santiago N. Rodriguez Alvarez,,https://github.com/santi-rodriguez/nfinder,61fd5613615390413872c4e6,['conda'],,https://github.com/santi-rodriguez/nfinder,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/nfinder,http://api.anaconda.org/packages/conda-forge/nfinder,http://anaconda.org/conda-forge/nfinder,"['0.1', '0.2', '0.3']",0.3,0.3,['noarch'],5.0,,['pyhd8ed1ab_0'],0.1,conda-forge/nfinder/0.1,1.0,0.0,2022-02-04 16:36:31.421000+00:00,2023-06-18 08:40:46.936000+00:00,conda,noarch/nfinder-0.1-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['matplotlib-base', 'napari', 'napari-plugin-engine', 'numpy', 'pandas', 'python >=3.7', 'scikit-image', 'scipy']",noarch,1643992449649.0,None-any-None,pyhd8ed1ab_0,2022-02-04 16:36:32.962000+00:00,166a2bb8b363eb309ecd5f46d67a3e90,None,10524.0,conda-forge/nfinder/0.1/noarch/nfinder-0.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/nfinder/0.1/noarch/nfinder-0.1-pyhd8ed1ab_0.tar.bz2,conda,0.1,conda-forge,['main'],public,,0.2.1,nfinder.find,find,nfinder.plugins.find:find,,,,2.1,nfinder,0.3,,Automatic inference of neighboring cells based on their Delaunay triangulation.,"# Nfinder Automatic inference of neighboring cells based on their Delaunay triangulation. ## Dependencies @@ -41776,8 +43972,8 @@ For usage examples, please check out the [notebook](https://github.com/santi-rod -",text/markdown,https://github.com/santi-rodriguez/nfinder,Santiago N. Rodriguez Alvarez,rodriguezsantiago96@gmail.com,,"['Development Status :: 4 - Beta', 'Programming Language :: Python :: 3.7', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Framework :: napari']",,>=3.7,,,True,0.2,conda-forge/nfinder/0.2,0.3,conda-forge/nfinder/0.3,,,conda,noarch/nfinder-0.2-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['matplotlib-base', 'napari', 'napari-plugin-engine', 'numpy', 'pandas', 'python >=3.7', 'scikit-image', 'scipy']",pyhd8ed1ab_0,1644334270589.0,None-any-None,noarch,2022-02-08 15:33:53.237000+00:00,08ada1ff395294ba0a515877c49dc720,None,101933.0,conda-forge/nfinder/0.2/noarch/nfinder-0.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/nfinder/0.2/noarch/nfinder-0.2-pyhd8ed1ab_0.tar.bz2,conda,0.2,conda-forge,['main'],conda,noarch/nfinder-0.3-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['magicgui', 'matplotlib-base', 'napari', 'napari-plugin-engine', 'numpy', 'pandas', 'python >=3.7', 'scikit-image', 'scipy']",noarch,1644636220406.0,None-any-None,pyhd8ed1ab_0,2022-02-12 03:26:15.779000+00:00,fb4e9428c56fc926fa229889db810a4a,None,102426.0,conda-forge/nfinder/0.3/noarch/nfinder-0.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/nfinder/0.3/noarch/nfinder-0.3-pyhd8ed1ab_0.tar.bz2,conda,0.3,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,nfinder.find,find,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -410,Offset-Subtraction,0.0.5,Offset-Subtraction,A napari plugin in oder to subtract an intensity offset such as autofluorescence,"Marc Boucsein, Robin Koch",BSD-3,https://github.com/MBPhys/Offset-Subtraction,620506c841ba87b014aa52e6,['conda'],,https://github.com/MBPhys/Offset-Subtraction,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/offset-subtraction,http://api.anaconda.org/packages/conda-forge/offset-subtraction,http://anaconda.org/conda-forge/offset-subtraction,['0.0.5'],0.0.5,0.0.5,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.5,conda-forge/offset-subtraction/0.0.5,1.0,0.0,2022-02-10 12:36:21.254000+00:00,2023-06-18 08:40:49.019000+00:00,conda,noarch/offset-subtraction-0.0.5-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7']",noarch,1644496421571.0,None-any-None,pyhd8ed1ab_0,2022-02-10 12:36:22.165000+00:00,a66dbf48c98b63d15f30476abc78f19a,None,9394.0,conda-forge/offset-subtraction/0.0.5/noarch/offset-subtraction-0.0.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/offset-subtraction/0.0.5/noarch/offset-subtraction-0.0.5-pyhd8ed1ab_0.tar.bz2,conda,0.0.5,conda-forge,['main'],public,,0.2.1,Offset-Subtraction.Subtraction,Subtraction,Offset_Subtraction.subtraction:Subtraction,,,,2.1,Offset-Subtraction,0.0.5,['UNKNOWN'],A napari plugin in oder to subtract an intensity offset such as autofluorescence,"# Offset-Subtraction +",text/markdown,https://github.com/santi-rodriguez/nfinder,Santiago N. Rodriguez Alvarez,rodriguezsantiago96@gmail.com,,"['Development Status :: 4 - Beta', 'Programming Language :: Python :: 3.7', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Framework :: napari']",,>=3.7,,,True,0.2,conda-forge/nfinder/0.2,0.3,conda-forge/nfinder/0.3,,,conda,noarch/nfinder-0.2-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['matplotlib-base', 'napari', 'napari-plugin-engine', 'numpy', 'pandas', 'python >=3.7', 'scikit-image', 'scipy']",pyhd8ed1ab_0,1644334270589.0,None-any-None,noarch,2022-02-08 15:33:53.237000+00:00,08ada1ff395294ba0a515877c49dc720,None,101933.0,conda-forge/nfinder/0.2/noarch/nfinder-0.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/nfinder/0.2/noarch/nfinder-0.2-pyhd8ed1ab_0.tar.bz2,conda,0.2,conda-forge,['main'],conda,noarch/nfinder-0.3-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['magicgui', 'matplotlib-base', 'napari', 'napari-plugin-engine', 'numpy', 'pandas', 'python >=3.7', 'scikit-image', 'scipy']",noarch,1644636220406.0,None-any-None,pyhd8ed1ab_0,2022-02-12 03:26:15.779000+00:00,fb4e9428c56fc926fa229889db810a4a,None,102426.0,conda-forge/nfinder/0.3/noarch/nfinder-0.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/nfinder/0.3/noarch/nfinder-0.3-pyhd8ed1ab_0.tar.bz2,conda,0.3,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,nfinder.find,find,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +432,Offset-Subtraction,0.0.5,Offset-Subtraction,A napari plugin in oder to subtract an intensity offset such as autofluorescence,"Marc Boucsein, Robin Koch",BSD-3,https://github.com/MBPhys/Offset-Subtraction,620506c841ba87b014aa52e6,['conda'],,https://github.com/MBPhys/Offset-Subtraction,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/offset-subtraction,http://api.anaconda.org/packages/conda-forge/offset-subtraction,http://anaconda.org/conda-forge/offset-subtraction,['0.0.5'],0.0.5,0.0.5,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.5,conda-forge/offset-subtraction/0.0.5,1.0,0.0,2022-02-10 12:36:21.254000+00:00,2023-06-18 08:40:49.019000+00:00,conda,noarch/offset-subtraction-0.0.5-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7']",noarch,1644496421571.0,None-any-None,pyhd8ed1ab_0,2022-02-10 12:36:22.165000+00:00,a66dbf48c98b63d15f30476abc78f19a,None,9394.0,conda-forge/offset-subtraction/0.0.5/noarch/offset-subtraction-0.0.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/offset-subtraction/0.0.5/noarch/offset-subtraction-0.0.5-pyhd8ed1ab_0.tar.bz2,conda,0.0.5,conda-forge,['main'],public,,0.2.1,Offset-Subtraction.Subtraction,Subtraction,Offset_Subtraction.subtraction:Subtraction,,,,2.1,Offset-Subtraction,0.0.5,['UNKNOWN'],A napari plugin in oder to subtract an intensity offset such as autofluorescence,"# Offset-Subtraction [![License](https://img.shields.io/pypi/l/napari-medical-image-formats.svg?color=green)](https://github.com/MBPhys/Offset-Subtraction/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/Offset-Subtraction.svg?color=green)](https://pypi.org/project/Offset-Subtraction) @@ -41825,8 +44021,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/MBPhys/Offset-Subtraction,"Marc Boucsein, Robin Koch",,BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'dask']",>=3.7,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Offset-Subtraction.Subtraction,Subtraction,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -411,okapi-em,0.0.10,napari okapi-em,napari plugin to deal with charging artifacts in tomography electron microscopy data,Luis Perdigao,Apache-2.0,,642c61fbe4466c6aedaff552,['conda'],,https://pypi.org/project/okapi-em/,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/okapi-em,http://api.anaconda.org/packages/conda-forge/okapi-em,http://anaconda.org/conda-forge/okapi-em,['0.0.4'],0.0.4,0.0.4,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.4,conda-forge/okapi-em/0.0.4,1.0,0.0,2023-04-04 17:44:24.591000+00:00,2023-06-18 17:27:57.295000+00:00,conda,noarch/okapi-em-0.0.4-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['chafer', 'magicgui', 'napari', 'numpy', 'opencv', 'python >=3.7', 'qtpy']",noarch,1680630111167.0,None-any-None,pyhd8ed1ab_0,2023-04-04 17:44:25.116000+00:00,fd871b83718135099d4a5dc26df2bf95,06372b959e0eebed1ba77b3ed09efb577305cfea0fb4734be0efb2c6b39614c2,28829.0,conda-forge/okapi-em/0.0.4/noarch/okapi-em-0.0.4-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/okapi-em/0.0.4/noarch/okapi-em-0.0.4-pyhd8ed1ab_0.conda,conda,0.0.4,conda-forge,['main'],public,,0.2.1,okapi-em.main_qwidget,Okapi-EM Main,okapi_em._widget:MainQWidget,,,,2.1,okapi-em,0.0.10,,napari plugin to deal with charging artifacts in tomography electron microscopy data,"# okapi-em +",text/markdown,https://github.com/MBPhys/Offset-Subtraction,"Marc Boucsein, Robin Koch",,BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'dask']",>=3.7,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Offset-Subtraction.Subtraction,Subtraction,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +433,okapi-em,0.0.10,napari okapi-em,napari plugin to deal with charging artifacts in tomography electron microscopy data,Luis Perdigao,Apache-2.0,,642c61fbe4466c6aedaff552,['conda'],,https://pypi.org/project/okapi-em/,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/okapi-em,http://api.anaconda.org/packages/conda-forge/okapi-em,http://anaconda.org/conda-forge/okapi-em,['0.0.4'],0.0.4,0.0.4,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.4,conda-forge/okapi-em/0.0.4,1.0,0.0,2023-04-04 17:44:24.591000+00:00,2023-06-18 17:27:57.295000+00:00,conda,noarch/okapi-em-0.0.4-pyhd8ed1ab_0.conda,0.0,Apache-2.0,False,python,"['chafer', 'magicgui', 'napari', 'numpy', 'opencv', 'python >=3.7', 'qtpy']",noarch,1680630111167.0,None-any-None,pyhd8ed1ab_0,2023-04-04 17:44:25.116000+00:00,fd871b83718135099d4a5dc26df2bf95,06372b959e0eebed1ba77b3ed09efb577305cfea0fb4734be0efb2c6b39614c2,28829.0,conda-forge/okapi-em/0.0.4/noarch/okapi-em-0.0.4-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/okapi-em/0.0.4/noarch/okapi-em-0.0.4-pyhd8ed1ab_0.conda,conda,0.0.4,conda-forge,['main'],public,,0.2.1,okapi-em.main_qwidget,Okapi-EM Main,okapi_em._widget:MainQWidget,,,,2.1,okapi-em,0.0.10,,napari plugin to deal with charging artifacts in tomography electron microscopy data,"# okapi-em https://github.com/rosalindfranklininstitute/okapi-em @@ -41936,79 +44132,30 @@ If you encounter any problems, please file an issue along with a detailed descri [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,,Luis Perdigao,luis.perdigao@rfi.ac.uk,Apache-2.0,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: Apache Software License']","['numpy', 'magicgui', 'chafer', 'napari[all]', 'opencv-python', 'quoll >=0.0.4', ""imageio-ffmpeg ; extra == 'all'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'""]",>=3.7,,"['all', 'testing']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,okapi-em.main_qwidget,Okapi-EM,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -412,organelle-segmenter-plugin,0.0.5,Infer sub-Cellular Object Npe2 plugin,"A plugin that enables organelle segmentation, forked from tools from Allen Institute for Cell Science",Andy Henrie,BSD-3,https://github.com/ndcn/organelle-segmenter-plugin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,organelle-segmenter-plugin.get_reader,"Read "".czi"" or .tif files",organelle_segmenter_plugin._reader:napari_get_reader,organelle-segmenter-plugin.get_reader,"['*.xyz', '*.czi', '*.tif', '*.tiff']",False,2.1,organelle-segmenter-plugin,0.0.5,,"A plugin that enables organelle segmentation, forked from tools from Allen Institute for Cell Science","# organelle-segmenter-plugin +",text/markdown,,Luis Perdigao,luis.perdigao@rfi.ac.uk,Apache-2.0,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: Apache Software License']","['numpy', 'magicgui', 'chafer', 'napari[all]', 'opencv-python', 'quoll >=0.0.4', ""imageio-ffmpeg ; extra == 'all'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'""]",>=3.7,,"['all', 'testing']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,okapi-em.main_qwidget,Okapi-EM,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +434,organelle-segmenter-plugin,0.0.6,Infer sub-Cellular Object Npe2 plugin,"A plugin that enables organelle segmentation, forked from tools from Allen Institute for Cell Science",Andy Henrie,BSD-3,https://github.com/ndcn/organelle-segmenter-plugin,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,organelle-segmenter-plugin.get_reader,"Read "".czi"" or .tif files",organelle_segmenter_plugin._reader:napari_get_reader,organelle-segmenter-plugin.get_reader,"['*.xyz', '*.czi', '*.tif', '*.tiff']",False,2.1,organelle-segmenter-plugin,0.0.6,,"A plugin that enables organelle segmentation, forked from tools from Allen Institute for Cell Science","# organelle-segmenter-plugin -[![License BSD-3](https://img.shields.io/pypi/l/organelle-segmenter-plugin.svg?color=green)](https://github.com/ergonyc/organelle-segmenter-plugin/raw/main/LICENSE) +[![License BSD-3](https://img.shields.io/pypi/l/organelle-segmenter-plugin.svg?color=green)](https://github.com/ndcn/organelle-segmenter-plugin/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/organelle-segmenter-plugin.svg?color=green)](https://pypi.org/project/organelle-segmenter-plugin) [![Python Version](https://img.shields.io/pypi/pyversions/organelle-segmenter-plugin.svg?color=green)](https://python.org) -[![tests](https://github.com/ergonyc/organelle-segmenter-plugin/workflows/tests/badge.svg)](https://github.com/ergonyc/organelle-segmenter-plugin/actions) -[![codecov](https://codecov.io/gh/ergonyc/organelle-segmenter-plugin/branch/main/graph/badge.svg)](https://codecov.io/gh/ergonyc/organelle-segmenter-plugin) +[![tests](https://github.com/ndcn/organelle-segmenter-plugin/workflows/tests/badge.svg)](https://github.com/ndcn/organelle-segmenter-plugin/actions) +[![codecov](https://codecov.io/gh/ndcn/organelle-segmenter-plugin/branch/main/graph/badge.svg)](https://codecov.io/gh/ndcn/organelle-segmenter-plugin) [![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/organelle-segmenter-plugin)](https://napari-hub.org/plugins/organelle-segmenter-plugin) - 🚧 WIP 🚧 -A plugin that enables image segmentation of organelles from linearly-unmixed florescence images based on the segmenter tools provided by Allen Institute for Cell Science. -A [napari](https://napari.org/stable/) plugin to infer subcellular components leveraging [infer-subc](https://github.com/ergonyc/infer-subc) and [aics-segmenter]( https://allencell.org/segmenter ) +### A [napari](https://napari.org/stable/) plugin implementing [`infer-subc`](https://github.com/ndcn/infer-subc) segmentation workflows. +See [`infer-subc`](https://github.com/ndcn/infer-subc) for more information. -## GOAL -To measure shape, position, size, and interaction of organelles/cellular components (Nuclei (nuc, NU), Nucleus (N1), Lysosomes (LS), Mitochondria (mito, MT), Golgi (GL), Peroxisomes (perox, PO), Endoplasmic Reticulum (ER), Lipid Droplet (LD), Cellmask (soma, cellmask), and cytoplasm (cyto, CT) ) during differentiation of iPSCs, in order to understand the Interactome / Spatiotemporal coordination. - -🚧 WIP 🚧 +# FRAMEWORK, RESOURCES & CONTRIBUTIONS -### Forked from Allen Institute for Cell Science project +## Forked from Allen Institute for Cell Science project The Allen Cell & Structure Segmenter plugin for napari, from which this projects is forked, provides an intuitive graphical user interface to access the powerful segmentation capabilities of an open source 3D segmentation software package developed and maintained by the Allen Institute for Cell Science (classic workflows only with v1.0). ​[The Allen Cell & Structure Segmenter](https://allencell.org/segmenter) is a Python-based open source toolkit developed at the Allen Institute for Cell Science for 3D segmentation of intracellular structures in fluorescence microscope images. This toolkit brings together classic image segmentation and iterative deep learning workflows first to generate initial high-quality 3D intracellular structure segmentations and then to easily curate these results to generate the ground truths for building robust and accurate deep learning models. The toolkit takes advantage of the high replicate 3D live cell image data collected at the Allen Institute for Cell Science of over 30 endogenous fluorescently tagged human induced pluripotent stem cell (hiPSC) lines. Each cell line represents a different intracellular structure with one or more distinct localization patterns within undifferentiated hiPS cells and hiPSC-derived cardiomyocytes. More details about Segmenter can be found at https://allencell.org/segmenter ----------------------------------- - -This [napari] plugin was generated with [Cookiecutter] using with [@napari]'s [cookiecutter-napari-plugin] template. - - - -## Installation 🚧 WIP 🚧 - -### Option 1 (recommended): 🚧 WIP 🚧 -`organelle_segmenter_plugin` is available on `PyPI` via: - -```bash -pip install organelle_segmenter_plugin -``` -### Option 2 🚧 COMING SOON 🚧 (not yet available on napari hub) - -After you installed the lastest version of napari, you can go to ""Plugins"" --> ""Install/Uninstall Package(s)"". Then, you will be able to see all available napari plugins and you can find us by name `organelle-segmenter-plugin`. Just click the ""install"" button to install the Segmenter plugin. - -### Option 3: clone repo + editable install - -```bash -git clone https://github.com/ndcn/organelle-segmenter-plugin.git -cd organelle-segmenter-plugin -pip install -e . -``` -## Quick Start - -In the current version, there are two parts in the plugin: **workflow editor** and **batch processing**. The **workflow editor** allows users adjusting parameters in all the existing workflows in the lookup table, so that the workflow can be optimized on users' data. The adjusted workflow can be saved and then applied to a large batch of files using the **batch processing** part of the plugin. +## Issues -1. Open a file in napari by dragging multi-channel .czi file onto napari which will import a multi-channel, multi-Z 'layer'. (Using the menu's defaults to `aicsIMAGEIO` reader which automatically splits mutliple channels into individual layers. The plugin is able to support multi-dimensional data in .tiff, .tif. ome.tif, .ome.tiff, .czi) -2. Start the plugin (open napari, go to ""Plugins"" --> ""organelle-segmenter-plugin"" --> ""workflow editor"") -3. Select the image and channel to work on -4. Select a workflow based on the example image and target segmentation based on user's data. Ideally, it is recommend to start with the example with very similar morphology as user's data. -5. Click ""Run All"" to execute the whole workflow on the sample data. -6. Adjust the parameters of steps, based on the intermediate results. A complete list of all functions can be found [here](https://github.com/ndcn/infer-subc/blob/main/infer_subc/organelles_config/function_params.md)🚧 WIP 🚧 -7. Click ""Run All"" again after adjusting the parameters and repeat step 6 and 7 until the result is satisfactory. -8. Save the workflow -9. Close the plugin and open the **batch processing** part by (go to ""Plugins"" --> ""organelle-segmenter-plugin"" --> ""batch processing"") -10. Load the customized workflow saved above -11. Load the folder with all the images to process -12. Click ""Run"" -13. Follow the [examples](https://github.com/ndcn/infer-subc/blob/main/notebooks/14_final_workflow.ipynb) in the `infer_subc` [repo](https://github.com/ndcn/infer-subc/) for postprocessing of the saved segmentations and generating the statistics. +If you encounter any problems, please [file an issue] along with a detailed description. ## Contributing @@ -42016,12 +44163,11 @@ Contributions are very welcome. ## License -Distributed under the terms of the [BSD-3] license, -""organelle-segmenter-plugin"" is free and open source software +Distributed under the terms of the [BSD-3] license + +""organelle-segmenter-plugin"" is free and open source software. -## Issues -If you encounter any problems, please [file an issue] along with a detailed description. [napari]: https://github.com/napari/napari [Cookiecutter]: https://github.com/audreyr/cookiecutter @@ -42033,8 +44179,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [napari]: https://github.com/napari/napari [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/ndcn/organelle-segmenter-plugin,Andy Henrie,ergonyc@gmail.com,BSD-3,"['Development Status :: 3 - Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering', 'Topic :: Scientific/Engineering :: Visualization', 'Topic :: Scientific/Engineering :: Information Analysis', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari', 'napari-plugin-engine >=0.1.4', 'aicssegmentation', 'aicsimageio', 'numpy', 'scikit-image', 'aicsimageio >=4.7.0', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/ndcn/organelle-segmenter-plugin/issues', 'Documentation, https://github.com/ndcn/organelle-segmenter-plugin#README.md', 'Source Code, https://github.com/ndcn/organelle-segmenter-plugin', 'User Support, https://github.com/ndcn/organelle-segmenter-plugin/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,organelle-segmenter-plugin.make_batch_widget,Batch processing,organelle_segmenter_plugin._dock_widget:BatchProcessingWidget,organelle-segmenter-plugin.make_workflow_widget,Workflow Editor,organelle_segmenter_plugin._dock_widget:WorkflowEditorWidget,,,,organelle-segmenter-plugin.make_batch_widget,Batch processing,False,organelle-segmenter-plugin.make_workflow_widget,Workflow Editor,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -413,ortho-view-napari,0.1.1,ortho-view-napari,It displays the lateral view of the current 3D stack. This could be a starting point for a orthorviewer.,Jordao Bragantini,BSD-3,https://github.com/JoOkuma/ortho-view-napari,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,ortho-view-napari.Widget,Widget,ortho_view_napari._dock_widget:Widget,,,,2.1,ortho-view-napari,0.1.1,['UNKNOWN'],It displays the lateral view of the current 3D stack. This could be a starting point for a orthorviewer.,"# ortho-view-napari +",text/markdown,https://github.com/ndcn/organelle-segmenter-plugin,Andy Henrie,ergonyc@gmail.com,BSD-3,"['Development Status :: 3 - Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering', 'Topic :: Scientific/Engineering :: Visualization', 'Topic :: Scientific/Engineering :: Information Analysis', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari', 'napari-plugin-engine>=0.1.4', 'aicssegmentation', 'aicsimageio', 'numpy', 'scikit-image', 'aicsimageio>=4.7.0', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.8,"['Bug Tracker, https://github.com/ndcn/organelle-segmenter-plugin/issues', 'Documentation, https://github.com/ndcn/organelle-segmenter-plugin#README.md', 'Source Code, https://github.com/ndcn/organelle-segmenter-plugin', 'User Support, https://github.com/ndcn/organelle-segmenter-plugin/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,organelle-segmenter-plugin.make_batch_widget,Batch processing,organelle_segmenter_plugin._dock_widget:BatchProcessingWidget,organelle-segmenter-plugin.make_workflow_widget,Workflow Editor,organelle_segmenter_plugin._dock_widget:WorkflowEditorWidget,,,,organelle-segmenter-plugin.make_batch_widget,Batch processing,False,organelle-segmenter-plugin.make_workflow_widget,Workflow Editor,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +435,ortho-view-napari,0.1.1,ortho-view-napari,It displays the lateral view of the current 3D stack. This could be a starting point for a orthorviewer.,Jordao Bragantini,BSD-3,https://github.com/JoOkuma/ortho-view-napari,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,ortho-view-napari.Widget,Widget,ortho_view_napari._dock_widget:Widget,,,,2.1,ortho-view-napari,0.1.1,['UNKNOWN'],It displays the lateral view of the current 3D stack. This could be a starting point for a orthorviewer.,"# ortho-view-napari [![License](https://img.shields.io/pypi/l/ortho-view-napari.svg?color=green)](https://github.com/JoOkuma/ortho-view-napari/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/ortho-view-napari.svg?color=green)](https://pypi.org/project/ortho-view-napari) @@ -42093,8 +44239,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/JoOkuma/ortho-view-napari,Jordao Bragantini,jordao.bragantini@czbiohub.org,BSD-3,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy']",>=3.7,"['Bug Tracker, https://github.com/JoOkuma/ortho-view-napari/issues', 'Documentation, https://github.com/JoOkuma/ortho-view-napari#README.md', 'Source Code, https://github.com/JoOkuma/ortho-view-napari', 'User Support, https://github.com/JoOkuma/ortho-view-napari/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ortho-view-napari.Widget,Widget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -414,palmari,0.3.0,Palmari,"Palmari provides a plugin to analyze PALM movies, as well as microscope recordings of other SMLM-based SPT modalities. Set up your pipeline on one file, run it on a folder !",Hippolyte Verdier,"""CeCILL""",https://github.com/hippover/palmari,62c5365ddb466a21da7abfeb,['conda'],,https://github.com/hippover/palmari,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/palmari,http://api.anaconda.org/packages/conda-forge/palmari,http://anaconda.org/conda-forge/palmari,"['0.1.2', '0.2.1', '0.2.3', '0.2.4', '0.2.7', '0.2.8', '0.2.17', '0.2.18', '0.2.21', '0.2.23', '0.2.28', '0.3.0']",0.3.0,0.3.0,['noarch'],14.0,,"['pyhd8ed1ab_0', 'pyhd8ed1ab_1']",0.1.2,conda-forge/palmari/0.1.2,1.0,0.0,2022-07-06 07:14:35.006000+00:00,2023-06-18 08:42:01.974000+00:00,conda,noarch/palmari-0.1.2-pyhd8ed1ab_0.tar.bz2,0.0,LGPL-2.1-only,False,python,"['dask-core >=2022.1.0', 'dask-image >=2021.12.0', 'magicgui', 'matplotlib-base >=3.5', 'napari', 'numpy', 'pandas', 'pyqt', 'python >=3.8', 'qtpy', 'scikit-image >=0.18.3', 'scikit-learn', 'tifffile', 'trackpy 0.5.0']",noarch,1657091542817.0,None-any-None,pyhd8ed1ab_0,2022-07-06 07:14:35.425000+00:00,c27b716e3a14b8f721ed193c0aadd0dd,None,41573.0,conda-forge/palmari/0.1.2/noarch/palmari-0.1.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/palmari/0.1.2/noarch/palmari-0.1.2-pyhd8ed1ab_0.tar.bz2,conda,0.1.2,conda-forge,['main'],public,,0.2.1,palmari.make_qwidget,Analyze file...,palmari._widget:PalmariWidget,,,,2.1,palmari,0.3.0,,"Palmari provides a plugin to analyze PALM movies, as well as microscope recordings of other SMLM-based SPT modalities. Set up your pipeline on one file, run it on a folder !","# Palmari +",text/markdown,https://github.com/JoOkuma/ortho-view-napari,Jordao Bragantini,jordao.bragantini@czbiohub.org,BSD-3,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy']",>=3.7,"['Bug Tracker, https://github.com/JoOkuma/ortho-view-napari/issues', 'Documentation, https://github.com/JoOkuma/ortho-view-napari#README.md', 'Source Code, https://github.com/JoOkuma/ortho-view-napari', 'User Support, https://github.com/JoOkuma/ortho-view-napari/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,ortho-view-napari.Widget,Widget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +436,palmari,0.3.0,Palmari,"Palmari provides a plugin to analyze PALM movies, as well as microscope recordings of other SMLM-based SPT modalities. Set up your pipeline on one file, run it on a folder !",Hippolyte Verdier,"""CeCILL""",https://github.com/hippover/palmari,62c5365ddb466a21da7abfeb,['conda'],,https://github.com/hippover/palmari,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/palmari,http://api.anaconda.org/packages/conda-forge/palmari,http://anaconda.org/conda-forge/palmari,"['0.1.2', '0.2.1', '0.2.3', '0.2.4', '0.2.7', '0.2.8', '0.2.17', '0.2.18', '0.2.21', '0.2.23', '0.2.28', '0.3.0']",0.3.0,0.3.0,['noarch'],14.0,,"['pyhd8ed1ab_0', 'pyhd8ed1ab_1']",0.1.2,conda-forge/palmari/0.1.2,1.0,0.0,2022-07-06 07:14:35.006000+00:00,2023-06-18 08:42:01.974000+00:00,conda,noarch/palmari-0.1.2-pyhd8ed1ab_0.tar.bz2,0.0,LGPL-2.1-only,False,python,"['dask-core >=2022.1.0', 'dask-image >=2021.12.0', 'magicgui', 'matplotlib-base >=3.5', 'napari', 'numpy', 'pandas', 'pyqt', 'python >=3.8', 'qtpy', 'scikit-image >=0.18.3', 'scikit-learn', 'tifffile', 'trackpy 0.5.0']",noarch,1657091542817.0,None-any-None,pyhd8ed1ab_0,2022-07-06 07:14:35.425000+00:00,c27b716e3a14b8f721ed193c0aadd0dd,None,41573.0,conda-forge/palmari/0.1.2/noarch/palmari-0.1.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/palmari/0.1.2/noarch/palmari-0.1.2-pyhd8ed1ab_0.tar.bz2,conda,0.1.2,conda-forge,['main'],public,,0.2.1,palmari.make_qwidget,Analyze file...,palmari._widget:PalmariWidget,,,,2.1,palmari,0.3.0,,"Palmari provides a plugin to analyze PALM movies, as well as microscope recordings of other SMLM-based SPT modalities. Set up your pipeline on one file, run it on a folder !","# Palmari [![Documentation Status](https://readthedocs.org/projects/palmari/badge/?version=latest)](https://palmari.readthedocs.io/en/latest/?badge=latest) [![Python Version](https://img.shields.io/pypi/pyversions/palmari.svg?color=green)](https://python.org) @@ -42165,8 +44311,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ [CeCILL]: http://cecill.info/index.en.html [documentation]: https://palmari.readthedocs.io/en/latest/ -",text/markdown,https://github.com/hippover/palmari,Hippolyte Verdier,hverdier@pasteur.fr,"""CeCILL""","['Development Status :: 4 - Beta', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Environment :: Plugins', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing', 'Operating System :: OS Independent', 'License :: OSI Approved :: CEA CNRS Inria Logiciel Libre License, version 2.1 (CeCILL-2.1)']","['click', 'dask (>=2022.1.0)', 'dask-image (>=2021.12.0)', 'imageio-ffmpeg', 'magicgui (>=0.5.0)', 'matplotlib (>=3.5)', 'munkres', 'napari', 'napari-aicsimageio', 'numpy', 'pandas', 'pyyaml', 'qtpy', 'scikit-image (>=0.18.3)', 'scikit-learn', 'toml', 'tqdm', 'trackpy (>=0.5.0)', ""tox ; extra == 'testing'"", ""PyQt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/hippover/palmari/issues', 'Documentation, https://palmari.readthedocs.io/en/latest/', 'Source Code, https://github.com/hippover/palmari', 'User Support, https://github.com/hippover/palmari/issues']",['testing'],False,0.2.1,conda-forge/palmari/0.2.1,0.2.3,conda-forge/palmari/0.2.3,0.2.4,conda-forge/palmari/0.2.4,conda,noarch/palmari-0.1.2-pyhd8ed1ab_1.tar.bz2,1.0,LGPL-2.1-only,False,python,"['dask-core >=2022.1.0', 'dask-image >=2021.12.0', 'magicgui', 'matplotlib-base >=3.5', 'napari', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image >=0.18.3', 'scikit-learn', 'tifffile', 'trackpy 0.5.0']",pyhd8ed1ab_1,1663232875561.0,None-any-None,noarch,2022-09-15 09:10:02.204000+00:00,51454f61fcd82cb2ebfaf80a3c5839a5,None,41432.0,conda-forge/palmari/0.1.2/noarch/palmari-0.1.2-pyhd8ed1ab_1.tar.bz2,//api.anaconda.org/download/conda-forge/palmari/0.1.2/noarch/palmari-0.1.2-pyhd8ed1ab_1.tar.bz2,conda,0.1.2,conda-forge,['main'],conda,noarch/palmari-0.2.1-pyhd8ed1ab_0.tar.bz2,0.0,LGPL-2.1-only,False,python,"['click', 'dask-core >=2022.1.0', 'dask-image >=2021.12.0', 'imageio-ffmpeg', 'magicgui', 'matplotlib-base >=3.5', 'munkres', 'napari', 'nd2reader', 'numpy', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image >=0.18.3', 'scikit-learn', 'tifffile', 'toml', 'tqdm', 'trackpy >=0.5.0']",noarch,1666558570896.0,None-any-None,pyhd8ed1ab_0,2022-10-23 20:58:39.017000+00:00,bbdbae892ca35843012f764c308dfc3b,None,92721.0,conda-forge/palmari/0.2.1/noarch/palmari-0.2.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/palmari/0.2.1/noarch/palmari-0.2.1-pyhd8ed1ab_0.tar.bz2,conda,0.2.1,conda-forge,['main'],conda,noarch/palmari-0.2.3-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['click', 'dask-core >=2022.1.0', 'dask-image >=2021.12.0', 'imageio-ffmpeg', 'magicgui', 'matplotlib-base >=3.5', 'munkres', 'napari', 'nd2reader', 'numpy', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image >=0.18.3', 'scikit-learn', 'tifffile', 'toml', 'tqdm', 'trackpy >=0.5.0']",LGPL-2.1-only,python,1666559174725.0,2022-10-23 21:08:57.982000+00:00,19a0fe66ae8e27b193c83ee5af75d162,None,92807.0,conda-forge/palmari/0.2.3/noarch/palmari-0.2.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/palmari/0.2.3/noarch/palmari-0.2.3-pyhd8ed1ab_0.tar.bz2,conda,0.2.3,conda-forge,['main'],,palmari.run_pipeline,Run pipeline on folder...,palmari._runner:PipelineRunner,,,,,,,palmari.make_qwidget,Run Palmari on file...,False,palmari.run_pipeline,Run Palmari on folder...,False,,,,,,,,,,,,,,,,,,,,0.2.7,conda-forge/palmari/0.2.7,0.2.8,conda-forge/palmari/0.2.8,0.2.17,conda-forge/palmari/0.2.17,conda,noarch/palmari-0.2.4-pyhd8ed1ab_0.tar.bz2,0.0,LGPL-2.1-only,False,python,"['click', 'dask-core >=2022.1.0', 'dask-image >=2021.12.0', 'imageio-ffmpeg', 'magicgui', 'matplotlib-base >=3.5', 'munkres', 'napari', 'nd2reader', 'numpy', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image >=0.18.3', 'scikit-learn', 'tifffile', 'toml', 'tqdm', 'trackpy >=0.5.0']",noarch,1666560057412.0,None-any-None,pyhd8ed1ab_0,2022-10-23 21:23:33.482000+00:00,ca1ceffaf59355800ca46d9d8811dda9,None,92687.0,conda-forge/palmari/0.2.4/noarch/palmari-0.2.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/palmari/0.2.4/noarch/palmari-0.2.4-pyhd8ed1ab_0.tar.bz2,conda,0.2.4,conda-forge,['main'],conda,noarch/palmari-0.2.7-pyhd8ed1ab_0.tar.bz2,0.0,LGPL-2.1-only,False,python,"['click', 'dask-core >=2022.1.0', 'dask-image >=2021.12.0', 'imageio-ffmpeg', 'magicgui', 'matplotlib-base >=3.5', 'munkres', 'napari', 'nd2reader', 'numpy', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image >=0.18.3', 'scikit-learn', 'tifffile', 'toml', 'tqdm', 'trackpy >=0.5.0']",noarch,1666664125649.0,None-any-None,pyhd8ed1ab_0,2022-10-25 02:17:59.738000+00:00,331b7481b251de5dd0f12a3f498a3320,None,92782.0,conda-forge/palmari/0.2.7/noarch/palmari-0.2.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/palmari/0.2.7/noarch/palmari-0.2.7-pyhd8ed1ab_0.tar.bz2,conda,0.2.7,conda-forge,['main'],conda,noarch/palmari-0.2.8-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['click', 'dask-core >=2022.1.0', 'dask-image >=2021.12.0', 'imageio-ffmpeg', 'magicgui', 'matplotlib-base >=3.5', 'munkres', 'napari', 'nd2reader', 'numpy', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image >=0.18.3', 'scikit-learn', 'tifffile', 'toml', 'tqdm', 'trackpy >=0.5.0']",LGPL-2.1-only,python,1666664628479.0,2022-10-25 02:28:58.272000+00:00,54a5da3175755c56da4b6ac2e99f0db7,None,92631.0,conda-forge/palmari/0.2.8/noarch/palmari-0.2.8-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/palmari/0.2.8/noarch/palmari-0.2.8-pyhd8ed1ab_0.tar.bz2,conda,0.2.8,conda-forge,['main'],,,,,,,0.2.18,conda-forge/palmari/0.2.18,0.2.21,conda-forge/palmari/0.2.21,conda,noarch/palmari-0.2.17-pyhd8ed1ab_0.conda,0.0,LGPL-2.1-only,False,python,"['click', 'dask-core >=2022.1.0', 'dask-image >=2021.12.0', 'imageio-ffmpeg', 'magicgui >=0.5.0', 'matplotlib-base >=3.5', 'munkres', 'napari', 'nd2reader', 'numpy', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image >=0.18.3', 'scikit-learn', 'tifffile', 'toml', 'tqdm', 'trackpy >=0.5.0']",noarch,1674503393099.0,None-any-None,pyhd8ed1ab_0,2023-01-23 19:51:30.527000+00:00,48c7f4be0cbd9647e66c9eee58dc4ef8,7ed9624b2815612c9d8fc3a764120109b2c600d73ff5faf5f6ab3380b38ce0b8,92840.0,conda-forge/palmari/0.2.17/noarch/palmari-0.2.17-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/palmari/0.2.17/noarch/palmari-0.2.17-pyhd8ed1ab_0.conda,conda,0.2.17,conda-forge,['main'],conda,noarch/palmari-0.2.18-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['click', 'dask-core >=2022.1.0', 'dask-image >=2021.12.0', 'imageio-ffmpeg', 'magicgui >=0.5.0', 'matplotlib-base >=3.5', 'munkres', 'napari', 'nd2reader', 'numpy', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image >=0.18.3', 'scikit-learn', 'tifffile', 'toml', 'tqdm', 'trackpy >=0.5.0']",LGPL-2.1-only,python,1674503448939.0,2023-01-23 19:52:18.517000+00:00,3bc16af4bbe56d23a0621cddf9fc47bb,5c9065cdc04bfa72a2b6753ca8da3d651e1afc5bc5e3de658f8cf83a356cb0df,93164.0,conda-forge/palmari/0.2.18/noarch/palmari-0.2.18-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/palmari/0.2.18/noarch/palmari-0.2.18-pyhd8ed1ab_0.conda,conda,0.2.18,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,conda,noarch/palmari-0.2.21-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['click', 'dask-core >=2022.1.0', 'dask-image >=2021.12.0', 'imageio-ffmpeg', 'magicgui >=0.5.0', 'matplotlib-base >=3.5', 'munkres', 'napari', 'nd2reader', 'numpy', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image >=0.18.3', 'scikit-learn', 'tifffile', 'toml', 'tqdm', 'trackpy >=0.5.0']",LGPL-2.1-only,python,1682252795291.0,2023-04-23 12:28:43.334000+00:00,a2fcb9a61beed9aa576dfc5edab570f3,be1cd14bd525f06689ad62294c72f8c96f65886c594583f488ccd427b856a2f0,92739.0,conda-forge/palmari/0.2.21/noarch/palmari-0.2.21-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/palmari/0.2.21/noarch/palmari-0.2.21-pyhd8ed1ab_0.conda,conda,0.2.21,conda-forge,['main'],0.2.23,conda-forge/palmari/0.2.23,conda,noarch/palmari-0.2.23-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['click', 'dask-core >=2022.1.0', 'dask-image >=2021.12.0', 'imageio-ffmpeg', 'magicgui >=0.5.0', 'matplotlib-base >=3.5', 'munkres', 'napari', 'nd2reader', 'numpy', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image >=0.18.3', 'scikit-learn', 'tifffile', 'toml', 'tqdm', 'trackpy >=0.5.0']",LGPL-2.1-only,1682501138336.0,2023-04-26 09:28:03.963000+00:00,9f2e9ed52f93da7ef20237f2846c983c,a224cb6ca9a529f2a781e25a7b09ea9f462909944743fd712cd833149e5f198a,93224.0,conda-forge/palmari/0.2.23/noarch/palmari-0.2.23-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/palmari/0.2.23/noarch/palmari-0.2.23-pyhd8ed1ab_0.conda,conda,0.2.23,conda-forge,['main'],conda,noarch/palmari-0.2.28-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['click', 'dask-core >=2022.1.0', 'dask-image >=2021.12.0', 'imageio-ffmpeg', 'magicgui >=0.5.0', 'matplotlib-base >=3.5', 'munkres', 'napari', 'napari-aicsimageio', 'numpy', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image >=0.18.3', 'scikit-learn', 'toml', 'tqdm', 'trackpy >=0.5.0']",LGPL-2.1-only,1682517512139.0,2023-04-26 14:00:56.801000+00:00,92dccd6d3b9e2b5c70a972e7e694553a,486220178a10979bb1d2a37105ccdb72b6ffa34cde1dcfa55eac29c32369efbd,92756.0,conda-forge/palmari/0.2.28/noarch/palmari-0.2.28-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/palmari/0.2.28/noarch/palmari-0.2.28-pyhd8ed1ab_0.conda,conda,0.2.28,conda-forge,['main'],conda,noarch/palmari-0.3.0-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['click', 'dask-core >=2022.1.0', 'dask-image >=2021.12.0', 'imageio-ffmpeg', 'magicgui >=0.5.0', 'matplotlib-base >=3.5', 'munkres', 'napari', 'napari-aicsimageio', 'numpy', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image >=0.18.3', 'scikit-learn', 'toml', 'tqdm', 'trackpy >=0.5.0']",LGPL-2.1-only,1683013573676.0,2023-05-02 07:49:01.285000+00:00,713b4ee17e93470c0123c514d4b64416,e26e385423a9a4e2f542666fb025eaacae7b434733dc2c1ea5de4b1836c6924d,93063.0,conda-forge/palmari/0.3.0/noarch/palmari-0.3.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/palmari/0.3.0/noarch/palmari-0.3.0-pyhd8ed1ab_0.conda,conda,0.3.0,conda-forge,['main'],,, -415,Partial-Aligner,0.0.1,Partial-Aligner,A napari plugin for manual registration of (a part of) an image,"Marc Boucsein, Robin Koch",BSD-3,https://github.com/DKFZ-TMTRR/Partial-Aligner,61f3df17414b5ba20ea97805,['conda'],,https://github.com/DKFZ-TMTRR/Partial-Aligner,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/partial-aligner,http://api.anaconda.org/packages/conda-forge/partial-aligner,http://anaconda.org/conda-forge/partial-aligner,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/partial-aligner/0.0.1,1.0,0.0,2022-01-28 12:18:29.358000+00:00,2023-06-18 08:40:39.173000+00:00,conda,noarch/partial-aligner-0.0.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core', 'magicgui', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'packaging', 'python >=3.9']",noarch,1643372154866.0,None-any-None,pyhd8ed1ab_0,2022-01-28 12:18:29.841000+00:00,449339ba30b75aa6cd2ce76d3e61963c,None,14442.0,conda-forge/partial-aligner/0.0.1/noarch/partial-aligner-0.0.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/partial-aligner/0.0.1/noarch/partial-aligner-0.0.1-pyhd8ed1ab_0.tar.bz2,conda,0.0.1,conda-forge,['main'],public,,0.2.1,Partial-Aligner.Aligner,Aligner,Partial_Aligner.Aligner_script:Aligner,,,,2.1,Partial-Aligner,0.0.1,['UNKNOWN'],A napari plugin for manual registration of (a part of) an image,"# Partial-Aligner +",text/markdown,https://github.com/hippover/palmari,Hippolyte Verdier,hverdier@pasteur.fr,"""CeCILL""","['Development Status :: 4 - Beta', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Environment :: Plugins', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing', 'Operating System :: OS Independent', 'License :: OSI Approved :: CEA CNRS Inria Logiciel Libre License, version 2.1 (CeCILL-2.1)']","['click', 'dask (>=2022.1.0)', 'dask-image (>=2021.12.0)', 'imageio-ffmpeg', 'magicgui (>=0.5.0)', 'matplotlib (>=3.5)', 'munkres', 'napari', 'napari-aicsimageio', 'numpy', 'pandas', 'pyyaml', 'qtpy', 'scikit-image (>=0.18.3)', 'scikit-learn', 'toml', 'tqdm', 'trackpy (>=0.5.0)', ""tox ; extra == 'testing'"", ""PyQt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/hippover/palmari/issues', 'Documentation, https://palmari.readthedocs.io/en/latest/', 'Source Code, https://github.com/hippover/palmari', 'User Support, https://github.com/hippover/palmari/issues']",['testing'],False,0.2.1,conda-forge/palmari/0.2.1,0.2.3,conda-forge/palmari/0.2.3,0.2.4,conda-forge/palmari/0.2.4,conda,noarch/palmari-0.1.2-pyhd8ed1ab_1.tar.bz2,1.0,LGPL-2.1-only,False,python,"['dask-core >=2022.1.0', 'dask-image >=2021.12.0', 'magicgui', 'matplotlib-base >=3.5', 'napari', 'numpy', 'pandas', 'python >=3.8', 'qtpy', 'scikit-image >=0.18.3', 'scikit-learn', 'tifffile', 'trackpy 0.5.0']",pyhd8ed1ab_1,1663232875561.0,None-any-None,noarch,2022-09-15 09:10:02.204000+00:00,51454f61fcd82cb2ebfaf80a3c5839a5,None,41432.0,conda-forge/palmari/0.1.2/noarch/palmari-0.1.2-pyhd8ed1ab_1.tar.bz2,//api.anaconda.org/download/conda-forge/palmari/0.1.2/noarch/palmari-0.1.2-pyhd8ed1ab_1.tar.bz2,conda,0.1.2,conda-forge,['main'],conda,noarch/palmari-0.2.1-pyhd8ed1ab_0.tar.bz2,0.0,LGPL-2.1-only,False,python,"['click', 'dask-core >=2022.1.0', 'dask-image >=2021.12.0', 'imageio-ffmpeg', 'magicgui', 'matplotlib-base >=3.5', 'munkres', 'napari', 'nd2reader', 'numpy', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image >=0.18.3', 'scikit-learn', 'tifffile', 'toml', 'tqdm', 'trackpy >=0.5.0']",noarch,1666558570896.0,None-any-None,pyhd8ed1ab_0,2022-10-23 20:58:39.017000+00:00,bbdbae892ca35843012f764c308dfc3b,None,92721.0,conda-forge/palmari/0.2.1/noarch/palmari-0.2.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/palmari/0.2.1/noarch/palmari-0.2.1-pyhd8ed1ab_0.tar.bz2,conda,0.2.1,conda-forge,['main'],conda,noarch/palmari-0.2.3-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['click', 'dask-core >=2022.1.0', 'dask-image >=2021.12.0', 'imageio-ffmpeg', 'magicgui', 'matplotlib-base >=3.5', 'munkres', 'napari', 'nd2reader', 'numpy', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image >=0.18.3', 'scikit-learn', 'tifffile', 'toml', 'tqdm', 'trackpy >=0.5.0']",LGPL-2.1-only,python,1666559174725.0,2022-10-23 21:08:57.982000+00:00,19a0fe66ae8e27b193c83ee5af75d162,None,92807.0,conda-forge/palmari/0.2.3/noarch/palmari-0.2.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/palmari/0.2.3/noarch/palmari-0.2.3-pyhd8ed1ab_0.tar.bz2,conda,0.2.3,conda-forge,['main'],,palmari.run_pipeline,Run pipeline on folder...,palmari._runner:PipelineRunner,,,,,,,palmari.make_qwidget,Run Palmari on file...,False,palmari.run_pipeline,Run Palmari on folder...,False,,,,,,,,,,,,,,,,,,,,0.2.7,conda-forge/palmari/0.2.7,0.2.8,conda-forge/palmari/0.2.8,0.2.17,conda-forge/palmari/0.2.17,conda,noarch/palmari-0.2.4-pyhd8ed1ab_0.tar.bz2,0.0,LGPL-2.1-only,False,python,"['click', 'dask-core >=2022.1.0', 'dask-image >=2021.12.0', 'imageio-ffmpeg', 'magicgui', 'matplotlib-base >=3.5', 'munkres', 'napari', 'nd2reader', 'numpy', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image >=0.18.3', 'scikit-learn', 'tifffile', 'toml', 'tqdm', 'trackpy >=0.5.0']",noarch,1666560057412.0,None-any-None,pyhd8ed1ab_0,2022-10-23 21:23:33.482000+00:00,ca1ceffaf59355800ca46d9d8811dda9,None,92687.0,conda-forge/palmari/0.2.4/noarch/palmari-0.2.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/palmari/0.2.4/noarch/palmari-0.2.4-pyhd8ed1ab_0.tar.bz2,conda,0.2.4,conda-forge,['main'],conda,noarch/palmari-0.2.7-pyhd8ed1ab_0.tar.bz2,0.0,LGPL-2.1-only,False,python,"['click', 'dask-core >=2022.1.0', 'dask-image >=2021.12.0', 'imageio-ffmpeg', 'magicgui', 'matplotlib-base >=3.5', 'munkres', 'napari', 'nd2reader', 'numpy', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image >=0.18.3', 'scikit-learn', 'tifffile', 'toml', 'tqdm', 'trackpy >=0.5.0']",noarch,1666664125649.0,None-any-None,pyhd8ed1ab_0,2022-10-25 02:17:59.738000+00:00,331b7481b251de5dd0f12a3f498a3320,None,92782.0,conda-forge/palmari/0.2.7/noarch/palmari-0.2.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/palmari/0.2.7/noarch/palmari-0.2.7-pyhd8ed1ab_0.tar.bz2,conda,0.2.7,conda-forge,['main'],conda,noarch/palmari-0.2.8-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['click', 'dask-core >=2022.1.0', 'dask-image >=2021.12.0', 'imageio-ffmpeg', 'magicgui', 'matplotlib-base >=3.5', 'munkres', 'napari', 'nd2reader', 'numpy', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image >=0.18.3', 'scikit-learn', 'tifffile', 'toml', 'tqdm', 'trackpy >=0.5.0']",LGPL-2.1-only,python,1666664628479.0,2022-10-25 02:28:58.272000+00:00,54a5da3175755c56da4b6ac2e99f0db7,None,92631.0,conda-forge/palmari/0.2.8/noarch/palmari-0.2.8-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/palmari/0.2.8/noarch/palmari-0.2.8-pyhd8ed1ab_0.tar.bz2,conda,0.2.8,conda-forge,['main'],,,,,,,0.2.18,conda-forge/palmari/0.2.18,0.2.21,conda-forge/palmari/0.2.21,conda,noarch/palmari-0.2.17-pyhd8ed1ab_0.conda,0.0,LGPL-2.1-only,False,python,"['click', 'dask-core >=2022.1.0', 'dask-image >=2021.12.0', 'imageio-ffmpeg', 'magicgui >=0.5.0', 'matplotlib-base >=3.5', 'munkres', 'napari', 'nd2reader', 'numpy', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image >=0.18.3', 'scikit-learn', 'tifffile', 'toml', 'tqdm', 'trackpy >=0.5.0']",noarch,1674503393099.0,None-any-None,pyhd8ed1ab_0,2023-01-23 19:51:30.527000+00:00,48c7f4be0cbd9647e66c9eee58dc4ef8,7ed9624b2815612c9d8fc3a764120109b2c600d73ff5faf5f6ab3380b38ce0b8,92840.0,conda-forge/palmari/0.2.17/noarch/palmari-0.2.17-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/palmari/0.2.17/noarch/palmari-0.2.17-pyhd8ed1ab_0.conda,conda,0.2.17,conda-forge,['main'],conda,noarch/palmari-0.2.18-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['click', 'dask-core >=2022.1.0', 'dask-image >=2021.12.0', 'imageio-ffmpeg', 'magicgui >=0.5.0', 'matplotlib-base >=3.5', 'munkres', 'napari', 'nd2reader', 'numpy', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image >=0.18.3', 'scikit-learn', 'tifffile', 'toml', 'tqdm', 'trackpy >=0.5.0']",LGPL-2.1-only,python,1674503448939.0,2023-01-23 19:52:18.517000+00:00,3bc16af4bbe56d23a0621cddf9fc47bb,5c9065cdc04bfa72a2b6753ca8da3d651e1afc5bc5e3de658f8cf83a356cb0df,93164.0,conda-forge/palmari/0.2.18/noarch/palmari-0.2.18-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/palmari/0.2.18/noarch/palmari-0.2.18-pyhd8ed1ab_0.conda,conda,0.2.18,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,conda,noarch/palmari-0.2.21-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['click', 'dask-core >=2022.1.0', 'dask-image >=2021.12.0', 'imageio-ffmpeg', 'magicgui >=0.5.0', 'matplotlib-base >=3.5', 'munkres', 'napari', 'nd2reader', 'numpy', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image >=0.18.3', 'scikit-learn', 'tifffile', 'toml', 'tqdm', 'trackpy >=0.5.0']",LGPL-2.1-only,python,1682252795291.0,2023-04-23 12:28:43.334000+00:00,a2fcb9a61beed9aa576dfc5edab570f3,be1cd14bd525f06689ad62294c72f8c96f65886c594583f488ccd427b856a2f0,92739.0,conda-forge/palmari/0.2.21/noarch/palmari-0.2.21-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/palmari/0.2.21/noarch/palmari-0.2.21-pyhd8ed1ab_0.conda,conda,0.2.21,conda-forge,['main'],conda,noarch/palmari-0.2.23-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['click', 'dask-core >=2022.1.0', 'dask-image >=2021.12.0', 'imageio-ffmpeg', 'magicgui >=0.5.0', 'matplotlib-base >=3.5', 'munkres', 'napari', 'nd2reader', 'numpy', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image >=0.18.3', 'scikit-learn', 'tifffile', 'toml', 'tqdm', 'trackpy >=0.5.0']",LGPL-2.1-only,python,1682501138336.0,2023-04-26 09:28:03.963000+00:00,9f2e9ed52f93da7ef20237f2846c983c,a224cb6ca9a529f2a781e25a7b09ea9f462909944743fd712cd833149e5f198a,93224.0,conda-forge/palmari/0.2.23/noarch/palmari-0.2.23-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/palmari/0.2.23/noarch/palmari-0.2.23-pyhd8ed1ab_0.conda,conda,0.2.23,conda-forge,['main'],0.2.23,conda-forge/palmari/0.2.23,conda,noarch/palmari-0.2.28-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['click', 'dask-core >=2022.1.0', 'dask-image >=2021.12.0', 'imageio-ffmpeg', 'magicgui >=0.5.0', 'matplotlib-base >=3.5', 'munkres', 'napari', 'napari-aicsimageio', 'numpy', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image >=0.18.3', 'scikit-learn', 'toml', 'tqdm', 'trackpy >=0.5.0']",LGPL-2.1-only,1682517512139.0,2023-04-26 14:00:56.801000+00:00,92dccd6d3b9e2b5c70a972e7e694553a,486220178a10979bb1d2a37105ccdb72b6ffa34cde1dcfa55eac29c32369efbd,92756.0,conda-forge/palmari/0.2.28/noarch/palmari-0.2.28-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/palmari/0.2.28/noarch/palmari-0.2.28-pyhd8ed1ab_0.conda,conda,0.2.28,conda-forge,['main'],0.2.28,conda-forge/palmari/0.2.28,conda,noarch/palmari-0.3.0-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['click', 'dask-core >=2022.1.0', 'dask-image >=2021.12.0', 'imageio-ffmpeg', 'magicgui >=0.5.0', 'matplotlib-base >=3.5', 'munkres', 'napari', 'napari-aicsimageio', 'numpy', 'pandas', 'python >=3.8', 'pyyaml', 'qtpy', 'scikit-image >=0.18.3', 'scikit-learn', 'toml', 'tqdm', 'trackpy >=0.5.0']",LGPL-2.1-only,1683013573676.0,2023-05-02 07:49:01.285000+00:00,713b4ee17e93470c0123c514d4b64416,e26e385423a9a4e2f542666fb025eaacae7b434733dc2c1ea5de4b1836c6924d,93063.0,conda-forge/palmari/0.3.0/noarch/palmari-0.3.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/palmari/0.3.0/noarch/palmari-0.3.0-pyhd8ed1ab_0.conda,conda,0.3.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,, +437,Partial-Aligner,0.0.1,Partial-Aligner,A napari plugin for manual registration of (a part of) an image,"Marc Boucsein, Robin Koch",BSD-3,https://github.com/DKFZ-TMTRR/Partial-Aligner,61f3df17414b5ba20ea97805,['conda'],,https://github.com/DKFZ-TMTRR/Partial-Aligner,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/partial-aligner,http://api.anaconda.org/packages/conda-forge/partial-aligner,http://anaconda.org/conda-forge/partial-aligner,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/partial-aligner/0.0.1,1.0,0.0,2022-01-28 12:18:29.358000+00:00,2023-06-18 08:40:39.173000+00:00,conda,noarch/partial-aligner-0.0.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core', 'magicgui', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'packaging', 'python >=3.9']",noarch,1643372154866.0,None-any-None,pyhd8ed1ab_0,2022-01-28 12:18:29.841000+00:00,449339ba30b75aa6cd2ce76d3e61963c,None,14442.0,conda-forge/partial-aligner/0.0.1/noarch/partial-aligner-0.0.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/partial-aligner/0.0.1/noarch/partial-aligner-0.0.1-pyhd8ed1ab_0.tar.bz2,conda,0.0.1,conda-forge,['main'],public,,0.2.1,Partial-Aligner.Aligner,Aligner,Partial_Aligner.Aligner_script:Aligner,,,,2.1,Partial-Aligner,0.0.1,['UNKNOWN'],A napari plugin for manual registration of (a part of) an image,"# Partial-Aligner [![License](https://img.shields.io/pypi/l/napari-medical-image-formats.svg?color=green)](https://github.com/MBPhys/Partial-Aligner/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/Partial-Aligner.svg?color=green)](https://pypi.org/project/Partial-Aligner) @@ -42259,8 +44405,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/DKFZ-TMTRR/Partial-Aligner,"Marc Boucsein, Robin Koch",,BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'packaging', 'dask']",>=3.9,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Partial-Aligner.Aligner,Aligner,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -416,PartSeg,0.15.4,PartSeg,"PartSeg is python GUI and set of napari plugins for bio imaging analysis especially nucleus analysis,",,BSD-3-Clause,,6246e5b68d5f5893643353f5,['conda'],,https://4dnucleome.cent.uw.edu.pl/PartSeg/,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/partseg,http://api.anaconda.org/packages/conda-forge/partseg,http://anaconda.org/conda-forge/partseg,"['0.13.15', '0.14.0', '0.14.1', '0.14.2', '0.14.3', '0.14.4', '0.14.6', '0.15.0', '0.15.1', '0.15.2', '0.15.3', '0.15.4']",0.15.4,0.15.4,"['linux-64', 'noarch', 'osx-64', 'win-64']",77.0,https://github.com/4DNucleome/PartSeg,"['py310h2ec42d9_0', 'py310h2ec42d9_1', 'py310h2ec42d9_2', 'py310h5588dad_0', 'py310h5588dad_1', 'py310h5588dad_2', 'py310hff52083_0', 'py310hff52083_1', 'py310hff52083_2', 'py311h1ea47a8_0', 'py311h1ea47a8_2', 'py311h38be061_0', 'py311h38be061_2', 'py311h6eed73b_0', 'py311h6eed73b_2', 'py37h03978a9_1', 'py37h89c1867_1', 'py37hf985489_1', 'py38h50d1736_0', 'py38h50d1736_1', 'py38h50d1736_2', 'py38h578d9bd_0', 'py38h578d9bd_1', 'py38h578d9bd_2', 'py38haa244fe_0', 'py38haa244fe_1', 'py38haa244fe_2', 'py39h6e9494a_0', 'py39h6e9494a_1', 'py39h6e9494a_2', 'py39hcbf5309_0', 'py39hcbf5309_1', 'py39hcbf5309_2', 'py39hf3d152e_0', 'py39hf3d152e_1', 'py39hf3d152e_2', 'pyhd8ed1ab_0', 'pyhd8ed1ab_1']",0.13.15,conda-forge/partseg/0.13.15,1.0,0.0,2022-04-01 11:44:52.127000+00:00,2024-10-02 06:13:34.926000+00:00,conda,linux-64/partseg-0.13.15-py38h578d9bd_0.tar.bz2,0.0,BSD-3-Clause,True,,"['appdirs >=1.4.4', 'czifile >=2019.5.22', 'defusedxml >=0.6.0', 'h5py >=2.8.0', 'imagecodecs >=2020.5.30', 'imageio >=2.5.0', 'magicgui >=0.3.3', 'mahotas >=1.4.9', 'napari >=0.4.8', 'numpy >=1.18.0', 'oiffile >=2019.1.1', 'openpyxl >=2.4.9', 'packaging >=20.0', 'pandas >=0.24.0', 'partsegcore-compiled-backend >=0.13.11', 'partsegdata 0.10.0', 'psygnal >=0.2.0', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'qtawesome >=1.0.3', 'qtpy >=1.7.0', 'requests >=2.18.0', 'scipy >=1.2.0', 'sentry-sdk >=0.14.3', 'simpleitk >=1.1.0', 'six >=1.11.0', 'superqt >=0.2.4', 'sympy >=1.1.1', 'tifffile >=2020.9.30', 'vispy >=0.6.4', 'xlrd >=1.1.0', 'xlsxwriter']",linux-64,1648813018853.0,x86_64-any-linux,py38h578d9bd_0,2022-04-01 11:44:52.751000+00:00,eb0fe7a9415808a7670768e8c4183390,None,575385.0,conda-forge/partseg/0.13.15/linux-64/partseg-0.13.15-py38h578d9bd_0.tar.bz2,//api.anaconda.org/download/conda-forge/partseg/0.13.15/linux-64/partseg-0.13.15-py38h578d9bd_0.tar.bz2,conda,0.13.15,conda-forge,['main'],public,,0.1.0,PartSeg.load_roi_project,Get PartSeg ROI project Reader,PartSegCore.napari_plugins.load_roi_project:napari_get_reader,PartSeg.load_roi_project,"['*.tgz', '*.tbz2', '*.gz', '*.bz2']",False,2.1,PartSeg,0.15.4,"['Linux', 'Windows', 'MacOs']","PartSeg is python GUI and set of napari plugins for bio imaging analysis especially nucleus analysis,","# PartSeg +",text/markdown,https://github.com/DKFZ-TMTRR/Partial-Aligner,"Marc Boucsein, Robin Koch",,BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'packaging', 'dask']",>=3.9,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,Partial-Aligner.Aligner,Aligner,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +438,PartSeg,0.15.4,PartSeg,"PartSeg is python GUI and set of napari plugins for bio imaging analysis especially nucleus analysis,",,BSD-3-Clause,,6246e5b68d5f5893643353f5,['conda'],,https://4dnucleome.cent.uw.edu.pl/PartSeg/,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/partseg,http://api.anaconda.org/packages/conda-forge/partseg,http://anaconda.org/conda-forge/partseg,"['0.13.15', '0.14.0', '0.14.1', '0.14.2', '0.14.3', '0.14.4', '0.14.6', '0.15.0', '0.15.1', '0.15.2', '0.15.3', '0.15.4', '0.16.0']",0.16.0,0.16.0,"['linux-64', 'noarch', 'osx-64', 'win-64']",81.0,https://github.com/4DNucleome/PartSeg,"['py310h2ec42d9_0', 'py310h2ec42d9_1', 'py310h2ec42d9_2', 'py310h5588dad_0', 'py310h5588dad_1', 'py310h5588dad_2', 'py310hff52083_0', 'py310hff52083_1', 'py310hff52083_2', 'py311h1ea47a8_0', 'py311h1ea47a8_2', 'py311h38be061_0', 'py311h38be061_2', 'py311h6eed73b_0', 'py311h6eed73b_2', 'py37h03978a9_1', 'py37h89c1867_1', 'py37hf985489_1', 'py38h50d1736_0', 'py38h50d1736_1', 'py38h50d1736_2', 'py38h578d9bd_0', 'py38h578d9bd_1', 'py38h578d9bd_2', 'py38haa244fe_0', 'py38haa244fe_1', 'py38haa244fe_2', 'py39h6e9494a_0', 'py39h6e9494a_1', 'py39h6e9494a_2', 'py39hcbf5309_0', 'py39hcbf5309_1', 'py39hcbf5309_2', 'py39hf3d152e_0', 'py39hf3d152e_1', 'py39hf3d152e_2', 'pyhd8ed1ab_0', 'pyhd8ed1ab_1']",0.13.15,conda-forge/partseg/0.13.15,1.0,0.0,2022-04-01 11:44:52.127000+00:00,2024-12-24 11:44:22.637000+00:00,conda,linux-64/partseg-0.13.15-py38h578d9bd_0.tar.bz2,0.0,BSD-3-Clause,True,,"['appdirs >=1.4.4', 'czifile >=2019.5.22', 'defusedxml >=0.6.0', 'h5py >=2.8.0', 'imagecodecs >=2020.5.30', 'imageio >=2.5.0', 'magicgui >=0.3.3', 'mahotas >=1.4.9', 'napari >=0.4.8', 'numpy >=1.18.0', 'oiffile >=2019.1.1', 'openpyxl >=2.4.9', 'packaging >=20.0', 'pandas >=0.24.0', 'partsegcore-compiled-backend >=0.13.11', 'partsegdata 0.10.0', 'psygnal >=0.2.0', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'qtawesome >=1.0.3', 'qtpy >=1.7.0', 'requests >=2.18.0', 'scipy >=1.2.0', 'sentry-sdk >=0.14.3', 'simpleitk >=1.1.0', 'six >=1.11.0', 'superqt >=0.2.4', 'sympy >=1.1.1', 'tifffile >=2020.9.30', 'vispy >=0.6.4', 'xlrd >=1.1.0', 'xlsxwriter']",linux-64,1648813018853.0,x86_64-any-linux,py38h578d9bd_0,2022-04-01 11:44:52.751000+00:00,eb0fe7a9415808a7670768e8c4183390,None,575385.0,conda-forge/partseg/0.13.15/linux-64/partseg-0.13.15-py38h578d9bd_0.tar.bz2,//api.anaconda.org/download/conda-forge/partseg/0.13.15/linux-64/partseg-0.13.15-py38h578d9bd_0.tar.bz2,conda,0.13.15,conda-forge,['main'],public,,0.1.0,PartSeg.load_roi_project,Get PartSeg ROI project Reader,PartSegCore.napari_plugins.load_roi_project:napari_get_reader,PartSeg.load_roi_project,"['*.tgz', '*.tbz2', '*.gz', '*.bz2']",False,2.1,PartSeg,0.15.4,"['Linux', 'Windows', 'MacOs']","PartSeg is python GUI and set of napari plugins for bio imaging analysis especially nucleus analysis,","# PartSeg ![Contributions](https://img.shields.io/badge/Contributions-Welcome-brightgreen.svg) ![Tests](https://github.com/4DNucleome/PartSeg/workflows/Tests/badge.svg?branch=develop) @@ -43354,8 +45500,8 @@ All notable changes to this project will be documented in this file. ### 0.9 Begin of changelog -",text/markdown,,,Grzegorz Bokota ,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Framework :: napari', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Programming Language :: Python :: Implementation :: CPython', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Visualization']","['IPython >=7.7.0', 'PartSegCore-compiled-backend <0.16.0,>=0.13.11', 'PartSegData ==0.10.0', 'QtAwesome !=1.2.0,>=1.0.3', 'QtPy >=1.10.0', 'SimpleITK >=2.0.0', 'appdirs >=1.4.4', 'czifile >=2019.5.22', 'defusedxml >=0.6.0', 'fonticon-fontawesome6 >=6.1.1', 'h5py >=3.3.0', 'imagecodecs >=2020.5.30', 'imageio >=2.5.0', 'ipykernel >=5.2.0', 'local-migrator >=0.1.7', 'magicgui !=0.5.0,>=0.4.0', 'mahotas >=1.4.10', 'napari >=0.4.14', 'nme >=0.1.7', 'oiffile >=2020.1.18', 'openpyxl >=2.5.7', 'packaging >=20.0', 'pandas >=1.1.0', 'psygnal >=0.3.1', 'pydantic <3,>=1.9.1', 'pygments >=2.12.0', 'qtconsole >=4.7.7', 'requests >=2.25.0', 'scipy >=1.4.1', 'sentry-sdk >=2.4.0', 'six >=1.11.0', 'superqt >=0.3.0', 'sympy >=1.1.1', 'tifffile >=2020.9.30', 'traceback-with-variables >=2.0.4', 'vispy >=0.9.4', 'xlrd >=1.1.0', 'xlsxwriter >=2.0.0', 'numpy <2,>=1.18.5 ; python_version < ""3.10""', 'numpy >=1.18.5 ; python_version >= ""3.10""', ""PartSeg[accelerate,pyqt5] ; extra == 'all'"", ""autodoc-pydantic ; extra == 'docs'"", ""sphinx !=3.0.0,!=3.5.0 ; extra == 'docs'"", ""sphinx-autodoc-typehints ; extra == 'docs'"", ""sphinx-qt-documentation ; extra == 'docs'"", ""PartSeg[pyinstaller_base,pyqt5] ; extra == 'pyinstaller'"", ""PartSeg[accelerate] ; extra == 'pyinstaller_base'"", ""PyInstaller ; extra == 'pyinstaller_base'"", ""pydantic ; extra == 'pyinstaller_base'"", ""PartSeg[pyqt5] ; extra == 'pyqt'"", ""PyQt5 !=5.15.0,>=5.12.3 ; extra == 'pyqt5'"", ""napari[pyqt5] ; extra == 'pyqt5'"", ""PyQt6 ; extra == 'pyqt6'"", 'napari[pyqt6] >=0.5.0 ; (python_version >= ""3.9"") and extra == \'pyqt6\'', ""PartSeg[pyside2] ; extra == 'pyside'"", ""PySide2 !=5.15.0,>=5.12.3 ; extra == 'pyside2'"", ""napari[pyside] ; extra == 'pyside2'"", ""PySide6 ; extra == 'pyside6'"", 'napari[pyside6_experimental] >=0.5.0 ; (python_version >= ""3.9"") and extra == \'pyside6\'', ""coverage ; extra == 'test'"", ""lxml[html_clean] ; extra == 'test'"", ""pytest >=7.0.0 ; extra == 'test'"", ""pytest-qt ; extra == 'test'"", ""pytest-timeout ; extra == 'test'"", ""scikit-image ; extra == 'test'"", ""pytest ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""lxml ; extra == 'testing'""]",>=3.8,"['Homepage, https://partseg.github.io/', 'Documentation, https://partseg.readthedocs.io/en/stable/', 'Source Code, https://github.com/4DNucleome/PartSeg', 'User Support, https://github.com/4DNucleome/PartSeg/issues', 'Bug Tracker, https://github.com/4DNucleome/PartSeg/issues']","['accelerate', 'all', 'docs', 'pyinstaller', 'pyinstaller_base', 'pyqt', 'pyqt5', 'pyqt6', 'pyside', 'pyside2', 'pyside6', 'test', 'testing']",False,0.14.0,conda-forge/partseg/0.14.0,0.14.1,conda-forge/partseg/0.14.1,0.14.2,conda-forge/partseg/0.14.2,conda,osx-64/partseg-0.13.15-py39h6e9494a_0.tar.bz2,0.0,BSD-3-Clause,True,,"['appdirs >=1.4.4', 'czifile >=2019.5.22', 'defusedxml >=0.6.0', 'h5py >=2.8.0', 'imagecodecs >=2020.5.30', 'imageio >=2.5.0', 'magicgui >=0.3.3', 'mahotas >=1.4.9', 'napari >=0.4.8', 'numpy >=1.18.0', 'oiffile >=2019.1.1', 'openpyxl >=2.4.9', 'packaging >=20.0', 'pandas >=0.24.0', 'partsegcore-compiled-backend >=0.13.11', 'partsegdata 0.10.0', 'psygnal >=0.2.0', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'qtawesome >=1.0.3', 'qtpy >=1.7.0', 'requests >=2.18.0', 'scipy >=1.2.0', 'sentry-sdk >=0.14.3', 'simpleitk >=1.1.0', 'six >=1.11.0', 'superqt >=0.2.4', 'sympy >=1.1.1', 'tifffile >=2020.9.30', 'vispy >=0.6.4', 'xlrd >=1.1.0', 'xlsxwriter']",py39h6e9494a_0,1648813281824.0,x86_64-any-darwin,osx-64,2022-04-01 11:46:04.318000+00:00,331e2ba409b76aca7dc025b607b7f3f5,None,571207.0,conda-forge/partseg/0.13.15/osx-64/partseg-0.13.15-py39h6e9494a_0.tar.bz2,//api.anaconda.org/download/conda-forge/partseg/0.13.15/osx-64/partseg-0.13.15-py39h6e9494a_0.tar.bz2,conda,0.13.15,conda-forge,['main'],conda,osx-64/partseg-0.13.15-py38h50d1736_0.tar.bz2,0.0,BSD-3-Clause,True,,"['appdirs >=1.4.4', 'czifile >=2019.5.22', 'defusedxml >=0.6.0', 'h5py >=2.8.0', 'imagecodecs >=2020.5.30', 'imageio >=2.5.0', 'magicgui >=0.3.3', 'mahotas >=1.4.9', 'napari >=0.4.8', 'numpy >=1.18.0', 'oiffile >=2019.1.1', 'openpyxl >=2.4.9', 'packaging >=20.0', 'pandas >=0.24.0', 'partsegcore-compiled-backend >=0.13.11', 'partsegdata 0.10.0', 'psygnal >=0.2.0', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'qtawesome >=1.0.3', 'qtpy >=1.7.0', 'requests >=2.18.0', 'scipy >=1.2.0', 'sentry-sdk >=0.14.3', 'simpleitk >=1.1.0', 'six >=1.11.0', 'superqt >=0.2.4', 'sympy >=1.1.1', 'tifffile >=2020.9.30', 'vispy >=0.6.4', 'xlrd >=1.1.0', 'xlsxwriter']",osx-64,1648813345109.0,x86_64-any-darwin,py38h50d1736_0,2022-04-01 11:47:43.700000+00:00,853ac64337944edf84f9250252d37c0f,None,571108.0,conda-forge/partseg/0.13.15/osx-64/partseg-0.13.15-py38h50d1736_0.tar.bz2,//api.anaconda.org/download/conda-forge/partseg/0.13.15/osx-64/partseg-0.13.15-py38h50d1736_0.tar.bz2,conda,0.13.15,conda-forge,['main'],conda,linux-64/partseg-0.13.15-py39hf3d152e_0.tar.bz2,x86_64-any-linux,True,linux-64,py39hf3d152e_0,0.0,"['appdirs >=1.4.4', 'czifile >=2019.5.22', 'defusedxml >=0.6.0', 'h5py >=2.8.0', 'imagecodecs >=2020.5.30', 'imageio >=2.5.0', 'magicgui >=0.3.3', 'mahotas >=1.4.9', 'napari >=0.4.8', 'numpy >=1.18.0', 'oiffile >=2019.1.1', 'openpyxl >=2.4.9', 'packaging >=20.0', 'pandas >=0.24.0', 'partsegcore-compiled-backend >=0.13.11', 'partsegdata 0.10.0', 'psygnal >=0.2.0', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'qtawesome >=1.0.3', 'qtpy >=1.7.0', 'requests >=2.18.0', 'scipy >=1.2.0', 'sentry-sdk >=0.14.3', 'simpleitk >=1.1.0', 'six >=1.11.0', 'superqt >=0.2.4', 'sympy >=1.1.1', 'tifffile >=2020.9.30', 'vispy >=0.6.4', 'xlrd >=1.1.0', 'xlsxwriter']",BSD-3-Clause,,1648813400987.0,2022-04-01 11:47:59.287000+00:00,0adb8cdb15e686843f7084601ce1e69e,None,568272.0,conda-forge/partseg/0.13.15/linux-64/partseg-0.13.15-py39hf3d152e_0.tar.bz2,//api.anaconda.org/download/conda-forge/partseg/0.13.15/linux-64/partseg-0.13.15-py39hf3d152e_0.tar.bz2,conda,0.13.15,conda-forge,['main'],,PartSeg.load_image,Get Image Reader,PartSegCore.napari_plugins.load_image:napari_get_reader,PartSeg.write_tiff_image,Write tiff Image,PartSegCore.napari_plugins.save_tiff_layer:napari_write_images,PartSeg.write_tiff_labels,Write tiff Labels,PartSegCore.napari_plugins.save_tiff_layer:napari_write_labels,PartSeg.SearchLabel,Search Label,False,PartSeg.Measurement,Measurement,False,PartSeg.SimpleMeasurement,Simple Measurement,False,PartSeg.ROIAnalysisExtraction,ROI Analysis Extraction,False,PartSeg.load_mask_project,Get PartSeg mask project Reader,PartSegCore.napari_plugins.load_mask_project:napari_get_reader,PartSeg.write_tiff_image,['image+'],Image as tiff,PartSeg.write_tiff_labels,['labels'],"['.tif', '.tiff']",Labels as tiff,,,,0.14.3,conda-forge/partseg/0.14.3,0.14.4,conda-forge/partseg/0.14.4,0.14.6,conda-forge/partseg/0.14.6,conda,win-64/partseg-0.13.15-py38haa244fe_0.tar.bz2,0.0,BSD-3-Clause,False,,"['appdirs >=1.4.4', 'czifile >=2019.5.22', 'defusedxml >=0.6.0', 'h5py >=2.8.0', 'imagecodecs >=2020.5.30', 'imageio >=2.5.0', 'magicgui >=0.3.3', 'mahotas >=1.4.9', 'napari >=0.4.8', 'numpy >=1.18.0', 'oiffile >=2019.1.1', 'openpyxl >=2.4.9', 'packaging >=20.0', 'pandas >=0.24.0', 'partsegcore-compiled-backend >=0.13.11', 'partsegdata 0.10.0', 'psygnal >=0.2.0', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'qtawesome >=1.0.3', 'qtpy >=1.7.0', 'requests >=2.18.0', 'scipy >=1.2.0', 'sentry-sdk >=0.14.3', 'simpleitk >=1.1.0', 'six >=1.11.0', 'superqt >=0.2.4', 'sympy >=1.1.1', 'tifffile >=2020.9.30', 'vispy >=0.6.4', 'xlrd >=1.1.0', 'xlsxwriter']",win-64,1648813562562.0,x86_64-any-win32,py38haa244fe_0,2022-04-01 11:55:22.132000+00:00,a6b086dbfccd563c80f1cf659525409f,None,648352.0,conda-forge/partseg/0.13.15/win-64/partseg-0.13.15-py38haa244fe_0.tar.bz2,//api.anaconda.org/download/conda-forge/partseg/0.13.15/win-64/partseg-0.13.15-py38haa244fe_0.tar.bz2,conda,0.13.15,conda-forge,['main'],conda,win-64/partseg-0.13.15-py39hcbf5309_0.tar.bz2,0.0,BSD-3-Clause,False,,"['appdirs >=1.4.4', 'czifile >=2019.5.22', 'defusedxml >=0.6.0', 'h5py >=2.8.0', 'imagecodecs >=2020.5.30', 'imageio >=2.5.0', 'magicgui >=0.3.3', 'mahotas >=1.4.9', 'napari >=0.4.8', 'numpy >=1.18.0', 'oiffile >=2019.1.1', 'openpyxl >=2.4.9', 'packaging >=20.0', 'pandas >=0.24.0', 'partsegcore-compiled-backend >=0.13.11', 'partsegdata 0.10.0', 'psygnal >=0.2.0', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'qtawesome >=1.0.3', 'qtpy >=1.7.0', 'requests >=2.18.0', 'scipy >=1.2.0', 'sentry-sdk >=0.14.3', 'simpleitk >=1.1.0', 'six >=1.11.0', 'superqt >=0.2.4', 'sympy >=1.1.1', 'tifffile >=2020.9.30', 'vispy >=0.6.4', 'xlrd >=1.1.0', 'xlsxwriter']",win-64,1648813581568.0,x86_64-any-win32,py39hcbf5309_0,2022-04-01 11:55:50.671000+00:00,f2f8ea650db0088de92b38ac571039fe,None,640284.0,conda-forge/partseg/0.13.15/win-64/partseg-0.13.15-py39hcbf5309_0.tar.bz2,//api.anaconda.org/download/conda-forge/partseg/0.13.15/win-64/partseg-0.13.15-py39hcbf5309_0.tar.bz2,conda,0.13.15,conda-forge,['main'],conda,osx-64/partseg-0.14.0-py38h50d1736_0.tar.bz2,x86_64-any-darwin,True,osx-64,py38h50d1736_0,0.0,"['appdirs >=1.4.4', 'czifile >=2019.5.22', 'defusedxml >=0.6.0', 'h5py >=2.8.0', 'imagecodecs >=2020.5.30', 'imageio >=2.5.0', 'magicgui >=0.3.3', 'mahotas >=1.4.9', 'napari >=0.4.8', 'nme >=0.1.4', 'numpy >=1.18.0', 'oiffile >=2019.1.1', 'openpyxl >=2.4.9', 'packaging >=20.0', 'pandas >=0.24.0', 'partsegcore-compiled-backend >=0.13.11', 'partsegdata 0.10.0', 'psygnal >=0.2.0', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'qtawesome >=1.0.3', 'qtpy >=1.7.0', 'requests >=2.18.0', 'scipy >=1.2.0', 'sentry-sdk >=0.14.3', 'simpleitk >=1.1.0', 'six >=1.11.0', 'superqt >=0.2.4', 'sympy >=1.1.1', 'tifffile >=2020.9.30', 'traceback-with-variables >=2.0.4', 'vispy >=0.6.4', 'xlrd >=1.1.0', 'xlsxwriter']",BSD-3-Clause,,1650054524754.0,2022-04-15 20:33:53.991000+00:00,28d585199ef7edb0b7c4b77f51a2c264,None,589661.0,conda-forge/partseg/0.14.0/osx-64/partseg-0.14.0-py38h50d1736_0.tar.bz2,//api.anaconda.org/download/conda-forge/partseg/0.14.0/osx-64/partseg-0.14.0-py38h50d1736_0.tar.bz2,conda,0.14.0,conda-forge,['main'],,,,PartSeg.save_mask_roi,Write Labels as mask project,PartSegCore.napari_plugins.save_mask_roi:napari_write_labels,0.15.0,conda-forge/partseg/0.15.0,0.15.1,conda-forge/partseg/0.15.1,conda,linux-64/partseg-0.14.0-py39hf3d152e_0.tar.bz2,0.0,BSD-3-Clause,True,,"['appdirs >=1.4.4', 'czifile >=2019.5.22', 'defusedxml >=0.6.0', 'h5py >=2.8.0', 'imagecodecs >=2020.5.30', 'imageio >=2.5.0', 'magicgui >=0.3.3', 'mahotas >=1.4.9', 'napari >=0.4.8', 'nme >=0.1.4', 'numpy >=1.18.0', 'oiffile >=2019.1.1', 'openpyxl >=2.4.9', 'packaging >=20.0', 'pandas >=0.24.0', 'partsegcore-compiled-backend >=0.13.11', 'partsegdata 0.10.0', 'psygnal >=0.2.0', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'qtawesome >=1.0.3', 'qtpy >=1.7.0', 'requests >=2.18.0', 'scipy >=1.2.0', 'sentry-sdk >=0.14.3', 'simpleitk >=1.1.0', 'six >=1.11.0', 'superqt >=0.2.4', 'sympy >=1.1.1', 'tifffile >=2020.9.30', 'traceback-with-variables >=2.0.4', 'vispy >=0.6.4', 'xlrd >=1.1.0', 'xlsxwriter']",linux-64,1650054619741.0,x86_64-any-linux,py39hf3d152e_0,2022-04-15 20:34:33.433000+00:00,e1507d99f95c302677d8cb9f59d4850f,None,587180.0,conda-forge/partseg/0.14.0/linux-64/partseg-0.14.0-py39hf3d152e_0.tar.bz2,//api.anaconda.org/download/conda-forge/partseg/0.14.0/linux-64/partseg-0.14.0-py39hf3d152e_0.tar.bz2,conda,0.14.0,conda-forge,['main'],conda,osx-64/partseg-0.14.0-py39h6e9494a_0.tar.bz2,x86_64-any-darwin,True,osx-64,py39h6e9494a_0,0.0,"['appdirs >=1.4.4', 'czifile >=2019.5.22', 'defusedxml >=0.6.0', 'h5py >=2.8.0', 'imagecodecs >=2020.5.30', 'imageio >=2.5.0', 'magicgui >=0.3.3', 'mahotas >=1.4.9', 'napari >=0.4.8', 'nme >=0.1.4', 'numpy >=1.18.0', 'oiffile >=2019.1.1', 'openpyxl >=2.4.9', 'packaging >=20.0', 'pandas >=0.24.0', 'partsegcore-compiled-backend >=0.13.11', 'partsegdata 0.10.0', 'psygnal >=0.2.0', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'qtawesome >=1.0.3', 'qtpy >=1.7.0', 'requests >=2.18.0', 'scipy >=1.2.0', 'sentry-sdk >=0.14.3', 'simpleitk >=1.1.0', 'six >=1.11.0', 'superqt >=0.2.4', 'sympy >=1.1.1', 'tifffile >=2020.9.30', 'traceback-with-variables >=2.0.4', 'vispy >=0.6.4', 'xlrd >=1.1.0', 'xlsxwriter']",BSD-3-Clause,,1650054576930.0,2022-04-15 20:35:50.055000+00:00,453f57720349b7aa72b78c446c8f87e8,None,585327.0,conda-forge/partseg/0.14.0/osx-64/partseg-0.14.0-py39h6e9494a_0.tar.bz2,//api.anaconda.org/download/conda-forge/partseg/0.14.0/osx-64/partseg-0.14.0-py39h6e9494a_0.tar.bz2,conda,0.14.0,conda-forge,['main'],PartSeg.load_masked_image,Get Reader for image with mask,PartSegCore.napari_plugins.load_masked_image:napari_get_reader,PartSeg.SimpleMeasurement,Create Simple Measurement,PartSeg.plugins.napari_widgets.simple_measurement_widget:SimpleMeasurement,PartSeg.ROIAnalysisExtraction,Create ROI Analysis Extraction,PartSeg.plugins.napari_widgets:ROIAnalysisExtraction,PartSeg.DoubleThreshold,Create Double Threshold,PartSeg.plugins.napari_widgets:DoubleThreshold,PartSeg.NoiseFilter,Create Noise Filter,PartSeg.plugins.napari_widgets:NoiseFilter,PartSeg.BorderSmooth,Create Border Smooth,PartSeg.plugins.napari_widgets:BorderSmooth,"['.tif', '.tiff']",PartSeg.ROIMaskExtraction,ROI Mask Extraction,False,PartSeg.MaskCreate,Mask Create,False,PartSeg.PartSegGUILauncher,PartSeg GUI Launcher,False,PartSeg.ImageColormap,Image Colormap,False,conda,linux-64/partseg-0.14.0-py38h578d9bd_0.tar.bz2,x86_64-any-linux,True,linux-64,py38h578d9bd_0,0.0,"['appdirs >=1.4.4', 'czifile >=2019.5.22', 'defusedxml >=0.6.0', 'h5py >=2.8.0', 'imagecodecs >=2020.5.30', 'imageio >=2.5.0', 'magicgui >=0.3.3', 'mahotas >=1.4.9', 'napari >=0.4.8', 'nme >=0.1.4', 'numpy >=1.18.0', 'oiffile >=2019.1.1', 'openpyxl >=2.4.9', 'packaging >=20.0', 'pandas >=0.24.0', 'partsegcore-compiled-backend >=0.13.11', 'partsegdata 0.10.0', 'psygnal >=0.2.0', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'qtawesome >=1.0.3', 'qtpy >=1.7.0', 'requests >=2.18.0', 'scipy >=1.2.0', 'sentry-sdk >=0.14.3', 'simpleitk >=1.1.0', 'six >=1.11.0', 'superqt >=0.2.4', 'sympy >=1.1.1', 'tifffile >=2020.9.30', 'traceback-with-variables >=2.0.4', 'vispy >=0.6.4', 'xlrd >=1.1.0', 'xlsxwriter']",BSD-3-Clause,,1650054502692.0,2022-04-15 20:36:42.458000+00:00,5f6e20339b9a91f3b993328ddb24dd5b,None,593362.0,conda-forge/partseg/0.14.0/linux-64/partseg-0.14.0-py38h578d9bd_0.tar.bz2,//api.anaconda.org/download/conda-forge/partseg/0.14.0/linux-64/partseg-0.14.0-py38h578d9bd_0.tar.bz2,conda,0.14.0,conda-forge,['main'],0.15.2,conda-forge/partseg/0.15.2,conda,win-64/partseg-0.14.0-py39hcbf5309_0.tar.bz2,x86_64-any-win32,False,win-64,py39hcbf5309_0,0.0,"['appdirs >=1.4.4', 'czifile >=2019.5.22', 'defusedxml >=0.6.0', 'h5py >=2.8.0', 'imagecodecs >=2020.5.30', 'imageio >=2.5.0', 'magicgui >=0.3.3', 'mahotas >=1.4.9', 'napari >=0.4.8', 'nme >=0.1.4', 'numpy >=1.18.0', 'oiffile >=2019.1.1', 'openpyxl >=2.4.9', 'packaging >=20.0', 'pandas >=0.24.0', 'partsegcore-compiled-backend >=0.13.11', 'partsegdata 0.10.0', 'psygnal >=0.2.0', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'qtawesome >=1.0.3', 'qtpy >=1.7.0', 'requests >=2.18.0', 'scipy >=1.2.0', 'sentry-sdk >=0.14.3', 'simpleitk >=1.1.0', 'six >=1.11.0', 'superqt >=0.2.4', 'sympy >=1.1.1', 'tifffile >=2020.9.30', 'traceback-with-variables >=2.0.4', 'vispy >=0.6.4', 'xlrd >=1.1.0', 'xlsxwriter']",BSD-3-Clause,1650055115181.0,2022-04-15 20:48:11.085000+00:00,8357202141a27b9ee0a2f7196ac0b4e1,None,607475.0,conda-forge/partseg/0.14.0/win-64/partseg-0.14.0-py39hcbf5309_0.tar.bz2,//api.anaconda.org/download/conda-forge/partseg/0.14.0/win-64/partseg-0.14.0-py39hcbf5309_0.tar.bz2,conda,0.14.0,conda-forge,['main'],conda,win-64/partseg-0.14.0-py38haa244fe_0.tar.bz2,x86_64-any-win32,False,win-64,py38haa244fe_0,0.0,"['appdirs >=1.4.4', 'czifile >=2019.5.22', 'defusedxml >=0.6.0', 'h5py >=2.8.0', 'imagecodecs >=2020.5.30', 'imageio >=2.5.0', 'magicgui >=0.3.3', 'mahotas >=1.4.9', 'napari >=0.4.8', 'nme >=0.1.4', 'numpy >=1.18.0', 'oiffile >=2019.1.1', 'openpyxl >=2.4.9', 'packaging >=20.0', 'pandas >=0.24.0', 'partsegcore-compiled-backend >=0.13.11', 'partsegdata 0.10.0', 'psygnal >=0.2.0', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'qtawesome >=1.0.3', 'qtpy >=1.7.0', 'requests >=2.18.0', 'scipy >=1.2.0', 'sentry-sdk >=0.14.3', 'simpleitk >=1.1.0', 'six >=1.11.0', 'superqt >=0.2.4', 'sympy >=1.1.1', 'tifffile >=2020.9.30', 'traceback-with-variables >=2.0.4', 'vispy >=0.6.4', 'xlrd >=1.1.0', 'xlsxwriter']",BSD-3-Clause,1650055214179.0,2022-04-15 20:51:26.743000+00:00,5249e86b622903621851b6a05a799813,None,610390.0,conda-forge/partseg/0.14.0/win-64/partseg-0.14.0-py38haa244fe_0.tar.bz2,//api.anaconda.org/download/conda-forge/partseg/0.14.0/win-64/partseg-0.14.0-py38haa244fe_0.tar.bz2,conda,0.14.0,conda-forge,['main'],conda,linux-64/partseg-0.14.1-py39hf3d152e_0.tar.bz2,x86_64-any-linux,True,linux-64,py39hf3d152e_0,0.0,"['appdirs >=1.4.4', 'czifile >=2019.5.22', 'defusedxml >=0.6.0', 'h5py >=2.8.0', 'imagecodecs >=2020.5.30', 'imageio >=2.5.0', 'magicgui >=0.3.3', 'mahotas >=1.4.9', 'napari >=0.4.8', 'nme >=0.1.4', 'numpy >=1.18.0', 'oiffile >=2019.1.1', 'openpyxl >=2.4.9', 'packaging >=20.0', 'pandas >=0.24.0', 'partsegcore-compiled-backend >=0.13.11', 'partsegdata 0.10.0', 'psygnal >=0.2.0', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'qtawesome >=1.0.3', 'qtpy >=1.7.0', 'requests >=2.18.0', 'scipy >=1.2.0', 'sentry-sdk >=0.14.3', 'simpleitk >=1.1.0', 'six >=1.11.0', 'superqt >=0.2.4', 'sympy >=1.1.1', 'tifffile >=2020.9.30', 'traceback-with-variables >=2.0.4', 'vispy >=0.6.4', 'xlrd >=1.1.0', 'xlsxwriter']",BSD-3-Clause,1651053421453.0,2022-04-27 10:03:08.888000+00:00,1f897bdba408c32a228c0c8fdf37175e,None,587816.0,conda-forge/partseg/0.14.1/linux-64/partseg-0.14.1-py39hf3d152e_0.tar.bz2,//api.anaconda.org/download/conda-forge/partseg/0.14.1/linux-64/partseg-0.14.1-py39hf3d152e_0.tar.bz2,conda,0.14.1,conda-forge,['main'],,, -417,PartSeg-smfish,0.1.3,PartSeg-smfish,PartSeg and napari plugin for smfish data,Grzegorz Bokota,BSD-3-Clause,https://github.com/4DNucleome/PartSeg-smfish,6356f1368b09ed38fedc8f04,['conda'],,https://github.com/4DNucleome/PartSeg-smfish,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/partseg-smfish,http://api.anaconda.org/packages/conda-forge/partseg-smfish,http://anaconda.org/conda-forge/partseg-smfish,"['0.1.0', '0.1.1', '0.1.2', '0.1.3']",0.1.3,0.1.3,['noarch'],6.0,,['pyhd8ed1ab_0'],0.1.0,conda-forge/partseg-smfish/0.1.0,1.0,0.0,2022-10-24 20:10:28.757000+00:00,2023-06-18 08:42:50.634000+00:00,conda,noarch/partseg-smfish-0.1.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'numpy', 'partseg >=0.13.0', 'python >=3.8', 'qtpy']",noarch,1666642071637.0,None-any-None,pyhd8ed1ab_0,2022-10-24 20:10:29.107000+00:00,138352b7c4e5ae223f15566993237ff0,None,16585.0,conda-forge/partseg-smfish/0.1.0/noarch/partseg-smfish-0.1.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/partseg-smfish/0.1.0/noarch/partseg-smfish-0.1.0-pyhd8ed1ab_0.tar.bz2,conda,0.1.0,conda-forge,['main'],public,,0.2.1,PartSeg-smfish.verify_points.find_single_points,Find single points,PartSeg_smfish.verify_points:find_single_points,,,,2.1,PartSeg-smfish,0.1.3,,PartSeg and napari plugin for smfish data,"# PartSeg-smfish +",text/markdown,,,Grzegorz Bokota ,BSD-3-Clause,"['Development Status :: 3 - Alpha', 'Framework :: napari', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Programming Language :: Python :: Implementation :: CPython', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Visualization']","['IPython >=7.7.0', 'PartSegCore-compiled-backend <0.16.0,>=0.13.11', 'PartSegData ==0.10.0', 'QtAwesome !=1.2.0,>=1.0.3', 'QtPy >=1.10.0', 'SimpleITK >=2.0.0', 'appdirs >=1.4.4', 'czifile >=2019.5.22', 'defusedxml >=0.6.0', 'fonticon-fontawesome6 >=6.1.1', 'h5py >=3.3.0', 'imagecodecs >=2020.5.30', 'imageio >=2.5.0', 'ipykernel >=5.2.0', 'local-migrator >=0.1.7', 'magicgui !=0.5.0,>=0.4.0', 'mahotas >=1.4.10', 'napari >=0.4.14', 'nme >=0.1.7', 'oiffile >=2020.1.18', 'openpyxl >=2.5.7', 'packaging >=20.0', 'pandas >=1.1.0', 'psygnal >=0.3.1', 'pydantic <3,>=1.9.1', 'pygments >=2.12.0', 'qtconsole >=4.7.7', 'requests >=2.25.0', 'scipy >=1.4.1', 'sentry-sdk >=2.4.0', 'six >=1.11.0', 'superqt >=0.3.0', 'sympy >=1.1.1', 'tifffile >=2020.9.30', 'traceback-with-variables >=2.0.4', 'vispy >=0.9.4', 'xlrd >=1.1.0', 'xlsxwriter >=2.0.0', 'numpy <2,>=1.18.5 ; python_version < ""3.10""', 'numpy >=1.18.5 ; python_version >= ""3.10""', ""PartSeg[accelerate,pyqt5] ; extra == 'all'"", ""autodoc-pydantic ; extra == 'docs'"", ""sphinx !=3.0.0,!=3.5.0 ; extra == 'docs'"", ""sphinx-autodoc-typehints ; extra == 'docs'"", ""sphinx-qt-documentation ; extra == 'docs'"", ""PartSeg[pyinstaller_base,pyqt5] ; extra == 'pyinstaller'"", ""PartSeg[accelerate] ; extra == 'pyinstaller_base'"", ""PyInstaller ; extra == 'pyinstaller_base'"", ""pydantic ; extra == 'pyinstaller_base'"", ""PartSeg[pyqt5] ; extra == 'pyqt'"", ""PyQt5 !=5.15.0,>=5.12.3 ; extra == 'pyqt5'"", ""napari[pyqt5] ; extra == 'pyqt5'"", ""PyQt6 ; extra == 'pyqt6'"", 'napari[pyqt6] >=0.5.0 ; (python_version >= ""3.9"") and extra == \'pyqt6\'', ""PartSeg[pyside2] ; extra == 'pyside'"", ""PySide2 !=5.15.0,>=5.12.3 ; extra == 'pyside2'"", ""napari[pyside] ; extra == 'pyside2'"", ""PySide6 ; extra == 'pyside6'"", 'napari[pyside6_experimental] >=0.5.0 ; (python_version >= ""3.9"") and extra == \'pyside6\'', ""coverage ; extra == 'test'"", ""lxml[html_clean] ; extra == 'test'"", ""pytest >=7.0.0 ; extra == 'test'"", ""pytest-qt ; extra == 'test'"", ""pytest-timeout ; extra == 'test'"", ""scikit-image ; extra == 'test'"", ""pytest ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""lxml ; extra == 'testing'""]",>=3.8,"['Homepage, https://partseg.github.io/', 'Documentation, https://partseg.readthedocs.io/en/stable/', 'Source Code, https://github.com/4DNucleome/PartSeg', 'User Support, https://github.com/4DNucleome/PartSeg/issues', 'Bug Tracker, https://github.com/4DNucleome/PartSeg/issues']","['accelerate', 'all', 'docs', 'pyinstaller', 'pyinstaller_base', 'pyqt', 'pyqt5', 'pyqt6', 'pyside', 'pyside2', 'pyside6', 'test', 'testing']",False,0.14.0,conda-forge/partseg/0.14.0,0.14.1,conda-forge/partseg/0.14.1,0.14.2,conda-forge/partseg/0.14.2,conda,osx-64/partseg-0.13.15-py39h6e9494a_0.tar.bz2,0.0,BSD-3-Clause,True,,"['appdirs >=1.4.4', 'czifile >=2019.5.22', 'defusedxml >=0.6.0', 'h5py >=2.8.0', 'imagecodecs >=2020.5.30', 'imageio >=2.5.0', 'magicgui >=0.3.3', 'mahotas >=1.4.9', 'napari >=0.4.8', 'numpy >=1.18.0', 'oiffile >=2019.1.1', 'openpyxl >=2.4.9', 'packaging >=20.0', 'pandas >=0.24.0', 'partsegcore-compiled-backend >=0.13.11', 'partsegdata 0.10.0', 'psygnal >=0.2.0', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'qtawesome >=1.0.3', 'qtpy >=1.7.0', 'requests >=2.18.0', 'scipy >=1.2.0', 'sentry-sdk >=0.14.3', 'simpleitk >=1.1.0', 'six >=1.11.0', 'superqt >=0.2.4', 'sympy >=1.1.1', 'tifffile >=2020.9.30', 'vispy >=0.6.4', 'xlrd >=1.1.0', 'xlsxwriter']",py39h6e9494a_0,1648813281824.0,x86_64-any-darwin,osx-64,2022-04-01 11:46:04.318000+00:00,331e2ba409b76aca7dc025b607b7f3f5,None,571207.0,conda-forge/partseg/0.13.15/osx-64/partseg-0.13.15-py39h6e9494a_0.tar.bz2,//api.anaconda.org/download/conda-forge/partseg/0.13.15/osx-64/partseg-0.13.15-py39h6e9494a_0.tar.bz2,conda,0.13.15,conda-forge,['main'],conda,osx-64/partseg-0.13.15-py38h50d1736_0.tar.bz2,0.0,BSD-3-Clause,True,,"['appdirs >=1.4.4', 'czifile >=2019.5.22', 'defusedxml >=0.6.0', 'h5py >=2.8.0', 'imagecodecs >=2020.5.30', 'imageio >=2.5.0', 'magicgui >=0.3.3', 'mahotas >=1.4.9', 'napari >=0.4.8', 'numpy >=1.18.0', 'oiffile >=2019.1.1', 'openpyxl >=2.4.9', 'packaging >=20.0', 'pandas >=0.24.0', 'partsegcore-compiled-backend >=0.13.11', 'partsegdata 0.10.0', 'psygnal >=0.2.0', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'qtawesome >=1.0.3', 'qtpy >=1.7.0', 'requests >=2.18.0', 'scipy >=1.2.0', 'sentry-sdk >=0.14.3', 'simpleitk >=1.1.0', 'six >=1.11.0', 'superqt >=0.2.4', 'sympy >=1.1.1', 'tifffile >=2020.9.30', 'vispy >=0.6.4', 'xlrd >=1.1.0', 'xlsxwriter']",osx-64,1648813345109.0,x86_64-any-darwin,py38h50d1736_0,2022-04-01 11:47:43.700000+00:00,853ac64337944edf84f9250252d37c0f,None,571108.0,conda-forge/partseg/0.13.15/osx-64/partseg-0.13.15-py38h50d1736_0.tar.bz2,//api.anaconda.org/download/conda-forge/partseg/0.13.15/osx-64/partseg-0.13.15-py38h50d1736_0.tar.bz2,conda,0.13.15,conda-forge,['main'],conda,linux-64/partseg-0.13.15-py39hf3d152e_0.tar.bz2,x86_64-any-linux,True,linux-64,py39hf3d152e_0,0.0,"['appdirs >=1.4.4', 'czifile >=2019.5.22', 'defusedxml >=0.6.0', 'h5py >=2.8.0', 'imagecodecs >=2020.5.30', 'imageio >=2.5.0', 'magicgui >=0.3.3', 'mahotas >=1.4.9', 'napari >=0.4.8', 'numpy >=1.18.0', 'oiffile >=2019.1.1', 'openpyxl >=2.4.9', 'packaging >=20.0', 'pandas >=0.24.0', 'partsegcore-compiled-backend >=0.13.11', 'partsegdata 0.10.0', 'psygnal >=0.2.0', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'qtawesome >=1.0.3', 'qtpy >=1.7.0', 'requests >=2.18.0', 'scipy >=1.2.0', 'sentry-sdk >=0.14.3', 'simpleitk >=1.1.0', 'six >=1.11.0', 'superqt >=0.2.4', 'sympy >=1.1.1', 'tifffile >=2020.9.30', 'vispy >=0.6.4', 'xlrd >=1.1.0', 'xlsxwriter']",BSD-3-Clause,,1648813400987.0,2022-04-01 11:47:59.287000+00:00,0adb8cdb15e686843f7084601ce1e69e,None,568272.0,conda-forge/partseg/0.13.15/linux-64/partseg-0.13.15-py39hf3d152e_0.tar.bz2,//api.anaconda.org/download/conda-forge/partseg/0.13.15/linux-64/partseg-0.13.15-py39hf3d152e_0.tar.bz2,conda,0.13.15,conda-forge,['main'],,PartSeg.load_image,Get Image Reader,PartSegCore.napari_plugins.load_image:napari_get_reader,PartSeg.write_tiff_image,Write tiff Image,PartSegCore.napari_plugins.save_tiff_layer:napari_write_images,PartSeg.write_tiff_labels,Write tiff Labels,PartSegCore.napari_plugins.save_tiff_layer:napari_write_labels,PartSeg.SearchLabel,Search Label,False,PartSeg.Measurement,Measurement,False,PartSeg.SimpleMeasurement,Simple Measurement,False,PartSeg.ROIAnalysisExtraction,ROI Analysis Extraction,False,PartSeg.load_mask_project,Get PartSeg mask project Reader,PartSegCore.napari_plugins.load_mask_project:napari_get_reader,PartSeg.write_tiff_image,['image+'],Image as tiff,PartSeg.write_tiff_labels,['labels'],"['.tif', '.tiff']",Labels as tiff,,,,0.14.3,conda-forge/partseg/0.14.3,0.14.4,conda-forge/partseg/0.14.4,0.14.6,conda-forge/partseg/0.14.6,conda,win-64/partseg-0.13.15-py38haa244fe_0.tar.bz2,0.0,BSD-3-Clause,False,,"['appdirs >=1.4.4', 'czifile >=2019.5.22', 'defusedxml >=0.6.0', 'h5py >=2.8.0', 'imagecodecs >=2020.5.30', 'imageio >=2.5.0', 'magicgui >=0.3.3', 'mahotas >=1.4.9', 'napari >=0.4.8', 'numpy >=1.18.0', 'oiffile >=2019.1.1', 'openpyxl >=2.4.9', 'packaging >=20.0', 'pandas >=0.24.0', 'partsegcore-compiled-backend >=0.13.11', 'partsegdata 0.10.0', 'psygnal >=0.2.0', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'qtawesome >=1.0.3', 'qtpy >=1.7.0', 'requests >=2.18.0', 'scipy >=1.2.0', 'sentry-sdk >=0.14.3', 'simpleitk >=1.1.0', 'six >=1.11.0', 'superqt >=0.2.4', 'sympy >=1.1.1', 'tifffile >=2020.9.30', 'vispy >=0.6.4', 'xlrd >=1.1.0', 'xlsxwriter']",win-64,1648813562562.0,x86_64-any-win32,py38haa244fe_0,2022-04-01 11:55:22.132000+00:00,a6b086dbfccd563c80f1cf659525409f,None,648352.0,conda-forge/partseg/0.13.15/win-64/partseg-0.13.15-py38haa244fe_0.tar.bz2,//api.anaconda.org/download/conda-forge/partseg/0.13.15/win-64/partseg-0.13.15-py38haa244fe_0.tar.bz2,conda,0.13.15,conda-forge,['main'],conda,win-64/partseg-0.13.15-py39hcbf5309_0.tar.bz2,0.0,BSD-3-Clause,False,,"['appdirs >=1.4.4', 'czifile >=2019.5.22', 'defusedxml >=0.6.0', 'h5py >=2.8.0', 'imagecodecs >=2020.5.30', 'imageio >=2.5.0', 'magicgui >=0.3.3', 'mahotas >=1.4.9', 'napari >=0.4.8', 'numpy >=1.18.0', 'oiffile >=2019.1.1', 'openpyxl >=2.4.9', 'packaging >=20.0', 'pandas >=0.24.0', 'partsegcore-compiled-backend >=0.13.11', 'partsegdata 0.10.0', 'psygnal >=0.2.0', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'qtawesome >=1.0.3', 'qtpy >=1.7.0', 'requests >=2.18.0', 'scipy >=1.2.0', 'sentry-sdk >=0.14.3', 'simpleitk >=1.1.0', 'six >=1.11.0', 'superqt >=0.2.4', 'sympy >=1.1.1', 'tifffile >=2020.9.30', 'vispy >=0.6.4', 'xlrd >=1.1.0', 'xlsxwriter']",win-64,1648813581568.0,x86_64-any-win32,py39hcbf5309_0,2022-04-01 11:55:50.671000+00:00,f2f8ea650db0088de92b38ac571039fe,None,640284.0,conda-forge/partseg/0.13.15/win-64/partseg-0.13.15-py39hcbf5309_0.tar.bz2,//api.anaconda.org/download/conda-forge/partseg/0.13.15/win-64/partseg-0.13.15-py39hcbf5309_0.tar.bz2,conda,0.13.15,conda-forge,['main'],conda,osx-64/partseg-0.14.0-py38h50d1736_0.tar.bz2,x86_64-any-darwin,True,osx-64,py38h50d1736_0,0.0,"['appdirs >=1.4.4', 'czifile >=2019.5.22', 'defusedxml >=0.6.0', 'h5py >=2.8.0', 'imagecodecs >=2020.5.30', 'imageio >=2.5.0', 'magicgui >=0.3.3', 'mahotas >=1.4.9', 'napari >=0.4.8', 'nme >=0.1.4', 'numpy >=1.18.0', 'oiffile >=2019.1.1', 'openpyxl >=2.4.9', 'packaging >=20.0', 'pandas >=0.24.0', 'partsegcore-compiled-backend >=0.13.11', 'partsegdata 0.10.0', 'psygnal >=0.2.0', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'qtawesome >=1.0.3', 'qtpy >=1.7.0', 'requests >=2.18.0', 'scipy >=1.2.0', 'sentry-sdk >=0.14.3', 'simpleitk >=1.1.0', 'six >=1.11.0', 'superqt >=0.2.4', 'sympy >=1.1.1', 'tifffile >=2020.9.30', 'traceback-with-variables >=2.0.4', 'vispy >=0.6.4', 'xlrd >=1.1.0', 'xlsxwriter']",BSD-3-Clause,,1650054524754.0,2022-04-15 20:33:53.991000+00:00,28d585199ef7edb0b7c4b77f51a2c264,None,589661.0,conda-forge/partseg/0.14.0/osx-64/partseg-0.14.0-py38h50d1736_0.tar.bz2,//api.anaconda.org/download/conda-forge/partseg/0.14.0/osx-64/partseg-0.14.0-py38h50d1736_0.tar.bz2,conda,0.14.0,conda-forge,['main'],,,,PartSeg.save_mask_roi,Write Labels as mask project,PartSegCore.napari_plugins.save_mask_roi:napari_write_labels,0.15.0,conda-forge/partseg/0.15.0,0.15.1,conda-forge/partseg/0.15.1,conda,linux-64/partseg-0.14.0-py39hf3d152e_0.tar.bz2,0.0,BSD-3-Clause,True,,"['appdirs >=1.4.4', 'czifile >=2019.5.22', 'defusedxml >=0.6.0', 'h5py >=2.8.0', 'imagecodecs >=2020.5.30', 'imageio >=2.5.0', 'magicgui >=0.3.3', 'mahotas >=1.4.9', 'napari >=0.4.8', 'nme >=0.1.4', 'numpy >=1.18.0', 'oiffile >=2019.1.1', 'openpyxl >=2.4.9', 'packaging >=20.0', 'pandas >=0.24.0', 'partsegcore-compiled-backend >=0.13.11', 'partsegdata 0.10.0', 'psygnal >=0.2.0', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'qtawesome >=1.0.3', 'qtpy >=1.7.0', 'requests >=2.18.0', 'scipy >=1.2.0', 'sentry-sdk >=0.14.3', 'simpleitk >=1.1.0', 'six >=1.11.0', 'superqt >=0.2.4', 'sympy >=1.1.1', 'tifffile >=2020.9.30', 'traceback-with-variables >=2.0.4', 'vispy >=0.6.4', 'xlrd >=1.1.0', 'xlsxwriter']",linux-64,1650054619741.0,x86_64-any-linux,py39hf3d152e_0,2022-04-15 20:34:33.433000+00:00,e1507d99f95c302677d8cb9f59d4850f,None,587180.0,conda-forge/partseg/0.14.0/linux-64/partseg-0.14.0-py39hf3d152e_0.tar.bz2,//api.anaconda.org/download/conda-forge/partseg/0.14.0/linux-64/partseg-0.14.0-py39hf3d152e_0.tar.bz2,conda,0.14.0,conda-forge,['main'],conda,osx-64/partseg-0.14.0-py39h6e9494a_0.tar.bz2,x86_64-any-darwin,True,osx-64,py39h6e9494a_0,0.0,"['appdirs >=1.4.4', 'czifile >=2019.5.22', 'defusedxml >=0.6.0', 'h5py >=2.8.0', 'imagecodecs >=2020.5.30', 'imageio >=2.5.0', 'magicgui >=0.3.3', 'mahotas >=1.4.9', 'napari >=0.4.8', 'nme >=0.1.4', 'numpy >=1.18.0', 'oiffile >=2019.1.1', 'openpyxl >=2.4.9', 'packaging >=20.0', 'pandas >=0.24.0', 'partsegcore-compiled-backend >=0.13.11', 'partsegdata 0.10.0', 'psygnal >=0.2.0', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'qtawesome >=1.0.3', 'qtpy >=1.7.0', 'requests >=2.18.0', 'scipy >=1.2.0', 'sentry-sdk >=0.14.3', 'simpleitk >=1.1.0', 'six >=1.11.0', 'superqt >=0.2.4', 'sympy >=1.1.1', 'tifffile >=2020.9.30', 'traceback-with-variables >=2.0.4', 'vispy >=0.6.4', 'xlrd >=1.1.0', 'xlsxwriter']",BSD-3-Clause,,1650054576930.0,2022-04-15 20:35:50.055000+00:00,453f57720349b7aa72b78c446c8f87e8,None,585327.0,conda-forge/partseg/0.14.0/osx-64/partseg-0.14.0-py39h6e9494a_0.tar.bz2,//api.anaconda.org/download/conda-forge/partseg/0.14.0/osx-64/partseg-0.14.0-py39h6e9494a_0.tar.bz2,conda,0.14.0,conda-forge,['main'],PartSeg.load_masked_image,Get Reader for image with mask,PartSegCore.napari_plugins.load_masked_image:napari_get_reader,PartSeg.SimpleMeasurement,Create Simple Measurement,PartSeg.plugins.napari_widgets.simple_measurement_widget:SimpleMeasurement,PartSeg.ROIAnalysisExtraction,Create ROI Analysis Extraction,PartSeg.plugins.napari_widgets:ROIAnalysisExtraction,PartSeg.DoubleThreshold,Create Double Threshold,PartSeg.plugins.napari_widgets:DoubleThreshold,PartSeg.NoiseFilter,Create Noise Filter,PartSeg.plugins.napari_widgets:NoiseFilter,"['.tif', '.tiff']",PartSeg.ROIMaskExtraction,ROI Mask Extraction,False,PartSeg.MaskCreate,Mask Create,False,PartSeg.PartSegGUILauncher,PartSeg GUI Launcher,False,PartSeg.ImageColormap,Image Colormap,False,conda,linux-64/partseg-0.14.0-py38h578d9bd_0.tar.bz2,x86_64-any-linux,True,linux-64,py38h578d9bd_0,0.0,"['appdirs >=1.4.4', 'czifile >=2019.5.22', 'defusedxml >=0.6.0', 'h5py >=2.8.0', 'imagecodecs >=2020.5.30', 'imageio >=2.5.0', 'magicgui >=0.3.3', 'mahotas >=1.4.9', 'napari >=0.4.8', 'nme >=0.1.4', 'numpy >=1.18.0', 'oiffile >=2019.1.1', 'openpyxl >=2.4.9', 'packaging >=20.0', 'pandas >=0.24.0', 'partsegcore-compiled-backend >=0.13.11', 'partsegdata 0.10.0', 'psygnal >=0.2.0', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'qtawesome >=1.0.3', 'qtpy >=1.7.0', 'requests >=2.18.0', 'scipy >=1.2.0', 'sentry-sdk >=0.14.3', 'simpleitk >=1.1.0', 'six >=1.11.0', 'superqt >=0.2.4', 'sympy >=1.1.1', 'tifffile >=2020.9.30', 'traceback-with-variables >=2.0.4', 'vispy >=0.6.4', 'xlrd >=1.1.0', 'xlsxwriter']",BSD-3-Clause,,1650054502692.0,2022-04-15 20:36:42.458000+00:00,5f6e20339b9a91f3b993328ddb24dd5b,None,593362.0,conda-forge/partseg/0.14.0/linux-64/partseg-0.14.0-py38h578d9bd_0.tar.bz2,//api.anaconda.org/download/conda-forge/partseg/0.14.0/linux-64/partseg-0.14.0-py38h578d9bd_0.tar.bz2,conda,0.14.0,conda-forge,['main'],conda,win-64/partseg-0.14.0-py39hcbf5309_0.tar.bz2,x86_64-any-win32,False,win-64,py39hcbf5309_0,0.0,"['appdirs >=1.4.4', 'czifile >=2019.5.22', 'defusedxml >=0.6.0', 'h5py >=2.8.0', 'imagecodecs >=2020.5.30', 'imageio >=2.5.0', 'magicgui >=0.3.3', 'mahotas >=1.4.9', 'napari >=0.4.8', 'nme >=0.1.4', 'numpy >=1.18.0', 'oiffile >=2019.1.1', 'openpyxl >=2.4.9', 'packaging >=20.0', 'pandas >=0.24.0', 'partsegcore-compiled-backend >=0.13.11', 'partsegdata 0.10.0', 'psygnal >=0.2.0', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'qtawesome >=1.0.3', 'qtpy >=1.7.0', 'requests >=2.18.0', 'scipy >=1.2.0', 'sentry-sdk >=0.14.3', 'simpleitk >=1.1.0', 'six >=1.11.0', 'superqt >=0.2.4', 'sympy >=1.1.1', 'tifffile >=2020.9.30', 'traceback-with-variables >=2.0.4', 'vispy >=0.6.4', 'xlrd >=1.1.0', 'xlsxwriter']",BSD-3-Clause,,1650055115181.0,2022-04-15 20:48:11.085000+00:00,8357202141a27b9ee0a2f7196ac0b4e1,None,607475.0,conda-forge/partseg/0.14.0/win-64/partseg-0.14.0-py39hcbf5309_0.tar.bz2,//api.anaconda.org/download/conda-forge/partseg/0.14.0/win-64/partseg-0.14.0-py39hcbf5309_0.tar.bz2,conda,0.14.0,conda-forge,['main'],0.15.2,conda-forge/partseg/0.15.2,conda,win-64/partseg-0.14.0-py38haa244fe_0.tar.bz2,x86_64-any-win32,False,win-64,py38haa244fe_0,0.0,"['appdirs >=1.4.4', 'czifile >=2019.5.22', 'defusedxml >=0.6.0', 'h5py >=2.8.0', 'imagecodecs >=2020.5.30', 'imageio >=2.5.0', 'magicgui >=0.3.3', 'mahotas >=1.4.9', 'napari >=0.4.8', 'nme >=0.1.4', 'numpy >=1.18.0', 'oiffile >=2019.1.1', 'openpyxl >=2.4.9', 'packaging >=20.0', 'pandas >=0.24.0', 'partsegcore-compiled-backend >=0.13.11', 'partsegdata 0.10.0', 'psygnal >=0.2.0', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'qtawesome >=1.0.3', 'qtpy >=1.7.0', 'requests >=2.18.0', 'scipy >=1.2.0', 'sentry-sdk >=0.14.3', 'simpleitk >=1.1.0', 'six >=1.11.0', 'superqt >=0.2.4', 'sympy >=1.1.1', 'tifffile >=2020.9.30', 'traceback-with-variables >=2.0.4', 'vispy >=0.6.4', 'xlrd >=1.1.0', 'xlsxwriter']",BSD-3-Clause,1650055214179.0,2022-04-15 20:51:26.743000+00:00,5249e86b622903621851b6a05a799813,None,610390.0,conda-forge/partseg/0.14.0/win-64/partseg-0.14.0-py38haa244fe_0.tar.bz2,//api.anaconda.org/download/conda-forge/partseg/0.14.0/win-64/partseg-0.14.0-py38haa244fe_0.tar.bz2,conda,0.14.0,conda-forge,['main'],0.15.3,conda-forge/partseg/0.15.3,conda,linux-64/partseg-0.14.1-py39hf3d152e_0.tar.bz2,x86_64-any-linux,True,linux-64,py39hf3d152e_0,0.0,"['appdirs >=1.4.4', 'czifile >=2019.5.22', 'defusedxml >=0.6.0', 'h5py >=2.8.0', 'imagecodecs >=2020.5.30', 'imageio >=2.5.0', 'magicgui >=0.3.3', 'mahotas >=1.4.9', 'napari >=0.4.8', 'nme >=0.1.4', 'numpy >=1.18.0', 'oiffile >=2019.1.1', 'openpyxl >=2.4.9', 'packaging >=20.0', 'pandas >=0.24.0', 'partsegcore-compiled-backend >=0.13.11', 'partsegdata 0.10.0', 'psygnal >=0.2.0', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'qtawesome >=1.0.3', 'qtpy >=1.7.0', 'requests >=2.18.0', 'scipy >=1.2.0', 'sentry-sdk >=0.14.3', 'simpleitk >=1.1.0', 'six >=1.11.0', 'superqt >=0.2.4', 'sympy >=1.1.1', 'tifffile >=2020.9.30', 'traceback-with-variables >=2.0.4', 'vispy >=0.6.4', 'xlrd >=1.1.0', 'xlsxwriter']",BSD-3-Clause,1651053421453.0,2022-04-27 10:03:08.888000+00:00,1f897bdba408c32a228c0c8fdf37175e,None,587816.0,conda-forge/partseg/0.14.1/linux-64/partseg-0.14.1-py39hf3d152e_0.tar.bz2,//api.anaconda.org/download/conda-forge/partseg/0.14.1/linux-64/partseg-0.14.1-py39hf3d152e_0.tar.bz2,conda,0.14.1,conda-forge,['main'],conda,linux-64/partseg-0.14.1-py38h578d9bd_0.tar.bz2,x86_64-any-linux,True,linux-64,py38h578d9bd_0,0.0,"['appdirs >=1.4.4', 'czifile >=2019.5.22', 'defusedxml >=0.6.0', 'h5py >=2.8.0', 'imagecodecs >=2020.5.30', 'imageio >=2.5.0', 'magicgui >=0.3.3', 'mahotas >=1.4.9', 'napari >=0.4.8', 'nme >=0.1.4', 'numpy >=1.18.0', 'oiffile >=2019.1.1', 'openpyxl >=2.4.9', 'packaging >=20.0', 'pandas >=0.24.0', 'partsegcore-compiled-backend >=0.13.11', 'partsegdata 0.10.0', 'psygnal >=0.2.0', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'qtawesome >=1.0.3', 'qtpy >=1.7.0', 'requests >=2.18.0', 'scipy >=1.2.0', 'sentry-sdk >=0.14.3', 'simpleitk >=1.1.0', 'six >=1.11.0', 'superqt >=0.2.4', 'sympy >=1.1.1', 'tifffile >=2020.9.30', 'traceback-with-variables >=2.0.4', 'vispy >=0.6.4', 'xlrd >=1.1.0', 'xlsxwriter']",BSD-3-Clause,2022-04-27 10:04:47.334000+00:00,354f722c3d55d18e3dda2d762e6dbef0,None,589967.0,conda-forge/partseg/0.14.1/linux-64/partseg-0.14.1-py38h578d9bd_0.tar.bz2,//api.anaconda.org/download/conda-forge/partseg/0.14.1/linux-64/partseg-0.14.1-py38h578d9bd_0.tar.bz2,conda,0.14.1,conda-forge,['main'],,, +439,PartSeg-smfish,0.1.3,PartSeg-smfish,PartSeg and napari plugin for smfish data,Grzegorz Bokota,BSD-3-Clause,https://github.com/4DNucleome/PartSeg-smfish,6356f1368b09ed38fedc8f04,['conda'],,https://github.com/4DNucleome/PartSeg-smfish,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/partseg-smfish,http://api.anaconda.org/packages/conda-forge/partseg-smfish,http://anaconda.org/conda-forge/partseg-smfish,"['0.1.0', '0.1.1', '0.1.2', '0.1.3']",0.1.3,0.1.3,['noarch'],6.0,,['pyhd8ed1ab_0'],0.1.0,conda-forge/partseg-smfish/0.1.0,1.0,0.0,2022-10-24 20:10:28.757000+00:00,2023-06-18 08:42:50.634000+00:00,conda,noarch/partseg-smfish-0.1.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'numpy', 'partseg >=0.13.0', 'python >=3.8', 'qtpy']",noarch,1666642071637.0,None-any-None,pyhd8ed1ab_0,2022-10-24 20:10:29.107000+00:00,138352b7c4e5ae223f15566993237ff0,None,16585.0,conda-forge/partseg-smfish/0.1.0/noarch/partseg-smfish-0.1.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/partseg-smfish/0.1.0/noarch/partseg-smfish-0.1.0-pyhd8ed1ab_0.tar.bz2,conda,0.1.0,conda-forge,['main'],public,,0.2.1,PartSeg-smfish.verify_points.find_single_points,Find single points,PartSeg_smfish.verify_points:find_single_points,,,,2.1,PartSeg-smfish,0.1.3,,PartSeg and napari plugin for smfish data,"# PartSeg-smfish [![License BSD-3](https://img.shields.io/pypi/l/PartSeg-smfish.svg?color=green)](https://github.com/4DNucleome/PartSeg-smfish/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/PartSeg-smfish.svg?color=green)](https://pypi.org/project/PartSeg-smfish) @@ -43422,8 +45568,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/4DNucleome/PartSeg-smfish,Grzegorz Bokota,g.bokota@cent.uw.edu.pl,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['PartSeg (>=0.13.0)', 'numpy', 'napari', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/4DNucleome/PartSeg-smfish/issues', 'Documentation, https://github.com/4DNucleome/PartSeg-smfish#README.md', 'Source Code, https://github.com/4DNucleome/PartSeg-smfish', 'User Support, https://github.com/4DNucleome/PartSeg-smfish/issues']",['testing'],False,0.1.1,conda-forge/partseg-smfish/0.1.1,0.1.2,conda-forge/partseg-smfish/0.1.2,0.1.3,conda-forge/partseg-smfish/0.1.3,conda,noarch/partseg-smfish-0.1.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'numpy', 'partseg >=0.13.0', 'python >=3.8', 'qtpy']",pyhd8ed1ab_0,1666681358684.0,None-any-None,noarch,2022-10-25 07:05:10.857000+00:00,d8963f2982de0223067f5a2777fea58e,None,16646.0,conda-forge/partseg-smfish/0.1.1/noarch/partseg-smfish-0.1.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/partseg-smfish/0.1.1/noarch/partseg-smfish-0.1.1-pyhd8ed1ab_0.tar.bz2,conda,0.1.1,conda-forge,['main'],conda,noarch/partseg-smfish-0.1.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'numpy', 'partseg >=0.13.0', 'python >=3.8', 'qtpy']",noarch,1666959122809.0,None-any-None,pyhd8ed1ab_0,2022-10-28 12:14:56.837000+00:00,a7e76a1875603ae0a74aa2a58b7e0973,None,16650.0,conda-forge/partseg-smfish/0.1.2/noarch/partseg-smfish-0.1.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/partseg-smfish/0.1.2/noarch/partseg-smfish-0.1.2-pyhd8ed1ab_0.tar.bz2,conda,0.1.2,conda-forge,['main'],conda,noarch/partseg-smfish-0.1.3-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'numpy', 'partseg >=0.13.0', 'python >=3.8', 'qtpy']",BSD-3-Clause,python,1670359848264.0,2022-12-06 20:53:28.690000+00:00,f33dfb3d5fa71ca61faa433369e470cd,6d847f060211bd8e2be10b8af1a3f31e598d5a3c7b9f9795da971c9c6ffe9e36,17991.0,conda-forge/partseg-smfish/0.1.3/noarch/partseg-smfish-0.1.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/partseg-smfish/0.1.3/noarch/partseg-smfish-0.1.3-pyhd8ed1ab_0.conda,conda,0.1.3,conda-forge,['main'],,PartSeg-smfish.verify_points.verify_segmentation,Verify segmentation,PartSeg_smfish.verify_points:verify_segmentation,PartSeg-smfish.copy_labels.CopyLabelWidget,Copy labels,PartSeg_smfish.copy_labels:CopyLabelWidget,PartSeg-smfish.segmentation.gauss_background_estimate,Gauss background estimate,PartSeg_smfish.segmentation:gauss_background_estimate,PartSeg-smfish.verify_points.verify_segmentation,Verify points,False,PartSeg-smfish.verify_points.find_single_points,Find single points,False,PartSeg-smfish.copy_labels.CopyLabelWidget,Copy labels,False,PartSeg-smfish.segmentation.gauss_background_estimate,Gauss background estimate,True,PartSeg-smfish.segmentation.laplacian_check,Laplacian check,PartSeg_smfish.segmentation:laplacian_check,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PartSeg-smfish.segmentation.laplacian_estimate,Laplacian estimate,PartSeg_smfish.segmentation:laplacian_estimate,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PartSeg-smfish.segmentation.maximum_projection,Maximum projection,PartSeg_smfish.segmentation:maximum_projection,,,,,,,,,,,,,,,,,PartSeg-smfish.segmentation.laplacian_check,Laplacian check,True,PartSeg-smfish.segmentation.laplacian_estimate,Laplacian estimate,True,PartSeg-smfish.segmentation.maximum_projection,Maximum projection,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -418,platelet-unet-watershed,0.0.3,platelet-unet-watershed,Segment platelets with pretrained unet and affinity watershed,Juan Nunez-Iglesias & Abigail McGovern,BSD-3,https://github.com/jni/platelet-unet-watershed,61fe7304a3c32938bdf36e79,['conda'],,https://github.com/jni/platelet-unet-watershed,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/platelet-unet-watershed,http://api.anaconda.org/packages/conda-forge/platelet-unet-watershed,http://anaconda.org/conda-forge/platelet-unet-watershed,['0.0.3'],0.0.3,0.0.3,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.3,conda-forge/platelet-unet-watershed/0.0.3,1.0,0.0,2022-02-05 12:52:16.283000+00:00,2023-06-18 08:40:47.524000+00:00,conda,noarch/platelet-unet-watershed-0.0.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui >=0.2.11', 'napari >=0.4.11', 'napari-plugin-engine >=0.1.4', 'numba >=0.50', 'numpy', 'python >=3.7', 'pytorch', 'scikit-image', 'scipy', 'toolz', 'torchvision', 'tqdm']",noarch,1644065278007.0,None-any-None,pyhd8ed1ab_0,2022-02-05 12:52:17.081000+00:00,b448477f3ee15b5b1f649d2d50b0d69d,None,37015784.0,conda-forge/platelet-unet-watershed/0.0.3/noarch/platelet-unet-watershed-0.0.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/platelet-unet-watershed/0.0.3/noarch/platelet-unet-watershed-0.0.3-pyhd8ed1ab_0.tar.bz2,conda,0.0.3,conda-forge,['main'],public,,0.2.1,platelet-unet-watershed.UNetPredictWidget,UNetPredictWidget,plateseg._dock_widget:UNetPredictWidget,,,,2.1,platelet-unet-watershed,0.0.3,,Segment platelets with pretrained unet and affinity watershed,"# platelet-unet-watershed +",text/markdown,https://github.com/4DNucleome/PartSeg-smfish,Grzegorz Bokota,g.bokota@cent.uw.edu.pl,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['PartSeg (>=0.13.0)', 'numpy', 'napari', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/4DNucleome/PartSeg-smfish/issues', 'Documentation, https://github.com/4DNucleome/PartSeg-smfish#README.md', 'Source Code, https://github.com/4DNucleome/PartSeg-smfish', 'User Support, https://github.com/4DNucleome/PartSeg-smfish/issues']",['testing'],False,0.1.1,conda-forge/partseg-smfish/0.1.1,0.1.2,conda-forge/partseg-smfish/0.1.2,0.1.3,conda-forge/partseg-smfish/0.1.3,conda,noarch/partseg-smfish-0.1.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'numpy', 'partseg >=0.13.0', 'python >=3.8', 'qtpy']",pyhd8ed1ab_0,1666681358684.0,None-any-None,noarch,2022-10-25 07:05:10.857000+00:00,d8963f2982de0223067f5a2777fea58e,None,16646.0,conda-forge/partseg-smfish/0.1.1/noarch/partseg-smfish-0.1.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/partseg-smfish/0.1.1/noarch/partseg-smfish-0.1.1-pyhd8ed1ab_0.tar.bz2,conda,0.1.1,conda-forge,['main'],conda,noarch/partseg-smfish-0.1.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari', 'numpy', 'partseg >=0.13.0', 'python >=3.8', 'qtpy']",noarch,1666959122809.0,None-any-None,pyhd8ed1ab_0,2022-10-28 12:14:56.837000+00:00,a7e76a1875603ae0a74aa2a58b7e0973,None,16650.0,conda-forge/partseg-smfish/0.1.2/noarch/partseg-smfish-0.1.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/partseg-smfish/0.1.2/noarch/partseg-smfish-0.1.2-pyhd8ed1ab_0.tar.bz2,conda,0.1.2,conda-forge,['main'],conda,noarch/partseg-smfish-0.1.3-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['napari', 'numpy', 'partseg >=0.13.0', 'python >=3.8', 'qtpy']",BSD-3-Clause,python,1670359848264.0,2022-12-06 20:53:28.690000+00:00,f33dfb3d5fa71ca61faa433369e470cd,6d847f060211bd8e2be10b8af1a3f31e598d5a3c7b9f9795da971c9c6ffe9e36,17991.0,conda-forge/partseg-smfish/0.1.3/noarch/partseg-smfish-0.1.3-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/partseg-smfish/0.1.3/noarch/partseg-smfish-0.1.3-pyhd8ed1ab_0.conda,conda,0.1.3,conda-forge,['main'],,PartSeg-smfish.verify_points.verify_segmentation,Verify segmentation,PartSeg_smfish.verify_points:verify_segmentation,PartSeg-smfish.copy_labels.CopyLabelWidget,Copy labels,PartSeg_smfish.copy_labels:CopyLabelWidget,PartSeg-smfish.segmentation.gauss_background_estimate,Gauss background estimate,PartSeg_smfish.segmentation:gauss_background_estimate,PartSeg-smfish.verify_points.verify_segmentation,Verify points,False,PartSeg-smfish.verify_points.find_single_points,Find single points,False,PartSeg-smfish.copy_labels.CopyLabelWidget,Copy labels,False,PartSeg-smfish.segmentation.gauss_background_estimate,Gauss background estimate,True,PartSeg-smfish.segmentation.laplacian_check,Laplacian check,PartSeg_smfish.segmentation:laplacian_check,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PartSeg-smfish.segmentation.laplacian_estimate,Laplacian estimate,PartSeg_smfish.segmentation:laplacian_estimate,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PartSeg-smfish.segmentation.maximum_projection,Maximum projection,PartSeg_smfish.segmentation:maximum_projection,,,,,,,,,,,,,,PartSeg-smfish.segmentation.laplacian_check,Laplacian check,True,PartSeg-smfish.segmentation.laplacian_estimate,Laplacian estimate,True,PartSeg-smfish.segmentation.maximum_projection,Maximum projection,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +440,platelet-unet-watershed,0.0.3,platelet-unet-watershed,Segment platelets with pretrained unet and affinity watershed,Juan Nunez-Iglesias & Abigail McGovern,BSD-3,https://github.com/jni/platelet-unet-watershed,61fe7304a3c32938bdf36e79,['conda'],,https://github.com/jni/platelet-unet-watershed,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/platelet-unet-watershed,http://api.anaconda.org/packages/conda-forge/platelet-unet-watershed,http://anaconda.org/conda-forge/platelet-unet-watershed,['0.0.3'],0.0.3,0.0.3,['noarch'],7.0,,"['pyhd8ed1ab_0', 'pyhd8ed1ab_1']",0.0.3,conda-forge/platelet-unet-watershed/0.0.3,1.0,0.0,2022-02-05 12:52:16.283000+00:00,2025-01-02 01:17:57.818000+00:00,conda,noarch/platelet-unet-watershed-0.0.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui >=0.2.11', 'napari >=0.4.11', 'napari-plugin-engine >=0.1.4', 'numba >=0.50', 'numpy', 'python >=3.7', 'pytorch', 'scikit-image', 'scipy', 'toolz', 'torchvision', 'tqdm']",noarch,1644065278007.0,None-any-None,pyhd8ed1ab_0,2022-02-05 12:52:17.081000+00:00,b448477f3ee15b5b1f649d2d50b0d69d,None,37015784.0,conda-forge/platelet-unet-watershed/0.0.3/noarch/platelet-unet-watershed-0.0.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/platelet-unet-watershed/0.0.3/noarch/platelet-unet-watershed-0.0.3-pyhd8ed1ab_0.tar.bz2,conda,0.0.3,conda-forge,['main'],public,,0.2.1,platelet-unet-watershed.UNetPredictWidget,UNetPredictWidget,plateseg._dock_widget:UNetPredictWidget,,,,2.1,platelet-unet-watershed,0.0.3,,Segment platelets with pretrained unet and affinity watershed,"# platelet-unet-watershed [![License](https://img.shields.io/pypi/l/platelet-unet-watershed.svg?color=green)](https://github.com/jni/platelet-unet-watershed/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/platelet-unet-watershed.svg?color=green)](https://pypi.org/project/platelet-unet-watershed) @@ -43480,8 +45626,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/jni/platelet-unet-watershed,Juan Nunez-Iglesias & Abigail McGovern,juan.nunez-iglesias@monash.edu,BSD-3,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['magicgui >=0.2.11', 'napari >=0.4.11', 'napari-plugin-engine >=0.1.4', 'numba >=0.50', 'numpy', 'scikit-image', 'scipy', 'toolz', 'torch', 'torchvision', 'tqdm']",>=3.7,"['Bug Tracker, https://github.com/jni/platelet-unet-watershed/issues', 'Documentation, https://github.com/jni/platelet-unet-watershed#README.md', 'Source Code, https://github.com/jni/platelet-unet-watershed', 'User Support, https://github.com/jni/platelet-unet-watershed/issues']",,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,platelet-unet-watershed.copy_data,copy_data,plateseg._dock_widget:copy_data,,,,,,,platelet-unet-watershed.UNetPredictWidget,UNetPredictWidget,False,platelet-unet-watershed.copy_data,copy_data,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -419,platetrack,0.0.7,platetrack,napari plugin for tracking platelets with trackpy,Abigail S McGovern,BSD-3-Clause,https://github.com/AbigailMcGovern/platelet-tracking,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.1.0,platetrack.track_platelets,Create track_platelets,platetrack.dock_widgets:track_platelets,platetrack.load_tracks,"['*.csv', '*.parquet']",False,2.1,platetrack,0.0.7,,napari plugin for tracking platelets with trackpy,"# platetrack +",text/markdown,https://github.com/jni/platelet-unet-watershed,Juan Nunez-Iglesias & Abigail McGovern,juan.nunez-iglesias@monash.edu,BSD-3,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['magicgui>=0.2.11', 'napari>=0.4.11', 'napari-plugin-engine>=0.1.4', 'numba>=0.50', 'numpy', 'scikit-image', 'scipy', 'toolz', 'torch', 'torchvision', 'tqdm']",>=3.7,"['Bug Tracker, https://github.com/jni/platelet-unet-watershed/issues', 'Documentation, https://github.com/jni/platelet-unet-watershed#README.md', 'Source Code, https://github.com/jni/platelet-unet-watershed', 'User Support, https://github.com/jni/platelet-unet-watershed/issues']",,True,,,,,,,conda,noarch/platelet-unet-watershed-0.0.3-pyhd8ed1ab_1.conda,1.0,BSD-3-Clause,False,python,"['magicgui >=0.2.11', 'napari >=0.4.11', 'napari-plugin-engine >=0.1.4', 'numba >=0.50', 'numpy', 'python >=3.9', 'pytorch', 'scikit-image', 'scipy', 'toolz', 'torchvision', 'tqdm']",pyhd8ed1ab_1,1735780451027.0,None-any-None,noarch,2025-01-02 01:17:53.531000+00:00,a5c7cacd9859d3a1ff815de94920d96b,e62bcaf06003e9225454e20231dca1e78bf01c83495bcc87951402041791213f,36156583.0,conda-forge/platelet-unet-watershed/0.0.3/noarch/platelet-unet-watershed-0.0.3-pyhd8ed1ab_1.conda,//api.anaconda.org/download/conda-forge/platelet-unet-watershed/0.0.3/noarch/platelet-unet-watershed-0.0.3-pyhd8ed1ab_1.conda,conda,0.0.3,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,platelet-unet-watershed.copy_data,copy_data,plateseg._dock_widget:copy_data,,,,,,,platelet-unet-watershed.UNetPredictWidget,UNetPredictWidget,False,platelet-unet-watershed.copy_data,copy_data,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +441,platetrack,0.0.7,platetrack,napari plugin for tracking platelets with trackpy,Abigail S McGovern,BSD-3-Clause,https://github.com/AbigailMcGovern/platelet-tracking,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.1.0,platetrack.track_platelets,Create track_platelets,platetrack.dock_widgets:track_platelets,platetrack.load_tracks,"['*.csv', '*.parquet']",False,2.1,platetrack,0.0.7,,napari plugin for tracking platelets with trackpy,"# platetrack A small napari plugin for tracking platelets. Platetrack requires a segmentation and an image containing raw data. We recomend trying the napari plugin iterseg to generate these. Platetrack uses trackpy for tracking and outputs a dataframe with platelet coordinates, tracking information, and several other variables, which provide information about each platelet. @@ -43571,8 +45717,8 @@ A number of variables are computed about the platelets alongside the tracking. E **User support:** If you have an issue with platetrack please add an issue (go to the Issues tab at the top of the GitHub page). If your issue is a bug, please include as much information as possible to help debug the problem. Examples of information include: details about the image and segmentation data (dimensions), number of images, number of samples you are trying to take. If you are requesting an improvement, try to be as clear as possible about what you need. **Contributing:** If you want to contribute to platetrack, please fork the repo and if you want to make changes make a pull request with as much detail about the change as possible. Please ensure any changes you want to make don't break the existing functions. -",text/markdown,https://github.com/AbigailMcGovern/platelet-tracking,Abigail S McGovern,abigail_mcgovern@hotmail.com,BSD-3-Clause,"['Framework :: napari', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License', 'Intended Audience :: Science/Research', 'Topic :: Scientific/Engineering', 'Topic :: Scientific/Engineering :: Image Processing']","['napari', 'numpy', 'trackpy', 'pandas', 'plateletanalysis']",>=3.7,"['Bug Tracker, https://github.com/abigailmcgovern/platelet-tracking/issues', 'Documentation, https://github.com/abigailmcgovern/platelet-tracking#README.md', 'Source Code, https://github.com/abigailmcgovern/platelet-tracking', 'User Support, https://github.com/abigailmcgovern/platelet-tracking/issues']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,platetrack.load_tracks,Load a tracks csv into a tracks layer,platetrack._io:get_napari_reader,,,,,,,platetrack.track_platelets,track_platelets,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -420,PlatyMatch,0.0.3,PlatyMatch,PlatyMatch allows registration of volumetric images of embryos by establishing correspondences between cells,Manan Lalit,BSD-3,https://github.com/juglab/PlatyMatch,62063de06526fc1f99aac717,['conda'],,https://github.com/juglab/PlatyMatch,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/platymatch,http://api.anaconda.org/packages/conda-forge/platymatch,http://anaconda.org/conda-forge/platymatch,['0.0.3'],0.0.3,0.0.3,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.3,conda-forge/platymatch/0.0.3,1.0,0.0,2022-02-11 10:43:42.580000+00:00,2023-06-18 08:40:49.823000+00:00,conda,noarch/platymatch-0.0.3-pyhd8ed1ab_0.tar.bz2,0.0,CC-BY-NC-4.0,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'pandas', 'pytest', 'python >=3.6', 'scikit-image', 'scikit-learn', 'simpleitk', 'tqdm']",noarch,1644576006995.0,None-any-None,pyhd8ed1ab_0,2022-02-11 10:43:42.881000+00:00,e241e3b77818935d325419ebe6a0a4b1,None,31053.0,conda-forge/platymatch/0.0.3/noarch/platymatch-0.0.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/platymatch/0.0.3/noarch/platymatch-0.0.3-pyhd8ed1ab_0.tar.bz2,conda,0.0.3,conda-forge,['main'],public,,0.2.1,PlatyMatch.DetectNuclei,DetectNuclei,platymatch._dock_widget:DetectNuclei,,,,2.1,PlatyMatch,0.0.3,['UNKNOWN'],PlatyMatch allows registration of volumetric images of embryos by establishing correspondences between cells,"[![DOI:10.1007/978-3-030-66415-2_30](https://zenodo.org/badge/DOI/10.1007/978-3-030-66415-2_30.svg)](https://link.springer.com/chapter/10.1007/978-3-030-66415-2_30) +",text/markdown,https://github.com/AbigailMcGovern/platelet-tracking,Abigail S McGovern,abigail_mcgovern@hotmail.com,BSD-3-Clause,"['Framework :: napari', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License', 'Intended Audience :: Science/Research', 'Topic :: Scientific/Engineering', 'Topic :: Scientific/Engineering :: Image Processing']","['napari', 'numpy', 'trackpy', 'pandas', 'plateletanalysis']",>=3.7,"['Bug Tracker, https://github.com/abigailmcgovern/platelet-tracking/issues', 'Documentation, https://github.com/abigailmcgovern/platelet-tracking#README.md', 'Source Code, https://github.com/abigailmcgovern/platelet-tracking', 'User Support, https://github.com/abigailmcgovern/platelet-tracking/issues']",,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,platetrack.load_tracks,Load a tracks csv into a tracks layer,platetrack._io:get_napari_reader,,,,,,,platetrack.track_platelets,track_platelets,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +442,PlatyMatch,0.0.3,PlatyMatch,PlatyMatch allows registration of volumetric images of embryos by establishing correspondences between cells,Manan Lalit,BSD-3,https://github.com/juglab/PlatyMatch,62063de06526fc1f99aac717,['conda'],,https://github.com/juglab/PlatyMatch,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/platymatch,http://api.anaconda.org/packages/conda-forge/platymatch,http://anaconda.org/conda-forge/platymatch,['0.0.3'],0.0.3,0.0.3,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.3,conda-forge/platymatch/0.0.3,1.0,0.0,2022-02-11 10:43:42.580000+00:00,2023-06-18 08:40:49.823000+00:00,conda,noarch/platymatch-0.0.3-pyhd8ed1ab_0.tar.bz2,0.0,CC-BY-NC-4.0,False,python,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'pandas', 'pytest', 'python >=3.6', 'scikit-image', 'scikit-learn', 'simpleitk', 'tqdm']",noarch,1644576006995.0,None-any-None,pyhd8ed1ab_0,2022-02-11 10:43:42.881000+00:00,e241e3b77818935d325419ebe6a0a4b1,None,31053.0,conda-forge/platymatch/0.0.3/noarch/platymatch-0.0.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/platymatch/0.0.3/noarch/platymatch-0.0.3-pyhd8ed1ab_0.tar.bz2,conda,0.0.3,conda-forge,['main'],public,,0.2.1,PlatyMatch.DetectNuclei,DetectNuclei,platymatch._dock_widget:DetectNuclei,,,,2.1,PlatyMatch,0.0.3,['UNKNOWN'],PlatyMatch allows registration of volumetric images of embryos by establishing correspondences between cells,"[![DOI:10.1007/978-3-030-66415-2_30](https://zenodo.org/badge/DOI/10.1007/978-3-030-66415-2_30.svg)](https://link.springer.com/chapter/10.1007/978-3-030-66415-2_30) [![License: MIT](https://img.shields.io/badge/License-MIT-blue.svg)](https://opensource.org/licenses/MIT) [![PyPI](https://img.shields.io/pypi/v/PlatyMatch.svg?color=green)](https://pypi.org/project/PlatyMatch) [![Python Version](https://img.shields.io/pypi/pyversions/PlatyMatch.svg?color=green)](https://python.org) @@ -43731,8 +45877,8 @@ isbn=""978-3-030-66415-2"" [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/juglab/PlatyMatch,Manan Lalit,lalit@mpi-cbg.de,BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'scikit-image', 'scikit-learn', 'tqdm', 'simpleitk', 'napari[all]', 'pandas', 'pytest']",>=3.6,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PlatyMatch.EstimateTransform,EstimateTransform,platymatch._dock_widget:EstimateTransform,PlatyMatch.EvaluateMetrics,EvaluateMetrics,platymatch._dock_widget:EvaluateMetrics,,,,PlatyMatch.DetectNuclei,DetectNuclei,False,PlatyMatch.EstimateTransform,EstimateTransform,False,PlatyMatch.EvaluateMetrics,EvaluateMetrics,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -421,popidd-io,0.0.1,POPIDD IO,A simple plugin to read digital pathology images and annotations,Ferran Cardoso Rodriguez," +",text/markdown,https://github.com/juglab/PlatyMatch,Manan Lalit,lalit@mpi-cbg.de,BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'scikit-image', 'scikit-learn', 'tqdm', 'simpleitk', 'napari[all]', 'pandas', 'pytest']",>=3.6,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PlatyMatch.EstimateTransform,EstimateTransform,platymatch._dock_widget:EstimateTransform,PlatyMatch.EvaluateMetrics,EvaluateMetrics,platymatch._dock_widget:EvaluateMetrics,,,,PlatyMatch.DetectNuclei,DetectNuclei,False,PlatyMatch.EstimateTransform,EstimateTransform,False,PlatyMatch.EvaluateMetrics,EvaluateMetrics,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +443,popidd-io,0.0.1,POPIDD IO,A simple plugin to read digital pathology images and annotations,Ferran Cardoso Rodriguez," GNU GENERAL PUBLIC LICENSE Version 3, 29 June 2007 @@ -45168,8 +47314,8 @@ may consider it more useful to permit linking proprietary applications with the library. If this is what you want to do, use the GNU Lesser General Public License instead of this License. But first, please read . -","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['magicgui', 'qtpy', 'scikit-image', 'napari', 'numpy', 'zarr', 'dask', 'pathlib', 'tifffile', 'imagecodecs', 'geopandas', 'pyarrow', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""', 'pre-commit; extra == ""testing""']",>=3.9,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",popidd-io.wLoadImage,Image loader widget,popidd_io:wLoadImage,popidd-io.wLoadAnno,Annotation loader widget,popidd_io:wLoadAnno,popidd-io.get_anno_reader,Load annotations with POPIDD Reader,popidd_io._reader:get_anno_reader,popidd-io.wLoadImage,Image Loader,False,popidd-io.wLoadAnno,Annotation Loader,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -422,PoseR-napari,0.0.1b3,PoseR,A deep learning toolbox for decoding animal behaviour,Pierce Mullen,BSD-3-Clause,https://github.com/pnm4sfix/PoseR,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,PoseR-napari.make_qwidget,Make Poser Widget,poser._widget:PoserWidget,,,,2.1,PoseR-napari,0.0.1b3,,A deep learning toolbox for decoding animal behaviour,"# PoseR +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['magicgui', 'qtpy', 'scikit-image', 'napari', 'numpy', 'zarr', 'dask', 'pathlib', 'tifffile', 'imagecodecs', 'geopandas', 'pyarrow', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""', 'pre-commit; extra == ""testing""']",>=3.9,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",popidd-io.wLoadImage,Image loader widget,popidd_io:wLoadImage,popidd-io.wLoadAnno,Annotation loader widget,popidd_io:wLoadAnno,popidd-io.get_anno_reader,Load annotations with POPIDD Reader,popidd_io._reader:get_anno_reader,popidd-io.wLoadImage,Image Loader,False,popidd-io.wLoadAnno,Annotation Loader,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +444,PoseR-napari,0.0.1b4,PoseR,A deep learning toolbox for decoding animal behaviour,Pierce Mullen,BSD-3-Clause,https://github.com/pnm4sfix/PoseR,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,PoseR-napari.make_qwidget,Make Poser Widget,poser._widget:PoserWidget,,,,2.1,PoseR-napari,0.0.1b4,,A deep learning toolbox for decoding animal behaviour,"# PoseR [![License BSD-3](https://img.shields.io/pypi/l/PoseR.svg?color=green)](https://github.com/pnm4sfix/PoseR/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/PoseR-napari.svg?color=green)](https://pypi.org/project/PoseR-napari) @@ -45215,10 +47361,11 @@ For GPU: For CPU only version: conda install pytorch torchvision torchaudio cpuonly -c pytorch - + Install napari: - pip install napari[""all""] + pip install napari[all]==0.4.14 npe2==0.6.2 pydantic==1.10.4 + You can install `PoseR` via [pip]: @@ -45231,6 +47378,10 @@ To install latest development version : pip install git+https://github.com/pnm4sfix/PoseR.git +## Quick start + +https://github.com/pnm4sfix/PoseR/blob/generalise-species/docs/QuickStart.md + ## Contributing Contributions are very welcome. Tests can be run with [tox], please ensure @@ -45262,8 +47413,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/pnm4sfix/PoseR,Pierce Mullen,pnm1@st-andrews.ac.uk,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'napari', 'napari-video', 'napari-plot', 'tables', 'imageio-ffmpeg (==0.4.8)', 'pytorch-lightning', 'test-tube', 'scikit-learn', 'matplotlib', 'numba', 'networkx', 'seaborn', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.10,"['Bug Tracker, https://github.com/pnm4sfix/PoseR/issues', 'Documentation, https://github.com/pnm4sfix/PoseR#README.md', 'Source Code, https://github.com/pnm4sfix/PoseR', 'User Support, https://github.com/pnm4sfix/PoseR/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PoseR-napari.make_hparams,Make hparams,poser._loader:HyperParams,PoseR-napari.make_dataset,Make dataset,poser._loader:ZebData,,,,PoseR-napari.make_qwidget,PoseR,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -423,psfmodels,0.3.3,psfmodels,Scalar and vectorial models of the microscope point spread function (PSF).,Talley Lambert,GPL-3.0,https://github.com/tlambert03/psfmodels,62c6a2d6034306cd82ca98d3,['conda'],,https://github.com/tlambert03/psfmodels,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/psfmodels,http://api.anaconda.org/packages/conda-forge/psfmodels,http://anaconda.org/conda-forge/psfmodels,"['0.3.2', '0.3.3']",0.3.3,,"['linux-64', 'osx-64', 'win-64']",75.0,,"['py310h7c64c84_1', 'py310h7c64c84_2', 'py310h7c64c84_3', 'py310ha51cec0_3', 'py310ha876b58_0', 'py310ha907192_1', 'py310hb037e20_1', 'py310hb037e20_2', 'py310hc088e81_1', 'py310hc088e81_2', 'py310hcf51aa5_0', 'py310hcf51aa5_1', 'py310hcf51aa5_3', 'py310heada3b3_0', 'py310heada3b3_1', 'py311h0482ae9_3', 'py311h2178d3a_3', 'py311h554ce73_0', 'py311h554ce73_1', 'py311h554ce73_3', 'py311h58959fd_1', 'py311h64516f0_0', 'py311h64516f0_1', 'py311h825570c_0', 'py312h5b9907d_1', 'py312h61157c3_1', 'py312ha2fc93b_1', 'py37h237e563_0', 'py37h237e563_1', 'py37h237e563_2', 'py37h743671a_0', 'py37h743671a_1', 'py37h743671a_2', 'py37he59b5a6_0', 'py37he59b5a6_1', 'py37he59b5a6_2', 'py38h260fa80_2', 'py38h28851e7_2', 'py38h4e180cd_0', 'py38h4e180cd_1', 'py38h4e180cd_2', 'py38h4e180cd_3', 'py38h5af2fcc_0', 'py38h6819d5e_0', 'py38h6819d5e_1', 'py38h6819d5e_3', 'py38h77a45d2_1', 'py38h9f7b399_0', 'py38hba7cd1d_0', 'py38hd105f46_0', 'py38hd105f46_1', 'py38hd105f46_2', 'py38hd873226_2', 'py38hd873226_3', 'py38hea7a1ff_3', 'py38heae2fcb_0', 'py38heae2fcb_3', 'py38hf7d7397_0', 'py38hf7d7397_1', 'py38hf88e712_0', 'py38hf88e712_1', 'py38hf88e712_2', 'py38hfb6b360_3', 'py39h0770965_0', 'py39h0770965_1', 'py39h0770965_3', 'py39h0f24028_0', 'py39h0f24028_1', 'py39h0f24028_3', 'py39h29e5701_1', 'py39h407aec2_3', 'py39h44f8f84_0', 'py39h44f8f84_1', 'py39h44f8f84_2', 'py39h4d55f98_0', 'py39h4d55f98_1', 'py39h4e59b99_2', 'py39h4e59b99_3', 'py39h81dc9ce_0', 'py39h8ca32bb_2', 'py39h98d8ec6_0', 'py39h992a1cd_0', 'py39h992a1cd_1', 'py39ha783587_1', 'py39ha791e8c_0', 'py39ha791e8c_1', 'py39ha791e8c_2', 'py39ha791e8c_3', 'py39hb4d6630_3', 'py39hc6639ae_0', 'py39hc6639ae_1', 'py39hc6639ae_2', 'py39hcfd2150_2']",0.3.2,conda-forge/psfmodels/0.3.2,1.0,0.0,2022-07-07 09:09:39.933000+00:00,2023-10-07 05:31:11.721000+00:00,conda,linux-64/psfmodels-0.3.2-py38h4e180cd_0.tar.bz2,0.0,GPL-3.0-or-later,False,,"['libgcc-ng >=12', 'libstdcxx-ng >=12', 'numpy', 'pybind11-abi 4', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'scipy >=0.14.0', 'typing-extensions']",linux-64,1657184949741.0,x86_64-any-linux,py38h4e180cd_0,2022-07-07 09:09:40.591000+00:00,5bae6b359d4db2a6aa585541c89890a7,None,128234.0,conda-forge/psfmodels/0.3.2/linux-64/psfmodels-0.3.2-py38h4e180cd_0.tar.bz2,//api.anaconda.org/download/conda-forge/psfmodels/0.3.2/linux-64/psfmodels-0.3.2-py38h4e180cd_0.tar.bz2,conda,0.3.2,conda-forge,['main'],public,,0.2.1,psfmodels.make_psf,Generate 3D Point Spread Function,psfmodels._napari:make_psf,,,,2.1,psfmodels,0.3.3,,Scalar and vectorial models of the microscope point spread function (PSF).,"# psfmodels +",text/markdown,https://github.com/pnm4sfix/PoseR,Pierce Mullen,pnm1@st-andrews.ac.uk,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['napari[all]==0.4.14', 'npe2==0.6.2', 'pydantic==1.10.4', 'numpy==1.23.5', 'magicgui', 'qtpy', 'napari-video', 'napari-plot==0.1.5', 'tables', 'imageio-ffmpeg==0.4.8', 'pytorch-lightning', 'test-tube', 'scikit-learn', 'matplotlib', 'numba', 'networkx', 'seaborn', 'ultralytics', 'torcheval==0.0.7', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.10,"['Bug Tracker, https://github.com/pnm4sfix/PoseR/issues', 'Documentation, https://github.com/pnm4sfix/PoseR#README.md', 'Source Code, https://github.com/pnm4sfix/PoseR', 'User Support, https://github.com/pnm4sfix/PoseR/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,PoseR-napari.make_hparams,Make hparams,poser._loader:HyperParams,PoseR-napari.make_dataset,Make dataset,poser._loader:ZebData,,,,PoseR-napari.make_qwidget,PoseR,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +445,psfmodels,0.3.3,psfmodels,Scalar and vectorial models of the microscope point spread function (PSF).,Talley Lambert,GPL-3.0,https://github.com/tlambert03/psfmodels,62c6a2d6034306cd82ca98d3,['conda'],,https://github.com/tlambert03/psfmodels,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/psfmodels,http://api.anaconda.org/packages/conda-forge/psfmodels,http://anaconda.org/conda-forge/psfmodels,"['0.3.2', '0.3.3']",0.3.3,,"['linux-64', 'osx-64', 'win-64']",121.0,,"['py310h27e020d_2', 'py310h7c64c84_1', 'py310h7c64c84_2', 'py310h7c64c84_3', 'py310ha51cec0_3', 'py310ha876b58_0', 'py310ha907192_1', 'py310hac8a80f_2', 'py310hb037e20_1', 'py310hb037e20_2', 'py310hbcb165e_2', 'py310hc088e81_1', 'py310hc088e81_2', 'py310hcf51aa5_0', 'py310hcf51aa5_1', 'py310hcf51aa5_3', 'py310heada3b3_0', 'py310heada3b3_1', 'py311h0482ae9_3', 'py311h2178d3a_3', 'py311h3ad1b4e_2', 'py311h3b8ed35_2', 'py311h554ce73_0', 'py311h554ce73_1', 'py311h554ce73_3', 'py311h58959fd_1', 'py311h64516f0_0', 'py311h64516f0_1', 'py311h825570c_0', 'py311h9cc37c9_2', 'py312h201425c_2', 'py312h5b9907d_1', 'py312h61157c3_1', 'py312ha2fc93b_1', 'py312hab2d229_2', 'py312hc594dea_2', 'py313ha10ce33_2', 'py313hd4e9a19_2', 'py313he6f203d_2', 'py37h237e563_0', 'py37h237e563_1', 'py37h237e563_2', 'py37h743671a_0', 'py37h743671a_1', 'py37h743671a_2', 'py37he59b5a6_0', 'py37he59b5a6_1', 'py37he59b5a6_2', 'py38h260fa80_2', 'py38h28851e7_2', 'py38h4e180cd_0', 'py38h4e180cd_1', 'py38h4e180cd_2', 'py38h4e180cd_3', 'py38h5af2fcc_0', 'py38h6819d5e_0', 'py38h6819d5e_1', 'py38h6819d5e_3', 'py38h77a45d2_1', 'py38h9f7b399_0', 'py38hba7cd1d_0', 'py38hd105f46_0', 'py38hd105f46_1', 'py38hd105f46_2', 'py38hd873226_2', 'py38hd873226_3', 'py38hea7a1ff_3', 'py38heae2fcb_0', 'py38heae2fcb_3', 'py38hf7d7397_0', 'py38hf7d7397_1', 'py38hf88e712_0', 'py38hf88e712_1', 'py38hf88e712_2', 'py38hfb6b360_3', 'py39h0770965_0', 'py39h0770965_1', 'py39h0770965_3', 'py39h0f24028_0', 'py39h0f24028_1', 'py39h0f24028_3', 'py39h29e5701_1', 'py39h3850c89_2', 'py39h407aec2_3', 'py39h44f8f84_0', 'py39h44f8f84_1', 'py39h44f8f84_2', 'py39h4d55f98_0', 'py39h4d55f98_1', 'py39h4e59b99_2', 'py39h4e59b99_3', 'py39h752857e_2', 'py39h81dc9ce_0', 'py39h8ca32bb_2', 'py39h98d8ec6_0', 'py39h992a1cd_0', 'py39h992a1cd_1', 'py39ha44065d_2', 'py39ha783587_1', 'py39ha791e8c_0', 'py39ha791e8c_1', 'py39ha791e8c_2', 'py39ha791e8c_3', 'py39hb4d6630_3', 'py39hc6639ae_0', 'py39hc6639ae_1', 'py39hc6639ae_2', 'py39hcfd2150_2']",0.3.2,conda-forge/psfmodels/0.3.2,1.0,0.0,2022-07-07 09:09:39.933000+00:00,2024-11-21 13:40:16.003000+00:00,conda,linux-64/psfmodels-0.3.2-py38h4e180cd_0.tar.bz2,0.0,GPL-3.0-or-later,False,,"['libgcc-ng >=12', 'libstdcxx-ng >=12', 'numpy', 'pybind11-abi 4', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'scipy >=0.14.0', 'typing-extensions']",linux-64,1657184949741.0,x86_64-any-linux,py38h4e180cd_0,2022-07-07 09:09:40.591000+00:00,5bae6b359d4db2a6aa585541c89890a7,None,128234.0,conda-forge/psfmodels/0.3.2/linux-64/psfmodels-0.3.2-py38h4e180cd_0.tar.bz2,//api.anaconda.org/download/conda-forge/psfmodels/0.3.2/linux-64/psfmodels-0.3.2-py38h4e180cd_0.tar.bz2,conda,0.3.2,conda-forge,['main'],public,,0.2.1,psfmodels.make_psf,Generate 3D Point Spread Function,psfmodels._napari:make_psf,,,,2.1,psfmodels,0.3.3,,Scalar and vectorial models of the microscope point spread function (PSF).,"# psfmodels [![PyPI](https://img.shields.io/pypi/v/psfmodels.svg?color=green)](https://pypi.org/project/psfmodels) [![Python @@ -45404,8 +47555,8 @@ system PSF (excitation x detection) as might be observed on a light sheet microscope (currently, only strictly orthogonal illumination and detection are supported). See the [lightsheet.ipynb](notebooks/lightsheet.ipynb) Jupyter notebook for examples. -",text/markdown,https://github.com/tlambert03/psfmodels,Talley Lambert,talley.lambert@gmail.com,GPL-3.0,"['Development Status :: 3 - Alpha', 'Framework :: napari', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)', 'Natural Language :: English', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10']","['numpy', 'scipy (>=0.14.0)', 'typing-extensions', ""black ; extra == 'dev'"", ""flake8 ; extra == 'dev'"", ""flake8-docstrings ; extra == 'dev'"", ""flake8-typing-imports ; extra == 'dev'"", ""ipython ; extra == 'dev'"", ""isort ; extra == 'dev'"", ""mypy ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""pydocstyle ; extra == 'dev'"", ""pytest ; extra == 'dev'"", ""pytest-cov ; extra == 'dev'"", ""tox ; extra == 'dev'"", ""tox-conda ; extra == 'dev'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""jax ; extra == 'testing'"", 'magicgui ; (platform_system != ""Linux"") and extra == \'testing\'', 'qtpy ; (platform_system != ""Linux"") and extra == \'testing\'', 'pyside2 ; (platform_system != ""Linux"" and python_version < ""3.11"") and extra == \'testing\'']",>=3.7,"['Source Code, https://github.com/tlambert03/psfmodels']","['dev', 'testing']",False,0.3.3,conda-forge/psfmodels/0.3.3,,,,,conda,linux-64/psfmodels-0.3.2-py39ha791e8c_0.tar.bz2,0.0,GPL-3.0-or-later,False,,"['libgcc-ng >=12', 'libstdcxx-ng >=12', 'numpy', 'pybind11-abi 4', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'scipy >=0.14.0', 'typing-extensions']",py39ha791e8c_0,1657184949788.0,x86_64-any-linux,linux-64,2022-07-07 09:09:52.884000+00:00,8a5c89c8d75634f3b5fa3771ee5617cc,None,129123.0,conda-forge/psfmodels/0.3.2/linux-64/psfmodels-0.3.2-py39ha791e8c_0.tar.bz2,//api.anaconda.org/download/conda-forge/psfmodels/0.3.2/linux-64/psfmodels-0.3.2-py39ha791e8c_0.tar.bz2,conda,0.3.2,conda-forge,['main'],conda,linux-64/psfmodels-0.3.2-py37h237e563_0.tar.bz2,0.0,GPL-3.0-or-later,False,,"['libgcc-ng >=12', 'libstdcxx-ng >=12', 'numpy', 'pybind11-abi 4', 'python >=3.7,<3.8.0a0', 'python_abi 3.7.* *_cp37m', 'scipy >=0.14.0', 'typing-extensions']",linux-64,1657185012127.0,x86_64-any-linux,py37h237e563_0,2022-07-07 09:10:47.278000+00:00,db80cf2afb74998219cfc0668454d497,None,127192.0,conda-forge/psfmodels/0.3.2/linux-64/psfmodels-0.3.2-py37h237e563_0.tar.bz2,//api.anaconda.org/download/conda-forge/psfmodels/0.3.2/linux-64/psfmodels-0.3.2-py37h237e563_0.tar.bz2,conda,0.3.2,conda-forge,['main'],conda,win-64/psfmodels-0.3.2-py38hf88e712_0.tar.bz2,x86_64-any-win32,False,win-64,py38hf88e712_0,0.0,"['numpy', 'pybind11-abi 4', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'scipy >=0.14.0', 'typing-extensions', 'vc >=14.1,<15', 'vs2015_runtime >=14.16.27033']",GPL-3.0-or-later,,1657185195964.0,2022-07-07 09:15:30.683000+00:00,ce5f4abca22483a1387b985b8f65796d,None,127428.0,conda-forge/psfmodels/0.3.2/win-64/psfmodels-0.3.2-py38hf88e712_0.tar.bz2,//api.anaconda.org/download/conda-forge/psfmodels/0.3.2/win-64/psfmodels-0.3.2-py38hf88e712_0.tar.bz2,conda,0.3.2,conda-forge,['main'],,,,,,,,,,,psfmodels.make_psf,PSF Generator,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,conda,win-64/psfmodels-0.3.2-py39hc6639ae_0.tar.bz2,0.0,GPL-3.0-or-later,False,,"['numpy', 'pybind11-abi 4', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'scipy >=0.14.0', 'typing-extensions', 'vc >=14.1,<15', 'vs2015_runtime >=14.16.27033']",win-64,1657185203541.0,x86_64-any-win32,py39hc6639ae_0,2022-07-07 09:15:41.376000+00:00,82e2200cfb034f236a254d3251c87ef7,None,127598.0,conda-forge/psfmodels/0.3.2/win-64/psfmodels-0.3.2-py39hc6639ae_0.tar.bz2,//api.anaconda.org/download/conda-forge/psfmodels/0.3.2/win-64/psfmodels-0.3.2-py39hc6639ae_0.tar.bz2,conda,0.3.2,conda-forge,['main'],conda,osx-64/psfmodels-0.3.2-py37he59b5a6_0.tar.bz2,0.0,GPL-3.0-or-later,False,,"['libcxx >=13.0.1', 'numpy', 'pybind11-abi 4', 'python >=3.7,<3.8.0a0', 'python_abi 3.7.* *_cp37m', 'scipy >=0.14.0', 'typing-extensions']",osx-64,1657185303227.0,x86_64-any-darwin,py37he59b5a6_0,2022-07-07 09:15:53.427000+00:00,fd259501c133f66e596fb706b4812f22,None,133537.0,conda-forge/psfmodels/0.3.2/osx-64/psfmodels-0.3.2-py37he59b5a6_0.tar.bz2,//api.anaconda.org/download/conda-forge/psfmodels/0.3.2/osx-64/psfmodels-0.3.2-py37he59b5a6_0.tar.bz2,conda,0.3.2,conda-forge,['main'],conda,osx-64/psfmodels-0.3.2-py38hd105f46_0.tar.bz2,x86_64-any-darwin,False,osx-64,py38hd105f46_0,0.0,"['libcxx >=13.0.1', 'numpy', 'pybind11-abi 4', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'scipy >=0.14.0', 'typing-extensions']",GPL-3.0-or-later,,1657185312681.0,2022-07-07 09:15:58.937000+00:00,46bebe94568547bfeabeda6470cea99d,None,121755.0,conda-forge/psfmodels/0.3.2/osx-64/psfmodels-0.3.2-py38hd105f46_0.tar.bz2,//api.anaconda.org/download/conda-forge/psfmodels/0.3.2/osx-64/psfmodels-0.3.2-py38hd105f46_0.tar.bz2,conda,0.3.2,conda-forge,['main'],,,,,,,,,,,conda,osx-64/psfmodels-0.3.2-py39h44f8f84_0.tar.bz2,0.0,GPL-3.0-or-later,False,,"['libcxx >=13.0.1', 'numpy', 'pybind11-abi 4', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'scipy >=0.14.0', 'typing-extensions']",osx-64,1657185300531.0,x86_64-any-darwin,py39h44f8f84_0,2022-07-07 09:16:02.621000+00:00,e29df7b5063233a26705f7aee98321b6,None,121912.0,conda-forge/psfmodels/0.3.2/osx-64/psfmodels-0.3.2-py39h44f8f84_0.tar.bz2,//api.anaconda.org/download/conda-forge/psfmodels/0.3.2/osx-64/psfmodels-0.3.2-py39h44f8f84_0.tar.bz2,conda,0.3.2,conda-forge,['main'],conda,win-64/psfmodels-0.3.2-py37h743671a_0.tar.bz2,x86_64-any-win32,False,win-64,py37h743671a_0,0.0,"['numpy', 'pybind11-abi 4', 'python >=3.7,<3.8.0a0', 'python_abi 3.7.* *_cp37m', 'scipy >=0.14.0', 'typing-extensions', 'vc >=14.1,<15', 'vs2015_runtime >=14.16.27033']",GPL-3.0-or-later,,1657185364703.0,2022-07-07 09:18:13.072000+00:00,38cc36c8d7e446253c2a89a784997b0f,None,127991.0,conda-forge/psfmodels/0.3.2/win-64/psfmodels-0.3.2-py37h743671a_0.tar.bz2,//api.anaconda.org/download/conda-forge/psfmodels/0.3.2/win-64/psfmodels-0.3.2-py37h743671a_0.tar.bz2,conda,0.3.2,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,conda,linux-64/psfmodels-0.3.2-py310h7c64c84_1.tar.bz2,x86_64-any-linux,False,linux-64,py310h7c64c84_1,1.0,"['libgcc-ng >=12', 'libstdcxx-ng >=12', 'numpy', 'pybind11-abi 4', 'python >=3.10,<3.11.0a0', 'python_abi 3.10.* *_cp310', 'scipy >=0.14.0', 'typing-extensions']",GPL-3.0-or-later,,1657196939221.0,2022-07-07 12:29:29.508000+00:00,73a1b2e5b71bfa27b2e15836f89e149a,None,129028.0,conda-forge/psfmodels/0.3.2/linux-64/psfmodels-0.3.2-py310h7c64c84_1.tar.bz2,//api.anaconda.org/download/conda-forge/psfmodels/0.3.2/linux-64/psfmodels-0.3.2-py310h7c64c84_1.tar.bz2,conda,0.3.2,conda-forge,['main'],,,conda,linux-64/psfmodels-0.3.2-py37h237e563_1.tar.bz2,x86_64-any-linux,False,linux-64,py37h237e563_1,1.0,"['libgcc-ng >=12', 'libstdcxx-ng >=12', 'numpy', 'pybind11-abi 4', 'python >=3.7,<3.8.0a0', 'python_abi 3.7.* *_cp37m', 'scipy >=0.14.0', 'typing-extensions']",GPL-3.0-or-later,1657196950195.0,2022-07-07 12:29:39.571000+00:00,6c6cf9e9498f91f07ff717324ae5e973,None,127069.0,conda-forge/psfmodels/0.3.2/linux-64/psfmodels-0.3.2-py37h237e563_1.tar.bz2,//api.anaconda.org/download/conda-forge/psfmodels/0.3.2/linux-64/psfmodels-0.3.2-py37h237e563_1.tar.bz2,conda,0.3.2,conda-forge,['main'],conda,linux-64/psfmodels-0.3.2-py39ha791e8c_1.tar.bz2,x86_64-any-linux,False,linux-64,py39ha791e8c_1,1.0,"['libgcc-ng >=12', 'libstdcxx-ng >=12', 'numpy', 'pybind11-abi 4', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'scipy >=0.14.0', 'typing-extensions']",GPL-3.0-or-later,1657196950619.0,2022-07-07 12:29:44.390000+00:00,cc6f3a1cced53f415fa94bc9398a8f9f,None,129253.0,conda-forge/psfmodels/0.3.2/linux-64/psfmodels-0.3.2-py39ha791e8c_1.tar.bz2,//api.anaconda.org/download/conda-forge/psfmodels/0.3.2/linux-64/psfmodels-0.3.2-py39ha791e8c_1.tar.bz2,conda,0.3.2,conda-forge,['main'],conda,linux-64/psfmodels-0.3.2-py38h4e180cd_1.tar.bz2,x86_64-any-linux,False,linux-64,py38h4e180cd_1,1.0,"['libgcc-ng >=12', 'libstdcxx-ng >=12', 'numpy', 'pybind11-abi 4', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'scipy >=0.14.0', 'typing-extensions']",GPL-3.0-or-later,1657197001527.0,2022-07-07 12:30:42.901000+00:00,343b75f7845ff041156bc1a3b4125998,None,128084.0,conda-forge/psfmodels/0.3.2/linux-64/psfmodels-0.3.2-py38h4e180cd_1.tar.bz2,//api.anaconda.org/download/conda-forge/psfmodels/0.3.2/linux-64/psfmodels-0.3.2-py38h4e180cd_1.tar.bz2,conda,0.3.2,conda-forge,['main'],,, -424,pssr,2.1.0.post1,PSSR2,Point-Scanning Super-Resolution 2,Hayden Stites,MIT,https://github.com/ucsdmanorlab/PSSR2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,pssr.napari.train,Open Train Widget,pssr.napari:TrainWidget,,,,2.1,pssr,2.1.0.post1,,Point-Scanning Super-Resolution 2,"# Point-Scanning Super-Resolution 2 (**PSSR2**) +",text/markdown,https://github.com/tlambert03/psfmodels,Talley Lambert,talley.lambert@gmail.com,GPL-3.0,"['Development Status :: 3 - Alpha', 'Framework :: napari', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)', 'Natural Language :: English', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10']","['numpy', 'scipy (>=0.14.0)', 'typing-extensions', ""black ; extra == 'dev'"", ""flake8 ; extra == 'dev'"", ""flake8-docstrings ; extra == 'dev'"", ""flake8-typing-imports ; extra == 'dev'"", ""ipython ; extra == 'dev'"", ""isort ; extra == 'dev'"", ""mypy ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""pydocstyle ; extra == 'dev'"", ""pytest ; extra == 'dev'"", ""pytest-cov ; extra == 'dev'"", ""tox ; extra == 'dev'"", ""tox-conda ; extra == 'dev'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""jax ; extra == 'testing'"", 'magicgui ; (platform_system != ""Linux"") and extra == \'testing\'', 'qtpy ; (platform_system != ""Linux"") and extra == \'testing\'', 'pyside2 ; (platform_system != ""Linux"" and python_version < ""3.11"") and extra == \'testing\'']",>=3.7,"['Source Code, https://github.com/tlambert03/psfmodels']","['dev', 'testing']",False,0.3.3,conda-forge/psfmodels/0.3.3,,,,,conda,linux-64/psfmodels-0.3.2-py39ha791e8c_0.tar.bz2,0.0,GPL-3.0-or-later,False,,"['libgcc-ng >=12', 'libstdcxx-ng >=12', 'numpy', 'pybind11-abi 4', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'scipy >=0.14.0', 'typing-extensions']",py39ha791e8c_0,1657184949788.0,x86_64-any-linux,linux-64,2022-07-07 09:09:52.884000+00:00,8a5c89c8d75634f3b5fa3771ee5617cc,None,129123.0,conda-forge/psfmodels/0.3.2/linux-64/psfmodels-0.3.2-py39ha791e8c_0.tar.bz2,//api.anaconda.org/download/conda-forge/psfmodels/0.3.2/linux-64/psfmodels-0.3.2-py39ha791e8c_0.tar.bz2,conda,0.3.2,conda-forge,['main'],conda,linux-64/psfmodels-0.3.2-py37h237e563_0.tar.bz2,0.0,GPL-3.0-or-later,False,,"['libgcc-ng >=12', 'libstdcxx-ng >=12', 'numpy', 'pybind11-abi 4', 'python >=3.7,<3.8.0a0', 'python_abi 3.7.* *_cp37m', 'scipy >=0.14.0', 'typing-extensions']",linux-64,1657185012127.0,x86_64-any-linux,py37h237e563_0,2022-07-07 09:10:47.278000+00:00,db80cf2afb74998219cfc0668454d497,None,127192.0,conda-forge/psfmodels/0.3.2/linux-64/psfmodels-0.3.2-py37h237e563_0.tar.bz2,//api.anaconda.org/download/conda-forge/psfmodels/0.3.2/linux-64/psfmodels-0.3.2-py37h237e563_0.tar.bz2,conda,0.3.2,conda-forge,['main'],conda,win-64/psfmodels-0.3.2-py38hf88e712_0.tar.bz2,x86_64-any-win32,False,win-64,py38hf88e712_0,0.0,"['numpy', 'pybind11-abi 4', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'scipy >=0.14.0', 'typing-extensions', 'vc >=14.1,<15', 'vs2015_runtime >=14.16.27033']",GPL-3.0-or-later,,1657185195964.0,2022-07-07 09:15:30.683000+00:00,ce5f4abca22483a1387b985b8f65796d,None,127428.0,conda-forge/psfmodels/0.3.2/win-64/psfmodels-0.3.2-py38hf88e712_0.tar.bz2,//api.anaconda.org/download/conda-forge/psfmodels/0.3.2/win-64/psfmodels-0.3.2-py38hf88e712_0.tar.bz2,conda,0.3.2,conda-forge,['main'],,,,,,,,,,,psfmodels.make_psf,PSF Generator,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,conda,win-64/psfmodels-0.3.2-py39hc6639ae_0.tar.bz2,0.0,GPL-3.0-or-later,False,,"['numpy', 'pybind11-abi 4', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'scipy >=0.14.0', 'typing-extensions', 'vc >=14.1,<15', 'vs2015_runtime >=14.16.27033']",win-64,1657185203541.0,x86_64-any-win32,py39hc6639ae_0,2022-07-07 09:15:41.376000+00:00,82e2200cfb034f236a254d3251c87ef7,None,127598.0,conda-forge/psfmodels/0.3.2/win-64/psfmodels-0.3.2-py39hc6639ae_0.tar.bz2,//api.anaconda.org/download/conda-forge/psfmodels/0.3.2/win-64/psfmodels-0.3.2-py39hc6639ae_0.tar.bz2,conda,0.3.2,conda-forge,['main'],conda,osx-64/psfmodels-0.3.2-py37he59b5a6_0.tar.bz2,0.0,GPL-3.0-or-later,False,,"['libcxx >=13.0.1', 'numpy', 'pybind11-abi 4', 'python >=3.7,<3.8.0a0', 'python_abi 3.7.* *_cp37m', 'scipy >=0.14.0', 'typing-extensions']",osx-64,1657185303227.0,x86_64-any-darwin,py37he59b5a6_0,2022-07-07 09:15:53.427000+00:00,fd259501c133f66e596fb706b4812f22,None,133537.0,conda-forge/psfmodels/0.3.2/osx-64/psfmodels-0.3.2-py37he59b5a6_0.tar.bz2,//api.anaconda.org/download/conda-forge/psfmodels/0.3.2/osx-64/psfmodels-0.3.2-py37he59b5a6_0.tar.bz2,conda,0.3.2,conda-forge,['main'],conda,osx-64/psfmodels-0.3.2-py38hd105f46_0.tar.bz2,x86_64-any-darwin,False,osx-64,py38hd105f46_0,0.0,"['libcxx >=13.0.1', 'numpy', 'pybind11-abi 4', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'scipy >=0.14.0', 'typing-extensions']",GPL-3.0-or-later,,1657185312681.0,2022-07-07 09:15:58.937000+00:00,46bebe94568547bfeabeda6470cea99d,None,121755.0,conda-forge/psfmodels/0.3.2/osx-64/psfmodels-0.3.2-py38hd105f46_0.tar.bz2,//api.anaconda.org/download/conda-forge/psfmodels/0.3.2/osx-64/psfmodels-0.3.2-py38hd105f46_0.tar.bz2,conda,0.3.2,conda-forge,['main'],,,,,,,,,,,conda,osx-64/psfmodels-0.3.2-py39h44f8f84_0.tar.bz2,0.0,GPL-3.0-or-later,False,,"['libcxx >=13.0.1', 'numpy', 'pybind11-abi 4', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'scipy >=0.14.0', 'typing-extensions']",osx-64,1657185300531.0,x86_64-any-darwin,py39h44f8f84_0,2022-07-07 09:16:02.621000+00:00,e29df7b5063233a26705f7aee98321b6,None,121912.0,conda-forge/psfmodels/0.3.2/osx-64/psfmodels-0.3.2-py39h44f8f84_0.tar.bz2,//api.anaconda.org/download/conda-forge/psfmodels/0.3.2/osx-64/psfmodels-0.3.2-py39h44f8f84_0.tar.bz2,conda,0.3.2,conda-forge,['main'],conda,win-64/psfmodels-0.3.2-py37h743671a_0.tar.bz2,x86_64-any-win32,False,win-64,py37h743671a_0,0.0,"['numpy', 'pybind11-abi 4', 'python >=3.7,<3.8.0a0', 'python_abi 3.7.* *_cp37m', 'scipy >=0.14.0', 'typing-extensions', 'vc >=14.1,<15', 'vs2015_runtime >=14.16.27033']",GPL-3.0-or-later,,1657185364703.0,2022-07-07 09:18:13.072000+00:00,38cc36c8d7e446253c2a89a784997b0f,None,127991.0,conda-forge/psfmodels/0.3.2/win-64/psfmodels-0.3.2-py37h743671a_0.tar.bz2,//api.anaconda.org/download/conda-forge/psfmodels/0.3.2/win-64/psfmodels-0.3.2-py37h743671a_0.tar.bz2,conda,0.3.2,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,conda,linux-64/psfmodels-0.3.2-py310h7c64c84_1.tar.bz2,x86_64-any-linux,False,linux-64,py310h7c64c84_1,1.0,"['libgcc-ng >=12', 'libstdcxx-ng >=12', 'numpy', 'pybind11-abi 4', 'python >=3.10,<3.11.0a0', 'python_abi 3.10.* *_cp310', 'scipy >=0.14.0', 'typing-extensions']",GPL-3.0-or-later,,1657196939221.0,2022-07-07 12:29:29.508000+00:00,73a1b2e5b71bfa27b2e15836f89e149a,None,129028.0,conda-forge/psfmodels/0.3.2/linux-64/psfmodels-0.3.2-py310h7c64c84_1.tar.bz2,//api.anaconda.org/download/conda-forge/psfmodels/0.3.2/linux-64/psfmodels-0.3.2-py310h7c64c84_1.tar.bz2,conda,0.3.2,conda-forge,['main'],conda,linux-64/psfmodels-0.3.2-py37h237e563_1.tar.bz2,x86_64-any-linux,False,linux-64,py37h237e563_1,1.0,"['libgcc-ng >=12', 'libstdcxx-ng >=12', 'numpy', 'pybind11-abi 4', 'python >=3.7,<3.8.0a0', 'python_abi 3.7.* *_cp37m', 'scipy >=0.14.0', 'typing-extensions']",GPL-3.0-or-later,,1657196950195.0,2022-07-07 12:29:39.571000+00:00,6c6cf9e9498f91f07ff717324ae5e973,None,127069.0,conda-forge/psfmodels/0.3.2/linux-64/psfmodels-0.3.2-py37h237e563_1.tar.bz2,//api.anaconda.org/download/conda-forge/psfmodels/0.3.2/linux-64/psfmodels-0.3.2-py37h237e563_1.tar.bz2,conda,0.3.2,conda-forge,['main'],,,conda,linux-64/psfmodels-0.3.2-py39ha791e8c_1.tar.bz2,x86_64-any-linux,False,linux-64,py39ha791e8c_1,1.0,"['libgcc-ng >=12', 'libstdcxx-ng >=12', 'numpy', 'pybind11-abi 4', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'scipy >=0.14.0', 'typing-extensions']",GPL-3.0-or-later,1657196950619.0,2022-07-07 12:29:44.390000+00:00,cc6f3a1cced53f415fa94bc9398a8f9f,None,129253.0,conda-forge/psfmodels/0.3.2/linux-64/psfmodels-0.3.2-py39ha791e8c_1.tar.bz2,//api.anaconda.org/download/conda-forge/psfmodels/0.3.2/linux-64/psfmodels-0.3.2-py39ha791e8c_1.tar.bz2,conda,0.3.2,conda-forge,['main'],,,conda,linux-64/psfmodels-0.3.2-py38h4e180cd_1.tar.bz2,x86_64-any-linux,False,linux-64,py38h4e180cd_1,1.0,"['libgcc-ng >=12', 'libstdcxx-ng >=12', 'numpy', 'pybind11-abi 4', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'scipy >=0.14.0', 'typing-extensions']",GPL-3.0-or-later,1657197001527.0,2022-07-07 12:30:42.901000+00:00,343b75f7845ff041156bc1a3b4125998,None,128084.0,conda-forge/psfmodels/0.3.2/linux-64/psfmodels-0.3.2-py38h4e180cd_1.tar.bz2,//api.anaconda.org/download/conda-forge/psfmodels/0.3.2/linux-64/psfmodels-0.3.2-py38h4e180cd_1.tar.bz2,conda,0.3.2,conda-forge,['main'],conda,osx-64/psfmodels-0.3.2-py38hd105f46_1.tar.bz2,x86_64-any-darwin,False,osx-64,py38hd105f46_1,1.0,"['libcxx >=13.0.1', 'numpy', 'pybind11-abi 4', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'scipy >=0.14.0', 'typing-extensions']",GPL-3.0-or-later,2022-07-07 12:31:25.687000+00:00,8834740ffd8cfe4d146b3f19b6f5d579,None,121748.0,conda-forge/psfmodels/0.3.2/osx-64/psfmodels-0.3.2-py38hd105f46_1.tar.bz2,//api.anaconda.org/download/conda-forge/psfmodels/0.3.2/osx-64/psfmodels-0.3.2-py38hd105f46_1.tar.bz2,conda,0.3.2,conda-forge,['main'],,, +446,pssr,2.1.1,PSSR2,Point-Scanning Super-Resolution 2,Hayden Stites,MIT,https://github.com/ucsdmanorlab/PSSR2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,pssr.napari.train,Open Train Widget,pssr.napari:TrainWidget,,,,2.1,pssr,2.1.1,,Point-Scanning Super-Resolution 2,"# Point-Scanning Super-Resolution 2 (**PSSR2**) **PSSR2** is a user-friendly [PyTorch](https://pytorch.org)-based workflow for super-resolution tasks using microscopy images. This is the official reimplementation and extention of the methods described in the original paper: [Deep learning-based point-scanning super-resolution imaging](https://www.nature.com/articles/s41592-021-01080-z). @@ -45422,8 +47573,8 @@ If you experience any bugs, unexpected behaviors, or have any suggestions, make Sample data and pretrained models can currently be found [here](https://drive.google.com/drive/folders/1q6a2Z6gRG3Vnx8BM3OW7Y35myw-0f0_H). -",text/markdown,https://github.com/ucsdmanorlab/PSSR2,Hayden Stites,,MIT,"['Development Status :: 5 - Production/Stable', 'Environment :: GPU :: NVIDIA CUDA', 'Framework :: napari', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Documentation :: Sphinx', 'Topic :: Scientific/Engineering :: Artificial Intelligence', 'Topic :: Scientific/Engineering :: Image Processing']","['czifile (>=2019.7.2,<2020.0.0)', 'napari (>=0.4.13,<0.5.0) ; extra == ""napari""', 'numpy (>=1.22.4,<2.0.0)', 'pillow (>=9.1.0)', 'psutil (>=5.0.0)', 'pytorch-msssim (>=1.0.0,<2.0.0)', 'scikit-image (>=0.18.0)', 'scikit-optimize (>=0.9.0)', 'tifffile (>=2019.7.26)', 'timm (>=0.8.0)', 'torch (>=1.11.0)', 'tqdm (>=4.0.0,<5.0.0)']",">=3.9,<4.0","['Documentation, https://ucsdmanorlab.github.io/PSSR2', 'Repository, https://github.com/ucsdmanorlab/PSSR2']",['napari'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,pssr.napari.predict,Open Predict Widget,pssr.napari:PredictWidget,,,,,,,pssr.napari.train,Train Model,False,pssr.napari.predict,Predict Images,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -425,pycudadecon,0.5.1,pyCUDAdecon,Python wrapper for CUDA-accelerated 3D deconvolution,,MIT,,60b50a081116e579c31edd9d,['conda'],"This package provides a python wrapper and convenience functions for cudadecon, +",text/markdown,https://github.com/ucsdmanorlab/PSSR2,Hayden Stites,,MIT,"['Development Status :: 5 - Production/Stable', 'Environment :: GPU :: NVIDIA CUDA', 'Framework :: napari', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Documentation :: Sphinx', 'Topic :: Scientific/Engineering :: Artificial Intelligence', 'Topic :: Scientific/Engineering :: Image Processing']","['czifile (>=2019.7.2,<2020.0.0)', 'napari (>=0.4.13,<0.5.0) ; extra == ""napari""', 'numpy (>=1.22.4,<2.0.0)', 'pillow (>=9.1.0)', 'psutil (>=5.0.0)', 'pytorch-msssim (>=1.0.0,<2.0.0)', 'scikit-image (>=0.18.0)', 'scikit-optimize (>=0.9.0)', 'tifffile (>=2019.7.26)', 'timm (>=0.8.0)', 'torch (>=1.11.0)', 'tqdm (>=4.0.0,<5.0.0)']",">=3.9,<4.0","['Documentation, https://ucsdmanorlab.github.io/PSSR2', 'Repository, https://github.com/ucsdmanorlab/PSSR2']",['napari'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,pssr.napari.predict,Open Predict Widget,pssr.napari:PredictWidget,,,,,,,pssr.napari.train,Train Model,False,pssr.napari.predict,Predict Images,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +447,pycudadecon,0.5.1,pyCUDAdecon,Python wrapper for CUDA-accelerated 3D deconvolution,,MIT,,60b50a081116e579c31edd9d,['conda'],"This package provides a python wrapper and convenience functions for cudadecon, a CUDA/C++ implementation of an accelerated Richardson Lucy Deconvolution algorithm. It is suitable for general deconvolution of 3D microscopy data, but also has functionality for stage-scanning light sheet applications such as Lattice Light Sheet. @@ -45545,8 +47696,120 @@ For examples and information on affine transforms, volume rotations, and deskewi ___ 1 D.S.C. Biggs and M. Andrews, Acceleration of iterative image restoration algorithms, Applied Optics, Vol. 36, No. 8, 1997. https://doi.org/10.1364/AO.36.001766 -",text/markdown,,,Talley Lambert ,MIT,"['Development Status :: 4 - Beta', 'Environment :: GPU :: NVIDIA CUDA', 'Framework :: napari', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: MIT License', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering']","['numpy', 'tifffile', 'typing-extensions', ""ipython; extra == 'dev'"", ""mypy; extra == 'dev'"", ""pdbpp; extra == 'dev'"", ""pre-commit; extra == 'dev'"", ""rich; extra == 'dev'"", ""ruff; extra == 'dev'"", ""furo==2022.9.29; extra == 'docs'"", ""ghp-import==2.1.0; extra == 'docs'"", ""jupyter-book==0.13.1; extra == 'docs'"", ""sphinx-autodoc-typehints==1.19.1; extra == 'docs'"", ""pytest-cov; extra == 'test'"", ""pytest>=6.0; extra == 'test'""]",>=3.8,"['Documentation, https://tlambert03.github.io/pycudadecon/', 'Source, https://github.com/tlambert03/pycudadecon', 'Tracker, https://github.com/tlambert03/pycudadecon/issues']","['dev', 'docs', 'test']",False,0.3.0,conda-forge/pycudadecon/0.3.0,0.4.0,conda-forge/pycudadecon/0.4.0,0.4.1,conda-forge/pycudadecon/0.4.1,conda,noarch/pycudadecon-0.3.0-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['cudadecon >=0.0.11', 'importlib-metadata >=1.5.0', 'numpy', 'python >=3.7', 'tifffile >=0.14.0', 'typing_extensions']",pyhd8ed1ab_0,1660170351373.0,None-any-None,noarch,2022-08-10 22:28:24.485000+00:00,0c52f2bcf0cb63682eecbbd254896a9c,None,21885.0,conda-forge/pycudadecon/0.3.0/noarch/pycudadecon-0.3.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/pycudadecon/0.3.0/noarch/pycudadecon-0.3.0-pyhd8ed1ab_0.tar.bz2,conda,0.3.0,conda-forge,['main'],conda,noarch/pycudadecon-0.4.0-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['cudadecon >=0.0.11', 'importlib-metadata >=1.5.0', 'numpy', 'python >=3.7', 'tifffile >=0.14.0', 'typing_extensions']",noarch,1667844488320.0,None-any-None,pyhd8ed1ab_0,2022-11-07 18:10:43.516000+00:00,7378ad1af8e99981b9c4ef254dc5dfa4,None,22591.0,conda-forge/pycudadecon/0.4.0/noarch/pycudadecon-0.4.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/pycudadecon/0.4.0/noarch/pycudadecon-0.4.0-pyhd8ed1ab_0.tar.bz2,conda,0.4.0,conda-forge,['main'],conda,noarch/pycudadecon-0.4.1-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['cudadecon >=0.0.11', 'importlib-metadata >=1.5.0', 'numpy', 'python >=3.7', 'tifffile >=0.14.0', 'typing_extensions']",MIT,python,1694644971263.0,2023-09-13 22:44:23.733000+00:00,8747c812e25b7a8657bb110bd1a6480d,68cbd4c76c6312fbb84ebb966edbc20a27a427e2efcdebc47ffa6100f47d7d1d,24605.0,conda-forge/pycudadecon/0.4.1/noarch/pycudadecon-0.4.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/pycudadecon/0.4.1/noarch/pycudadecon-0.4.1-pyhd8ed1ab_0.conda,conda,0.4.1,conda-forge,['main'],,,,,,,,,,,pycudadecon.deconvolve,CUDA-Deconvolution,True,,,,,,,,,,,,,,,,,,,,,,,0.5.1,conda-forge/pycudadecon/0.5.1,,,,,conda,noarch/pycudadecon-0.5.1-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['cudadecon >=0.7.0', 'numpy', 'python >=3.8', 'tifffile >=0.14.0', 'typing_extensions']",noarch,1724107660036.0,None-any-None,pyhd8ed1ab_0,2024-08-19 22:48:33.142000+00:00,835cecb33b39538ba03f9f4acfc94fed,2bc8ab6c785f5eb3782fd6f8313599190fc6d1a458c2e38e6d453ed56d43f7a9,24986.0,conda-forge/pycudadecon/0.5.1/noarch/pycudadecon-0.5.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/pycudadecon/0.5.1/noarch/pycudadecon-0.5.1-pyhd8ed1ab_0.conda,conda,0.5.1,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -426,recOrder-napari,0.4.1,recOrder-napari,Computational microscopy toolkit for label-free imaging,"Computational Microscopy Platform, CZ Biohub",BSD 3-Clause License,https://github.com/mehta-lab/recOrder,62cbeda8eb48862cf494dfb5,['conda'],,https://github.com/mehta-lab/recOrder,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/recorder-napari,http://api.anaconda.org/packages/conda-forge/recorder-napari,http://anaconda.org/conda-forge/recorder-napari,"['0.1.0', '0.1.1', '0.1.2', '0.2.0', '0.2.1']",0.2.1,0.2.1,['noarch'],11.0,https://github.com/mehta-lab/recOrder,['pyhd8ed1ab_0'],0.1.0,conda-forge/recorder-napari/0.1.0,1.0,0.0,2022-07-11 09:30:13.667000+00:00,2023-11-07 21:58:26.080000+00:00,conda,noarch/recorder-napari-0.1.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-2-Clause,False,python,"['click >=8.0.1', 'colorspacious >=1.1.2', 'matplotlib-base >=3.4.3', 'napari-ome-zarr >=0.3.2', 'natsort >=7.1.1', 'numpy >=1.17.4', 'opencv >=4.5.3.56', 'pycromanager >=0.17', 'pyqtgraph >=0.12.3', 'python >=3.7', 'pywavelets >=1.1.1', 'pyyaml >=5.4.1', 'qtpy', 'scipy >=1.3.0', 'superqt >=0.2.4', 'tqdm >=4.61.1', 'waveorder >=1.0.0b0', 'zarr >=2.6.1']",noarch,1657531650381.0,None-any-None,pyhd8ed1ab_0,2022-07-11 09:30:14.084000+00:00,8b40d7e300036d8d36c8322bb6d46e4b,None,113965.0,conda-forge/recorder-napari/0.1.0/noarch/recorder-napari-0.1.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/recorder-napari/0.1.0/noarch/recorder-napari-0.1.0-pyhd8ed1ab_0.tar.bz2,conda,0.1.0,conda-forge,['main'],public,,0.2.1,recOrder-napari.MainWidget,Create Main Widget,recOrder.plugin.main_widget:MainWidget,recOrder-napari.get_reader,"['*.zarr', '*.tif']",True,2.1,recOrder-napari,0.4.1,,Computational microscopy toolkit for label-free imaging,"# recOrder +",text/markdown,,,Talley Lambert ,MIT,"['Development Status :: 4 - Beta', 'Environment :: GPU :: NVIDIA CUDA', 'Framework :: napari', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: MIT License', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering']","['numpy', 'tifffile', 'typing-extensions', ""ipython; extra == 'dev'"", ""mypy; extra == 'dev'"", ""pdbpp; extra == 'dev'"", ""pre-commit; extra == 'dev'"", ""rich; extra == 'dev'"", ""ruff; extra == 'dev'"", ""furo==2022.9.29; extra == 'docs'"", ""ghp-import==2.1.0; extra == 'docs'"", ""jupyter-book==0.13.1; extra == 'docs'"", ""sphinx-autodoc-typehints==1.19.1; extra == 'docs'"", ""pytest-cov; extra == 'test'"", ""pytest>=6.0; extra == 'test'""]",>=3.8,"['Documentation, https://tlambert03.github.io/pycudadecon/', 'Source, https://github.com/tlambert03/pycudadecon', 'Tracker, https://github.com/tlambert03/pycudadecon/issues']","['dev', 'docs', 'test']",False,0.3.0,conda-forge/pycudadecon/0.3.0,0.4.0,conda-forge/pycudadecon/0.4.0,0.4.1,conda-forge/pycudadecon/0.4.1,conda,noarch/pycudadecon-0.3.0-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['cudadecon >=0.0.11', 'importlib-metadata >=1.5.0', 'numpy', 'python >=3.7', 'tifffile >=0.14.0', 'typing_extensions']",pyhd8ed1ab_0,1660170351373.0,None-any-None,noarch,2022-08-10 22:28:24.485000+00:00,0c52f2bcf0cb63682eecbbd254896a9c,None,21885.0,conda-forge/pycudadecon/0.3.0/noarch/pycudadecon-0.3.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/pycudadecon/0.3.0/noarch/pycudadecon-0.3.0-pyhd8ed1ab_0.tar.bz2,conda,0.3.0,conda-forge,['main'],conda,noarch/pycudadecon-0.4.0-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['cudadecon >=0.0.11', 'importlib-metadata >=1.5.0', 'numpy', 'python >=3.7', 'tifffile >=0.14.0', 'typing_extensions']",noarch,1667844488320.0,None-any-None,pyhd8ed1ab_0,2022-11-07 18:10:43.516000+00:00,7378ad1af8e99981b9c4ef254dc5dfa4,None,22591.0,conda-forge/pycudadecon/0.4.0/noarch/pycudadecon-0.4.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/pycudadecon/0.4.0/noarch/pycudadecon-0.4.0-pyhd8ed1ab_0.tar.bz2,conda,0.4.0,conda-forge,['main'],conda,noarch/pycudadecon-0.4.1-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['cudadecon >=0.0.11', 'importlib-metadata >=1.5.0', 'numpy', 'python >=3.7', 'tifffile >=0.14.0', 'typing_extensions']",MIT,python,1694644971263.0,2023-09-13 22:44:23.733000+00:00,8747c812e25b7a8657bb110bd1a6480d,68cbd4c76c6312fbb84ebb966edbc20a27a427e2efcdebc47ffa6100f47d7d1d,24605.0,conda-forge/pycudadecon/0.4.1/noarch/pycudadecon-0.4.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/pycudadecon/0.4.1/noarch/pycudadecon-0.4.1-pyhd8ed1ab_0.conda,conda,0.4.1,conda-forge,['main'],,,,,,,,,,,pycudadecon.deconvolve,CUDA-Deconvolution,True,,,,,,,,,,,,,,,,,,,,,,,0.5.1,conda-forge/pycudadecon/0.5.1,,,,,conda,noarch/pycudadecon-0.5.1-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['cudadecon >=0.7.0', 'numpy', 'python >=3.8', 'tifffile >=0.14.0', 'typing_extensions']",noarch,1724107660036.0,None-any-None,pyhd8ed1ab_0,2024-08-19 22:48:33.142000+00:00,835cecb33b39538ba03f9f4acfc94fed,2bc8ab6c785f5eb3782fd6f8313599190fc6d1a458c2e38e6d453ed56d43f7a9,24986.0,conda-forge/pycudadecon/0.5.1/noarch/pycudadecon-0.5.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/pycudadecon/0.5.1/noarch/pycudadecon-0.5.1-pyhd8ed1ab_0.conda,conda,0.5.1,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +448,qhyccd-capture,0.0.3.6,qhyccd-capture,The basic operations for QHYCCD series cameras,QHYCCD," +Copyright (c) 2024, +All rights reserved. + +Redistribution and use in source and binary forms, with or without +modification, are permitted provided that the following conditions are met: + +* Redistributions of source code must retain the above copyright notice, this + list of conditions and the following disclaimer. + +* Redistributions in binary form must reproduce the above copyright notice, + this list of conditions and the following disclaimer in the documentation + and/or other materials provided with the distribution. + +* Neither the name of copyright holder nor the names of its + contributors may be used to endorse or promote products derived from + this software without specific prior written permission. + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ""AS IS"" +AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE +IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE +DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE +FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL +DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR +SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER +CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, +OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE +OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. +",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,qhyccd-capture.qhyccd_capture,capture,qhyccd_capture.qhyccd_capture:CameraControlWidget,qhyccd-capture.read_raw_image,['*.raw'],False,2.1,qhyccd-capture,0.0.3.6,,The basic operations for QHYCCD series cameras,"# qhyccd-capture + +## Project Introduction + +`qhyccd-capture` is a basic operation library for handling QHYCCD series cameras. This library provides functionalities to interact with QHYCCD cameras, including camera connection, parameter setting, image capture, and display. This project is a [napari] plugin, aimed at simplifying the use of the camera through a graphical user interface. + +## Features + +- **Camera Connection**: Supports loading the corresponding QHYCCD dynamic link libraries on different operating systems (such as Windows, Linux, macOS) and initializing camera resources. +- **Parameter Setting**: Provides the functionality to set camera parameters, such as exposure time, gain, offset, USB bandwidth, etc. +- **Image Capture**: Supports single-frame mode exposure and retrieves image data. +- **Image Display**: Displays captured images through napari, supports distributed display, single display, and sequence display modes. +- **Histogram and White Balance**: Provides histogram equalization and white balance adjustment functions. +- **ROI (Region of Interest)**: Supports creating and applying ROIs to operate on specific areas. +- **Video Recording**: Supports video recording and saves in various video formats. +- **Temperature Control**: Supports temperature control and displays temperature. +- **CFW Control**: Supports CFW control and displays CFW status. +- **Star Point Resolution**: Supports star point resolution and displays the results. + +![qhyccd-capture 插件界面显示](https://raw.githubusercontent.com/LiuQiang-AI/qhyccd-capture/main/src/qhyccd_capture/images/image.png) + +## Installation +You can install via pip: + + pip install qhyccd-capture + +To install the latest development version: + + pip install git+https://github.com/nightliar-L/qhyccd-capture.git + +## Dependency Installation +#### Astrometry.net +Currently, astrometry.net only supports the Ubuntu system. + + sudo apt-get install astrometry.net + sudo apt-get install astrometry-data-tycho2 + sudo vim ~/.bashrc + # Add the following content + export PATH=$PATH:/usr/local/astrometry/bin + +## Version Changes + +- 2024-10-23 Version 0.0.1 Initial version +- 2024-10-24 Version 0.0.2 Fixed some issues introduced by the release +- 2024-10-24 Version 0.0.3 Version changes include modified descriptions and initial configurations + +## Contributing + +Contributions are very welcome. Tests can be run with [tox], please ensure +the coverage at least stays the same before you submit a pull request. + +## License + +Distributed under the terms of the [BSD-3] license, +""qhyccd-capture"" is free and open source software +",text/markdown,,QHYCCD,lq@qhyccd.com," +Copyright (c) 2024, +All rights reserved. + +Redistribution and use in source and binary forms, with or without +modification, are permitted provided that the following conditions are met: + +* Redistributions of source code must retain the above copyright notice, this + list of conditions and the following disclaimer. + +* Redistributions in binary form must reproduce the above copyright notice, + this list of conditions and the following disclaimer in the documentation + and/or other materials provided with the distribution. + +* Neither the name of copyright holder nor the names of its + contributors may be used to endorse or promote products derived from + this software without specific prior written permission. + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ""AS IS"" +AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE +IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE +DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE +FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL +DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR +SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER +CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, +OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE +OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', 'opencv-python', 'PyQt5', 'matplotlib', 'astropy', 'psutil', 'qtrangeslider', 'photutils<1.14.0,>=1.11.0', 'pybind11', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""']",>=3.9,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",qhyccd-capture.read_raw_image,Open Raw Image and Display,qhyccd_capture.read_raw_image:napari_get_reader,,,,,,,qhyccd-capture.qhyccd_capture,qhyccd-capture,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +449,recOrder-napari,0.4.1,recOrder-napari,Computational microscopy toolkit for label-free imaging,"Computational Microscopy Platform, CZ Biohub",BSD 3-Clause License,https://github.com/mehta-lab/recOrder,62cbeda8eb48862cf494dfb5,['conda'],,https://github.com/mehta-lab/recOrder,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/recorder-napari,http://api.anaconda.org/packages/conda-forge/recorder-napari,http://anaconda.org/conda-forge/recorder-napari,"['0.1.0', '0.1.1', '0.1.2', '0.2.0', '0.2.1']",0.2.1,0.2.1,['noarch'],11.0,https://github.com/mehta-lab/recOrder,['pyhd8ed1ab_0'],0.1.0,conda-forge/recorder-napari/0.1.0,1.0,0.0,2022-07-11 09:30:13.667000+00:00,2023-11-07 21:58:26.080000+00:00,conda,noarch/recorder-napari-0.1.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-2-Clause,False,python,"['click >=8.0.1', 'colorspacious >=1.1.2', 'matplotlib-base >=3.4.3', 'napari-ome-zarr >=0.3.2', 'natsort >=7.1.1', 'numpy >=1.17.4', 'opencv >=4.5.3.56', 'pycromanager >=0.17', 'pyqtgraph >=0.12.3', 'python >=3.7', 'pywavelets >=1.1.1', 'pyyaml >=5.4.1', 'qtpy', 'scipy >=1.3.0', 'superqt >=0.2.4', 'tqdm >=4.61.1', 'waveorder >=1.0.0b0', 'zarr >=2.6.1']",noarch,1657531650381.0,None-any-None,pyhd8ed1ab_0,2022-07-11 09:30:14.084000+00:00,8b40d7e300036d8d36c8322bb6d46e4b,None,113965.0,conda-forge/recorder-napari/0.1.0/noarch/recorder-napari-0.1.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/recorder-napari/0.1.0/noarch/recorder-napari-0.1.0-pyhd8ed1ab_0.tar.bz2,conda,0.1.0,conda-forge,['main'],public,,0.2.1,recOrder-napari.MainWidget,Create Main Widget,recOrder.plugin.main_widget:MainWidget,recOrder-napari.get_reader,"['*.zarr', '*.tif']",True,2.1,recOrder-napari,0.4.1,,Computational microscopy toolkit for label-free imaging,"# recOrder ![PyPI - Python Version](https://img.shields.io/pypi/pyversions/recOrder-napari) [![Python package index download statistics](https://img.shields.io/pypi/dm/recOrder-napari.svg)](https://pypistats.org/packages/recOrder-napari) [![Python package index](https://img.shields.io/pypi/v/recOrder-napari.svg)](https://pypi.org/project/recOrder-napari) @@ -45611,8 +47874,8 @@ on a microscope, see the [microscope installation guide](https://github.com/meht [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.5178487.svg)](https://doi.org/10.5281/zenodo.5178487) [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.5135889.svg)](https://doi.org/10.5281/zenodo.5135889) -",text/markdown,https://github.com/mehta-lab/recOrder,"Computational Microscopy Platform, CZ Biohub",shalin.mehta@czbiohub.org,BSD 3-Clause License,"['License :: OSI Approved :: BSD License', 'Programming Language :: Python', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering', 'Topic :: Scientific/Engineering :: Visualization', 'Topic :: Scientific/Engineering :: Information Analysis', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Topic :: Utilities', 'Framework :: napari', 'Operating System :: Microsoft :: Windows', 'Operating System :: POSIX', 'Operating System :: Unix', 'Operating System :: MacOS']","['waveorder ==2.0.0rc3', 'pycromanager ==0.27.2', 'click >=8.0.1', 'natsort >=7.1.1', 'colorspacious >=1.1.2', 'pyqtgraph >=0.12.3', 'napari-ome-zarr >=0.3.2', 'napari[pyqt6_experimental]', 'importlib-metadata', 'iohub ==0.1.0.dev5', 'wget >=3.2', ""pytest >=5.0.0 ; extra == 'dev'"", ""pytest-cov ; extra == 'dev'"", ""pytest-qt ; extra == 'dev'"", ""tox ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""black ; extra == 'dev'"", ""hypothesis ; extra == 'dev'""]",>=3.9,"['Bug Tracker, https://github.com/mehta-lab/recOrder/issues', 'Documentation, https://github.com/mehta-lab/recOrder/wiki', 'Source Code, https://github.com/mehta-lab/recOrder/tree/main/recOrder', 'User Support, https://github.com/mehta-lab/recOrder/issues']",['dev'],False,0.1.1,conda-forge/recorder-napari/0.1.1,0.1.2,conda-forge/recorder-napari/0.1.2,0.2.0,conda-forge/recorder-napari/0.2.0,conda,noarch/recorder-napari-0.1.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-2-Clause,False,python,"['click >=8.0.1', 'colorspacious >=1.1.2', 'matplotlib-base >=3.4.3', 'napari', 'napari-ome-zarr >=0.3.2', 'natsort >=7.1.1', 'numpy >=1.17.4', 'opencv >=4.5.3.56', 'pycromanager >=0.17', 'pyqtgraph >=0.12.3', 'python >=3.7', 'pywavelets >=1.1.1', 'pyyaml >=5.4.1', 'qtpy', 'scipy >=1.3.0', 'superqt >=0.2.4', 'tifffile', 'tqdm >=4.61.1', 'waveorder 1.0.0b0', 'zarr >=2.6.1']",pyhd8ed1ab_0,1666661522772.0,None-any-None,noarch,2022-10-25 01:35:02.029000+00:00,a5e62bc92dcdc4143c08fcc8073a1a61,None,114504.0,conda-forge/recorder-napari/0.1.1/noarch/recorder-napari-0.1.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/recorder-napari/0.1.1/noarch/recorder-napari-0.1.1-pyhd8ed1ab_0.tar.bz2,conda,0.1.1,conda-forge,['main'],conda,noarch/recorder-napari-0.1.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-2-Clause,False,python,"['click >=8.0.1', 'colorspacious >=1.1.2', 'matplotlib-base >=3.4.3', 'napari', 'napari-ome-zarr >=0.3.2', 'natsort >=7.1.1', 'numpy >=1.17.4', 'opencv >=4.5.3.56', 'pycromanager >=0.17', 'pyqtgraph >=0.12.3', 'python >=3.7', 'pywavelets >=1.1.1', 'pyyaml >=5.4.1', 'qtpy', 'scipy >=1.3.0', 'superqt >=0.2.4', 'tifffile', 'tqdm >=4.61.1', 'waveorder 1.0.0b0', 'zarr >=2.6.1']",noarch,1666662306373.0,None-any-None,pyhd8ed1ab_0,2022-10-25 01:47:40.313000+00:00,20c9330264f3a99e5c732a719903efe9,None,116695.0,conda-forge/recorder-napari/0.1.2/noarch/recorder-napari-0.1.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/recorder-napari/0.1.2/noarch/recorder-napari-0.1.2-pyhd8ed1ab_0.tar.bz2,conda,0.1.2,conda-forge,['main'],conda,noarch/recorder-napari-0.2.0-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['click >=8.0.1', 'colorspacious >=1.1.2', 'importlib-metadata', 'matplotlib-base >=3.4.3', 'napari', 'napari-ome-zarr >=0.3.2', 'natsort >=7.1.1', 'numpy >=1.17.4', 'numpydoc', 'opencv >=4.5.3.56', 'packaging', 'psutil', 'pycromanager >=0.17', 'pyqtgraph >=0.12.3', 'python >=3.7', 'pywavelets >=1.1.1', 'pyyaml >=5.4.1', 'qtpy', 'scipy >=1.3.0', 'superqt >=0.2.4', 'tifffile', 'tqdm >=4.61.1', 'waveorder 1.0.0rc0', 'zarr >=2.6.1']",BSD-2-Clause,python,1666664986779.0,2022-10-25 02:32:49.040000+00:00,4c64eeeacc14706684e1728161afd7cb,None,98091.0,conda-forge/recorder-napari/0.2.0/noarch/recorder-napari-0.2.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/recorder-napari/0.2.0/noarch/recorder-napari-0.2.0-pyhd8ed1ab_0.tar.bz2,conda,0.2.0,conda-forge,['main'],,recOrder-napari.get_reader,Read ome-zarr and ome-tif files,recOrder.io._reader:napari_get_reader,recOrder-napari.polarization_target_data,Polarization Target Data,recOrder.scripts.samples:read_polarization_target_data,recOrder-napari.polarization_target_reconstruction,Polarization Target Data,recOrder.scripts.samples:read_polarization_target_reconstruction,recOrder-napari.MainWidget,Main Menu,False,,,,,,,,,,recOrder-napari.zebrafish_embryo_reconstruction,Zebrafish Embryo Reconstruction,recOrder.scripts.samples:read_zebrafish_embryo_reconstruction,,,,,,,,recOrder-napari.polarization_target_data,polarization-target-data,Polarization Target Data (10 MB),0.2.1,conda-forge/recorder-napari/0.2.1,,,,,conda,noarch/recorder-napari-0.2.1-pyhd8ed1ab_0.conda,0.0,BSD-2-Clause,False,python,"['click >=8.0.1', 'colorspacious >=1.1.2', 'imageio !=2.11.0,!=2.22.1', 'importlib-metadata', 'matplotlib-base >=3.4.3', 'napari', 'napari-ome-zarr >=0.3.2', 'natsort >=7.1.1', 'numpy 1.23.5', 'numpydoc', 'opencv >=4.5.3.56', 'packaging', 'psutil', 'pycromanager 0.19.2', 'pyqtgraph >=0.12.3', 'python >=3.8', 'pyyaml >=5.4.1', 'qtpy', 'scipy >=1.3.0', 'superqt >=0.2.4', 'tifffile', 'tqdm >=4.61.1', 'waveorder 1.0.0rc0', 'zarr >=2.6.1']",noarch,1699394145078.0,None-any-None,pyhd8ed1ab_0,2023-11-07 21:58:24.188000+00:00,1f7d8a22f65f6c12d190e711723c5350,85cd47071478b9e67d8190aca1746f118c4a926f6fc1233ac86a4322c77da5a8,102430.0,conda-forge/recorder-napari/0.2.1/noarch/recorder-napari-0.2.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/recorder-napari/0.2.1/noarch/recorder-napari-0.2.1-pyhd8ed1ab_0.conda,conda,0.2.1,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,recOrder-napari.polarization_target_reconstruction,polarization-target-reconstruction,Polarization Target Reconstruction (10 MB),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,recOrder-napari.zebrafish_embryo_reconstruction,zebrafish-embryo-reconstruction,Zebrafish Embryo Reconstruction (92 MB) -427,RedLionfish,0.10,RedLionfish,Fast Richardson-Lucy deconvolution of 3D volume data using GPU or CPU with napari plugin.,Luis Perdigao,"Apache License, Version 2.0",https://github.com/rosalindfranklininstitute/RedLionfish,619da6666153904138c41cd3,['conda'],Fast Richardson-Lucy deconvolution of 3D volume data using GPU or CPU with napari plugin.,https://github.com/rosalindfranklininstitute/RedLionfish,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/redlionfish,http://api.anaconda.org/packages/conda-forge/redlionfish,http://anaconda.org/conda-forge/redlionfish,"['0.5', '0.6', '0.8', '0.9', '0.10']",0.10,,"['linux-64', 'osx-64', 'osx-arm64', 'win-64']",95.0,https://github.com/rosalindfranklininstitute/RedLionfish,"['py310h2ec42d9_0', 'py310h2ec42d9_1', 'py310h2ec42d9_2', 'py310h2ec42d9_3', 'py310h5588dad_0', 'py310h5588dad_1', 'py310h5588dad_2', 'py310h5588dad_3', 'py310hbe9552e_0', 'py310hbe9552e_1', 'py310hbe9552e_2', 'py310hbe9552e_3', 'py310hff52083_0', 'py310hff52083_1', 'py310hff52083_2', 'py310hff52083_3', 'py311h1ea47a8_0', 'py311h1ea47a8_2', 'py311h1ea47a8_3', 'py311h267d04e_0', 'py311h267d04e_2', 'py311h267d04e_3', 'py311h38be061_2', 'py311h38be061_3', 'py311h6eed73b_0', 'py311h6eed73b_2', 'py311h6eed73b_3', 'py312h2e8e312_0', 'py312h2e8e312_3', 'py312h7900ff3_3', 'py312h81bd7bf_0', 'py312h81bd7bf_3', 'py312hb401068_0', 'py312hb401068_3', 'py37h03978a9_0', 'py37h03978a9_1', 'py37h89c1867_0', 'py37h89c1867_1', 'py37hf985489_0', 'py37hf985489_1', 'py38h10201cd_0', 'py38h10201cd_1', 'py38h10201cd_2', 'py38h10201cd_3', 'py38h50d1736_0', 'py38h50d1736_1', 'py38h50d1736_2', 'py38h50d1736_3', 'py38h578d9bd_0', 'py38h578d9bd_1', 'py38h578d9bd_2', 'py38h578d9bd_3', 'py38haa244fe_0', 'py38haa244fe_1', 'py38haa244fe_2', 'py38haa244fe_3', 'py39h2804cbe_0', 'py39h2804cbe_1', 'py39h2804cbe_2', 'py39h2804cbe_3', 'py39h6e9494a_0', 'py39h6e9494a_1', 'py39h6e9494a_2', 'py39h6e9494a_3', 'py39hcbf5309_0', 'py39hcbf5309_1', 'py39hcbf5309_2', 'py39hcbf5309_3', 'py39hf3d152e_0', 'py39hf3d152e_1', 'py39hf3d152e_2', 'py39hf3d152e_3']",0.5,conda-forge/redlionfish/0.5,1.0,0.0,2021-11-24 02:41:40.678000+00:00,2024-03-22 17:10:20.836000+00:00,conda,linux-64/redlionfish-0.5-py38h578d9bd_0.tar.bz2,0.0,Apache-2.0,False,,"['numpy', 'ocl-icd-system', 'pyopencl', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'reikna', 'scipy']",linux-64,1637721674285.0,x86_64-any-linux,py38h578d9bd_0,2021-11-24 02:41:40.983000+00:00,7693a99e2c59cb7dd999ed4a87030e88,None,27984.0,conda-forge/redlionfish/0.5/linux-64/redlionfish-0.5-py38h578d9bd_0.tar.bz2,//api.anaconda.org/download/conda-forge/redlionfish/0.5/linux-64/redlionfish-0.5-py38h578d9bd_0.tar.bz2,conda,0.5,conda-forge,['main'],public,,0.2.1,RedLionfish.RedLionfish_widget,RedLionfish_widget,RedLionfishDeconv.napari_plugin:RedLionfish_widget,,,,2.1,RedLionfish,0.10,,Fast Richardson-Lucy deconvolution of 3D volume data using GPU or CPU with napari plugin.,"![RedLionfish Logo](./redlionfish_logo.svg) +",text/markdown,https://github.com/mehta-lab/recOrder,"Computational Microscopy Platform, CZ Biohub",shalin.mehta@czbiohub.org,BSD 3-Clause License,"['License :: OSI Approved :: BSD License', 'Programming Language :: Python', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering', 'Topic :: Scientific/Engineering :: Visualization', 'Topic :: Scientific/Engineering :: Information Analysis', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Topic :: Utilities', 'Framework :: napari', 'Operating System :: Microsoft :: Windows', 'Operating System :: POSIX', 'Operating System :: Unix', 'Operating System :: MacOS']","['waveorder ==2.0.0rc3', 'pycromanager ==0.27.2', 'click >=8.0.1', 'natsort >=7.1.1', 'colorspacious >=1.1.2', 'pyqtgraph >=0.12.3', 'napari-ome-zarr >=0.3.2', 'napari[pyqt6_experimental]', 'importlib-metadata', 'iohub ==0.1.0.dev5', 'wget >=3.2', ""pytest >=5.0.0 ; extra == 'dev'"", ""pytest-cov ; extra == 'dev'"", ""pytest-qt ; extra == 'dev'"", ""tox ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""black ; extra == 'dev'"", ""hypothesis ; extra == 'dev'""]",>=3.9,"['Bug Tracker, https://github.com/mehta-lab/recOrder/issues', 'Documentation, https://github.com/mehta-lab/recOrder/wiki', 'Source Code, https://github.com/mehta-lab/recOrder/tree/main/recOrder', 'User Support, https://github.com/mehta-lab/recOrder/issues']",['dev'],False,0.1.1,conda-forge/recorder-napari/0.1.1,0.1.2,conda-forge/recorder-napari/0.1.2,0.2.0,conda-forge/recorder-napari/0.2.0,conda,noarch/recorder-napari-0.1.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-2-Clause,False,python,"['click >=8.0.1', 'colorspacious >=1.1.2', 'matplotlib-base >=3.4.3', 'napari', 'napari-ome-zarr >=0.3.2', 'natsort >=7.1.1', 'numpy >=1.17.4', 'opencv >=4.5.3.56', 'pycromanager >=0.17', 'pyqtgraph >=0.12.3', 'python >=3.7', 'pywavelets >=1.1.1', 'pyyaml >=5.4.1', 'qtpy', 'scipy >=1.3.0', 'superqt >=0.2.4', 'tifffile', 'tqdm >=4.61.1', 'waveorder 1.0.0b0', 'zarr >=2.6.1']",pyhd8ed1ab_0,1666661522772.0,None-any-None,noarch,2022-10-25 01:35:02.029000+00:00,a5e62bc92dcdc4143c08fcc8073a1a61,None,114504.0,conda-forge/recorder-napari/0.1.1/noarch/recorder-napari-0.1.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/recorder-napari/0.1.1/noarch/recorder-napari-0.1.1-pyhd8ed1ab_0.tar.bz2,conda,0.1.1,conda-forge,['main'],conda,noarch/recorder-napari-0.1.2-pyhd8ed1ab_0.tar.bz2,0.0,BSD-2-Clause,False,python,"['click >=8.0.1', 'colorspacious >=1.1.2', 'matplotlib-base >=3.4.3', 'napari', 'napari-ome-zarr >=0.3.2', 'natsort >=7.1.1', 'numpy >=1.17.4', 'opencv >=4.5.3.56', 'pycromanager >=0.17', 'pyqtgraph >=0.12.3', 'python >=3.7', 'pywavelets >=1.1.1', 'pyyaml >=5.4.1', 'qtpy', 'scipy >=1.3.0', 'superqt >=0.2.4', 'tifffile', 'tqdm >=4.61.1', 'waveorder 1.0.0b0', 'zarr >=2.6.1']",noarch,1666662306373.0,None-any-None,pyhd8ed1ab_0,2022-10-25 01:47:40.313000+00:00,20c9330264f3a99e5c732a719903efe9,None,116695.0,conda-forge/recorder-napari/0.1.2/noarch/recorder-napari-0.1.2-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/recorder-napari/0.1.2/noarch/recorder-napari-0.1.2-pyhd8ed1ab_0.tar.bz2,conda,0.1.2,conda-forge,['main'],conda,noarch/recorder-napari-0.2.0-pyhd8ed1ab_0.tar.bz2,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['click >=8.0.1', 'colorspacious >=1.1.2', 'importlib-metadata', 'matplotlib-base >=3.4.3', 'napari', 'napari-ome-zarr >=0.3.2', 'natsort >=7.1.1', 'numpy >=1.17.4', 'numpydoc', 'opencv >=4.5.3.56', 'packaging', 'psutil', 'pycromanager >=0.17', 'pyqtgraph >=0.12.3', 'python >=3.7', 'pywavelets >=1.1.1', 'pyyaml >=5.4.1', 'qtpy', 'scipy >=1.3.0', 'superqt >=0.2.4', 'tifffile', 'tqdm >=4.61.1', 'waveorder 1.0.0rc0', 'zarr >=2.6.1']",BSD-2-Clause,python,1666664986779.0,2022-10-25 02:32:49.040000+00:00,4c64eeeacc14706684e1728161afd7cb,None,98091.0,conda-forge/recorder-napari/0.2.0/noarch/recorder-napari-0.2.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/recorder-napari/0.2.0/noarch/recorder-napari-0.2.0-pyhd8ed1ab_0.tar.bz2,conda,0.2.0,conda-forge,['main'],,recOrder-napari.get_reader,Read ome-zarr and ome-tif files,recOrder.io._reader:napari_get_reader,recOrder-napari.polarization_target_data,Polarization Target Data,recOrder.scripts.samples:read_polarization_target_data,recOrder-napari.polarization_target_reconstruction,Polarization Target Data,recOrder.scripts.samples:read_polarization_target_reconstruction,recOrder-napari.MainWidget,Main Menu,False,,,,,,,,,,recOrder-napari.zebrafish_embryo_reconstruction,Zebrafish Embryo Reconstruction,recOrder.scripts.samples:read_zebrafish_embryo_reconstruction,,,,,,,,recOrder-napari.polarization_target_data,polarization-target-data,Polarization Target Data (10 MB),0.2.1,conda-forge/recorder-napari/0.2.1,,,,,conda,noarch/recorder-napari-0.2.1-pyhd8ed1ab_0.conda,0.0,BSD-2-Clause,False,python,"['click >=8.0.1', 'colorspacious >=1.1.2', 'imageio !=2.11.0,!=2.22.1', 'importlib-metadata', 'matplotlib-base >=3.4.3', 'napari', 'napari-ome-zarr >=0.3.2', 'natsort >=7.1.1', 'numpy 1.23.5', 'numpydoc', 'opencv >=4.5.3.56', 'packaging', 'psutil', 'pycromanager 0.19.2', 'pyqtgraph >=0.12.3', 'python >=3.8', 'pyyaml >=5.4.1', 'qtpy', 'scipy >=1.3.0', 'superqt >=0.2.4', 'tifffile', 'tqdm >=4.61.1', 'waveorder 1.0.0rc0', 'zarr >=2.6.1']",noarch,1699394145078.0,None-any-None,pyhd8ed1ab_0,2023-11-07 21:58:24.188000+00:00,1f7d8a22f65f6c12d190e711723c5350,85cd47071478b9e67d8190aca1746f118c4a926f6fc1233ac86a4322c77da5a8,102430.0,conda-forge/recorder-napari/0.2.1/noarch/recorder-napari-0.2.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/recorder-napari/0.2.1/noarch/recorder-napari-0.2.1-pyhd8ed1ab_0.conda,conda,0.2.1,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,recOrder-napari.polarization_target_reconstruction,polarization-target-reconstruction,Polarization Target Reconstruction (10 MB),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,recOrder-napari.zebrafish_embryo_reconstruction,zebrafish-embryo-reconstruction,Zebrafish Embryo Reconstruction (92 MB) +450,RedLionfish,0.10,RedLionfish,Fast Richardson-Lucy deconvolution of 3D volume data using GPU or CPU with napari plugin.,Luis Perdigao,"Apache License, Version 2.0",https://github.com/rosalindfranklininstitute/RedLionfish,619da6666153904138c41cd3,['conda'],Fast Richardson-Lucy deconvolution of 3D volume data using GPU or CPU with napari plugin.,https://github.com/rosalindfranklininstitute/RedLionfish,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/redlionfish,http://api.anaconda.org/packages/conda-forge/redlionfish,http://anaconda.org/conda-forge/redlionfish,"['0.5', '0.6', '0.8', '0.9', '0.10']",0.10,,"['linux-64', 'osx-64', 'osx-arm64', 'win-64']",95.0,https://github.com/rosalindfranklininstitute/RedLionfish,"['py310h2ec42d9_0', 'py310h2ec42d9_1', 'py310h2ec42d9_2', 'py310h2ec42d9_3', 'py310h5588dad_0', 'py310h5588dad_1', 'py310h5588dad_2', 'py310h5588dad_3', 'py310hbe9552e_0', 'py310hbe9552e_1', 'py310hbe9552e_2', 'py310hbe9552e_3', 'py310hff52083_0', 'py310hff52083_1', 'py310hff52083_2', 'py310hff52083_3', 'py311h1ea47a8_0', 'py311h1ea47a8_2', 'py311h1ea47a8_3', 'py311h267d04e_0', 'py311h267d04e_2', 'py311h267d04e_3', 'py311h38be061_2', 'py311h38be061_3', 'py311h6eed73b_0', 'py311h6eed73b_2', 'py311h6eed73b_3', 'py312h2e8e312_0', 'py312h2e8e312_3', 'py312h7900ff3_3', 'py312h81bd7bf_0', 'py312h81bd7bf_3', 'py312hb401068_0', 'py312hb401068_3', 'py37h03978a9_0', 'py37h03978a9_1', 'py37h89c1867_0', 'py37h89c1867_1', 'py37hf985489_0', 'py37hf985489_1', 'py38h10201cd_0', 'py38h10201cd_1', 'py38h10201cd_2', 'py38h10201cd_3', 'py38h50d1736_0', 'py38h50d1736_1', 'py38h50d1736_2', 'py38h50d1736_3', 'py38h578d9bd_0', 'py38h578d9bd_1', 'py38h578d9bd_2', 'py38h578d9bd_3', 'py38haa244fe_0', 'py38haa244fe_1', 'py38haa244fe_2', 'py38haa244fe_3', 'py39h2804cbe_0', 'py39h2804cbe_1', 'py39h2804cbe_2', 'py39h2804cbe_3', 'py39h6e9494a_0', 'py39h6e9494a_1', 'py39h6e9494a_2', 'py39h6e9494a_3', 'py39hcbf5309_0', 'py39hcbf5309_1', 'py39hcbf5309_2', 'py39hcbf5309_3', 'py39hf3d152e_0', 'py39hf3d152e_1', 'py39hf3d152e_2', 'py39hf3d152e_3']",0.5,conda-forge/redlionfish/0.5,1.0,0.0,2021-11-24 02:41:40.678000+00:00,2024-03-22 17:10:20.836000+00:00,conda,linux-64/redlionfish-0.5-py38h578d9bd_0.tar.bz2,0.0,Apache-2.0,False,,"['numpy', 'ocl-icd-system', 'pyopencl', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'reikna', 'scipy']",linux-64,1637721674285.0,x86_64-any-linux,py38h578d9bd_0,2021-11-24 02:41:40.983000+00:00,7693a99e2c59cb7dd999ed4a87030e88,None,27984.0,conda-forge/redlionfish/0.5/linux-64/redlionfish-0.5-py38h578d9bd_0.tar.bz2,//api.anaconda.org/download/conda-forge/redlionfish/0.5/linux-64/redlionfish-0.5-py38h578d9bd_0.tar.bz2,conda,0.5,conda-forge,['main'],public,,0.2.1,RedLionfish.RedLionfish_widget,RedLionfish_widget,RedLionfishDeconv.napari_plugin:RedLionfish_widget,,,,2.1,RedLionfish,0.10,,Fast Richardson-Lucy deconvolution of 3D volume data using GPU or CPU with napari plugin.,"![RedLionfish Logo](./redlionfish_logo.svg) # RedLionfish (RL) deconvolution @@ -45837,8 +48100,114 @@ It will take a while to complete. Report issues and questions in project's github page, please. Please don't try to send emails as they may be igored or spam-filtered. -",text/markdown,https://github.com/rosalindfranklininstitute/RedLionfish,Luis Perdigao,luis.perdigao@rfi.ac.uk,"Apache License, Version 2.0","['Development Status :: 4 - Beta ', 'License :: OSI Approved :: Apache Software License', 'Natural Language :: English', 'Programming Language :: Python :: 3.8', 'Operating System :: Microsoft :: Windows', 'Operating System :: MacOS', 'Operating System :: POSIX :: Linux', 'Topic :: Scientific/Engineering :: Image Processing', 'Framework :: napari']","['numpy', 'scipy', 'pyopencl', 'reikna']",,,,True,0.6,conda-forge/redlionfish/0.6,0.8,conda-forge/redlionfish/0.8,0.9,conda-forge/redlionfish/0.9,conda,linux-64/redlionfish-0.5-py37h89c1867_0.tar.bz2,0.0,Apache-2.0,False,,"['numpy', 'ocl-icd-system', 'pyopencl', 'python >=3.7,<3.8.0a0', 'python_abi 3.7.* *_cp37m', 'reikna', 'scipy']",py37h89c1867_0,1637721691717.0,x86_64-any-linux,linux-64,2021-11-24 02:41:58.805000+00:00,c1e44f7a1a1881c31e4f4418ebfa31e7,None,28060.0,conda-forge/redlionfish/0.5/linux-64/redlionfish-0.5-py37h89c1867_0.tar.bz2,//api.anaconda.org/download/conda-forge/redlionfish/0.5/linux-64/redlionfish-0.5-py37h89c1867_0.tar.bz2,conda,0.5,conda-forge,['main'],conda,linux-64/redlionfish-0.5-py39hf3d152e_0.tar.bz2,0.0,Apache-2.0,False,,"['numpy', 'ocl-icd-system', 'pyopencl', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'reikna', 'scipy']",linux-64,1637721712770.0,x86_64-any-linux,py39hf3d152e_0,2021-11-24 02:42:24.627000+00:00,48ce44dcb943462362ab37a3347c4d33,None,28016.0,conda-forge/redlionfish/0.5/linux-64/redlionfish-0.5-py39hf3d152e_0.tar.bz2,//api.anaconda.org/download/conda-forge/redlionfish/0.5/linux-64/redlionfish-0.5-py39hf3d152e_0.tar.bz2,conda,0.5,conda-forge,['main'],conda,osx-64/redlionfish-0.5-py38h50d1736_0.tar.bz2,x86_64-any-darwin,False,osx-64,py38h50d1736_0,0.0,"['numpy', 'pyopencl', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'reikna', 'scipy']",Apache-2.0,,1637721825524.0,2021-11-24 02:44:22.719000+00:00,e9e5d88d958039022c28d24445c1c9d8,None,28014.0,conda-forge/redlionfish/0.5/osx-64/redlionfish-0.5-py38h50d1736_0.tar.bz2,//api.anaconda.org/download/conda-forge/redlionfish/0.5/osx-64/redlionfish-0.5-py38h50d1736_0.tar.bz2,conda,0.5,conda-forge,['main'],,,,,,,,,,,RedLionfish.RedLionfish_widget,RedLionfish_widget,False,,,,,,,,,,,,,,,,,,,,,,,0.10,conda-forge/redlionfish/0.10,,,,,conda,win-64/redlionfish-0.5-py38haa244fe_0.tar.bz2,0.0,Apache-2.0,False,,"['numpy', 'pyopencl', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'reikna', 'scipy']",win-64,1637721964063.0,x86_64-any-win32,py38haa244fe_0,2021-11-24 02:47:56.439000+00:00,dfd811b6464af8e23abdd3a56301908e,None,28466.0,conda-forge/redlionfish/0.5/win-64/redlionfish-0.5-py38haa244fe_0.tar.bz2,//api.anaconda.org/download/conda-forge/redlionfish/0.5/win-64/redlionfish-0.5-py38haa244fe_0.tar.bz2,conda,0.5,conda-forge,['main'],conda,win-64/redlionfish-0.5-py37h03978a9_0.tar.bz2,0.0,Apache-2.0,False,,"['numpy', 'pyopencl', 'python >=3.7,<3.8.0a0', 'python_abi 3.7.* *_cp37m', 'reikna', 'scipy']",win-64,1637721973793.0,x86_64-any-win32,py37h03978a9_0,2021-11-24 02:48:04.834000+00:00,1ef27e2e7fb17d76b40476fd226844e8,None,28494.0,conda-forge/redlionfish/0.5/win-64/redlionfish-0.5-py37h03978a9_0.tar.bz2,//api.anaconda.org/download/conda-forge/redlionfish/0.5/win-64/redlionfish-0.5-py37h03978a9_0.tar.bz2,conda,0.5,conda-forge,['main'],conda,osx-64/redlionfish-0.5-py37hf985489_0.tar.bz2,x86_64-any-darwin,False,osx-64,py37hf985489_0,0.0,"['numpy', 'pyopencl', 'python >=3.7,<3.8.0a0', 'python_abi 3.7.* *_cp37m', 'reikna', 'scipy']",Apache-2.0,,1637722044006.0,2021-11-24 02:48:12.715000+00:00,5c84eb98313f082413eeac638dcc4d8b,None,28037.0,conda-forge/redlionfish/0.5/osx-64/redlionfish-0.5-py37hf985489_0.tar.bz2,//api.anaconda.org/download/conda-forge/redlionfish/0.5/osx-64/redlionfish-0.5-py37hf985489_0.tar.bz2,conda,0.5,conda-forge,['main'],,,,,,,,,,,conda,osx-64/redlionfish-0.5-py39h6e9494a_0.tar.bz2,0.0,Apache-2.0,False,,"['numpy', 'pyopencl', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'reikna', 'scipy']",osx-64,1637722057533.0,x86_64-any-darwin,py39h6e9494a_0,2021-11-24 02:48:23.682000+00:00,63b08f799313201d54e56e08f8c08cfa,None,27987.0,conda-forge/redlionfish/0.5/osx-64/redlionfish-0.5-py39h6e9494a_0.tar.bz2,//api.anaconda.org/download/conda-forge/redlionfish/0.5/osx-64/redlionfish-0.5-py39h6e9494a_0.tar.bz2,conda,0.5,conda-forge,['main'],conda,win-64/redlionfish-0.5-py39hcbf5309_0.tar.bz2,x86_64-any-win32,False,win-64,py39hcbf5309_0,0.0,"['numpy', 'pyopencl', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'reikna', 'scipy']",Apache-2.0,,1637722030240.0,2021-11-24 02:49:12.672000+00:00,8c44c2c3b99228d52b42243972f91d8a,None,28433.0,conda-forge/redlionfish/0.5/win-64/redlionfish-0.5-py39hcbf5309_0.tar.bz2,//api.anaconda.org/download/conda-forge/redlionfish/0.5/win-64/redlionfish-0.5-py39hcbf5309_0.tar.bz2,conda,0.5,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,conda,linux-64/redlionfish-0.5-py38h578d9bd_1.tar.bz2,x86_64-any-linux,False,linux-64,py38h578d9bd_1,1.0,"['numpy', 'ocl-icd-system', 'pyopencl', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'reikna', 'scipy']",Apache-2.0,,1637771092600.0,2021-11-24 16:25:17.786000+00:00,4dfe07f7a7480a80fb54d14a7161663f,None,28004.0,conda-forge/redlionfish/0.5/linux-64/redlionfish-0.5-py38h578d9bd_1.tar.bz2,//api.anaconda.org/download/conda-forge/redlionfish/0.5/linux-64/redlionfish-0.5-py38h578d9bd_1.tar.bz2,conda,0.5,conda-forge,['main'],,,conda,linux-64/redlionfish-0.5-py310hff52083_1.tar.bz2,x86_64-any-linux,False,linux-64,py310hff52083_1,1.0,"['numpy', 'ocl-icd-system', 'pyopencl', 'python >=3.10,<3.11.0a0', 'python_abi 3.10.* *_cp310', 'reikna', 'scipy']",Apache-2.0,1637771095243.0,2021-11-24 16:25:32.888000+00:00,3c5e224d6900a628b534ec8283efea67,None,28104.0,conda-forge/redlionfish/0.5/linux-64/redlionfish-0.5-py310hff52083_1.tar.bz2,//api.anaconda.org/download/conda-forge/redlionfish/0.5/linux-64/redlionfish-0.5-py310hff52083_1.tar.bz2,conda,0.5,conda-forge,['main'],conda,linux-64/redlionfish-0.5-py39hf3d152e_1.tar.bz2,x86_64-any-linux,False,linux-64,py39hf3d152e_1,1.0,"['numpy', 'ocl-icd-system', 'pyopencl', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'reikna', 'scipy']",Apache-2.0,1637771109161.0,2021-11-24 16:25:38.284000+00:00,738332ccc9ad8ef0f478c09d50fd938d,None,28022.0,conda-forge/redlionfish/0.5/linux-64/redlionfish-0.5-py39hf3d152e_1.tar.bz2,//api.anaconda.org/download/conda-forge/redlionfish/0.5/linux-64/redlionfish-0.5-py39hf3d152e_1.tar.bz2,conda,0.5,conda-forge,['main'],conda,linux-64/redlionfish-0.5-py37h89c1867_1.tar.bz2,x86_64-any-linux,False,linux-64,py37h89c1867_1,1.0,"['numpy', 'ocl-icd-system', 'pyopencl', 'python >=3.7,<3.8.0a0', 'python_abi 3.7.* *_cp37m', 'reikna', 'scipy']",Apache-2.0,1637771111233.0,2021-11-24 16:25:40.381000+00:00,21333ac840e9700b2c632b59f7f71fb7,None,28058.0,conda-forge/redlionfish/0.5/linux-64/redlionfish-0.5-py37h89c1867_1.tar.bz2,//api.anaconda.org/download/conda-forge/redlionfish/0.5/linux-64/redlionfish-0.5-py37h89c1867_1.tar.bz2,conda,0.5,conda-forge,['main'],,, -428,set-calibration,0.0.1,Calibration Tool,"""A tool allowing to modify the calibration (physical units) of images""",Clement H. Benedetti,MIT,https://github.com/MontpellierRessourcesImagerie/set-calibration,655933eeae25e20714de204f,['conda'],,https://pypi.org/project/set-calibration,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/set-calibration,http://api.anaconda.org/packages/conda-forge/set-calibration,http://anaconda.org/conda-forge/set-calibration,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,https://github.com/MontpellierRessourcesImagerie/set-calibration,['pyh9208f05_0'],0.0.1,conda-forge/set-calibration/0.0.1,1.0,0.0,2023-11-18 22:00:11.071000+00:00,2023-11-18 22:00:14.531000+00:00,conda,noarch/set-calibration-0.0.1-pyh9208f05_0.conda,0.0,MIT,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image']",noarch,1700344690722.0,None-any-None,pyh9208f05_0,2023-11-18 22:00:11.494000+00:00,f62820b5824eab0116c8aa54b5248903,9f5f00dd93cede6163706be96d8451075f9206089cfc6bc10f7a6eee2d6d0f19,11988.0,conda-forge/set-calibration/0.0.1/noarch/set-calibration-0.0.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/set-calibration/0.0.1/noarch/set-calibration-0.0.1-pyh9208f05_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,set-calibration.create_scale_panel,Instanciate a scale-edition panel.,set_calibration:LayerScaleWidget,,,,2.1,set-calibration,0.0.1,,"""A tool allowing to modify the calibration (physical units) of images""","# set-calibration +",text/markdown,https://github.com/rosalindfranklininstitute/RedLionfish,Luis Perdigao,luis.perdigao@rfi.ac.uk,"Apache License, Version 2.0","['Development Status :: 4 - Beta ', 'License :: OSI Approved :: Apache Software License', 'Natural Language :: English', 'Programming Language :: Python :: 3.8', 'Operating System :: Microsoft :: Windows', 'Operating System :: MacOS', 'Operating System :: POSIX :: Linux', 'Topic :: Scientific/Engineering :: Image Processing', 'Framework :: napari']","['numpy', 'scipy', 'pyopencl', 'reikna']",,,,True,0.6,conda-forge/redlionfish/0.6,0.8,conda-forge/redlionfish/0.8,0.9,conda-forge/redlionfish/0.9,conda,linux-64/redlionfish-0.5-py37h89c1867_0.tar.bz2,0.0,Apache-2.0,False,,"['numpy', 'ocl-icd-system', 'pyopencl', 'python >=3.7,<3.8.0a0', 'python_abi 3.7.* *_cp37m', 'reikna', 'scipy']",py37h89c1867_0,1637721691717.0,x86_64-any-linux,linux-64,2021-11-24 02:41:58.805000+00:00,c1e44f7a1a1881c31e4f4418ebfa31e7,None,28060.0,conda-forge/redlionfish/0.5/linux-64/redlionfish-0.5-py37h89c1867_0.tar.bz2,//api.anaconda.org/download/conda-forge/redlionfish/0.5/linux-64/redlionfish-0.5-py37h89c1867_0.tar.bz2,conda,0.5,conda-forge,['main'],conda,linux-64/redlionfish-0.5-py39hf3d152e_0.tar.bz2,0.0,Apache-2.0,False,,"['numpy', 'ocl-icd-system', 'pyopencl', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'reikna', 'scipy']",linux-64,1637721712770.0,x86_64-any-linux,py39hf3d152e_0,2021-11-24 02:42:24.627000+00:00,48ce44dcb943462362ab37a3347c4d33,None,28016.0,conda-forge/redlionfish/0.5/linux-64/redlionfish-0.5-py39hf3d152e_0.tar.bz2,//api.anaconda.org/download/conda-forge/redlionfish/0.5/linux-64/redlionfish-0.5-py39hf3d152e_0.tar.bz2,conda,0.5,conda-forge,['main'],conda,osx-64/redlionfish-0.5-py38h50d1736_0.tar.bz2,x86_64-any-darwin,False,osx-64,py38h50d1736_0,0.0,"['numpy', 'pyopencl', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'reikna', 'scipy']",Apache-2.0,,1637721825524.0,2021-11-24 02:44:22.719000+00:00,e9e5d88d958039022c28d24445c1c9d8,None,28014.0,conda-forge/redlionfish/0.5/osx-64/redlionfish-0.5-py38h50d1736_0.tar.bz2,//api.anaconda.org/download/conda-forge/redlionfish/0.5/osx-64/redlionfish-0.5-py38h50d1736_0.tar.bz2,conda,0.5,conda-forge,['main'],,,,,,,,,,,RedLionfish.RedLionfish_widget,RedLionfish_widget,False,,,,,,,,,,,,,,,,,,,,,,,0.10,conda-forge/redlionfish/0.10,,,,,conda,win-64/redlionfish-0.5-py38haa244fe_0.tar.bz2,0.0,Apache-2.0,False,,"['numpy', 'pyopencl', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'reikna', 'scipy']",win-64,1637721964063.0,x86_64-any-win32,py38haa244fe_0,2021-11-24 02:47:56.439000+00:00,dfd811b6464af8e23abdd3a56301908e,None,28466.0,conda-forge/redlionfish/0.5/win-64/redlionfish-0.5-py38haa244fe_0.tar.bz2,//api.anaconda.org/download/conda-forge/redlionfish/0.5/win-64/redlionfish-0.5-py38haa244fe_0.tar.bz2,conda,0.5,conda-forge,['main'],conda,win-64/redlionfish-0.5-py37h03978a9_0.tar.bz2,0.0,Apache-2.0,False,,"['numpy', 'pyopencl', 'python >=3.7,<3.8.0a0', 'python_abi 3.7.* *_cp37m', 'reikna', 'scipy']",win-64,1637721973793.0,x86_64-any-win32,py37h03978a9_0,2021-11-24 02:48:04.834000+00:00,1ef27e2e7fb17d76b40476fd226844e8,None,28494.0,conda-forge/redlionfish/0.5/win-64/redlionfish-0.5-py37h03978a9_0.tar.bz2,//api.anaconda.org/download/conda-forge/redlionfish/0.5/win-64/redlionfish-0.5-py37h03978a9_0.tar.bz2,conda,0.5,conda-forge,['main'],conda,osx-64/redlionfish-0.5-py37hf985489_0.tar.bz2,x86_64-any-darwin,False,osx-64,py37hf985489_0,0.0,"['numpy', 'pyopencl', 'python >=3.7,<3.8.0a0', 'python_abi 3.7.* *_cp37m', 'reikna', 'scipy']",Apache-2.0,,1637722044006.0,2021-11-24 02:48:12.715000+00:00,5c84eb98313f082413eeac638dcc4d8b,None,28037.0,conda-forge/redlionfish/0.5/osx-64/redlionfish-0.5-py37hf985489_0.tar.bz2,//api.anaconda.org/download/conda-forge/redlionfish/0.5/osx-64/redlionfish-0.5-py37hf985489_0.tar.bz2,conda,0.5,conda-forge,['main'],,,,,,,,,,,conda,osx-64/redlionfish-0.5-py39h6e9494a_0.tar.bz2,0.0,Apache-2.0,False,,"['numpy', 'pyopencl', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'reikna', 'scipy']",osx-64,1637722057533.0,x86_64-any-darwin,py39h6e9494a_0,2021-11-24 02:48:23.682000+00:00,63b08f799313201d54e56e08f8c08cfa,None,27987.0,conda-forge/redlionfish/0.5/osx-64/redlionfish-0.5-py39h6e9494a_0.tar.bz2,//api.anaconda.org/download/conda-forge/redlionfish/0.5/osx-64/redlionfish-0.5-py39h6e9494a_0.tar.bz2,conda,0.5,conda-forge,['main'],conda,win-64/redlionfish-0.5-py39hcbf5309_0.tar.bz2,x86_64-any-win32,False,win-64,py39hcbf5309_0,0.0,"['numpy', 'pyopencl', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'reikna', 'scipy']",Apache-2.0,,1637722030240.0,2021-11-24 02:49:12.672000+00:00,8c44c2c3b99228d52b42243972f91d8a,None,28433.0,conda-forge/redlionfish/0.5/win-64/redlionfish-0.5-py39hcbf5309_0.tar.bz2,//api.anaconda.org/download/conda-forge/redlionfish/0.5/win-64/redlionfish-0.5-py39hcbf5309_0.tar.bz2,conda,0.5,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,conda,linux-64/redlionfish-0.5-py38h578d9bd_1.tar.bz2,x86_64-any-linux,False,linux-64,py38h578d9bd_1,1.0,"['numpy', 'ocl-icd-system', 'pyopencl', 'python >=3.8,<3.9.0a0', 'python_abi 3.8.* *_cp38', 'reikna', 'scipy']",Apache-2.0,,1637771092600.0,2021-11-24 16:25:17.786000+00:00,4dfe07f7a7480a80fb54d14a7161663f,None,28004.0,conda-forge/redlionfish/0.5/linux-64/redlionfish-0.5-py38h578d9bd_1.tar.bz2,//api.anaconda.org/download/conda-forge/redlionfish/0.5/linux-64/redlionfish-0.5-py38h578d9bd_1.tar.bz2,conda,0.5,conda-forge,['main'],conda,linux-64/redlionfish-0.5-py310hff52083_1.tar.bz2,x86_64-any-linux,False,linux-64,py310hff52083_1,1.0,"['numpy', 'ocl-icd-system', 'pyopencl', 'python >=3.10,<3.11.0a0', 'python_abi 3.10.* *_cp310', 'reikna', 'scipy']",Apache-2.0,,1637771095243.0,2021-11-24 16:25:32.888000+00:00,3c5e224d6900a628b534ec8283efea67,None,28104.0,conda-forge/redlionfish/0.5/linux-64/redlionfish-0.5-py310hff52083_1.tar.bz2,//api.anaconda.org/download/conda-forge/redlionfish/0.5/linux-64/redlionfish-0.5-py310hff52083_1.tar.bz2,conda,0.5,conda-forge,['main'],,,conda,linux-64/redlionfish-0.5-py39hf3d152e_1.tar.bz2,x86_64-any-linux,False,linux-64,py39hf3d152e_1,1.0,"['numpy', 'ocl-icd-system', 'pyopencl', 'python >=3.9,<3.10.0a0', 'python_abi 3.9.* *_cp39', 'reikna', 'scipy']",Apache-2.0,1637771109161.0,2021-11-24 16:25:38.284000+00:00,738332ccc9ad8ef0f478c09d50fd938d,None,28022.0,conda-forge/redlionfish/0.5/linux-64/redlionfish-0.5-py39hf3d152e_1.tar.bz2,//api.anaconda.org/download/conda-forge/redlionfish/0.5/linux-64/redlionfish-0.5-py39hf3d152e_1.tar.bz2,conda,0.5,conda-forge,['main'],,,conda,linux-64/redlionfish-0.5-py37h89c1867_1.tar.bz2,x86_64-any-linux,False,linux-64,py37h89c1867_1,1.0,"['numpy', 'ocl-icd-system', 'pyopencl', 'python >=3.7,<3.8.0a0', 'python_abi 3.7.* *_cp37m', 'reikna', 'scipy']",Apache-2.0,1637771111233.0,2021-11-24 16:25:40.381000+00:00,21333ac840e9700b2c632b59f7f71fb7,None,28058.0,conda-forge/redlionfish/0.5/linux-64/redlionfish-0.5-py37h89c1867_1.tar.bz2,//api.anaconda.org/download/conda-forge/redlionfish/0.5/linux-64/redlionfish-0.5-py37h89c1867_1.tar.bz2,conda,0.5,conda-forge,['main'],conda,osx-64/redlionfish-0.5-py310h2ec42d9_1.tar.bz2,x86_64-any-darwin,False,osx-64,py310h2ec42d9_1,1.0,"['numpy', 'pyopencl', 'python >=3.10,<3.11.0a0', 'python_abi 3.10.* *_cp310', 'reikna', 'scipy']",Apache-2.0,2021-11-24 16:28:03.752000+00:00,57e23f67068e09068a169c055e2b9971,None,28326.0,conda-forge/redlionfish/0.5/osx-64/redlionfish-0.5-py310h2ec42d9_1.tar.bz2,//api.anaconda.org/download/conda-forge/redlionfish/0.5/osx-64/redlionfish-0.5-py310h2ec42d9_1.tar.bz2,conda,0.5,conda-forge,['main'],,, +451,segment-embryo,0.3,Embryo Segmentation,"3D Segment ascidian embryos using cellpose. The images are first rescaled to be isotropic and then downscaled, before cellpose is used. The resulting labels are upscaled to match the original data.",Volker Baecker," +The MIT License (MIT) + +Copyright (c) 2024 Volker Baecker + +Permission is hereby granted, free of charge, to any person obtaining a copy +of this software and associated documentation files (the ""Software""), to deal +in the Software without restriction, including without limitation the rights +to use, copy, modify, merge, publish, distribute, sublicense, and/or sell +copies of the Software, and to permit persons to whom the Software is +furnished to do so, subject to the following conditions: + +The above copyright notice and this permission notice shall be included in +all copies or substantial portions of the Software. + +THE SOFTWARE IS PROVIDED ""AS IS"", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR +IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, +FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE +AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER +LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, +OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN +THE SOFTWARE. +",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,segment-embryo.make_sample_data,Load sample data from Embryo Segmentation,segment_embryo._sample_data:make_sample_data,,,,2.1,segment-embryo,0.3,,"3D Segment ascidian embryos using cellpose. The images are first rescaled to be isotropic and then downscaled, before cellpose is used. The resulting labels are upscaled to match the original data.","# segment-embryo + +[![License MIT](https://img.shields.io/pypi/l/segment-embryo.svg?color=green)](https://github.com/MontpellierRessourcesImagerie/segment-embryo/raw/main/LICENSE) +[![PyPI](https://img.shields.io/pypi/v/segment-embryo.svg?color=green)](https://pypi.org/project/segment-embryo) +[![Python Version](https://img.shields.io/pypi/pyversions/segment-embryo.svg?color=green)](https://python.org) +[![tests](https://github.com/MontpellierRessourcesImagerie/segment-embryo/workflows/tests/badge.svg)](https://github.com/MontpellierRessourcesImagerie/segment-embryo/actions) +[![codecov](https://codecov.io/gh/MontpellierRessourcesImagerie/segment-embryo/branch/main/graph/badge.svg)](https://codecov.io/gh/MontpellierRessourcesImagerie/segment-embryo) +[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/segment-embryo)](https://napari-hub.org/plugins/segment-embryo) + +3D Segment ascidian embryos using cellpose. The images are first rescaled to be isotropic and then downscaled, before cellpose is used. The resulting labels are upscaled to match the original data. + +---------------------------------- + +This [napari] plugin was generated with [copier] using the [napari-plugin-template]. + + + +## Installation + +You can install `segment-embryo` via [pip]: + + pip install segment-embryo + + + + +## Contributing + +Contributions are very welcome. Tests can be run with [tox], please ensure +the coverage at least stays the same before you submit a pull request. + +## License + +Distributed under the terms of the [MIT] license, +""segment-embryo"" is free and open source software + +## Issues + +If you encounter any problems, please [file an issue] along with a detailed description. + +[napari]: https://github.com/napari/napari +[copier]: https://copier.readthedocs.io/en/stable/ +[@napari]: https://github.com/napari +[MIT]: http://opensource.org/licenses/MIT +[BSD-3]: http://opensource.org/licenses/BSD-3-Clause +[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt +[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt +[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0 +[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt +[napari-plugin-template]: https://github.com/napari/napari-plugin-template + +[napari]: https://github.com/napari/napari +[tox]: https://tox.readthedocs.io/en/latest/ +[pip]: https://pypi.org/project/pip/ +[PyPI]: https://pypi.org/ +",text/markdown,,Volker Baecker,volker.baecker@mri.cnrs.fr," +The MIT License (MIT) + +Copyright (c) 2024 Volker Baecker + +Permission is hereby granted, free of charge, to any person obtaining a copy +of this software and associated documentation files (the ""Software""), to deal +in the Software without restriction, including without limitation the rights +to use, copy, modify, merge, publish, distribute, sublicense, and/or sell +copies of the Software, and to permit persons to whom the Software is +furnished to do so, subject to the following conditions: + +The above copyright notice and this permission notice shall be included in +all copies or substantial portions of the Software. + +THE SOFTWARE IS PROVIDED ""AS IS"", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR +IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, +FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE +AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER +LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, +OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN +THE SOFTWARE. +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', 'cellpose', 'czifile', 'napari-czifile2', 'set-calibration', 'big-fish', 'napari-bigfish', 'scikit-image', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""', 'numpy; extra == ""testing""']",>=3.9,"['Homepage, https://github.com/MontpellierRessourcesImagerie/segment-embryo', 'Documentation, https://github.com/MontpellierRessourcesImagerie/segment-embryo#segment-embryo', 'Repository, https://github.com/MontpellierRessourcesImagerie/segment-embryo.git', 'Issues, https://github.com/MontpellierRessourcesImagerie/segment-embryo/issues', 'Changelog, https://github.com/MontpellierRessourcesImagerie/segment-embryo/releases']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Segmentation', 'Acquisition']",segment-embryo.make_qwidget,Embryo Segmentation,segment_embryo:EmbryoSegmentationWidget,,,,,,,segment-embryo.make_qwidget,Embryo Segmentation Widget,False,,,,,,,,,,,,,,,,,,,,segment-embryo.make_sample_data,unique_id.1,Embryo Segmentation,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +452,set-calibration,0.0.1,Calibration Tool,"""A tool allowing to modify the calibration (physical units) of images""",Clement H. Benedetti,MIT,https://github.com/MontpellierRessourcesImagerie/set-calibration,655933eeae25e20714de204f,['conda'],,https://pypi.org/project/set-calibration,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/set-calibration,http://api.anaconda.org/packages/conda-forge/set-calibration,http://anaconda.org/conda-forge/set-calibration,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,https://github.com/MontpellierRessourcesImagerie/set-calibration,['pyh9208f05_0'],0.0.1,conda-forge/set-calibration/0.0.1,1.0,0.0,2023-11-18 22:00:11.071000+00:00,2023-11-18 22:00:14.531000+00:00,conda,noarch/set-calibration-0.0.1-pyh9208f05_0.conda,0.0,MIT,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'qtpy', 'scikit-image']",noarch,1700344690722.0,None-any-None,pyh9208f05_0,2023-11-18 22:00:11.494000+00:00,f62820b5824eab0116c8aa54b5248903,9f5f00dd93cede6163706be96d8451075f9206089cfc6bc10f7a6eee2d6d0f19,11988.0,conda-forge/set-calibration/0.0.1/noarch/set-calibration-0.0.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/set-calibration/0.0.1/noarch/set-calibration-0.0.1-pyh9208f05_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,set-calibration.create_scale_panel,Instanciate a scale-edition panel.,set_calibration:LayerScaleWidget,,,,2.1,set-calibration,0.0.1,,"""A tool allowing to modify the calibration (physical units) of images""","# set-calibration [![License MIT](https://img.shields.io/pypi/l/set-calibration.svg?color=green)](https://github.com/MontpellierRessourcesImagerie/set-calibration/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/set-calibration.svg?color=green)](https://pypi.org/project/set-calibration) @@ -45905,20 +48274,20 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/MontpellierRessourcesImagerie/set-calibration,Clement H. Benedetti,clement.benedetti@mri.cnrs.fr,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/MontpellierRessourcesImagerie/set-calibration/issues', 'Documentation, https://github.com/MontpellierRessourcesImagerie/set-calibration#README.md', 'Source Code, https://github.com/MontpellierRessourcesImagerie/set-calibration', 'User Support, https://github.com/MontpellierRessourcesImagerie/set-calibration/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Measurement', 'Transformations', 'Visualization']",,,,,,,,,,set-calibration.create_scale_panel,Scale Tool,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -429,skan,0.11.1,skan,Skeleton analysis in Python,Juan Nunez-Iglesias,BSD 3-Clause,https://jni.github.io/skan,58236000bf2f820efe5c2c28,['conda'],"skan: skeleton analysis in Python. +",text/markdown,https://github.com/MontpellierRessourcesImagerie/set-calibration,Clement H. Benedetti,clement.benedetti@mri.cnrs.fr,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/MontpellierRessourcesImagerie/set-calibration/issues', 'Documentation, https://github.com/MontpellierRessourcesImagerie/set-calibration#README.md', 'Source Code, https://github.com/MontpellierRessourcesImagerie/set-calibration', 'User Support, https://github.com/MontpellierRessourcesImagerie/set-calibration/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Measurement', 'Transformations', 'Visualization']",,,,,,,,,,set-calibration.create_scale_panel,Scale Tool,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +453,skan,0.12.1,skan,Skeleton analysis in Python,,BSD 3-Clause,,58236000bf2f820efe5c2c28,['conda'],"skan: skeleton analysis in Python. Inspired by the ""Analyze skeletons"" Fiji plugin by Ignacio Arganda-Carreras. -",http://github.com/jni/skan,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/skan,http://api.anaconda.org/packages/conda-forge/skan,http://anaconda.org/conda-forge/skan,"['0.1.3', '0.2', '0.3.4', '0.3.5', '0.3.6', '0.5.2', '0.6.1', '0.6.2', '0.7.1', '0.8', '0.9', '0.10.0', '0.11.0', '0.11.1']",0.11.0,0.11.1,"['linux-64', 'noarch', 'osx-64', 'win-32', 'win-64']",18.0,https://github.com/jni/skan,"['py35_0', 'py36_0', 'py_0', 'py_1', 'pyhd8ed1ab_0']",0.1.3,conda-forge/skan/0.1.3,1.0,0.0,2021-05-03 08:23:28.449000+00:00,2023-06-23 12:46:19.608000+00:00,conda,linux-64/skan-0.1.3-py35_0.tar.bz2,0.0,BSD 3-clause,False,,"['networkx >=1.11', 'numba >=0.29', 'numpy >=1.11', 'pandas >=0.18', 'python 3.5*', 'scipy >=0.18']",linux-64,,x86_64-any-linux,py35_0,2016-11-09 17:42:24.674000+00:00,66d6d9beaa07b93eba8c12bf8b28eda5,None,222674.0,conda-forge/skan/0.1.3/linux-64/skan-0.1.3-py35_0.tar.bz2,//api.anaconda.org/download/conda-forge/skan/0.1.3/linux-64/skan-0.1.3-py35_0.tar.bz2,conda,0.1.3,conda-forge,"['main', 'cf201901', 'cf202003']",public,,0.1.0,skan.skeletonize_labels,Skeletonize labels...,skan.napari_skan:skeletonize_labels,,,,2.1,skan,0.11.1,,Skeleton analysis in Python,"# skan: skeleton analysis in Python +",http://github.com/jni/skan,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/skan,http://api.anaconda.org/packages/conda-forge/skan,http://anaconda.org/conda-forge/skan,"['0.1.3', '0.2', '0.3.4', '0.3.5', '0.3.6', '0.5.2', '0.6.1', '0.6.2', '0.7.1', '0.8', '0.9', '0.10.0', '0.11.0', '0.11.1', '0.12.0', '0.12.1']",0.12.1,0.12.1,"['linux-64', 'noarch', 'osx-64', 'win-32', 'win-64']",17.0,https://github.com/jni/skan,"['py35_0', 'py36_0', 'py_0', 'py_1', 'pyhd8ed1ab_0']",0.1.3,conda-forge/skan/0.1.3,1.0,0.0,2021-05-03 08:23:28.449000+00:00,2024-11-25 11:45:36.700000+00:00,conda,linux-64/skan-0.1.3-py35_0.tar.bz2,0.0,BSD 3-clause,False,,"['networkx >=1.11', 'numba >=0.29', 'numpy >=1.11', 'pandas >=0.18', 'python 3.5*', 'scipy >=0.18']",linux-64,,x86_64-any-linux,py35_0,2016-11-09 17:42:24.674000+00:00,66d6d9beaa07b93eba8c12bf8b28eda5,None,222674.0,conda-forge/skan/0.1.3/linux-64/skan-0.1.3-py35_0.tar.bz2,//api.anaconda.org/download/conda-forge/skan/0.1.3/linux-64/skan-0.1.3-py35_0.tar.bz2,conda,0.1.3,conda-forge,"['main', 'cf201901', 'cf202003']",public,,0.1.0,skan.skeletonize,Make Skeleton,skan.napari_skan:labels_to_skeleton_shapes,,,,2.1,skan,0.12.1,,Skeleton analysis in Python,"# skan: skeleton analysis in Python Python module to analyse skeleton (thin object) images [![Binder](https://mybinder.org/badge.svg)](https://mybinder.org/v2/gh/jni/skan/main?filepath=doc%2Fgetting_started.ipynb) [![Coverage Status](https://coveralls.io/repos/github/jni/skan/badge.svg?branch=main)](https://coveralls.io/github/jni/skan?branch=master) See the documentation at [https://skeleton-analysis.org](https://skeleton-analysis.org). -",text/markdown,https://jni.github.io/skan,Juan Nunez-Iglesias,juan.nunez-iglesias@monash.edu,BSD 3-Clause,"['Development Status :: 3 - Alpha', 'Environment :: Console', 'Intended Audience :: Developers', 'Intended Audience :: Education', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: BSD License', 'Programming Language :: Python', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering', 'Operating System :: Microsoft :: Windows', 'Operating System :: POSIX', 'Operating System :: Unix', 'Operating System :: MacOS', 'Framework :: napari']","['imageio (>=2.10.1)', 'matplotlib (>=3.4)', 'networkx (>=2.7)', 'numba (>=0.53)', 'numpy (>=1.21)', 'pandas (>=2.0.2)', 'openpyxl (>=2.6)', 'scikit-image (>=0.17.1)', 'scipy (>=1.7)', 'toolz (>=0.10.0)', 'tqdm (>=4.57.0)', ""scikit-image[data] ; extra == 'all'"", ""napari[all] (<0.4.18) ; extra == 'docs'"", ""sphinx ; extra == 'docs'"", ""jupyter ; extra == 'docs'"", ""notebook ; extra == 'docs'"", ""seaborn (<1.0) ; extra == 'docs'"", ""sphinx-toggleprompt ; extra == 'docs'"", ""sphinx-copybutton ; extra == 'docs'"", ""sphinxcontrib-bibtex ; extra == 'docs'"", ""myst-nb ; extra == 'docs'"", ""zarr ; extra == 'docs'"", ""pydata-sphinx-theme (==0.8.1) ; extra == 'docs'"", ""coverage ; extra == 'testing'"", ""hypothesis ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""seaborn (<1.0) ; extra == 'testing'"", ""tifffile ; extra == 'testing'""]",>=3.8,,"['all', 'docs', 'testing']",False,0.2,conda-forge/skan/0.2,0.3.4,conda-forge/skan/0.3.4,0.3.5,conda-forge/skan/0.3.5,conda,win-32/skan-0.1.3-py35_0.tar.bz2,0.0,BSD 3-clause,False,,"['networkx >=1.11', 'numba >=0.29', 'numpy >=1.11', 'pandas >=0.18', 'python 3.5*', 'scipy >=0.18']",py35_0,,x86-any-win32,win-32,2016-11-09 18:38:42.105000+00:00,458cfdc635b5be284331d4714b764bc0,None,222775.0,conda-forge/skan/0.1.3/win-32/skan-0.1.3-py35_0.tar.bz2,//api.anaconda.org/download/conda-forge/skan/0.1.3/win-32/skan-0.1.3-py35_0.tar.bz2,conda,0.1.3,conda-forge,"['main', 'cf201901', 'cf202003']",conda,win-64/skan-0.1.3-py35_0.tar.bz2,0.0,BSD 3-clause,False,,"['networkx >=1.11', 'numba >=0.29', 'numpy >=1.11', 'pandas >=0.18', 'python 3.5*', 'scipy >=0.18']",win-64,,x86_64-any-win32,py35_0,2016-11-09 18:41:49.968000+00:00,d85b837c98d322d565d90ca2c917bf6a,None,222753.0,conda-forge/skan/0.1.3/win-64/skan-0.1.3-py35_0.tar.bz2,//api.anaconda.org/download/conda-forge/skan/0.1.3/win-64/skan-0.1.3-py35_0.tar.bz2,conda,0.1.3,conda-forge,"['main', 'cf201901', 'cf202003']",conda,osx-64/skan-0.1.3-py35_0.tar.bz2,x86_64-any-darwin,False,osx-64,py35_0,0.0,"['networkx >=1.11', 'numba >=0.29', 'numpy >=1.11', 'pandas >=0.18', 'python 3.5*', 'scipy >=0.18']",BSD 3-clause,,,2016-11-09 19:02:38.660000+00:00,30fba48ce81a0e95dc97d900ffc5d9ba,None,222780.0,conda-forge/skan/0.1.3/osx-64/skan-0.1.3-py35_0.tar.bz2,//api.anaconda.org/download/conda-forge/skan/0.1.3/osx-64/skan-0.1.3-py35_0.tar.bz2,conda,0.1.3,conda-forge,"['main', 'cf201901', 'cf202003']",,,,,,,,,,,skan.skeletonize_labels,Skeletonize labels...,True,,,,,,,,,,,,,,,,,,,,,,,0.3.6,conda-forge/skan/0.3.6,0.5.2,conda-forge/skan/0.5.2,0.6.1,conda-forge/skan/0.6.1,conda,linux-64/skan-0.2-py35_0.tar.bz2,0.0,BSD 3-clause,False,,"['matplotlib >=1.5', 'networkx >=1.11', 'numba >=0.29', 'numpy >=1.11', 'pandas >=0.18', 'python 3.5*', 'scikit-image >=0.12', 'scipy >=0.18']",linux-64,,x86_64-any-linux,py35_0,2016-12-20 03:25:04.588000+00:00,df0d090b821891ad43a6ede1e805c898,None,232020.0,conda-forge/skan/0.2/linux-64/skan-0.2-py35_0.tar.bz2,//api.anaconda.org/download/conda-forge/skan/0.2/linux-64/skan-0.2-py35_0.tar.bz2,conda,0.2,conda-forge,"['main', 'cf201901', 'cf202003']",conda,osx-64/skan-0.2-py35_0.tar.bz2,0.0,BSD 3-clause,False,,"['matplotlib >=1.5', 'networkx >=1.11', 'numba >=0.29', 'numpy >=1.11', 'pandas >=0.18', 'python 3.5*', 'scikit-image >=0.12', 'scipy >=0.18']",osx-64,,x86_64-any-darwin,py35_0,2016-12-20 03:27:15.250000+00:00,2f4ab9fb9e8f6f2d6d40c3df5ace483b,None,232087.0,conda-forge/skan/0.2/osx-64/skan-0.2-py35_0.tar.bz2,//api.anaconda.org/download/conda-forge/skan/0.2/osx-64/skan-0.2-py35_0.tar.bz2,conda,0.2,conda-forge,"['main', 'cf201901', 'cf202003']",conda,win-32/skan-0.2-py35_0.tar.bz2,x86-any-win32,False,win-32,py35_0,0.0,"['matplotlib >=1.5', 'networkx >=1.11', 'numba >=0.29', 'numpy >=1.11', 'pandas >=0.18', 'python 3.5*', 'scikit-image >=0.12', 'scipy >=0.18']",BSD 3-clause,,,2016-12-20 03:49:05.669000+00:00,47382c6a9eb9ea1d3c61208b1fa6564b,None,232066.0,conda-forge/skan/0.2/win-32/skan-0.2-py35_0.tar.bz2,//api.anaconda.org/download/conda-forge/skan/0.2/win-32/skan-0.2-py35_0.tar.bz2,conda,0.2,conda-forge,"['main', 'cf201901', 'cf202003']",,,,,,,0.6.2,conda-forge/skan/0.6.2,0.7.1,conda-forge/skan/0.7.1,conda,win-64/skan-0.2-py35_0.tar.bz2,0.0,BSD 3-clause,False,,"['matplotlib >=1.5', 'networkx >=1.11', 'numba >=0.29', 'numpy >=1.11', 'pandas >=0.18', 'python 3.5*', 'scikit-image >=0.12', 'scipy >=0.18']",win-64,,x86_64-any-win32,py35_0,2016-12-20 03:49:15.419000+00:00,7ed3e4064041ad71da5797a91c030d94,None,232102.0,conda-forge/skan/0.2/win-64/skan-0.2-py35_0.tar.bz2,//api.anaconda.org/download/conda-forge/skan/0.2/win-64/skan-0.2-py35_0.tar.bz2,conda,0.2,conda-forge,"['main', 'cf201901', 'cf202003']",conda,linux-64/skan-0.3.4-py35_0.tar.bz2,x86_64-any-linux,True,linux-64,py35_0,0.0,"['imageio >=2.0', 'matplotlib >=1.5', 'networkx >=1.11', 'nose >=1.3', 'numba >=0.29', 'numpy >=1.11', 'pandas >=0.18', 'python 3.5*', 'scikit-image >=0.12', 'scipy >=0.18', 'tqdm >=4.11']",BSD 3-clause,,,2017-01-20 04:06:56.563000+00:00,27896ce773d38da8f3e7f70d68e6fefc,None,30058.0,conda-forge/skan/0.3.4/linux-64/skan-0.3.4-py35_0.tar.bz2,//api.anaconda.org/download/conda-forge/skan/0.3.4/linux-64/skan-0.3.4-py35_0.tar.bz2,conda,0.3.4,conda-forge,"['main', 'cf201901', 'cf202003']",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,conda,win-32/skan-0.3.4-py35_0.tar.bz2,x86-any-win32,True,win-32,py35_0,0.0,"['imageio >=2.0', 'matplotlib >=1.5', 'networkx >=1.11', 'nose >=1.3', 'numba >=0.29', 'numpy >=1.11', 'pandas >=0.18', 'python 3.5*', 'scikit-image >=0.12', 'scipy >=0.18', 'tqdm >=4.11']",BSD 3-clause,,,2017-01-20 04:11:55.031000+00:00,ed24a9410bbf6f56362b09fde0ad19cb,None,69693.0,conda-forge/skan/0.3.4/win-32/skan-0.3.4-py35_0.tar.bz2,//api.anaconda.org/download/conda-forge/skan/0.3.4/win-32/skan-0.3.4-py35_0.tar.bz2,conda,0.3.4,conda-forge,"['main', 'cf201901', 'cf202003']",0.8,conda-forge/skan/0.8,conda,win-64/skan-0.3.4-py35_0.tar.bz2,x86_64-any-win32,True,win-64,py35_0,0.0,"['imageio >=2.0', 'matplotlib >=1.5', 'networkx >=1.11', 'nose >=1.3', 'numba >=0.29', 'numpy >=1.11', 'pandas >=0.18', 'python 3.5*', 'scikit-image >=0.12', 'scipy >=0.18', 'tqdm >=4.11']",BSD 3-clause,,2017-01-20 04:14:26.617000+00:00,3d307596d4e1213df2612e5e34a20385,None,72541.0,conda-forge/skan/0.3.4/win-64/skan-0.3.4-py35_0.tar.bz2,//api.anaconda.org/download/conda-forge/skan/0.3.4/win-64/skan-0.3.4-py35_0.tar.bz2,conda,0.3.4,conda-forge,"['main', 'cf201901', 'cf202003']",conda,osx-64/skan-0.3.4-py35_0.tar.bz2,x86_64-any-darwin,True,osx-64,py35_0,0.0,"['imageio >=2.0', 'matplotlib >=1.5', 'networkx >=1.11', 'nose >=1.3', 'numba >=0.29', 'numpy >=1.11', 'pandas >=0.18', 'python 3.5*', 'scikit-image >=0.12', 'scipy >=0.18', 'tqdm >=4.11']",BSD 3-clause,,2017-01-21 09:00:45.347000+00:00,fc6364f6d0c72c34c91dd48a2cc1f122,None,30019.0,conda-forge/skan/0.3.4/osx-64/skan-0.3.4-py35_0.tar.bz2,//api.anaconda.org/download/conda-forge/skan/0.3.4/osx-64/skan-0.3.4-py35_0.tar.bz2,conda,0.3.4,conda-forge,"['main', 'cf201901', 'cf202003']",conda,linux-64/skan-0.3.5-py35_0.tar.bz2,x86_64-any-linux,True,linux-64,py35_0,0.0,"['imageio >=2.0', 'matplotlib >=1.5', 'networkx >=1.11', 'nose >=1.3', 'numba >=0.29', 'numpy >=1.11', 'pandas >=0.18', 'python 3.5*', 'scikit-image >=0.12', 'scipy >=0.18', 'tqdm >=4.11']",BSD 3-clause,,2017-01-23 03:47:08.347000+00:00,cc44e2bfe4bb83aac68c9375066ffceb,None,30551.0,conda-forge/skan/0.3.5/linux-64/skan-0.3.5-py35_0.tar.bz2,//api.anaconda.org/download/conda-forge/skan/0.3.5/linux-64/skan-0.3.5-py35_0.tar.bz2,conda,0.3.5,conda-forge,"['main', 'cf201901', 'cf202003']",,, -430,smo,2.0.2,smo,Implementation of the Silver Mountain Operator (SMO) for the estimation of background distributions.,Mauro Silberberg,MIT,https://github.com/maurosilber/smo,61f3ca40061d72975ee43712,['conda'],,https://github.com/maurosilber/smo,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/smo,http://api.anaconda.org/packages/conda-forge/smo,http://anaconda.org/conda-forge/smo,"['2.0.0', '2.0.1', '2.0.2']",2.0.2,2.0.2,['noarch'],5.0,,['pyhd8ed1ab_0'],2.0.0,conda-forge/smo/2.0.0,1.0,0.0,2022-01-28 10:49:34.460000+00:00,2023-06-18 08:40:39.081000+00:00,conda,noarch/smo-2.0.0-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['numpy', 'python >=3.7', 'scipy', 'typing-extensions']",noarch,1643366934375.0,None-any-None,pyhd8ed1ab_0,2022-01-28 10:49:35.047000+00:00,f79582cebf8480bb7c0578f90ba38543,None,705191.0,conda-forge/smo/2.0.0/noarch/smo-2.0.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/smo/2.0.0/noarch/smo-2.0.0-pyhd8ed1ab_0.tar.bz2,conda,2.0.0,conda-forge,['main'],public,,0.2.1,smo.napari_experimental_provide_function,smo_image,smo.plugins.napari:napari_experimental_provide_function,,,,2.1,smo,2.0.2,,Implementation of the Silver Mountain Operator (SMO) for the estimation of background distributions.,"![PyPi](https://img.shields.io/pypi/pyversions/smo.svg) +",text/markdown,,,Juan Nunez-Iglesias ,BSD 3-Clause,"['Development Status :: 3 - Alpha', 'Environment :: Console', 'Intended Audience :: Developers', 'Intended Audience :: Education', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: BSD License', 'Programming Language :: Python', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering', 'Operating System :: Microsoft :: Windows', 'Operating System :: POSIX', 'Operating System :: Unix', 'Operating System :: MacOS', 'Framework :: napari']","['imageio>=2.10.1', 'magicgui>=0.7.3', 'matplotlib>=3.4', 'networkx>=2.7', 'numba>=0.53', 'numpy>=1.25', 'pandas>=2.0.2', 'openpyxl>=2.6', 'scikit-image>=0.17.1', 'scipy>=1.7', 'toolz>=0.10.0', 'tqdm>=4.57.0', 'scikit-image[data]; extra == ""all""', 'coverage; extra == ""testing""', 'hypothesis; extra == ""testing""', 'napari[pyqt5]>=0.4.19rc1; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'seaborn<1.0; extra == ""testing""', 'tifffile; extra == ""testing""', 'napari[all]>=0.4.19rc1; extra == ""docs""', 'sphinx; extra == ""docs""', 'jupyter; extra == ""docs""', 'notebook; extra == ""docs""', 'seaborn<1.0,>=0.13; extra == ""docs""', 'sphinx-toggleprompt; extra == ""docs""', 'sphinx-copybutton; extra == ""docs""', 'sphinxcontrib-bibtex; extra == ""docs""', 'myst-nb; extra == ""docs""', 'zarr; extra == ""docs""', 'pydata-sphinx-theme<1.0; extra == ""docs""']",>=3.9,"['Source, https://github.com/jni/skan', 'Bug_Tracker, https://github.com/jni//issues', 'Documentation, https://skeleton-analysis.org/stable/']","['all', 'testing', 'docs']",False,0.2,conda-forge/skan/0.2,0.3.4,conda-forge/skan/0.3.4,0.3.5,conda-forge/skan/0.3.5,conda,win-32/skan-0.1.3-py35_0.tar.bz2,0.0,BSD 3-clause,False,,"['networkx >=1.11', 'numba >=0.29', 'numpy >=1.11', 'pandas >=0.18', 'python 3.5*', 'scipy >=0.18']",py35_0,,x86-any-win32,win-32,2016-11-09 18:38:42.105000+00:00,458cfdc635b5be284331d4714b764bc0,None,222775.0,conda-forge/skan/0.1.3/win-32/skan-0.1.3-py35_0.tar.bz2,//api.anaconda.org/download/conda-forge/skan/0.1.3/win-32/skan-0.1.3-py35_0.tar.bz2,conda,0.1.3,conda-forge,"['main', 'cf201901', 'cf202003']",conda,win-64/skan-0.1.3-py35_0.tar.bz2,0.0,BSD 3-clause,False,,"['networkx >=1.11', 'numba >=0.29', 'numpy >=1.11', 'pandas >=0.18', 'python 3.5*', 'scipy >=0.18']",win-64,,x86_64-any-win32,py35_0,2016-11-09 18:41:49.968000+00:00,d85b837c98d322d565d90ca2c917bf6a,None,222753.0,conda-forge/skan/0.1.3/win-64/skan-0.1.3-py35_0.tar.bz2,//api.anaconda.org/download/conda-forge/skan/0.1.3/win-64/skan-0.1.3-py35_0.tar.bz2,conda,0.1.3,conda-forge,"['main', 'cf201901', 'cf202003']",conda,osx-64/skan-0.1.3-py35_0.tar.bz2,x86_64-any-darwin,False,osx-64,py35_0,0.0,"['networkx >=1.11', 'numba >=0.29', 'numpy >=1.11', 'pandas >=0.18', 'python 3.5*', 'scipy >=0.18']",BSD 3-clause,,,2016-11-09 19:02:38.660000+00:00,30fba48ce81a0e95dc97d900ffc5d9ba,None,222780.0,conda-forge/skan/0.1.3/osx-64/skan-0.1.3-py35_0.tar.bz2,//api.anaconda.org/download/conda-forge/skan/0.1.3/osx-64/skan-0.1.3-py35_0.tar.bz2,conda,0.1.3,conda-forge,"['main', 'cf201901', 'cf202003']",,skan.color_widget,Color Widget,skan.napari_skan:color_by_feature,,,,,,,skan.skeletonize,Skeleton Widget,True,skan.color_widget,Color Skeleton Widget,False,,,,,,,,,,,,,,,,,,,,0.3.6,conda-forge/skan/0.3.6,0.5.2,conda-forge/skan/0.5.2,0.6.1,conda-forge/skan/0.6.1,conda,linux-64/skan-0.2-py35_0.tar.bz2,0.0,BSD 3-clause,False,,"['matplotlib >=1.5', 'networkx >=1.11', 'numba >=0.29', 'numpy >=1.11', 'pandas >=0.18', 'python 3.5*', 'scikit-image >=0.12', 'scipy >=0.18']",linux-64,,x86_64-any-linux,py35_0,2016-12-20 03:25:04.588000+00:00,df0d090b821891ad43a6ede1e805c898,None,232020.0,conda-forge/skan/0.2/linux-64/skan-0.2-py35_0.tar.bz2,//api.anaconda.org/download/conda-forge/skan/0.2/linux-64/skan-0.2-py35_0.tar.bz2,conda,0.2,conda-forge,"['main', 'cf201901', 'cf202003']",conda,osx-64/skan-0.2-py35_0.tar.bz2,0.0,BSD 3-clause,False,,"['matplotlib >=1.5', 'networkx >=1.11', 'numba >=0.29', 'numpy >=1.11', 'pandas >=0.18', 'python 3.5*', 'scikit-image >=0.12', 'scipy >=0.18']",osx-64,,x86_64-any-darwin,py35_0,2016-12-20 03:27:15.250000+00:00,2f4ab9fb9e8f6f2d6d40c3df5ace483b,None,232087.0,conda-forge/skan/0.2/osx-64/skan-0.2-py35_0.tar.bz2,//api.anaconda.org/download/conda-forge/skan/0.2/osx-64/skan-0.2-py35_0.tar.bz2,conda,0.2,conda-forge,"['main', 'cf201901', 'cf202003']",conda,win-32/skan-0.2-py35_0.tar.bz2,x86-any-win32,False,win-32,py35_0,0.0,"['matplotlib >=1.5', 'networkx >=1.11', 'numba >=0.29', 'numpy >=1.11', 'pandas >=0.18', 'python 3.5*', 'scikit-image >=0.12', 'scipy >=0.18']",BSD 3-clause,,,2016-12-20 03:49:05.669000+00:00,47382c6a9eb9ea1d3c61208b1fa6564b,None,232066.0,conda-forge/skan/0.2/win-32/skan-0.2-py35_0.tar.bz2,//api.anaconda.org/download/conda-forge/skan/0.2/win-32/skan-0.2-py35_0.tar.bz2,conda,0.2,conda-forge,"['main', 'cf201901', 'cf202003']",,,,,,,0.6.2,conda-forge/skan/0.6.2,0.7.1,conda-forge/skan/0.7.1,conda,win-64/skan-0.2-py35_0.tar.bz2,0.0,BSD 3-clause,False,,"['matplotlib >=1.5', 'networkx >=1.11', 'numba >=0.29', 'numpy >=1.11', 'pandas >=0.18', 'python 3.5*', 'scikit-image >=0.12', 'scipy >=0.18']",win-64,,x86_64-any-win32,py35_0,2016-12-20 03:49:15.419000+00:00,7ed3e4064041ad71da5797a91c030d94,None,232102.0,conda-forge/skan/0.2/win-64/skan-0.2-py35_0.tar.bz2,//api.anaconda.org/download/conda-forge/skan/0.2/win-64/skan-0.2-py35_0.tar.bz2,conda,0.2,conda-forge,"['main', 'cf201901', 'cf202003']",conda,linux-64/skan-0.3.4-py35_0.tar.bz2,x86_64-any-linux,True,linux-64,py35_0,0.0,"['imageio >=2.0', 'matplotlib >=1.5', 'networkx >=1.11', 'nose >=1.3', 'numba >=0.29', 'numpy >=1.11', 'pandas >=0.18', 'python 3.5*', 'scikit-image >=0.12', 'scipy >=0.18', 'tqdm >=4.11']",BSD 3-clause,,,2017-01-20 04:06:56.563000+00:00,27896ce773d38da8f3e7f70d68e6fefc,None,30058.0,conda-forge/skan/0.3.4/linux-64/skan-0.3.4-py35_0.tar.bz2,//api.anaconda.org/download/conda-forge/skan/0.3.4/linux-64/skan-0.3.4-py35_0.tar.bz2,conda,0.3.4,conda-forge,"['main', 'cf201901', 'cf202003']",,,,,,,,,,,,,,,,,,,,,,,,,,,,,conda,win-32/skan-0.3.4-py35_0.tar.bz2,x86-any-win32,True,win-32,py35_0,0.0,"['imageio >=2.0', 'matplotlib >=1.5', 'networkx >=1.11', 'nose >=1.3', 'numba >=0.29', 'numpy >=1.11', 'pandas >=0.18', 'python 3.5*', 'scikit-image >=0.12', 'scipy >=0.18', 'tqdm >=4.11']",BSD 3-clause,,,2017-01-20 04:11:55.031000+00:00,ed24a9410bbf6f56362b09fde0ad19cb,None,69693.0,conda-forge/skan/0.3.4/win-32/skan-0.3.4-py35_0.tar.bz2,//api.anaconda.org/download/conda-forge/skan/0.3.4/win-32/skan-0.3.4-py35_0.tar.bz2,conda,0.3.4,conda-forge,"['main', 'cf201901', 'cf202003']",conda,win-64/skan-0.3.4-py35_0.tar.bz2,x86_64-any-win32,True,win-64,py35_0,0.0,"['imageio >=2.0', 'matplotlib >=1.5', 'networkx >=1.11', 'nose >=1.3', 'numba >=0.29', 'numpy >=1.11', 'pandas >=0.18', 'python 3.5*', 'scikit-image >=0.12', 'scipy >=0.18', 'tqdm >=4.11']",BSD 3-clause,,,2017-01-20 04:14:26.617000+00:00,3d307596d4e1213df2612e5e34a20385,None,72541.0,conda-forge/skan/0.3.4/win-64/skan-0.3.4-py35_0.tar.bz2,//api.anaconda.org/download/conda-forge/skan/0.3.4/win-64/skan-0.3.4-py35_0.tar.bz2,conda,0.3.4,conda-forge,"['main', 'cf201901', 'cf202003']",0.8,conda-forge/skan/0.8,conda,osx-64/skan-0.3.4-py35_0.tar.bz2,x86_64-any-darwin,True,osx-64,py35_0,0.0,"['imageio >=2.0', 'matplotlib >=1.5', 'networkx >=1.11', 'nose >=1.3', 'numba >=0.29', 'numpy >=1.11', 'pandas >=0.18', 'python 3.5*', 'scikit-image >=0.12', 'scipy >=0.18', 'tqdm >=4.11']",BSD 3-clause,,2017-01-21 09:00:45.347000+00:00,fc6364f6d0c72c34c91dd48a2cc1f122,None,30019.0,conda-forge/skan/0.3.4/osx-64/skan-0.3.4-py35_0.tar.bz2,//api.anaconda.org/download/conda-forge/skan/0.3.4/osx-64/skan-0.3.4-py35_0.tar.bz2,conda,0.3.4,conda-forge,"['main', 'cf201901', 'cf202003']",0.9,conda-forge/skan/0.9,conda,linux-64/skan-0.3.5-py35_0.tar.bz2,x86_64-any-linux,True,linux-64,py35_0,0.0,"['imageio >=2.0', 'matplotlib >=1.5', 'networkx >=1.11', 'nose >=1.3', 'numba >=0.29', 'numpy >=1.11', 'pandas >=0.18', 'python 3.5*', 'scikit-image >=0.12', 'scipy >=0.18', 'tqdm >=4.11']",BSD 3-clause,,2017-01-23 03:47:08.347000+00:00,cc44e2bfe4bb83aac68c9375066ffceb,None,30551.0,conda-forge/skan/0.3.5/linux-64/skan-0.3.5-py35_0.tar.bz2,//api.anaconda.org/download/conda-forge/skan/0.3.5/linux-64/skan-0.3.5-py35_0.tar.bz2,conda,0.3.5,conda-forge,"['main', 'cf201901', 'cf202003']",conda,osx-64/skan-0.3.5-py35_0.tar.bz2,x86_64-any-darwin,True,osx-64,py35_0,0.0,"['imageio >=2.0', 'matplotlib >=1.5', 'networkx >=1.11', 'nose >=1.3', 'numba >=0.29', 'numpy >=1.11', 'pandas >=0.18', 'python 3.5*', 'scikit-image >=0.12', 'scipy >=0.18', 'tqdm >=4.11']",BSD 3-clause,2017-01-23 03:59:51.942000+00:00,41dbb57088be69c2736c556d51f934bc,None,30485.0,conda-forge/skan/0.3.5/osx-64/skan-0.3.5-py35_0.tar.bz2,//api.anaconda.org/download/conda-forge/skan/0.3.5/osx-64/skan-0.3.5-py35_0.tar.bz2,conda,0.3.5,conda-forge,"['main', 'cf201901', 'cf202003']",,, +454,smo,2.0.2,smo,Implementation of the Silver Mountain Operator (SMO) for the estimation of background distributions.,Mauro Silberberg,MIT,https://github.com/maurosilber/smo,61f3ca40061d72975ee43712,['conda'],,https://github.com/maurosilber/smo,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/smo,http://api.anaconda.org/packages/conda-forge/smo,http://anaconda.org/conda-forge/smo,"['2.0.0', '2.0.1', '2.0.2']",2.0.2,2.0.2,['noarch'],5.0,,['pyhd8ed1ab_0'],2.0.0,conda-forge/smo/2.0.0,1.0,0.0,2022-01-28 10:49:34.460000+00:00,2023-06-18 08:40:39.081000+00:00,conda,noarch/smo-2.0.0-pyhd8ed1ab_0.tar.bz2,0.0,MIT,False,python,"['numpy', 'python >=3.7', 'scipy', 'typing-extensions']",noarch,1643366934375.0,None-any-None,pyhd8ed1ab_0,2022-01-28 10:49:35.047000+00:00,f79582cebf8480bb7c0578f90ba38543,None,705191.0,conda-forge/smo/2.0.0/noarch/smo-2.0.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/smo/2.0.0/noarch/smo-2.0.0-pyhd8ed1ab_0.tar.bz2,conda,2.0.0,conda-forge,['main'],public,,0.2.1,smo.napari_experimental_provide_function,smo_image,smo.plugins.napari:napari_experimental_provide_function,,,,2.1,smo,2.0.2,,Implementation of the Silver Mountain Operator (SMO) for the estimation of background distributions.,"![PyPi](https://img.shields.io/pypi/pyversions/smo.svg) [![License](https://img.shields.io/github/license/maurosilber/smo)](https://opensource.org/licenses/MIT) [![PyPi](https://img.shields.io/pypi/v/smo.svg)](https://pypi.python.org/pypi/smo) [![Conda](https://img.shields.io/conda/pn/conda-forge/smo)](https://anaconda.org/conda-forge/smo) @@ -46024,8 +48393,8 @@ conda create -n smo python pip numpy scipy pip install -e .[dev] pre-commit install ``` -",text/markdown; charset=UTF-8; variant=GFM,https://github.com/maurosilber/smo,Mauro Silberberg,maurosilber@gmail.com,MIT,"['Intended Audience :: Science/Research', 'License :: OSI Approved :: MIT License', 'Operating System :: MacOS :: MacOS X', 'Operating System :: Microsoft :: Windows', 'Operating System :: POSIX', 'Programming Language :: Python', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering', 'Framework :: napari']","['numpy', 'scipy', 'typing-extensions ; python_version < ""3.9""', ""pre-commit ; extra == 'dev'"", ""pytest ; extra == 'dev'"", ""tox ; extra == 'dev'""]",,,['dev'],True,2.0.1,conda-forge/smo/2.0.1,2.0.2,conda-forge/smo/2.0.2,,,conda,noarch/smo-2.0.1-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['numpy', 'python >=3.7', 'scipy', 'typing-extensions']",pyhd8ed1ab_0,1675272384113.0,None-any-None,noarch,2023-02-01 17:26:54.838000+00:00,160356b340010fb8fac972a618350410,787e76bc44f3dc1d97f5871a5fa171a86b90146e675af8bb2a2e65a23e00dbc8,700784.0,conda-forge/smo/2.0.1/noarch/smo-2.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/smo/2.0.1/noarch/smo-2.0.1-pyhd8ed1ab_0.conda,conda,2.0.1,conda-forge,['main'],conda,noarch/smo-2.0.2-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['numpy', 'python >=3.7', 'scipy', 'typing-extensions']",noarch,1675710505823.0,None-any-None,pyhd8ed1ab_0,2023-02-06 19:09:00.200000+00:00,7e13d23c8bf97bfd4956299826343127,eed3e7f918c1271429ce6c1c607c26e6ba583f117933b227128c699feee6b4ff,700842.0,conda-forge/smo/2.0.2/noarch/smo-2.0.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/smo/2.0.2/noarch/smo-2.0.2-pyhd8ed1ab_0.conda,conda,2.0.2,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,smo.napari_experimental_provide_function,smo_probability,smo.plugins.napari:napari_experimental_provide_function,smo.napari_experimental_provide_function,background_correction,smo.plugins.napari:napari_experimental_provide_function,smo.napari_experimental_provide_function,background_probability,smo.plugins.napari:napari_experimental_provide_function,smo.napari_experimental_provide_function,smo_image,True,smo.napari_experimental_provide_function,smo_probability,True,smo.napari_experimental_provide_function,background_correction,True,smo.napari_experimental_provide_function,background_probability,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -431,snouty-viewer,0.2.5,Snouty Viewer,"A plugin to visualize, deskew, and combine Snouty data.",Austin E. Y. T. Lefebvre,MIT,https://github.com/aelefebv/snouty-viewer,64385fd01c3b6666ad0ca07c,['conda'],,https://github.com/aelefebv/snouty-viewer,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/snouty-viewer,http://api.anaconda.org/packages/conda-forge/snouty-viewer,http://anaconda.org/conda-forge/snouty-viewer,"['0.0.1', '0.2.1']",0.2.1,0.2.1,['noarch'],4.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/snouty-viewer/0.0.1,1.0,0.0,2023-04-13 20:02:20.773000+00:00,2023-06-18 17:28:01.029000+00:00,conda,noarch/snouty-viewer-0.0.1-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'tifffile']",noarch,1681416006319.0,None-any-None,pyhd8ed1ab_0,2023-04-13 20:02:21.786000+00:00,a3f369bbfb77d1af758a9e85fdce97a6,e32be4c491410ef7a463ae215863c06f9e5d5a2aa3081ac7dce4d65c11f8a473,12725.0,conda-forge/snouty-viewer/0.0.1/noarch/snouty-viewer-0.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/snouty-viewer/0.0.1/noarch/snouty-viewer-0.0.1-pyhd8ed1ab_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,snouty-viewer.get_reader,Open snouty data,snouty_viewer._reader:napari_get_reader,snouty-viewer.get_reader,,True,2.1,snouty-viewer,0.2.5,,"A plugin to visualize, deskew, and combine Snouty data.","# snouty-viewer +",text/markdown; charset=UTF-8; variant=GFM,https://github.com/maurosilber/smo,Mauro Silberberg,maurosilber@gmail.com,MIT,"['Intended Audience :: Science/Research', 'License :: OSI Approved :: MIT License', 'Operating System :: MacOS :: MacOS X', 'Operating System :: Microsoft :: Windows', 'Operating System :: POSIX', 'Programming Language :: Python', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering', 'Framework :: napari']","['numpy', 'scipy', 'typing-extensions ; python_version < ""3.9""', ""pre-commit ; extra == 'dev'"", ""pytest ; extra == 'dev'"", ""tox ; extra == 'dev'""]",,,['dev'],True,2.0.1,conda-forge/smo/2.0.1,2.0.2,conda-forge/smo/2.0.2,,,conda,noarch/smo-2.0.1-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['numpy', 'python >=3.7', 'scipy', 'typing-extensions']",pyhd8ed1ab_0,1675272384113.0,None-any-None,noarch,2023-02-01 17:26:54.838000+00:00,160356b340010fb8fac972a618350410,787e76bc44f3dc1d97f5871a5fa171a86b90146e675af8bb2a2e65a23e00dbc8,700784.0,conda-forge/smo/2.0.1/noarch/smo-2.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/smo/2.0.1/noarch/smo-2.0.1-pyhd8ed1ab_0.conda,conda,2.0.1,conda-forge,['main'],conda,noarch/smo-2.0.2-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['numpy', 'python >=3.7', 'scipy', 'typing-extensions']",noarch,1675710505823.0,None-any-None,pyhd8ed1ab_0,2023-02-06 19:09:00.200000+00:00,7e13d23c8bf97bfd4956299826343127,eed3e7f918c1271429ce6c1c607c26e6ba583f117933b227128c699feee6b4ff,700842.0,conda-forge/smo/2.0.2/noarch/smo-2.0.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/smo/2.0.2/noarch/smo-2.0.2-pyhd8ed1ab_0.conda,conda,2.0.2,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,smo.napari_experimental_provide_function,smo_probability,smo.plugins.napari:napari_experimental_provide_function,smo.napari_experimental_provide_function,background_correction,smo.plugins.napari:napari_experimental_provide_function,smo.napari_experimental_provide_function,background_probability,smo.plugins.napari:napari_experimental_provide_function,smo.napari_experimental_provide_function,smo_image,True,smo.napari_experimental_provide_function,smo_probability,True,smo.napari_experimental_provide_function,background_correction,True,smo.napari_experimental_provide_function,background_probability,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +455,snouty-viewer,0.2.5,Snouty Viewer,"A plugin to visualize, deskew, and combine Snouty data.",Austin E. Y. T. Lefebvre,MIT,https://github.com/aelefebv/snouty-viewer,64385fd01c3b6666ad0ca07c,['conda'],,https://github.com/aelefebv/snouty-viewer,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/snouty-viewer,http://api.anaconda.org/packages/conda-forge/snouty-viewer,http://anaconda.org/conda-forge/snouty-viewer,"['0.0.1', '0.2.1']",0.2.1,0.2.1,['noarch'],4.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/snouty-viewer/0.0.1,1.0,0.0,2023-04-13 20:02:20.773000+00:00,2023-06-18 17:28:01.029000+00:00,conda,noarch/snouty-viewer-0.0.1-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8', 'tifffile']",noarch,1681416006319.0,None-any-None,pyhd8ed1ab_0,2023-04-13 20:02:21.786000+00:00,a3f369bbfb77d1af758a9e85fdce97a6,e32be4c491410ef7a463ae215863c06f9e5d5a2aa3081ac7dce4d65c11f8a473,12725.0,conda-forge/snouty-viewer/0.0.1/noarch/snouty-viewer-0.0.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/snouty-viewer/0.0.1/noarch/snouty-viewer-0.0.1-pyhd8ed1ab_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,snouty-viewer.get_reader,Open snouty data,snouty_viewer._reader:napari_get_reader,snouty-viewer.get_reader,,True,2.1,snouty-viewer,0.2.5,,"A plugin to visualize, deskew, and combine Snouty data.","# snouty-viewer [![License MIT](https://img.shields.io/pypi/l/snouty-viewer.svg?color=green)](https://github.com/aelefebv/snouty-viewer/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/snouty-viewer.svg?color=green)](https://pypi.org/project/snouty-viewer) @@ -46146,8 +48515,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/aelefebv/snouty-viewer,Austin E. Y. T. Lefebvre,austin.e.lefebvre@gmail.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['magicgui', 'napari', 'numpy', 'ome-types', 'tifffile', ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/aelefebv/snouty-viewer/issues', 'Documentation, https://github.com/aelefebv/snouty-viewer#README.md', 'Source Code, https://github.com/aelefebv/snouty-viewer', 'User Support, https://github.com/aelefebv/snouty-viewer/issues']",['testing'],False,0.2.1,conda-forge/snouty-viewer/0.2.1,,,,,conda,noarch/snouty-viewer-0.2.1-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['magicgui', 'napari', 'numpy', 'ome-types', 'python >=3.8,<3.11', 'tifffile']",pyhd8ed1ab_0,1681750190501.0,None-any-None,noarch,2023-04-17 16:51:42.097000+00:00,f69b7e214c1aa3355fbbdf221aaf9b5e,2abe86935a589fada7abc1f43892a07aa3aa36e540980fdd4c7ecaf5fcf3ffa8,15651.0,conda-forge/snouty-viewer/0.2.1/noarch/snouty-viewer-0.2.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/snouty-viewer/0.2.1/noarch/snouty-viewer-0.2.1-pyhd8ed1ab_0.conda,conda,0.2.1,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,snouty-viewer.write_single_image,Save deskewed Snouty data,snouty_viewer._writer:write_single_image,snouty-viewer.get_native_view,Convert raw snouty data to its native view,snouty_viewer._widget:native_view,snouty-viewer.batch_deskew_and_save,Batch deskew and save a directory of Snouty-acquired subdirectories,snouty_viewer._widget:batch_deskew_and_save,snouty-viewer.get_native_view,Native View,False,snouty-viewer.batch_deskew_and_save,Batch Deskew & Save,False,snouty-viewer.position_extraction,Position Extraction,False,,,,snouty-viewer.position_extraction,Extract positions from a directory of Snouty-acquired subdirectories,snouty_viewer._widget:position_extraction,snouty-viewer.write_single_image,['image'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['.ome.tif'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -432,spots-in-yeasts,1.2.0,spots in yeasts,A Napari plugin segmenting yeast cells and fluo spots to extract statistics.,Clément H. Benedetti,MIT,https://github.com/MontpellierRessourcesImagerie/spots-in-yeasts,656e36304703fdfc8547a141,['conda'],,https://pypi.org/project/spots-in-yeasts/,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/spots-in-yeasts,http://api.anaconda.org/packages/conda-forge/spots-in-yeasts,http://anaconda.org/conda-forge/spots-in-yeasts,['1.2.0'],1.2.0,1.2.0,['noarch'],3.0,https://github.com/MontpellierRessourcesImagerie/spots-in-yeasts,['pyh9208f05_0'],1.2.0,conda-forge/spots-in-yeasts/1.2.0,1.0,0.0,2023-12-04 20:27:25.295000+00:00,2023-12-04 20:27:28.653000+00:00,conda,noarch/spots-in-yeasts-1.2.0-pyh9208f05_0.conda,0.0,MIT,False,python,"['cellpose', 'magic-class', 'magicgui', 'matplotlib-base', 'napari', 'numpy', 'opencv', 'python >=3.8', 'qtpy', 'scikit-image', 'termcolor', 'tifffile']",noarch,1701721424731.0,None-any-None,pyh9208f05_0,2023-12-04 20:27:25.810000+00:00,862fc37a0ccb2a416aa5ef72bfa0c145,1a81e84628983a51f8c75dd2e219a8797a4fcc077ad191dce82ee62f9cb824f0,35691.0,conda-forge/spots-in-yeasts/1.2.0/noarch/spots-in-yeasts-1.2.0-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/spots-in-yeasts/1.2.0/noarch/spots-in-yeasts-1.2.0-pyh9208f05_0.conda,conda,1.2.0,conda-forge,['main'],public,,0.2.1,spots-in-yeasts.get_reader,"Open data with ""Spots in yeasts""",spots_in_yeasts._reader:napari_get_reader,spots-in-yeasts.get_reader,['*.ysc'],True,2.1,spots-in-yeasts,1.2.0,,A Napari plugin segmenting yeast cells and fluo spots to extract statistics.,"# spots-in-yeasts +",text/markdown,https://github.com/aelefebv/snouty-viewer,Austin E. Y. T. Lefebvre,austin.e.lefebvre@gmail.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['magicgui', 'napari', 'numpy', 'ome-types', 'tifffile', ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/aelefebv/snouty-viewer/issues', 'Documentation, https://github.com/aelefebv/snouty-viewer#README.md', 'Source Code, https://github.com/aelefebv/snouty-viewer', 'User Support, https://github.com/aelefebv/snouty-viewer/issues']",['testing'],False,0.2.1,conda-forge/snouty-viewer/0.2.1,,,,,conda,noarch/snouty-viewer-0.2.1-pyhd8ed1ab_0.conda,0.0,MIT,False,python,"['magicgui', 'napari', 'numpy', 'ome-types', 'python >=3.8,<3.11', 'tifffile']",pyhd8ed1ab_0,1681750190501.0,None-any-None,noarch,2023-04-17 16:51:42.097000+00:00,f69b7e214c1aa3355fbbdf221aaf9b5e,2abe86935a589fada7abc1f43892a07aa3aa36e540980fdd4c7ecaf5fcf3ffa8,15651.0,conda-forge/snouty-viewer/0.2.1/noarch/snouty-viewer-0.2.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/snouty-viewer/0.2.1/noarch/snouty-viewer-0.2.1-pyhd8ed1ab_0.conda,conda,0.2.1,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,snouty-viewer.write_single_image,Save deskewed Snouty data,snouty_viewer._writer:write_single_image,snouty-viewer.get_native_view,Convert raw snouty data to its native view,snouty_viewer._widget:native_view,snouty-viewer.batch_deskew_and_save,Batch deskew and save a directory of Snouty-acquired subdirectories,snouty_viewer._widget:batch_deskew_and_save,snouty-viewer.get_native_view,Native View,False,snouty-viewer.batch_deskew_and_save,Batch Deskew & Save,False,snouty-viewer.position_extraction,Position Extraction,False,,,,snouty-viewer.position_extraction,Extract positions from a directory of Snouty-acquired subdirectories,snouty_viewer._widget:position_extraction,snouty-viewer.write_single_image,['image'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['.ome.tif'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +456,spots-in-yeasts,1.2.0,spots in yeasts,A Napari plugin segmenting yeast cells and fluo spots to extract statistics.,Clément H. Benedetti,MIT,https://github.com/MontpellierRessourcesImagerie/spots-in-yeasts,656e36304703fdfc8547a141,['conda'],,https://pypi.org/project/spots-in-yeasts/,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/spots-in-yeasts,http://api.anaconda.org/packages/conda-forge/spots-in-yeasts,http://anaconda.org/conda-forge/spots-in-yeasts,['1.2.0'],1.2.0,1.2.0,['noarch'],3.0,https://github.com/MontpellierRessourcesImagerie/spots-in-yeasts,['pyh9208f05_0'],1.2.0,conda-forge/spots-in-yeasts/1.2.0,1.0,0.0,2023-12-04 20:27:25.295000+00:00,2023-12-04 20:27:28.653000+00:00,conda,noarch/spots-in-yeasts-1.2.0-pyh9208f05_0.conda,0.0,MIT,False,python,"['cellpose', 'magic-class', 'magicgui', 'matplotlib-base', 'napari', 'numpy', 'opencv', 'python >=3.8', 'qtpy', 'scikit-image', 'termcolor', 'tifffile']",noarch,1701721424731.0,None-any-None,pyh9208f05_0,2023-12-04 20:27:25.810000+00:00,862fc37a0ccb2a416aa5ef72bfa0c145,1a81e84628983a51f8c75dd2e219a8797a4fcc077ad191dce82ee62f9cb824f0,35691.0,conda-forge/spots-in-yeasts/1.2.0/noarch/spots-in-yeasts-1.2.0-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/spots-in-yeasts/1.2.0/noarch/spots-in-yeasts-1.2.0-pyh9208f05_0.conda,conda,1.2.0,conda-forge,['main'],public,,0.2.1,spots-in-yeasts.get_reader,"Open data with ""Spots in yeasts""",spots_in_yeasts._reader:napari_get_reader,spots-in-yeasts.get_reader,['*.ysc'],True,2.1,spots-in-yeasts,1.2.0,,A Napari plugin segmenting yeast cells and fluo spots to extract statistics.,"# spots-in-yeasts [![License: MIT](https://img.shields.io/badge/License-MIT-green.svg)](https://github.com/MontpellierRessourcesImagerie/spots-in-yeasts/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/spots-in-yeasts.svg?color=green)](https://pypi.org/project/spots-in-yeasts) @@ -46291,8 +48660,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/MontpellierRessourcesImagerie/spots-in-yeasts,Clément H. Benedetti,clement.benedetti@mri.cnrs.fr,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'magic-class', 'qtpy', 'opencv-python', 'matplotlib', 'termcolor', 'scikit-image', 'tifffile', 'cellpose', 'napari', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/MontpellierRessourcesImagerie/spots-in-yeasts/issues', 'Documentation, https://github.com/MontpellierRessourcesImagerie/spots-in-yeasts#README.md', 'Source Code, https://github.com/MontpellierRessourcesImagerie/spots-in-yeasts', 'User Support, https://github.com/MontpellierRessourcesImagerie/spots-in-yeasts/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,spots-in-yeasts.spots_in_yeasts,Spots In Yeasts,spots_in_yeasts._widget:SpotsInYeastsDock,,,,,,,spots-in-yeasts.spots_in_yeasts,Spots In Yeasts,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -433,stardist-napari,2024.8.6.1,stardist-napari,Object Detection with Star-convex Shapes,"Uwe Schmidt, Martin Weigert",BSD 3-Clause License,https://github.com/stardist/stardist,62a0a00339552dcb599f7121,['conda'],,https://github.com/stardist/stardist-napari,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/stardist-napari,http://api.anaconda.org/packages/conda-forge/stardist-napari,http://anaconda.org/conda-forge/stardist-napari,"['2022.6.7', '2022.7.5', '2022.12.6', '2024.8.6.1']",2024.8.6.1,2024.8.6.1,['noarch'],11.0,,['pyhd8ed1ab_0'],2022.6.7,conda-forge/stardist-napari/2022.6.7,1.0,0.0,2022-06-08 13:11:27.559000+00:00,2024-08-23 20:16:05.197000+00:00,conda,noarch/stardist-napari-2022.6.7-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui >=0.4.0', 'napari >=0.4.13', 'python >=3.7', 'stardist >=0.8.3', 'tensorflow']",noarch,1654693684172.0,None-any-None,pyhd8ed1ab_0,2022-06-08 13:11:29.221000+00:00,f5b3412fb2167f3a7515b126ccf6e6c4,None,43137.0,conda-forge/stardist-napari/2022.6.7/noarch/stardist-napari-2022.6.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/stardist-napari/2022.6.7/noarch/stardist-napari-2022.6.7-pyhd8ed1ab_0.tar.bz2,conda,2022.6.7,conda-forge,['main'],public,,0.1.0,stardist-napari.widget,Create StarDist widget,stardist_napari:make_dock_widget,,,,2.1,stardist-napari,2024.8.6.1,,Object Detection with Star-convex Shapes,"# StarDist Napari Plugin +",text/markdown,https://github.com/MontpellierRessourcesImagerie/spots-in-yeasts,Clément H. Benedetti,clement.benedetti@mri.cnrs.fr,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'magic-class', 'qtpy', 'opencv-python', 'matplotlib', 'termcolor', 'scikit-image', 'tifffile', 'cellpose', 'napari', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/MontpellierRessourcesImagerie/spots-in-yeasts/issues', 'Documentation, https://github.com/MontpellierRessourcesImagerie/spots-in-yeasts#README.md', 'Source Code, https://github.com/MontpellierRessourcesImagerie/spots-in-yeasts', 'User Support, https://github.com/MontpellierRessourcesImagerie/spots-in-yeasts/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,spots-in-yeasts.spots_in_yeasts,Spots In Yeasts,spots_in_yeasts._widget:SpotsInYeastsDock,,,,,,,spots-in-yeasts.spots_in_yeasts,Spots In Yeasts,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +457,stardist-napari,2024.8.6.1,stardist-napari,Object Detection with Star-convex Shapes,"Uwe Schmidt, Martin Weigert",BSD 3-Clause License,https://github.com/stardist/stardist,62a0a00339552dcb599f7121,['conda'],,https://github.com/stardist/stardist-napari,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/stardist-napari,http://api.anaconda.org/packages/conda-forge/stardist-napari,http://anaconda.org/conda-forge/stardist-napari,"['2022.6.7', '2022.7.5', '2022.12.6', '2024.8.6.1']",2024.8.6.1,2024.8.6.1,['noarch'],11.0,,['pyhd8ed1ab_0'],2022.6.7,conda-forge/stardist-napari/2022.6.7,1.0,0.0,2022-06-08 13:11:27.559000+00:00,2024-08-23 20:16:05.197000+00:00,conda,noarch/stardist-napari-2022.6.7-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui >=0.4.0', 'napari >=0.4.13', 'python >=3.7', 'stardist >=0.8.3', 'tensorflow']",noarch,1654693684172.0,None-any-None,pyhd8ed1ab_0,2022-06-08 13:11:29.221000+00:00,f5b3412fb2167f3a7515b126ccf6e6c4,None,43137.0,conda-forge/stardist-napari/2022.6.7/noarch/stardist-napari-2022.6.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/stardist-napari/2022.6.7/noarch/stardist-napari-2022.6.7-pyhd8ed1ab_0.tar.bz2,conda,2022.6.7,conda-forge,['main'],public,,0.1.0,stardist-napari.widget,Create StarDist widget,stardist_napari:make_dock_widget,,,,2.1,stardist-napari,2024.8.6.1,,Object Detection with Star-convex Shapes,"# StarDist Napari Plugin [![PyPI version](https://img.shields.io/pypi/v/stardist-napari.svg)](https://pypi.org/project/stardist-napari) [![Anaconda-Server Badge](https://anaconda.org/conda-forge/stardist-napari/badges/version.svg)](https://anaconda.org/conda-forge/stardist-napari) @@ -46407,8 +48776,8 @@ The plugin does perform input validation, i.e. it will disable the `Run` button A demonstration of an earlier version of the plugin is shown in [this video](https://www.youtube.com/watch?v=Km1_TnUQ4FM&list=PLilvrWT8aLuZCaOkjucLjvDu2YRtCS-JT&index=5). Many of the parameters are identical to those of our [StarDist ImageJ/Fiji plugin](https://github.com/stardist/stardist-imagej), which are documented [here](https://imagej.net/plugins/stardist#usage). -",text/markdown,https://github.com/stardist/stardist,"Uwe Schmidt, Martin Weigert","research@uweschmidt.org, martin.weigert@epfl.ch",BSD 3-Clause License,"['Development Status :: 4 - Beta', 'Intended Audience :: Science/Research', 'Topic :: Scientific/Engineering', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Framework :: napari']","['stardist>=0.8.3', 'napari>=0.4.13', 'magicgui>=0.4.0', 'tensorflow; platform_system != ""Darwin"" or platform_machine != ""arm64""', 'tensorflow-macos; platform_system == ""Darwin"" and platform_machine == ""arm64""', 'tensorflow-metal; platform_system == ""Darwin"" and platform_machine == ""arm64""', 'pytest; extra == ""test""', 'pytest-qt; extra == ""test""', 'napari[pyqt]>=0.4.13; extra == ""test""']",>=3.8,"['Source Code, https://github.com/stardist/stardist-napari', 'Documentation, https://github.com/stardist/stardist-napari', 'Bug Tracker, https://github.com/stardist/stardist-napari/issues', 'User Support, https://forum.image.sc/tag/stardist', 'Twitter, https://twitter.com/martweig']",['test'],False,2022.7.5,conda-forge/stardist-napari/2022.7.5,2022.12.6,conda-forge/stardist-napari/2022.12.6,2024.8.6.1,conda-forge/stardist-napari/2024.8.6.1,conda,noarch/stardist-napari-2022.7.5-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui >=0.4.0', 'napari >=0.4.13', 'python >=3.7', 'stardist >=0.8.3', 'tensorflow']",pyhd8ed1ab_0,1657098580891.0,None-any-None,noarch,2022-07-06 09:12:40.239000+00:00,3cac454f64faab2ada4212f6d3337340,None,46752.0,conda-forge/stardist-napari/2022.7.5/noarch/stardist-napari-2022.7.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/stardist-napari/2022.7.5/noarch/stardist-napari-2022.7.5-pyhd8ed1ab_0.tar.bz2,conda,2022.7.5,conda-forge,['main'],conda,noarch/stardist-napari-2022.12.6-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui >=0.4.0', 'napari >=0.4.13', 'python >=3.7', 'stardist >=0.8.3', 'tensorflow']",noarch,1670366281298.0,None-any-None,pyhd8ed1ab_0,2022-12-06 22:41:00.255000+00:00,0ac4eb590a2fea766968f35229ca9d6c,a91d80a548e855b2dd6dd6c84e36e2a4b477adad5ab1c34ef9101495f5bf1ec6,46219.0,conda-forge/stardist-napari/2022.12.6/noarch/stardist-napari-2022.12.6-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/stardist-napari/2022.12.6/noarch/stardist-napari-2022.12.6-pyhd8ed1ab_0.conda,conda,2022.12.6,conda-forge,['main'],conda,noarch/stardist-napari-2024.8.6.1-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['magicgui >=0.4.0', 'napari >=0.4.13', 'python >=3.7', 'stardist >=0.8.3', 'tensorflow']",BSD-3-Clause,python,1724443931921.0,2024-08-23 20:16:02.040000+00:00,1b2f9699104552529f6924db2c51b40d,545e8e4b30bcad5e46156f4cb2a8a121a4a86d591ddfbe0d26bda07aaeb8175b,46876.0,conda-forge/stardist-napari/2024.8.6.1/noarch/stardist-napari-2024.8.6.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/stardist-napari/2024.8.6.1/noarch/stardist-napari-2024.8.6.1-pyhd8ed1ab_0.conda,conda,2024.8.6.1,conda-forge,['main'],,stardist-napari.data.nuclei_2d,Nuclei (2D) sample,stardist_napari._sample_data:_test_image_nuclei_2d,stardist-napari.data.he_2d,H&E Nuclei (2D RGB) sample,stardist_napari._sample_data:_test_image_he_2d,stardist-napari.data.nuclei_3d,Nuclei (3D) sample,stardist_napari._sample_data:_test_image_nuclei_3d,stardist-napari.widget,StarDist,False,,,,,,,,,,,,,,,,,,,,stardist-napari.data.nuclei_2d,nuclei_2d,Nuclei (2D),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,stardist-napari.data.nuclei_3d,nuclei_3d,Nuclei (3D),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,stardist-napari.data.he_2d,he_2d,H&E Nuclei (2D RGB) -434,surforama,0.0.9,Surforama,a tool for using surfaces to explore volumetric data in napari,Kyle Harrington,MIT,https://github.com/cellcanvas/surforama,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,hidden,,0.2.1,surforama.make_widget,Make Surforama,surforama:QtSurforama,surforama.mesh_reader,['*.obj'],False,2.1,surforama,0.0.9,,a tool for using surfaces to explore volumetric data in napari,"# surforama +",text/markdown,https://github.com/stardist/stardist,"Uwe Schmidt, Martin Weigert","research@uweschmidt.org, martin.weigert@epfl.ch",BSD 3-Clause License,"['Development Status :: 4 - Beta', 'Intended Audience :: Science/Research', 'Topic :: Scientific/Engineering', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Framework :: napari']","['stardist>=0.8.3', 'napari>=0.4.13', 'magicgui>=0.4.0', 'tensorflow; platform_system != ""Darwin"" or platform_machine != ""arm64""', 'tensorflow-macos; platform_system == ""Darwin"" and platform_machine == ""arm64""', 'tensorflow-metal; platform_system == ""Darwin"" and platform_machine == ""arm64""', 'pytest; extra == ""test""', 'pytest-qt; extra == ""test""', 'napari[pyqt]>=0.4.13; extra == ""test""']",>=3.8,"['Source Code, https://github.com/stardist/stardist-napari', 'Documentation, https://github.com/stardist/stardist-napari', 'Bug Tracker, https://github.com/stardist/stardist-napari/issues', 'User Support, https://forum.image.sc/tag/stardist', 'Twitter, https://twitter.com/martweig']",['test'],False,2022.7.5,conda-forge/stardist-napari/2022.7.5,2022.12.6,conda-forge/stardist-napari/2022.12.6,2024.8.6.1,conda-forge/stardist-napari/2024.8.6.1,conda,noarch/stardist-napari-2022.7.5-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui >=0.4.0', 'napari >=0.4.13', 'python >=3.7', 'stardist >=0.8.3', 'tensorflow']",pyhd8ed1ab_0,1657098580891.0,None-any-None,noarch,2022-07-06 09:12:40.239000+00:00,3cac454f64faab2ada4212f6d3337340,None,46752.0,conda-forge/stardist-napari/2022.7.5/noarch/stardist-napari-2022.7.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/stardist-napari/2022.7.5/noarch/stardist-napari-2022.7.5-pyhd8ed1ab_0.tar.bz2,conda,2022.7.5,conda-forge,['main'],conda,noarch/stardist-napari-2022.12.6-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui >=0.4.0', 'napari >=0.4.13', 'python >=3.7', 'stardist >=0.8.3', 'tensorflow']",noarch,1670366281298.0,None-any-None,pyhd8ed1ab_0,2022-12-06 22:41:00.255000+00:00,0ac4eb590a2fea766968f35229ca9d6c,a91d80a548e855b2dd6dd6c84e36e2a4b477adad5ab1c34ef9101495f5bf1ec6,46219.0,conda-forge/stardist-napari/2022.12.6/noarch/stardist-napari-2022.12.6-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/stardist-napari/2022.12.6/noarch/stardist-napari-2022.12.6-pyhd8ed1ab_0.conda,conda,2022.12.6,conda-forge,['main'],conda,noarch/stardist-napari-2024.8.6.1-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['magicgui >=0.4.0', 'napari >=0.4.13', 'python >=3.7', 'stardist >=0.8.3', 'tensorflow']",BSD-3-Clause,python,1724443931921.0,2024-08-23 20:16:02.040000+00:00,1b2f9699104552529f6924db2c51b40d,545e8e4b30bcad5e46156f4cb2a8a121a4a86d591ddfbe0d26bda07aaeb8175b,46876.0,conda-forge/stardist-napari/2024.8.6.1/noarch/stardist-napari-2024.8.6.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/stardist-napari/2024.8.6.1/noarch/stardist-napari-2024.8.6.1-pyhd8ed1ab_0.conda,conda,2024.8.6.1,conda-forge,['main'],,stardist-napari.data.nuclei_2d,Nuclei (2D) sample,stardist_napari._sample_data:_test_image_nuclei_2d,stardist-napari.data.he_2d,H&E Nuclei (2D RGB) sample,stardist_napari._sample_data:_test_image_he_2d,stardist-napari.data.nuclei_3d,Nuclei (3D) sample,stardist_napari._sample_data:_test_image_nuclei_3d,stardist-napari.widget,StarDist,False,,,,,,,,,,,,,,,,,,,,stardist-napari.data.nuclei_2d,nuclei_2d,Nuclei (2D),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,stardist-napari.data.nuclei_3d,nuclei_3d,Nuclei (3D),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,stardist-napari.data.he_2d,he_2d,H&E Nuclei (2D RGB) +458,surforama,0.0.9,Surforama,a tool for using surfaces to explore volumetric data in napari,Kyle Harrington,MIT,https://github.com/cellcanvas/surforama,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,hidden,,0.2.1,surforama.make_widget,Make Surforama,surforama:QtSurforama,surforama.mesh_reader,['*.obj'],False,2.1,surforama,0.0.9,,a tool for using surfaces to explore volumetric data in napari,"# surforama a napari-based tool for using surfaces to explore volumetric data in napari inspired by [membranorama](https://github.com/dtegunov/membranorama) @@ -46465,8 +48834,8 @@ We use pre-commit to keep the code tidy. Install the pre-commit hooks to activat ```bash pre-commit install ``` -",text/markdown,https://github.com/cellcanvas/surforama,Kyle Harrington,surforama@kyleharrington.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['magicgui', 'mrcfile', 'numpy', 'pooch', 'qtpy', 'pyacvd', 'pyvista', 'rich', 'scikit-image', 'starfile', 'trimesh', 'typer', ""napari ; extra == 'dev'"", ""pyqt5 ; extra == 'dev'"", ""pytest ; extra == 'dev'"", ""pytest-cov ; extra == 'dev'"", ""pytest-qt ; extra == 'dev'"", ""tox ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""napari[all] ; extra == 'napari'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/cellcanvas/surforama/issues', 'Documentation, https://github.com/cellcanvas/surforama#README.md', 'Source Code, https://github.com/cellcanvas/surforama', 'User Support, https://github.com/cellcanvas/surforama/issues']","['dev', 'napari', 'testing']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Visualization']",surforama.thylakoid,Thylakoid membrane,surforama.data._datasets:_thylakoid_membrane_sample_data_plugin,surforama.covid,Covid virion membrane,surforama.data._datasets:_covid_membrane_sample_data_plugin,surforama.mesh_reader,Mesh reader,surforama.io._reader_plugin:mesh_reader_plugin,surforama.make_widget,Surforama,False,,,,,,,,,,surforama.star_reader,star reader,surforama.io._reader_plugin:star_reader_plugin,,,,,,,,surforama.thylakoid,thylakoid,thylakoid membrane,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,surforama.covid,covid,covid virion membrane,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -435,test-detect-spots,0.0.1,napari Detect Spots,A dummy plugin to learn how to create plugins,Kevin Lai,BSD-3-Clause,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,test-detect-spots.make_func_widget,Make example function widget,napari_detect_spots._widget:detect_spots,,,,2.1,test-detect-spots,0.0.1,,A dummy plugin to learn how to create plugins,"# test-detect-spots +",text/markdown,https://github.com/cellcanvas/surforama,Kyle Harrington,surforama@kyleharrington.com,MIT,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['magicgui', 'mrcfile', 'numpy', 'pooch', 'qtpy', 'pyacvd', 'pyvista', 'rich', 'scikit-image', 'starfile', 'trimesh', 'typer', ""napari ; extra == 'dev'"", ""pyqt5 ; extra == 'dev'"", ""pytest ; extra == 'dev'"", ""pytest-cov ; extra == 'dev'"", ""pytest-qt ; extra == 'dev'"", ""tox ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""napari[all] ; extra == 'napari'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/cellcanvas/surforama/issues', 'Documentation, https://github.com/cellcanvas/surforama#README.md', 'Source Code, https://github.com/cellcanvas/surforama', 'User Support, https://github.com/cellcanvas/surforama/issues']","['dev', 'napari', 'testing']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"['Annotation', 'Visualization']",surforama.thylakoid,Thylakoid membrane,surforama.data._datasets:_thylakoid_membrane_sample_data_plugin,surforama.covid,Covid virion membrane,surforama.data._datasets:_covid_membrane_sample_data_plugin,surforama.mesh_reader,Mesh reader,surforama.io._reader_plugin:mesh_reader_plugin,surforama.make_widget,Surforama,False,,,,,,,,,,surforama.star_reader,star reader,surforama.io._reader_plugin:star_reader_plugin,,,,,,,,surforama.thylakoid,thylakoid,thylakoid membrane,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,surforama.covid,covid,covid virion membrane,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +459,test-detect-spots,0.0.1,napari Detect Spots,A dummy plugin to learn how to create plugins,Kevin Lai,BSD-3-Clause,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,test-detect-spots.make_func_widget,Make example function widget,napari_detect_spots._widget:detect_spots,,,,2.1,test-detect-spots,0.0.1,,A dummy plugin to learn how to create plugins,"# test-detect-spots [![License BSD-3](https://img.shields.io/pypi/l/test-detect-spots.svg?color=green)](https://github.com/klai95/test-detect-spots/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/test-detect-spots.svg?color=green)](https://pypi.org/project/test-detect-spots) @@ -46527,8 +48896,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,,Kevin Lai,klai@chanzuckerberg.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,test-detect-spots.make_func_widget,Detect Spots Widget,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -436,the-segmentation-game,0.2.0,the-segmentation-game,Gamified image segmentation quality estimation,"Robert Haase, Martin Schätz",BSD-3-Clause,https://github.com/haesleinhuepf/the-segmentation-game,62ab5bd50b3c44567d33e9c6,['conda'],,https://github.com/haesleinhuepf/the-segmentation-game,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/the-segmentation-game,http://api.anaconda.org/packages/conda-forge/the-segmentation-game,http://anaconda.org/conda-forge/the-segmentation-game,"['0.1.0', '0.2.0']",0.2.0,0.2.0,['noarch'],4.0,,['pyhd8ed1ab_0'],0.1.0,conda-forge/the-segmentation-game/0.1.0,1.0,0.0,2022-06-16 16:35:31.202000+00:00,2023-06-18 08:41:49.021000+00:00,conda,noarch/the-segmentation-game-0.1.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops', 'napari-tools-menu', 'numpy', 'python >=3.7', 'scikit-learn']",noarch,1655397157232.0,None-any-None,pyhd8ed1ab_0,2022-06-16 16:35:31.491000+00:00,a232cf11e2756b22da72fcd179183310,None,12961.0,conda-forge/the-segmentation-game/0.1.0/noarch/the-segmentation-game-0.1.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/the-segmentation-game/0.1.0/noarch/the-segmentation-game-0.1.0-pyhd8ed1ab_0.tar.bz2,conda,0.1.0,conda-forge,['main'],public,,0.2.1,the-segmentation-game.TheSegmentationGameWidget,TheSegmentationGameWidget,the_segmentation_game._dock_widget:TheSegmentationGameWidget,,,,2.1,the-segmentation-game,0.2.0,,Gamified image segmentation quality estimation,"# The segmentation game - for napari +",text/markdown,,Kevin Lai,klai@chanzuckerberg.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,,['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,test-detect-spots.make_func_widget,Detect Spots Widget,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +460,the-segmentation-game,0.2.0,the-segmentation-game,Gamified image segmentation quality estimation,"Robert Haase, Martin Schätz",BSD-3-Clause,https://github.com/haesleinhuepf/the-segmentation-game,62ab5bd50b3c44567d33e9c6,['conda'],,https://github.com/haesleinhuepf/the-segmentation-game,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/the-segmentation-game,http://api.anaconda.org/packages/conda-forge/the-segmentation-game,http://anaconda.org/conda-forge/the-segmentation-game,"['0.1.0', '0.2.0']",0.2.0,0.2.0,['noarch'],4.0,,['pyhd8ed1ab_0'],0.1.0,conda-forge/the-segmentation-game/0.1.0,1.0,0.0,2022-06-16 16:35:31.202000+00:00,2023-06-18 08:41:49.021000+00:00,conda,noarch/the-segmentation-game-0.1.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops', 'napari-tools-menu', 'numpy', 'python >=3.7', 'scikit-learn']",noarch,1655397157232.0,None-any-None,pyhd8ed1ab_0,2022-06-16 16:35:31.491000+00:00,a232cf11e2756b22da72fcd179183310,None,12961.0,conda-forge/the-segmentation-game/0.1.0/noarch/the-segmentation-game-0.1.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/the-segmentation-game/0.1.0/noarch/the-segmentation-game-0.1.0-pyhd8ed1ab_0.tar.bz2,conda,0.1.0,conda-forge,['main'],public,,0.2.1,the-segmentation-game.TheSegmentationGameWidget,TheSegmentationGameWidget,the_segmentation_game._dock_widget:TheSegmentationGameWidget,,,,2.1,the-segmentation-game,0.2.0,,Gamified image segmentation quality estimation,"# The segmentation game - for napari [![License](https://img.shields.io/pypi/l/the-segmentation-game.svg?color=green)](https://github.com/haesleinhuepf/the-segmentation-game/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/the-segmentation-game.svg?color=green)](https://pypi.org/project/the-segmentation-game) @@ -46660,8 +49029,8 @@ If you encounter any problems, please open a thread on [image.sc](https://image. [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/haesleinhuepf/the-segmentation-game,"Robert Haase, Martin Schätz",robert.haase@tu-dresden.de,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari-tools-menu', 'napari-skimage-regionprops', 'scikit-learn']",>=3.7,"['Bug Tracker, https://github.com/haesleinhuepf/the-segmentation-game/issues', 'Documentation, https://github.com/haesleinhuepf/the-segmentation-game#README.md', 'Source Code, https://github.com/haesleinhuepf/the-segmentation-game', 'User Support, https://github.com/haesleinhuepf/the-segmentation-game/issues']",,True,0.2.0,conda-forge/the-segmentation-game/0.2.0,,,,,conda,noarch/the-segmentation-game-0.2.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops', 'napari-tools-menu', 'numpy', 'python >=3.7', 'scikit-learn']",pyhd8ed1ab_0,1664775396011.0,None-any-None,noarch,2022-10-03 05:38:57.624000+00:00,f230cd2f7499d70024e3c796b218327b,None,15693.0,conda-forge/the-segmentation-game/0.2.0/noarch/the-segmentation-game-0.2.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/the-segmentation-game/0.2.0/noarch/the-segmentation-game-0.2.0-pyhd8ed1ab_0.tar.bz2,conda,0.2.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,the-segmentation-game.TheSegmentationGameWidget,TheSegmentationGameWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -437,tootapari,0.0.1,Tootapari,A plugin to send Mastodon toots from napari,Kyle Harrington,BSD-3-Clause,https://github.com/kephale/tootapari,64ca28ee8e1a13918bc7519c,['conda'],,https://github.com/kephale/tootapari,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/tootapari,http://api.anaconda.org/packages/conda-forge/tootapari,http://anaconda.org/conda-forge/tootapari,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,,['pyh9208f05_0'],0.0.1,conda-forge/tootapari/0.0.1,1.0,0.0,2023-08-02 09:59:05.070000+00:00,2023-08-02 09:59:10.771000+00:00,conda,noarch/tootapari-0.0.1-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['appdirs', 'mastodon.py', 'napari', 'numpy', 'python >=3.8', 'python-dotenv', 'qtpy']",noarch,1690970228854.0,None-any-None,pyh9208f05_0,2023-08-02 09:59:08.640000+00:00,e9c73c2705fd06e4456fe71e1e9400b3,72f09cfbb544c72143f7625f1d44718cbe623806fd873fbbe497f3bdd255fe92,11452.0,conda-forge/tootapari/0.0.1/noarch/tootapari-0.0.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/tootapari/0.0.1/noarch/tootapari-0.0.1-pyh9208f05_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,tootapari.make_qwidget,Tootapari!,tootapari.widget:TootapariWidget,,,,2.1,tootapari,0.0.1,,A plugin to send Mastodon toots from napari,"# tootapari +",text/markdown,https://github.com/haesleinhuepf/the-segmentation-game,"Robert Haase, Martin Schätz",robert.haase@tu-dresden.de,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari-tools-menu', 'napari-skimage-regionprops', 'scikit-learn']",>=3.7,"['Bug Tracker, https://github.com/haesleinhuepf/the-segmentation-game/issues', 'Documentation, https://github.com/haesleinhuepf/the-segmentation-game#README.md', 'Source Code, https://github.com/haesleinhuepf/the-segmentation-game', 'User Support, https://github.com/haesleinhuepf/the-segmentation-game/issues']",,True,0.2.0,conda-forge/the-segmentation-game/0.2.0,,,,,conda,noarch/the-segmentation-game-0.2.0-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['napari-plugin-engine >=0.1.4', 'napari-skimage-regionprops', 'napari-tools-menu', 'numpy', 'python >=3.7', 'scikit-learn']",pyhd8ed1ab_0,1664775396011.0,None-any-None,noarch,2022-10-03 05:38:57.624000+00:00,f230cd2f7499d70024e3c796b218327b,None,15693.0,conda-forge/the-segmentation-game/0.2.0/noarch/the-segmentation-game-0.2.0-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/the-segmentation-game/0.2.0/noarch/the-segmentation-game-0.2.0-pyhd8ed1ab_0.tar.bz2,conda,0.2.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,the-segmentation-game.TheSegmentationGameWidget,TheSegmentationGameWidget,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +461,tootapari,0.0.1,Tootapari,A plugin to send Mastodon toots from napari,Kyle Harrington,BSD-3-Clause,https://github.com/kephale/tootapari,64ca28ee8e1a13918bc7519c,['conda'],,https://github.com/kephale/tootapari,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/tootapari,http://api.anaconda.org/packages/conda-forge/tootapari,http://anaconda.org/conda-forge/tootapari,['0.0.1'],0.0.1,0.0.1,['noarch'],3.0,,['pyh9208f05_0'],0.0.1,conda-forge/tootapari/0.0.1,1.0,0.0,2023-08-02 09:59:05.070000+00:00,2023-08-02 09:59:10.771000+00:00,conda,noarch/tootapari-0.0.1-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['appdirs', 'mastodon.py', 'napari', 'numpy', 'python >=3.8', 'python-dotenv', 'qtpy']",noarch,1690970228854.0,None-any-None,pyh9208f05_0,2023-08-02 09:59:08.640000+00:00,e9c73c2705fd06e4456fe71e1e9400b3,72f09cfbb544c72143f7625f1d44718cbe623806fd873fbbe497f3bdd255fe92,11452.0,conda-forge/tootapari/0.0.1/noarch/tootapari-0.0.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/tootapari/0.0.1/noarch/tootapari-0.0.1-pyh9208f05_0.conda,conda,0.0.1,conda-forge,['main'],public,,0.2.1,tootapari.make_qwidget,Tootapari!,tootapari.widget:TootapariWidget,,,,2.1,tootapari,0.0.1,,A plugin to send Mastodon toots from napari,"# tootapari [![License BSD-3](https://img.shields.io/pypi/l/tootapari.svg?color=green)](https://github.com/kephale/tootapari/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/tootapari.svg?color=green)](https://pypi.org/project/tootapari) @@ -46735,8 +49104,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/kephale/tootapari,Kyle Harrington,czi@kyleharrington.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'python-dotenv', 'Mastodon.py', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/kephale/tootapari/issues', 'Documentation, https://github.com/kephale/tootapari#README.md', 'Source Code, https://github.com/kephale/tootapari', 'User Support, https://github.com/kephale/tootapari/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,tootapari.make_qwidget,Tootapari!,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -438,tracking-challenge-demo,0.0.8,Tracking Challenge Solver,"A demo plugin to load, segment and save tracking challenge data.",Draga Doncila,BSD-3-Clause,https://github.com/DragaDoncila/tracking-challenge-demo,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,hidden,,0.2.1,tracking-challenge-demo.get_reader,Open Ground Truth tracking challenge segmentation data,tracking_challenge_demo._reader:napari_get_reader,tracking-challenge-demo.get_reader,,True,2.1,tracking-challenge-demo,0.0.8,,"A demo plugin to load, segment and save tracking challenge data.","# tracking-challenge-demo +",text/markdown,https://github.com/kephale/tootapari,Kyle Harrington,czi@kyleharrington.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'python-dotenv', 'Mastodon.py', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/kephale/tootapari/issues', 'Documentation, https://github.com/kephale/tootapari#README.md', 'Source Code, https://github.com/kephale/tootapari', 'User Support, https://github.com/kephale/tootapari/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,tootapari.make_qwidget,Tootapari!,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +462,tracking-challenge-demo,0.0.8,Tracking Challenge Solver,"A demo plugin to load, segment and save tracking challenge data.",Draga Doncila,BSD-3-Clause,https://github.com/DragaDoncila/tracking-challenge-demo,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,hidden,,0.2.1,tracking-challenge-demo.get_reader,Open Ground Truth tracking challenge segmentation data,tracking_challenge_demo._reader:napari_get_reader,tracking-challenge-demo.get_reader,,True,2.1,tracking-challenge-demo,0.0.8,,"A demo plugin to load, segment and save tracking challenge data.","# tracking-challenge-demo [![License](https://img.shields.io/pypi/l/tracking-challenge-demo.svg?color=green)](https://github.com/DragaDoncila/tracking-challenge-demo/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/tracking-challenge-demo.svg?color=green)](https://pypi.org/project/tracking-challenge-demo) @@ -46803,8 +49172,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/DragaDoncila/tracking-challenge-demo,Draga Doncila,ddoncila@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['dask[array]', 'imagecodecs', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'scikit-image', 'tifffile', ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/DragaDoncila/tracking-challenge-demo/issues', 'Documentation, https://github.com/DragaDoncila/tracking-challenge-demo#README.md', 'Source Code, https://github.com/DragaDoncila/tracking-challenge-demo', 'User Support, https://github.com/DragaDoncila/tracking-challenge-demo/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,tracking-challenge-demo.write_single_image,Save labels data with Tracking Challenge Solver,tracking_challenge_demo._writer:write_single_image,tracking-challenge-demo.make_qwidget,Make example QWidget,tracking_challenge_demo._widget:SegmentationDiffHighlight,tracking-challenge-demo.make_magic_widget,Make segmentation by threshold widget,tracking_challenge_demo._widget:segment_by_threshold,tracking-challenge-demo.make_qwidget,Example QWidget,False,tracking-challenge-demo.make_magic_widget,Segment by Threshold,False,,,,,,,,,,tracking-challenge-demo.write_single_image,['labels'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['.zip'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -439,tracktour,0.0.3rc1,Tracktour,Network flow based tracker with guided error correction,,BSD 3-Clause License,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.0,tracktour.merge_explorer,Merge Explorer...,tracktour._napari._merge_explorer:MergeExplorer,,,,2.3,tracktour,0.0.3rc1,,Network flow based tracker with guided error correction,"# tracktour +",text/markdown,https://github.com/DragaDoncila/tracking-challenge-demo,Draga Doncila,ddoncila@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['dask[array]', 'imagecodecs', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'scikit-image', 'tifffile', ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/DragaDoncila/tracking-challenge-demo/issues', 'Documentation, https://github.com/DragaDoncila/tracking-challenge-demo#README.md', 'Source Code, https://github.com/DragaDoncila/tracking-challenge-demo', 'User Support, https://github.com/DragaDoncila/tracking-challenge-demo/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,tracking-challenge-demo.write_single_image,Save labels data with Tracking Challenge Solver,tracking_challenge_demo._writer:write_single_image,tracking-challenge-demo.make_qwidget,Make example QWidget,tracking_challenge_demo._widget:SegmentationDiffHighlight,tracking-challenge-demo.make_magic_widget,Make segmentation by threshold widget,tracking_challenge_demo._widget:segment_by_threshold,tracking-challenge-demo.make_qwidget,Example QWidget,False,tracking-challenge-demo.make_magic_widget,Segment by Threshold,False,,,,,,,,,,tracking-challenge-demo.write_single_image,['labels'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['.zip'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +463,tracktour,0.0.3rc1,Tracktour,Network flow based tracker with guided error correction,,BSD 3-Clause License,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.0,tracktour.merge_explorer,Merge Explorer...,tracktour._napari._merge_explorer:MergeExplorer,,,,2.3,tracktour,0.0.3rc1,,Network flow based tracker with guided error correction,"# tracktour [![License](https://img.shields.io/pypi/l/tracktour.svg?color=green)](https://github.com/DragaDoncila/tracktour/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/tracktour.svg?color=green)](https://pypi.org/project/tracktour) @@ -46885,8 +49254,8 @@ $ tracktour ctc /path/to/seg/ /path/to/save/ -k 8 ## Support Please feel free to open issues with feature requests, bug reports, questions on usage, etc. -",text/markdown,,,Draga Doncila Pop ,BSD 3-Clause License,"['Framework :: napari', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Topic :: Scientific/Engineering :: Visualization']","['gurobipy', 'imagecodecs', 'networkx', 'numpy', 'pandas', 'pydantic', 'scikit-image', 'scipy', 'tifffile', 'tqdm', 'typer', ""pre-commit; extra == 'dev'"", ""arboretum; extra == 'napari'"", ""napari; extra == 'napari'"", ""napari-graph; extra == 'napari'"", ""pytest>=6.0; extra == 'test'""]",>=3.8,"['homepage, https://github.com/DragaDoncila/tracktour', 'repository, https://github.com/DragaDoncila/tracktour']","['dev', 'napari', 'test']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,tracktour.track_solver,Track Solver...,tracktour._napari._solver:TrackingSolver,tracktour.track_editor,Track Editor...,tracktour._napari._track_editor:TrackEditor,,,,tracktour.merge_explorer,Merge Explorer,False,tracktour.track_solver,Track Solver,False,tracktour.track_editor,Track Editor,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -440,vessel-express-napari,0.0.9,vessel-express-napari,A simple plugin for 3D vessel segmentation,Lennart Kowitz,BSD-3-Clause,https://github.com/MMV-Lab/vessel-express-napari,62ff66d2ba6dc390a17226f6,['conda'],,https://github.com/MMV-Lab/vessel-express-napari,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/vessel-express-napari,http://api.anaconda.org/packages/conda-forge/vessel-express-napari,http://anaconda.org/conda-forge/vessel-express-napari,"['0.0.8', '0.0.9']",0.0.8,0.0.9,['noarch'],4.0,,['pyhd8ed1ab_0'],0.0.8,conda-forge/vessel-express-napari/0.0.8,1.0,0.0,2022-08-19 10:32:49.085000+00:00,2023-07-26 02:36:26.724000+00:00,conda,noarch/vessel-express-napari-0.0.8-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['aicssegmentation', 'itk', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'qtpy', 'scikit-image', 'tifffile']",noarch,1660904976631.0,None-any-None,pyhd8ed1ab_0,2022-08-19 10:32:49.305000+00:00,f1fb14f82c0a293481f22221432413b0,None,19231.0,conda-forge/vessel-express-napari/0.0.8/noarch/vessel-express-napari-0.0.8-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/vessel-express-napari/0.0.8/noarch/vessel-express-napari-0.0.8-pyhd8ed1ab_0.tar.bz2,conda,0.0.8,conda-forge,['main'],public,,0.2.1,vessel-express-napari.ParameterTuning,ParameterTuning,vessel_express._dock_widget:ParameterTuning,vessel-express-napari.napari_get_reader,['*'],True,2.1,vessel-express-napari,0.0.9,,A simple plugin for 3D vessel segmentation,"# vessel-express-napari +",text/markdown,,,Draga Doncila Pop ,BSD 3-Clause License,"['Framework :: napari', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Topic :: Scientific/Engineering :: Visualization']","['gurobipy', 'imagecodecs', 'networkx', 'numpy', 'pandas', 'pydantic', 'scikit-image', 'scipy', 'tifffile', 'tqdm', 'typer', ""pre-commit; extra == 'dev'"", ""arboretum; extra == 'napari'"", ""napari; extra == 'napari'"", ""napari-graph; extra == 'napari'"", ""pytest>=6.0; extra == 'test'""]",>=3.8,"['homepage, https://github.com/DragaDoncila/tracktour', 'repository, https://github.com/DragaDoncila/tracktour']","['dev', 'napari', 'test']",False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,tracktour.track_solver,Track Solver...,tracktour._napari._solver:TrackingSolver,tracktour.track_editor,Track Editor...,tracktour._napari._track_editor:TrackEditor,,,,tracktour.merge_explorer,Merge Explorer,False,tracktour.track_solver,Track Solver,False,tracktour.track_editor,Track Editor,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +464,vessel-express-napari,0.0.9,vessel-express-napari,A simple plugin for 3D vessel segmentation,Lennart Kowitz,BSD-3-Clause,https://github.com/MMV-Lab/vessel-express-napari,62ff66d2ba6dc390a17226f6,['conda'],,https://github.com/MMV-Lab/vessel-express-napari,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/vessel-express-napari,http://api.anaconda.org/packages/conda-forge/vessel-express-napari,http://anaconda.org/conda-forge/vessel-express-napari,"['0.0.8', '0.0.9']",0.0.8,0.0.9,['noarch'],4.0,,['pyhd8ed1ab_0'],0.0.8,conda-forge/vessel-express-napari/0.0.8,1.0,0.0,2022-08-19 10:32:49.085000+00:00,2023-07-26 02:36:26.724000+00:00,conda,noarch/vessel-express-napari-0.0.8-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['aicssegmentation', 'itk', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'qtpy', 'scikit-image', 'tifffile']",noarch,1660904976631.0,None-any-None,pyhd8ed1ab_0,2022-08-19 10:32:49.305000+00:00,f1fb14f82c0a293481f22221432413b0,None,19231.0,conda-forge/vessel-express-napari/0.0.8/noarch/vessel-express-napari-0.0.8-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/vessel-express-napari/0.0.8/noarch/vessel-express-napari-0.0.8-pyhd8ed1ab_0.tar.bz2,conda,0.0.8,conda-forge,['main'],public,,0.2.1,vessel-express-napari.ParameterTuning,ParameterTuning,vessel_express._dock_widget:ParameterTuning,vessel-express-napari.napari_get_reader,['*'],True,2.1,vessel-express-napari,0.0.9,,A simple plugin for 3D vessel segmentation,"# vessel-express-napari [![License](https://img.shields.io/pypi/l/vessel-express-napari.svg?color=green)](https://github.com/MMV-Lab/vessel-express-napari/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/vessel-express-napari.svg?color=green)](https://pypi.org/project/vessel-express-napari/) @@ -46954,8 +49323,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ [quick start guide]: https://github.com/MMV-Lab/vessel-express-napari/blob/main/quick_start.md -",text/markdown,https://github.com/MMV-Lab/vessel-express-napari,Lennart Kowitz,lennart.kowitz@isas.de,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'itk', 'scikit-image', 'aicssegmentation']",>=3.7,"['Bug Tracker, https://github.com/MMV-Lab/vessel-express-napari/issues', 'Documentation, https://github.com/MMV-Lab/vessel-express-napari#README.md', 'Source Code, https://github.com/MMV-Lab/vessel-express-napari', 'User Support, https://github.com/MMV-Lab/vessel-express-napari/issues']",,True,0.0.9,conda-forge/vessel-express-napari/0.0.9,,,,,conda,noarch/vessel-express-napari-0.0.9-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['aicssegmentation', 'itk', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'qtpy', 'scikit-image', 'tifffile']",pyhd8ed1ab_0,1690338809070.0,None-any-None,noarch,2023-07-26 02:36:24.949000+00:00,6196c3fa44127a714467698406b72895,a2095f7fbd273da93e5520fb937027cb6f0644bb6bb32d12abbbc8337af16526,21505.0,conda-forge/vessel-express-napari/0.0.9/noarch/vessel-express-napari-0.0.9-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/vessel-express-napari/0.0.9/noarch/vessel-express-napari-0.0.9-pyhd8ed1ab_0.conda,conda,0.0.9,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,vessel-express-napari.Evaluation,Evaluation,vessel_express._dock_widget:Evaluation,,,,,,,vessel-express-napari.ParameterTuning,ParameterTuning,False,vessel-express-napari.Evaluation,Evaluation,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -441,vollseg-napari,2.4.7,vollseg-napari,Irregular cell shape segmentation using VollSeg,Varun Kapoor,BSD 3-Clause License,https://github.com/kapoorlab/vollseg-napari,62fecd3394143be566bf4e7e,['conda'],,https://github.com/kapoorlab/vollseg-napari,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/vollseg-napari,http://api.anaconda.org/packages/conda-forge/vollseg-napari,http://anaconda.org/conda-forge/vollseg-napari,"['2.3.5', '2.3.7', '2.4.0']",2.4.0,2.4.0,['noarch'],5.0,,['pyhd8ed1ab_0'],2.3.5,conda-forge/vollseg-napari/2.3.5,1.0,0.0,2022-08-18 23:37:21.311000+00:00,2023-06-18 08:42:20.870000+00:00,conda,noarch/vollseg-napari-2.3.5-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui >=0.4.0', 'napari >=0.4.13', 'napari-plugin-engine', 'numpy', 'psygnal', 'python >=3.7', 'qtpy', 'tensorflow', 'tifffile', 'vollseg']",noarch,1660865614078.0,None-any-None,pyhd8ed1ab_0,2022-08-18 23:37:21.626000+00:00,d1d940a9d4241c1b0b7cf564783d9b9f,None,1024151.0,conda-forge/vollseg-napari/2.3.5/noarch/vollseg-napari-2.3.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/vollseg-napari/2.3.5/noarch/vollseg-napari-2.3.5-pyhd8ed1ab_0.tar.bz2,conda,2.3.5,conda-forge,['main'],public,,0.1.0,vollseg-napari.widget,Create VollSeg widget,vollseg_napari._dock_widget:plugin_wrapper_vollseg,,,,2.1,vollseg-napari,2.4.7,,Irregular cell shape segmentation using VollSeg,"# VollSeg Napari Plugin +",text/markdown,https://github.com/MMV-Lab/vessel-express-napari,Lennart Kowitz,lennart.kowitz@isas.de,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'itk', 'scikit-image', 'aicssegmentation']",>=3.7,"['Bug Tracker, https://github.com/MMV-Lab/vessel-express-napari/issues', 'Documentation, https://github.com/MMV-Lab/vessel-express-napari#README.md', 'Source Code, https://github.com/MMV-Lab/vessel-express-napari', 'User Support, https://github.com/MMV-Lab/vessel-express-napari/issues']",,True,0.0.9,conda-forge/vessel-express-napari/0.0.9,,,,,conda,noarch/vessel-express-napari-0.0.9-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['aicssegmentation', 'itk', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'qtpy', 'scikit-image', 'tifffile']",pyhd8ed1ab_0,1690338809070.0,None-any-None,noarch,2023-07-26 02:36:24.949000+00:00,6196c3fa44127a714467698406b72895,a2095f7fbd273da93e5520fb937027cb6f0644bb6bb32d12abbbc8337af16526,21505.0,conda-forge/vessel-express-napari/0.0.9/noarch/vessel-express-napari-0.0.9-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/vessel-express-napari/0.0.9/noarch/vessel-express-napari-0.0.9-pyhd8ed1ab_0.conda,conda,0.0.9,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,vessel-express-napari.Evaluation,Evaluation,vessel_express._dock_widget:Evaluation,,,,,,,vessel-express-napari.ParameterTuning,ParameterTuning,False,vessel-express-napari.Evaluation,Evaluation,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +465,vollseg-napari,2.4.7,vollseg-napari,Irregular cell shape segmentation using VollSeg,Varun Kapoor,BSD 3-Clause License,https://github.com/kapoorlab/vollseg-napari,62fecd3394143be566bf4e7e,['conda'],,https://github.com/kapoorlab/vollseg-napari,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/vollseg-napari,http://api.anaconda.org/packages/conda-forge/vollseg-napari,http://anaconda.org/conda-forge/vollseg-napari,"['2.3.5', '2.3.7', '2.4.0']",2.4.0,2.4.0,['noarch'],5.0,,['pyhd8ed1ab_0'],2.3.5,conda-forge/vollseg-napari/2.3.5,1.0,0.0,2022-08-18 23:37:21.311000+00:00,2023-06-18 08:42:20.870000+00:00,conda,noarch/vollseg-napari-2.3.5-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui >=0.4.0', 'napari >=0.4.13', 'napari-plugin-engine', 'numpy', 'psygnal', 'python >=3.7', 'qtpy', 'tensorflow', 'tifffile', 'vollseg']",noarch,1660865614078.0,None-any-None,pyhd8ed1ab_0,2022-08-18 23:37:21.626000+00:00,d1d940a9d4241c1b0b7cf564783d9b9f,None,1024151.0,conda-forge/vollseg-napari/2.3.5/noarch/vollseg-napari-2.3.5-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/vollseg-napari/2.3.5/noarch/vollseg-napari-2.3.5-pyhd8ed1ab_0.tar.bz2,conda,2.3.5,conda-forge,['main'],public,,0.1.0,vollseg-napari.widget,Create VollSeg widget,vollseg_napari._dock_widget:plugin_wrapper_vollseg,,,,2.1,vollseg-napari,2.4.7,,Irregular cell shape segmentation using VollSeg,"# VollSeg Napari Plugin @@ -47001,8 +49370,8 @@ VollSeg comes with different options to combine CARE based denoising with UNET, - The [image.sc forum](https://forum.image.sc/tag/vollseg) is the best place to start getting help and support. Make sure to use the tag `vollseg`, since we are monitoring all questions with this tag. - If you have technical questions or found a bug, feel free to [open an issue](https://github.com/kapoorlab/vollseg-napari/issues). -",text/markdown,https://github.com/kapoorlab/vollseg-napari,Varun Kapoor,varun.kapoor@kapoorlabs.org,BSD 3-Clause License,"['Development Status :: 4 - Beta', 'Intended Audience :: Science/Research', 'Topic :: Scientific/Engineering', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Framework :: napari']","['vollseg', 'napari >=0.4.13', 'magicgui >=0.4.0', 'pyqt6', 'pynvml', 'tensorflow ; platform_system != ""Darwin"" or platform_machine != ""arm64""', 'tensorflow-macos ; platform_system == ""Darwin"" and platform_machine == ""arm64""', ""pytest ; extra == 'test'"", ""pytest-qt ; extra == 'test'"", ""napari[pyqt] >=0.4.13 ; extra == 'test'""]",>=3.7,"['Source Code, https://github.com/kapoorlab/vollseg-napari', 'Documentation, https://github.com/kapoorlab/vollseg-napari', 'Bug Tracker, https://github.com/kapoorlab/vollseg-napari/issues', 'User Support, https://forum.image.sc/tag/vollseg-napari', 'Twitter, https://twitter.com/entracod']",['test'],False,2.3.7,conda-forge/vollseg-napari/2.3.7,2.4.0,conda-forge/vollseg-napari/2.4.0,,,conda,noarch/vollseg-napari-2.3.7-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui >=0.4.0', 'napari >=0.4.13', 'napari-plugin-engine', 'numpy', 'psygnal', 'python >=3.7', 'qtpy', 'tensorflow', 'tifffile', 'vollseg']",pyhd8ed1ab_0,1664885469618.0,None-any-None,noarch,2022-10-04 12:14:22.836000+00:00,c51fbf6dfbeda88a42b990fb245813f8,None,1033739.0,conda-forge/vollseg-napari/2.3.7/noarch/vollseg-napari-2.3.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/vollseg-napari/2.3.7/noarch/vollseg-napari-2.3.7-pyhd8ed1ab_0.tar.bz2,conda,2.3.7,conda-forge,['main'],conda,noarch/vollseg-napari-2.4.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui >=0.4.0', 'napari >=0.4.13', 'napari-plugin-engine', 'numpy', 'psygnal', 'python >=3.7', 'qtpy', 'tensorflow', 'tifffile', 'vollseg']",noarch,1682501218715.0,None-any-None,pyhd8ed1ab_0,2023-04-26 09:30:07.751000+00:00,540fe1afa3fab82218423049ddef7744,765ba560b0ec7cfd1db0f5df343c16368921124fd2de8bb4aa6517d0407ebd35,34523.0,conda-forge/vollseg-napari/2.4.0/noarch/vollseg-napari-2.4.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/vollseg-napari/2.4.0/noarch/vollseg-napari-2.4.0-pyhd8ed1ab_0.conda,conda,2.4.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,vollseg-napari.test_image_ascadian_3d,Ascadian (3D) sample,vollseg_napari._sample_data:_test_image_cell_3d,vollseg-napari.test_image_arabidopsis_3d,Arabidopsis (3D) sample,vollseg_napari._sample_data:_test_image_arabidopsis_3d,vollseg-napari.test_image_carcinoma_3dt,Carcinome (3D + time) sample,vollseg_napari._sample_data:_test_image_cell_3dt,vollseg-napari.widget,VollSeg,False,,,,,,,,,,,,,,,,,,,,vollseg-napari.test_image_ascadian_3d,ascadian_embryo_3d,Embryo Cells (3D),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,vollseg-napari.test_image_arabidopsis_3d,arabidopsis_3d,Arabidopsis (3D),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,vollseg-napari.test_image_carcinoma_3dt,carcinoma_cells_3dt,Breast Cancer Cells (3DT) -442,vollseg-napari-mtrack,1.4.7,VollSeg Napari MTrack Plugin,"Segment kymographs of microtubules, actin filaments and perform Ransac based fits to compute dynamic instability parameters for individual kymographs and also in batch",Varun Kapoor,BSD-3-Clause,https://github.com/Kapoorlabs-CAPED/vollseg-napari-mtrack,6435df3ba895514748f5dee2,['conda'],,https://github.com/Kapoorlabs-CAPED/vollseg-napari-mtrack,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/vollseg-napari-mtrack,http://api.anaconda.org/packages/conda-forge/vollseg-napari-mtrack,http://anaconda.org/conda-forge/vollseg-napari-mtrack,['1.1.0'],1.1.0,1.1.0,['noarch'],3.0,,['pyhd8ed1ab_0'],1.1.0,conda-forge/vollseg-napari-mtrack/1.1.0,1.0,0.0,2023-04-11 22:29:12.633000+00:00,2023-06-18 17:27:59.751000+00:00,conda,noarch/vollseg-napari-mtrack-1.1.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8,<3.11', 'qtpy', 'tifffile']",noarch,1681252012057.0,None-any-None,pyhd8ed1ab_0,2023-04-11 22:29:13.141000+00:00,66a0a2b109991bf6dae21390a21fd7b1,75d77f741eee16061f1e107a5f12686f53500ee683074218fbb59d15da2d2508,27093.0,conda-forge/vollseg-napari-mtrack/1.1.0/noarch/vollseg-napari-mtrack-1.1.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/vollseg-napari-mtrack/1.1.0/noarch/vollseg-napari-mtrack-1.1.0-pyhd8ed1ab_0.conda,conda,1.1.0,conda-forge,['main'],public,,0.2.1,vollseg-napari-mtrack.get_reader,Open data with VollSeg Napari MTrack Plugin,vollseg_napari_mtrack._reader:napari_get_reader,vollseg-napari-mtrack.get_reader,,True,2.1,vollseg-napari-mtrack,1.4.7,,"Segment kymographs of microtubules, actin filaments and perform Ransac based fits to compute dynamic instability parameters for individual kymographs and also in batch","# vollseg-napari-mtrack +",text/markdown,https://github.com/kapoorlab/vollseg-napari,Varun Kapoor,varun.kapoor@kapoorlabs.org,BSD 3-Clause License,"['Development Status :: 4 - Beta', 'Intended Audience :: Science/Research', 'Topic :: Scientific/Engineering', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Framework :: napari']","['vollseg', 'napari >=0.4.13', 'magicgui >=0.4.0', 'pyqt6', 'pynvml', 'tensorflow ; platform_system != ""Darwin"" or platform_machine != ""arm64""', 'tensorflow-macos ; platform_system == ""Darwin"" and platform_machine == ""arm64""', ""pytest ; extra == 'test'"", ""pytest-qt ; extra == 'test'"", ""napari[pyqt] >=0.4.13 ; extra == 'test'""]",>=3.7,"['Source Code, https://github.com/kapoorlab/vollseg-napari', 'Documentation, https://github.com/kapoorlab/vollseg-napari', 'Bug Tracker, https://github.com/kapoorlab/vollseg-napari/issues', 'User Support, https://forum.image.sc/tag/vollseg-napari', 'Twitter, https://twitter.com/entracod']",['test'],False,2.3.7,conda-forge/vollseg-napari/2.3.7,2.4.0,conda-forge/vollseg-napari/2.4.0,,,conda,noarch/vollseg-napari-2.3.7-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui >=0.4.0', 'napari >=0.4.13', 'napari-plugin-engine', 'numpy', 'psygnal', 'python >=3.7', 'qtpy', 'tensorflow', 'tifffile', 'vollseg']",pyhd8ed1ab_0,1664885469618.0,None-any-None,noarch,2022-10-04 12:14:22.836000+00:00,c51fbf6dfbeda88a42b990fb245813f8,None,1033739.0,conda-forge/vollseg-napari/2.3.7/noarch/vollseg-napari-2.3.7-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/vollseg-napari/2.3.7/noarch/vollseg-napari-2.3.7-pyhd8ed1ab_0.tar.bz2,conda,2.3.7,conda-forge,['main'],conda,noarch/vollseg-napari-2.4.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui >=0.4.0', 'napari >=0.4.13', 'napari-plugin-engine', 'numpy', 'psygnal', 'python >=3.7', 'qtpy', 'tensorflow', 'tifffile', 'vollseg']",noarch,1682501218715.0,None-any-None,pyhd8ed1ab_0,2023-04-26 09:30:07.751000+00:00,540fe1afa3fab82218423049ddef7744,765ba560b0ec7cfd1db0f5df343c16368921124fd2de8bb4aa6517d0407ebd35,34523.0,conda-forge/vollseg-napari/2.4.0/noarch/vollseg-napari-2.4.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/vollseg-napari/2.4.0/noarch/vollseg-napari-2.4.0-pyhd8ed1ab_0.conda,conda,2.4.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,vollseg-napari.test_image_ascadian_3d,Ascadian (3D) sample,vollseg_napari._sample_data:_test_image_cell_3d,vollseg-napari.test_image_arabidopsis_3d,Arabidopsis (3D) sample,vollseg_napari._sample_data:_test_image_arabidopsis_3d,vollseg-napari.test_image_carcinoma_3dt,Carcinome (3D + time) sample,vollseg_napari._sample_data:_test_image_cell_3dt,vollseg-napari.widget,VollSeg,False,,,,,,,,,,,,,,,,,,,,vollseg-napari.test_image_ascadian_3d,ascadian_embryo_3d,Embryo Cells (3D),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,vollseg-napari.test_image_arabidopsis_3d,arabidopsis_3d,Arabidopsis (3D),,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,vollseg-napari.test_image_carcinoma_3dt,carcinoma_cells_3dt,Breast Cancer Cells (3DT) +466,vollseg-napari-mtrack,1.4.7,VollSeg Napari MTrack Plugin,"Segment kymographs of microtubules, actin filaments and perform Ransac based fits to compute dynamic instability parameters for individual kymographs and also in batch",Varun Kapoor,BSD-3-Clause,https://github.com/Kapoorlabs-CAPED/vollseg-napari-mtrack,6435df3ba895514748f5dee2,['conda'],,https://github.com/Kapoorlabs-CAPED/vollseg-napari-mtrack,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/vollseg-napari-mtrack,http://api.anaconda.org/packages/conda-forge/vollseg-napari-mtrack,http://anaconda.org/conda-forge/vollseg-napari-mtrack,['1.1.0'],1.1.0,1.1.0,['noarch'],3.0,,['pyhd8ed1ab_0'],1.1.0,conda-forge/vollseg-napari-mtrack/1.1.0,1.0,0.0,2023-04-11 22:29:12.633000+00:00,2023-06-18 17:27:59.751000+00:00,conda,noarch/vollseg-napari-mtrack-1.1.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari', 'numpy', 'python >=3.8,<3.11', 'qtpy', 'tifffile']",noarch,1681252012057.0,None-any-None,pyhd8ed1ab_0,2023-04-11 22:29:13.141000+00:00,66a0a2b109991bf6dae21390a21fd7b1,75d77f741eee16061f1e107a5f12686f53500ee683074218fbb59d15da2d2508,27093.0,conda-forge/vollseg-napari-mtrack/1.1.0/noarch/vollseg-napari-mtrack-1.1.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/vollseg-napari-mtrack/1.1.0/noarch/vollseg-napari-mtrack-1.1.0-pyhd8ed1ab_0.conda,conda,1.1.0,conda-forge,['main'],public,,0.2.1,vollseg-napari-mtrack.get_reader,Open data with VollSeg Napari MTrack Plugin,vollseg_napari_mtrack._reader:napari_get_reader,vollseg-napari-mtrack.get_reader,,True,2.1,vollseg-napari-mtrack,1.4.7,,"Segment kymographs of microtubules, actin filaments and perform Ransac based fits to compute dynamic instability parameters for individual kymographs and also in batch","# vollseg-napari-mtrack [![License BSD-3](https://img.shields.io/pypi/l/vollseg-napari-mtrack.svg?color=green)](https://github.com/Kapoorlabs-CAPED/vollseg-napari-mtrack/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/vollseg-napari-mtrack.svg?color=green)](https://pypi.org/project/vollseg-napari-mtrack) @@ -47072,8 +49441,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/Kapoorlabs-CAPED/vollseg-napari-mtrack,Varun Kapoor,randomaccessiblekapoor@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'caped-ai', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/Kapoorlabs-CAPED/vollseg-napari-mtrack/issues', 'Documentation, https://github.com/Kapoorlabs-CAPED/vollseg-napari-mtrack#README.md', 'Source Code, https://github.com/Kapoorlabs-CAPED/vollseg-napari-mtrack', 'User Support, https://github.com/Kapoorlabs-CAPED/vollseg-napari-mtrack/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,vollseg-napari-mtrack.get_microtubule_test_data,Load sample data from VollSeg Napari MTrack Plugin,vollseg_napari_mtrack._sample_data:get_microtubule_test_data,vollseg-napari-mtrack.widget,MTrack,vollseg_napari_mtrack._widget:plugin_wrapper_mtrack,,,,vollseg-napari-mtrack.widget,MTrack,False,,,,,,,,,,,,,,,,,,,,vollseg-napari-mtrack.get_microtubule_test_data,get_microtubule_test_data,Test Microtubule Kymographs,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -443,vollseg-napari-trackmate,2.6.0,vollseg-napari-trackmate,Track analysis using TrackMate xml and csv generated tracks using NapaTrackMater as the base library,"Varun Kapoor, Mari Tolonen, Jakub Sedzinski",BSD-3-Clause,https://github.com/Kapoorlabs-CAPED/vollseg-napari-trackmate,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,vollseg-napari-trackmate.get_test_tracks_xenopus,Load sample data from VollSeg Napari NapaTrackMater Plugin,vollseg_napari_trackmate._sample_data:get_test_tracks_xenopus,,,,2.1,vollseg-napari-trackmate,2.6.0,,Track analysis using TrackMate xml and csv generated tracks using NapaTrackMater as the base library,"# vollseg-napari-trackmate +",text/markdown,https://github.com/Kapoorlabs-CAPED/vollseg-napari-mtrack,Varun Kapoor,randomaccessiblekapoor@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['numpy', 'magicgui', 'qtpy', 'caped-ai', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/Kapoorlabs-CAPED/vollseg-napari-mtrack/issues', 'Documentation, https://github.com/Kapoorlabs-CAPED/vollseg-napari-mtrack#README.md', 'Source Code, https://github.com/Kapoorlabs-CAPED/vollseg-napari-mtrack', 'User Support, https://github.com/Kapoorlabs-CAPED/vollseg-napari-mtrack/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,vollseg-napari-mtrack.get_microtubule_test_data,Load sample data from VollSeg Napari MTrack Plugin,vollseg_napari_mtrack._sample_data:get_microtubule_test_data,vollseg-napari-mtrack.widget,MTrack,vollseg_napari_mtrack._widget:plugin_wrapper_mtrack,,,,vollseg-napari-mtrack.widget,MTrack,False,,,,,,,,,,,,,,,,,,,,vollseg-napari-mtrack.get_microtubule_test_data,get_microtubule_test_data,Test Microtubule Kymographs,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +467,vollseg-napari-trackmate,2.6.2,vollseg-napari-trackmate,Track analysis using TrackMate xml and csv generated tracks using NapaTrackMater as the base library,"Varun Kapoor, Mari Tolonen, Jakub Sedzinski",BSD-3-Clause,https://github.com/Kapoorlabs-CAPED/vollseg-napari-trackmate,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,public,,0.2.1,vollseg-napari-trackmate.get_test_tracks_xenopus,Load sample data from VollSeg Napari NapaTrackMater Plugin,vollseg_napari_trackmate._sample_data:get_test_tracks_xenopus,,,,2.1,vollseg-napari-trackmate,2.6.2,,Track analysis using TrackMate xml and csv generated tracks using NapaTrackMater as the base library,"# vollseg-napari-trackmate [![License BSD-3](https://img.shields.io/pypi/l/vollseg-napari-trackmate.svg?color=green)](https://github.com/Kapoorlabs-CAPED/vollseg-napari-trackmate/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/vollseg-napari-trackmate.svg?color=green)](https://pypi.org/project/vollseg-napari-trackmate) @@ -47146,8 +49515,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/Kapoorlabs-CAPED/vollseg-napari-trackmate,"Varun Kapoor, Mari Tolonen, Jakub Sedzinski",randomaccessiblekapoor@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['napari-plugin-engine >=0.1.4', 'caped-ai', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]",>=3.8,"['Bug Tracker, https://github.com/Kapoorlabs-CAPED/vollseg-napari-trackmate/issues', 'Documentation, https://github.com/Kapoorlabs-CAPED/vollseg-napari-trackmate#README.md', 'Source Code, https://github.com/Kapoorlabs-CAPED/vollseg-napari-trackmate', 'User Support, https://github.com/Kapoorlabs-CAPED/vollseg-napari-trackmate/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,vollseg-napari-trackmate.widget,NapaTrackMater,vollseg_napari_trackmate._widget:plugin_wrapper_track,,,,,,,vollseg-napari-trackmate.widget,NapaTrackMater,False,,,,,,,,,,,,,,,,,,,,vollseg-napari-trackmate.get_test_tracks_xenopus,get_test_tracks_xenopus,Test Track Data,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -444,waver,0.0.4,waver,Wave simulations,Nicholas Sofroniew,BSD-3,https://github.com/sofroniewn/waver,61495c46c18da205b8dcfc8a,['conda'],"Run simulations of the wave equation in nD on grids of variable speed in +",text/markdown,https://github.com/Kapoorlabs-CAPED/vollseg-napari-trackmate,"Varun Kapoor, Mari Tolonen, Jakub Sedzinski",randomaccessiblekapoor@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['napari-plugin-engine>=0.1.4', 'caped-ai', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']",>=3.8,"['Bug Tracker, https://github.com/Kapoorlabs-CAPED/vollseg-napari-trackmate/issues', 'Documentation, https://github.com/Kapoorlabs-CAPED/vollseg-napari-trackmate#README.md', 'Source Code, https://github.com/Kapoorlabs-CAPED/vollseg-napari-trackmate', 'User Support, https://github.com/Kapoorlabs-CAPED/vollseg-napari-trackmate/issues']",['testing'],False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,vollseg-napari-trackmate.widget,NapaTrackMater,vollseg_napari_trackmate._widget:plugin_wrapper_track,,,,,,,vollseg-napari-trackmate.widget,NapaTrackMater,False,,,,,,,,,,,,,,,,,,,,vollseg-napari-trackmate.get_test_tracks_xenopus,get_test_tracks_xenopus,Test Track Data,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +468,waver,0.0.4,waver,Wave simulations,Nicholas Sofroniew,BSD-3,https://github.com/sofroniewn/waver,61495c46c18da205b8dcfc8a,['conda'],"Run simulations of the wave equation in nD on grids of variable speed in Python. This library owes a lot of its design and approach to the fdtd library, a Python 3D electromagnetic FDTD simulator. ",https://github.com/sofroniewn/waver,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/waver,http://api.anaconda.org/packages/conda-forge/waver,http://anaconda.org/conda-forge/waver,['0.0.4'],0.0.4,0.0.4,['noarch'],3.0,,"['pyhd8ed1ab_0', 'pyhd8ed1ab_1']",0.0.4,conda-forge/waver/0.0.4,1.0,0.0,2021-09-21 04:15:00.832000+00:00,2023-06-16 19:27:27.328000+00:00,conda,noarch/waver-0.0.4-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui >=0.2.10', 'napari >=0.4.10', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'zarr']",noarch,1632197513975.0,None-any-None,pyhd8ed1ab_0,2021-09-21 04:15:01.111000+00:00,d3490427b427d2b5b67c981185d082d9,None,21344.0,conda-forge/waver/0.0.4/noarch/waver-0.0.4-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/waver/0.0.4/noarch/waver-0.0.4-pyhd8ed1ab_0.tar.bz2,conda,0.0.4,conda-forge,['main'],public,,0.2.1,waver.simulation,simulation,waver._dock_widget:simulation,waver.napari_get_reader,['*'],True,2.1,waver,0.0.4,['UNKNOWN'],Wave simulations,"# waver @@ -47354,8 +49723,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/sofroniewn/waver,Nicholas Sofroniew,sofroniewn@gmail.com,BSD-3,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['magicgui (>=0.2.10)', 'napari (>=0.4.10)', 'napari-plugin-engine (>=0.1.4)', 'numpy', 'zarr']",>=3.7,,,True,,,,,,,conda,noarch/waver-0.0.4-pyhd8ed1ab_1.tar.bz2,1.0,BSD-3-Clause,False,python,"['magicgui >=0.2.10', 'napari >=0.4.10', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'zarr']",pyhd8ed1ab_1,1643230992831.0,None-any-None,noarch,2022-01-26 21:07:01.704000+00:00,90bc2572a1f008f36f46cf351d720a04,None,21711.0,conda-forge/waver/0.0.4/noarch/waver-0.0.4-pyhd8ed1ab_1.tar.bz2,//api.anaconda.org/download/conda-forge/waver/0.0.4/noarch/waver-0.0.4-pyhd8ed1ab_1.tar.bz2,conda,0.0.4,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,waver.sample_fourier,sample_fourier,waver._dock_widget:sample_fourier,,,,,,,waver.simulation,simulation,False,waver.sample_fourier,sample_fourier,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -445,workshop-demo,0.0.2,workshop demo,"A demo napari plugin incorporating reader, writer and dock widget contributions using the new npe2 plugin architecture.",Draga Doncila Pop,BSD-3-Clause,https://github.com/DragaDoncila/workshop-demo,61f3afa703b93eb2b198701f,['conda'],,https://github.com/DragaDoncila/workshop-demo,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/workshop-demo,http://api.anaconda.org/packages/conda-forge/workshop-demo,http://anaconda.org/conda-forge/workshop-demo,"['0.0.1', '0.0.2']",0.0.2,0.0.2,['noarch'],4.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/workshop-demo/0.0.1,1.0,0.0,2022-01-28 08:56:05.472000+00:00,2023-06-18 08:40:38.984000+00:00,conda,noarch/workshop-demo-0.0.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core', 'imagecodecs', 'napari', 'napari-plugin-engine >=0.1.4', 'npe2', 'numpy', 'python >=3.7', 'scikit-image', 'tifffile']",noarch,1643360011122.0,None-any-None,pyhd8ed1ab_0,2022-01-28 08:56:05.703000+00:00,a2dbf113cb3cb90f26c0d46d3a72a25e,None,16852.0,conda-forge/workshop-demo/0.0.1/noarch/workshop-demo-0.0.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/workshop-demo/0.0.1/noarch/workshop-demo-0.0.1-pyhd8ed1ab_0.tar.bz2,conda,0.0.1,conda-forge,['main'],public,,0.2.1,workshop-demo.get_reader,tracking challenge reader,workshop_demo._reader:napari_get_reader,workshop-demo.get_reader,,True,2.1,workshop-demo,0.0.2,['UNKNOWN'],"A demo napari plugin incorporating reader, writer and dock widget contributions using the new npe2 plugin architecture.","# workshop-demo +",text/markdown,https://github.com/sofroniewn/waver,Nicholas Sofroniew,sofroniewn@gmail.com,BSD-3,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['magicgui (>=0.2.10)', 'napari (>=0.4.10)', 'napari-plugin-engine (>=0.1.4)', 'numpy', 'zarr']",>=3.7,,,True,,,,,,,conda,noarch/waver-0.0.4-pyhd8ed1ab_1.tar.bz2,1.0,BSD-3-Clause,False,python,"['magicgui >=0.2.10', 'napari >=0.4.10', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'zarr']",pyhd8ed1ab_1,1643230992831.0,None-any-None,noarch,2022-01-26 21:07:01.704000+00:00,90bc2572a1f008f36f46cf351d720a04,None,21711.0,conda-forge/waver/0.0.4/noarch/waver-0.0.4-pyhd8ed1ab_1.tar.bz2,//api.anaconda.org/download/conda-forge/waver/0.0.4/noarch/waver-0.0.4-pyhd8ed1ab_1.tar.bz2,conda,0.0.4,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,waver.sample_fourier,sample_fourier,waver._dock_widget:sample_fourier,,,,,,,waver.simulation,simulation,False,waver.sample_fourier,sample_fourier,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +469,workshop-demo,0.0.2,workshop demo,"A demo napari plugin incorporating reader, writer and dock widget contributions using the new npe2 plugin architecture.",Draga Doncila Pop,BSD-3-Clause,https://github.com/DragaDoncila/workshop-demo,61f3afa703b93eb2b198701f,['conda'],,https://github.com/DragaDoncila/workshop-demo,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/workshop-demo,http://api.anaconda.org/packages/conda-forge/workshop-demo,http://anaconda.org/conda-forge/workshop-demo,"['0.0.1', '0.0.2']",0.0.2,0.0.2,['noarch'],4.0,,['pyhd8ed1ab_0'],0.0.1,conda-forge/workshop-demo/0.0.1,1.0,0.0,2022-01-28 08:56:05.472000+00:00,2023-06-18 08:40:38.984000+00:00,conda,noarch/workshop-demo-0.0.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core', 'imagecodecs', 'napari', 'napari-plugin-engine >=0.1.4', 'npe2', 'numpy', 'python >=3.7', 'scikit-image', 'tifffile']",noarch,1643360011122.0,None-any-None,pyhd8ed1ab_0,2022-01-28 08:56:05.703000+00:00,a2dbf113cb3cb90f26c0d46d3a72a25e,None,16852.0,conda-forge/workshop-demo/0.0.1/noarch/workshop-demo-0.0.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/workshop-demo/0.0.1/noarch/workshop-demo-0.0.1-pyhd8ed1ab_0.tar.bz2,conda,0.0.1,conda-forge,['main'],public,,0.2.1,workshop-demo.get_reader,tracking challenge reader,workshop_demo._reader:napari_get_reader,workshop-demo.get_reader,,True,2.1,workshop-demo,0.0.2,['UNKNOWN'],"A demo napari plugin incorporating reader, writer and dock widget contributions using the new npe2 plugin architecture.","# workshop-demo [![License](https://img.shields.io/pypi/l/workshop-demo.svg?color=green)](https://github.com/DragaDoncila/workshop-demo/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/workshop-demo.svg?color=green)](https://pypi.org/project/workshop-demo) @@ -47494,8 +49863,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/DragaDoncila/workshop-demo,Draga Doncila Pop,ddoncilapop@contractor.chanzuckerberg.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: MacOS :: MacOS X', 'Operating System :: POSIX :: Linux', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['dask[array]', 'imagecodecs', 'napari', 'napari-plugin-engine (>=0.1.4)', 'npe2', 'numpy', 'scikit-image', 'tifffile']",>=3.7,"['Bug Tracker, https://github.com/DragaDoncila/workshop-demo/issues', 'Documentation, https://github.com/DragaDoncila/workshop-demo#README.md', 'Source Code, https://github.com/DragaDoncila/workshop-demo', 'User Support, https://github.com/DragaDoncila/workshop-demo/issues']",,False,0.0.2,conda-forge/workshop-demo/0.0.2,,,,,conda,noarch/workshop-demo-0.0.2-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['dask-core', 'imagecodecs', 'magicgui', 'napari', 'napari-plugin-engine >=0.1.4', 'npe2', 'numpy', 'python >=3.7', 'qtpy', 'scikit-image', 'tifffile']",pyhd8ed1ab_0,1683049501384.0,None-any-None,noarch,2023-05-02 17:47:26.632000+00:00,7b39bb7d5a33112f4c25eddde9db0215,a382fc12943eb3c9b444aa60b4d9ee55d205c5ee88eb3c008c3bb06a98624a70,19024.0,conda-forge/workshop-demo/0.0.2/noarch/workshop-demo-0.0.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/workshop-demo/0.0.2/noarch/workshop-demo-0.0.2-pyhd8ed1ab_0.conda,conda,0.0.2,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,workshop-demo.get_segment_widget,open threshold widget,workshop_demo._dock_widget:segment_by_threshold,workshop-demo.get_highlight_widget,open highlight widget,workshop_demo._dock_widget:SegmentationDiffHighlight,workshop-demo.write_labels,save to zip,workshop_demo._writer:labels_to_zip,workshop-demo.get_segment_widget,Segment by Thresholding,False,workshop-demo.get_highlight_widget,Highlight Segmentation Differences,False,,,,,,,,,,workshop-demo.write_labels,['labels*'],label zipper,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['.zip'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -446,World2Data,0.0.3,World2Data,A napari plugin in order to convert the world information to the data of a 2D/3D layer,"Marc Boucsein, Robin Koch",BSD-3,https://github.com/MBPhys/World2Data,62091fc203b93eb2b154abae,['conda'],,https://github.com/MBPhys/World2Data,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/world2data,http://api.anaconda.org/packages/conda-forge/world2data,http://anaconda.org/conda-forge/world2data,['0.0.3'],0.0.3,0.0.3,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.3,conda-forge/world2data/0.0.3,1.0,0.0,2022-02-13 15:11:59.722000+00:00,2023-06-18 08:40:51.028000+00:00,conda,noarch/world2data-0.0.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core', 'gryds', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'scikit-image']",noarch,1644764983597.0,None-any-None,pyhd8ed1ab_0,2022-02-13 15:12:00.311000+00:00,784563476f9bbedb252c824de62b9d01,None,10031.0,conda-forge/world2data/0.0.3/noarch/world2data-0.0.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/world2data/0.0.3/noarch/world2data-0.0.3-pyhd8ed1ab_0.tar.bz2,conda,0.0.3,conda-forge,['main'],public,,0.2.1,World2Data.World2Data,World2Data,World_2_Data.World_to_data_script:World2Data,,,,2.1,World2Data,0.0.3,['UNKNOWN'],A napari plugin in order to convert the world information to the data of a 2D/3D layer,"# World2Data +",text/markdown,https://github.com/DragaDoncila/workshop-demo,Draga Doncila Pop,ddoncilapop@contractor.chanzuckerberg.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: MacOS :: MacOS X', 'Operating System :: POSIX :: Linux', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['dask[array]', 'imagecodecs', 'napari', 'napari-plugin-engine (>=0.1.4)', 'npe2', 'numpy', 'scikit-image', 'tifffile']",>=3.7,"['Bug Tracker, https://github.com/DragaDoncila/workshop-demo/issues', 'Documentation, https://github.com/DragaDoncila/workshop-demo#README.md', 'Source Code, https://github.com/DragaDoncila/workshop-demo', 'User Support, https://github.com/DragaDoncila/workshop-demo/issues']",,False,0.0.2,conda-forge/workshop-demo/0.0.2,,,,,conda,noarch/workshop-demo-0.0.2-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['dask-core', 'imagecodecs', 'magicgui', 'napari', 'napari-plugin-engine >=0.1.4', 'npe2', 'numpy', 'python >=3.7', 'qtpy', 'scikit-image', 'tifffile']",pyhd8ed1ab_0,1683049501384.0,None-any-None,noarch,2023-05-02 17:47:26.632000+00:00,7b39bb7d5a33112f4c25eddde9db0215,a382fc12943eb3c9b444aa60b4d9ee55d205c5ee88eb3c008c3bb06a98624a70,19024.0,conda-forge/workshop-demo/0.0.2/noarch/workshop-demo-0.0.2-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/workshop-demo/0.0.2/noarch/workshop-demo-0.0.2-pyhd8ed1ab_0.conda,conda,0.0.2,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,workshop-demo.get_segment_widget,open threshold widget,workshop_demo._dock_widget:segment_by_threshold,workshop-demo.get_highlight_widget,open highlight widget,workshop_demo._dock_widget:SegmentationDiffHighlight,workshop-demo.write_labels,save to zip,workshop_demo._writer:labels_to_zip,workshop-demo.get_segment_widget,Segment by Thresholding,False,workshop-demo.get_highlight_widget,Highlight Segmentation Differences,False,,,,,,,,,,workshop-demo.write_labels,['labels*'],label zipper,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,['.zip'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +470,World2Data,0.0.3,World2Data,A napari plugin in order to convert the world information to the data of a 2D/3D layer,"Marc Boucsein, Robin Koch",BSD-3,https://github.com/MBPhys/World2Data,62091fc203b93eb2b154abae,['conda'],,https://github.com/MBPhys/World2Data,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/world2data,http://api.anaconda.org/packages/conda-forge/world2data,http://anaconda.org/conda-forge/world2data,['0.0.3'],0.0.3,0.0.3,['noarch'],3.0,,['pyhd8ed1ab_0'],0.0.3,conda-forge/world2data/0.0.3,1.0,0.0,2022-02-13 15:11:59.722000+00:00,2023-06-18 08:40:51.028000+00:00,conda,noarch/world2data-0.0.3-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['dask-core', 'gryds', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'python >=3.7', 'scikit-image']",noarch,1644764983597.0,None-any-None,pyhd8ed1ab_0,2022-02-13 15:12:00.311000+00:00,784563476f9bbedb252c824de62b9d01,None,10031.0,conda-forge/world2data/0.0.3/noarch/world2data-0.0.3-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/world2data/0.0.3/noarch/world2data-0.0.3-pyhd8ed1ab_0.tar.bz2,conda,0.0.3,conda-forge,['main'],public,,0.2.1,World2Data.World2Data,World2Data,World_2_Data.World_to_data_script:World2Data,,,,2.1,World2Data,0.0.3,['UNKNOWN'],A napari plugin in order to convert the world information to the data of a 2D/3D layer,"# World2Data [![License](https://img.shields.io/pypi/l/napari-medical-image-formats.svg?color=green)](https://github.com/MBPhys/World2Data/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/World2Data.svg?color=green)](https://pypi.org/project/World2Data) @@ -47543,8 +49912,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/MBPhys/World2Data,"Marc Boucsein, Robin Koch",,BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'gryds', 'dask', 'scikit-image']",>=3.7,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,World2Data.World2Data,World2Data,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -447,yt-napari,0.5.0,yt-napari,A napari plugin for loading data from yt,Chris Havlin,BSD-3-Clause,https://github.com/data-exp-lab/yt-napari,62ab586c76d1913f9ff4c2a7,['conda'],,https://github.com/data-exp-lab/yt-napari,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/yt-napari,http://api.anaconda.org/packages/conda-forge/yt-napari,http://anaconda.org/conda-forge/yt-napari,"['0.0.1', '0.2.1', '0.3.0', '0.5.0']",0.5.0,0.5.0,['noarch'],11.0,https://github.com/data-exp-lab/yt-napari,['pyhd8ed1ab_0'],0.0.1,conda-forge/yt-napari/0.0.1,1.0,0.0,2022-06-16 16:20:57.825000+00:00,2024-06-11 18:36:05.435000+00:00,conda,noarch/yt-napari-0.0.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui >=0.4.0', 'napari >=0.4.13', 'npe2', 'numpy', 'pydantic', 'python >=3.7', 'yt >=4.0.1']",noarch,1655396294710.0,None-any-None,pyhd8ed1ab_0,2022-06-16 16:20:58.285000+00:00,2e1530bb42e4dad47fb4d9766c88049e,None,28992.0,conda-forge/yt-napari/0.0.1/noarch/yt-napari-0.0.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/yt-napari/0.0.1/noarch/yt-napari-0.0.1-pyhd8ed1ab_0.tar.bz2,conda,0.0.1,conda-forge,['main'],public,,0.2.1,yt-napari.get_reader,Open data with yt-napari,yt_napari._reader:napari_get_reader,yt-napari.get_reader,['*.json'],False,2.1,yt-napari,0.5.0,,A napari plugin for loading data from yt,"# yt-napari +",text/markdown,https://github.com/MBPhys/World2Data,"Marc Boucsein, Robin Koch",,BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['napari-plugin-engine (>=0.1.4)', 'numpy', 'gryds', 'dask', 'scikit-image']",>=3.7,,,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,World2Data.World2Data,World2Data,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +471,yt-napari,0.5.0,yt-napari,A napari plugin for loading data from yt,Chris Havlin,BSD-3-Clause,https://github.com/data-exp-lab/yt-napari,62ab586c76d1913f9ff4c2a7,['conda'],,https://github.com/data-exp-lab/yt-napari,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/yt-napari,http://api.anaconda.org/packages/conda-forge/yt-napari,http://anaconda.org/conda-forge/yt-napari,"['0.0.1', '0.2.1', '0.3.0', '0.5.0']",0.5.0,0.5.0,['noarch'],11.0,https://github.com/data-exp-lab/yt-napari,['pyhd8ed1ab_0'],0.0.1,conda-forge/yt-napari/0.0.1,1.0,0.0,2022-06-16 16:20:57.825000+00:00,2024-06-11 18:36:05.435000+00:00,conda,noarch/yt-napari-0.0.1-pyhd8ed1ab_0.tar.bz2,0.0,BSD-3-Clause,False,python,"['magicgui >=0.4.0', 'napari >=0.4.13', 'npe2', 'numpy', 'pydantic', 'python >=3.7', 'yt >=4.0.1']",noarch,1655396294710.0,None-any-None,pyhd8ed1ab_0,2022-06-16 16:20:58.285000+00:00,2e1530bb42e4dad47fb4d9766c88049e,None,28992.0,conda-forge/yt-napari/0.0.1/noarch/yt-napari-0.0.1-pyhd8ed1ab_0.tar.bz2,//api.anaconda.org/download/conda-forge/yt-napari/0.0.1/noarch/yt-napari-0.0.1-pyhd8ed1ab_0.tar.bz2,conda,0.0.1,conda-forge,['main'],public,,0.2.1,yt-napari.get_reader,Open data with yt-napari,yt_napari._reader:napari_get_reader,yt-napari.get_reader,['*.json'],False,2.1,yt-napari,0.5.0,,A napari plugin for loading data from yt,"# yt-napari [![License](https://img.shields.io/pypi/l/yt-napari.svg?color=green)](https://github.com/data-exp-lab/yt-napari/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/yt-napari.svg?color=green)](https://pypi.org/project/yt-napari) @@ -47827,8 +50196,8 @@ https://napari.org/plugins/stable/index.html [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ [yt]: https://yt-project.org/ -",text/markdown,https://github.com/data-exp-lab/yt-napari,Chris Havlin,chris.havlin@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Topic :: Software Development :: Testing']","['magicgui >=0.6.1', 'napari >=0.4.19', 'numpy', 'packaging', 'pydantic >2.0', 'qtpy', 'unyt', 'yt >=4.0.1', ""pytest ; extra == 'dev'"", ""pytest-qt ; extra == 'dev'"", ""taskipy ; extra == 'dev'"", ""sphinx ; extra == 'docs'"", ""nbsphinx <0.8.8 ; extra == 'docs'"", ""sphinx-jsonschema <1.19.0 ; extra == 'docs'"", ""Jinja2 <3.1.0 ; extra == 'docs'"", ""dask[array,distributed] ; extra == 'full'""]",>=3.8,"['Bug Tracker, https://github.com/data-exp-lab/yt-napari/issues', 'Documentation, https://github.com/data-exp-lab/yt-napari#README.md', 'Source Code, https://github.com/data-exp-lab/yt-napari', 'User Support, https://github.com/data-exp-lab/yt-napari/issues']","['dev', 'docs', 'full']",False,0.2.1,conda-forge/yt-napari/0.2.1,0.3.0,conda-forge/yt-napari/0.3.0,0.5.0,conda-forge/yt-napari/0.5.0,conda,noarch/yt-napari-0.2.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui >=0.4.0', 'napari >=0.4.13', 'numpy', 'packaging', 'pydantic', 'python >=3.8', 'qtpy', 'unyt', 'yt >=4.0.1']",pyhd8ed1ab_0,1694021314805.0,None-any-None,noarch,2023-09-06 17:30:29.632000+00:00,d8593518ef4cad89260a1c52f98b8690,381cbdad32efa51915ea59061813ced46bc0d5d813f263f7cdce5f0b35b5e26d,48851.0,conda-forge/yt-napari/0.2.1/noarch/yt-napari-0.2.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/yt-napari/0.2.1/noarch/yt-napari-0.2.1-pyhd8ed1ab_0.conda,conda,0.2.1,conda-forge,['main'],conda,noarch/yt-napari-0.3.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui >=0.4.0', 'napari >=0.4.13', 'numpy', 'packaging', 'pydantic', 'python >=3.8', 'qtpy', 'unyt', 'yt >=4.0.1']",noarch,1702078287063.0,None-any-None,pyhd8ed1ab_0,2023-12-08 23:33:28.955000+00:00,eb7adbc8d0e02ca33fc7449e9cf051be,15e2a1a9fe3a0a6aaf1ee4ced2cdd873b9d4bd3de2785558de7aa5aa1772de56,52290.0,conda-forge/yt-napari/0.3.0/noarch/yt-napari-0.3.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/yt-napari/0.3.0/noarch/yt-napari-0.3.0-pyhd8ed1ab_0.conda,conda,0.3.0,conda-forge,['main'],conda,noarch/yt-napari-0.5.0-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['magicgui >=0.6.1', 'napari >=0.4.19', 'numpy', 'packaging', 'pydantic', 'python >=3.8', 'qtpy', 'unyt', 'yt >=4.0.1']",BSD-3-Clause,python,1718130856542.0,2024-06-11 18:36:02.348000+00:00,d143cf1e87257f3ad507ed3430101810,0e389af4bf81a62b41ee4fa4fc1ca84d7ef048ba28d927bf0b7267fed0c5af8b,53935.0,conda-forge/yt-napari/0.5.0/noarch/yt-napari-0.5.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/yt-napari/0.5.0/noarch/yt-napari-0.5.0-pyhd8ed1ab_0.conda,conda,0.5.0,conda-forge,['main'],,yt-napari.reader_widget,Read in a selection of data from yt,yt_napari._widget_reader:ReaderWidget,yt-napari.timeseries_widget,Read 2D selections from yt timeseries,yt_napari._widget_reader:TimeSeriesReader,yt-napari.metadata_widget,Inspect the metadata for a yt dataset,yt_napari._widget_matadata:MetadataWidget,yt-napari.reader_widget,yt Reader,False,yt-napari.timeseries_widget,yt Time Series Reader,False,yt-napari.metadata_widget,yt Metadata Explorer,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, -448,zarpaint,0.4.0,zarpaint,Paint segmentations directly to on-disk/remote zarr arrays,Abigail S McGovern and Juan Nunez-Iglesias,BSD-3,https://github.com/jni/zarpaint,65593cfc41f0958ec6b9319b,['conda'],,https://pypi.org/project/zarpaint,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/zarpaint,http://api.anaconda.org/packages/conda-forge/zarpaint,http://anaconda.org/conda-forge/zarpaint,"['0.3.1', '0.4.0']",0.4.0,0.4.0,['noarch'],7.0,https://github.com/jni/zarpaint,['pyh9208f05_0'],0.3.1,conda-forge/zarpaint/0.3.1,1.0,0.0,2023-11-18 22:38:49.636000+00:00,2024-06-28 01:25:11.567000+00:00,conda,noarch/zarpaint-0.3.1-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari >=0.4.18', 'numpy', 'python >=3.7', 'pyyaml', 'qtpy', 'scikit-image', 'scipy', 'toolz', 'zarr']",noarch,1700347004204.0,None-any-None,pyh9208f05_0,2023-11-18 22:38:50.049000+00:00,f3bc8678c34763059a897a9a9d36ae49,b4ec9da7d40543e97c5b14ee317ff546e39764db86c9921de318cbb163f0d33c,20741.0,conda-forge/zarpaint/0.3.1/noarch/zarpaint-0.3.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/zarpaint/0.3.1/noarch/zarpaint-0.3.1-pyh9208f05_0.conda,conda,0.3.1,conda-forge,['main'],public,,0.2.0,zarpaint.add_points_3d_with_alt_click,Add Points With Alt-Click in 3D…,zarpaint:add_points_3d_with_alt_click,zarpaint.get_reader,['*.zarr'],True,2.1,zarpaint,0.4.0,,Paint segmentations directly to on-disk/remote zarr arrays,"# zarpaint +",text/markdown,https://github.com/data-exp-lab/yt-napari,Chris Havlin,chris.havlin@gmail.com,BSD-3-Clause,"['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Topic :: Software Development :: Testing']","['magicgui >=0.6.1', 'napari >=0.4.19', 'numpy', 'packaging', 'pydantic >2.0', 'qtpy', 'unyt', 'yt >=4.0.1', ""pytest ; extra == 'dev'"", ""pytest-qt ; extra == 'dev'"", ""taskipy ; extra == 'dev'"", ""sphinx ; extra == 'docs'"", ""nbsphinx <0.8.8 ; extra == 'docs'"", ""sphinx-jsonschema <1.19.0 ; extra == 'docs'"", ""Jinja2 <3.1.0 ; extra == 'docs'"", ""dask[array,distributed] ; extra == 'full'""]",>=3.8,"['Bug Tracker, https://github.com/data-exp-lab/yt-napari/issues', 'Documentation, https://github.com/data-exp-lab/yt-napari#README.md', 'Source Code, https://github.com/data-exp-lab/yt-napari', 'User Support, https://github.com/data-exp-lab/yt-napari/issues']","['dev', 'docs', 'full']",False,0.2.1,conda-forge/yt-napari/0.2.1,0.3.0,conda-forge/yt-napari/0.3.0,0.5.0,conda-forge/yt-napari/0.5.0,conda,noarch/yt-napari-0.2.1-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui >=0.4.0', 'napari >=0.4.13', 'numpy', 'packaging', 'pydantic', 'python >=3.8', 'qtpy', 'unyt', 'yt >=4.0.1']",pyhd8ed1ab_0,1694021314805.0,None-any-None,noarch,2023-09-06 17:30:29.632000+00:00,d8593518ef4cad89260a1c52f98b8690,381cbdad32efa51915ea59061813ced46bc0d5d813f263f7cdce5f0b35b5e26d,48851.0,conda-forge/yt-napari/0.2.1/noarch/yt-napari-0.2.1-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/yt-napari/0.2.1/noarch/yt-napari-0.2.1-pyhd8ed1ab_0.conda,conda,0.2.1,conda-forge,['main'],conda,noarch/yt-napari-0.3.0-pyhd8ed1ab_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui >=0.4.0', 'napari >=0.4.13', 'numpy', 'packaging', 'pydantic', 'python >=3.8', 'qtpy', 'unyt', 'yt >=4.0.1']",noarch,1702078287063.0,None-any-None,pyhd8ed1ab_0,2023-12-08 23:33:28.955000+00:00,eb7adbc8d0e02ca33fc7449e9cf051be,15e2a1a9fe3a0a6aaf1ee4ced2cdd873b9d4bd3de2785558de7aa5aa1772de56,52290.0,conda-forge/yt-napari/0.3.0/noarch/yt-napari-0.3.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/yt-napari/0.3.0/noarch/yt-napari-0.3.0-pyhd8ed1ab_0.conda,conda,0.3.0,conda-forge,['main'],conda,noarch/yt-napari-0.5.0-pyhd8ed1ab_0.conda,None-any-None,False,noarch,pyhd8ed1ab_0,0.0,"['magicgui >=0.6.1', 'napari >=0.4.19', 'numpy', 'packaging', 'pydantic', 'python >=3.8', 'qtpy', 'unyt', 'yt >=4.0.1']",BSD-3-Clause,python,1718130856542.0,2024-06-11 18:36:02.348000+00:00,d143cf1e87257f3ad507ed3430101810,0e389af4bf81a62b41ee4fa4fc1ca84d7ef048ba28d927bf0b7267fed0c5af8b,53935.0,conda-forge/yt-napari/0.5.0/noarch/yt-napari-0.5.0-pyhd8ed1ab_0.conda,//api.anaconda.org/download/conda-forge/yt-napari/0.5.0/noarch/yt-napari-0.5.0-pyhd8ed1ab_0.conda,conda,0.5.0,conda-forge,['main'],,yt-napari.reader_widget,Read in a selection of data from yt,yt_napari._widget_reader:ReaderWidget,yt-napari.timeseries_widget,Read 2D selections from yt timeseries,yt_napari._widget_reader:TimeSeriesReader,yt-napari.metadata_widget,Inspect the metadata for a yt dataset,yt_napari._widget_matadata:MetadataWidget,yt-napari.reader_widget,yt Reader,False,yt-napari.timeseries_widget,yt Time Series Reader,False,yt-napari.metadata_widget,yt Metadata Explorer,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +472,zarpaint,0.4.0,zarpaint,Paint segmentations directly to on-disk/remote zarr arrays,Abigail S McGovern and Juan Nunez-Iglesias,BSD-3,https://github.com/jni/zarpaint,65593cfc41f0958ec6b9319b,['conda'],,https://pypi.org/project/zarpaint,True,,,conda-forge,conda-forge,,"A community-led collection of recipes, build infrastructure, and distributions for the conda package manager.",2015-04-11 10:15:08.727000+00:00,org,conda-forge/zarpaint,http://api.anaconda.org/packages/conda-forge/zarpaint,http://anaconda.org/conda-forge/zarpaint,"['0.3.1', '0.4.0']",0.4.0,0.4.0,['noarch'],11.0,https://github.com/jni/zarpaint,"['pyh9208f05_0', 'pyh9208f05_1']",0.3.1,conda-forge/zarpaint/0.3.1,1.0,0.0,2023-11-18 22:38:49.636000+00:00,2024-12-04 08:23:54.121000+00:00,conda,noarch/zarpaint-0.3.1-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari >=0.4.18', 'numpy', 'python >=3.7', 'pyyaml', 'qtpy', 'scikit-image', 'scipy', 'toolz', 'zarr']",noarch,1700347004204.0,None-any-None,pyh9208f05_0,2023-11-18 22:38:50.049000+00:00,f3bc8678c34763059a897a9a9d36ae49,b4ec9da7d40543e97c5b14ee317ff546e39764db86c9921de318cbb163f0d33c,20741.0,conda-forge/zarpaint/0.3.1/noarch/zarpaint-0.3.1-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/zarpaint/0.3.1/noarch/zarpaint-0.3.1-pyh9208f05_0.conda,conda,0.3.1,conda-forge,['main'],public,,0.2.0,zarpaint.add_points_3d_with_alt_click,Add Points With Alt-Click in 3D…,zarpaint:add_points_3d_with_alt_click,zarpaint.get_reader,['*.zarr'],True,2.1,zarpaint,0.4.0,,Paint segmentations directly to on-disk/remote zarr arrays,"# zarpaint [![License](https://img.shields.io/pypi/l/zarpaint.svg?color=green)](https://github.com/jni/zarpaint/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/zarpaint.svg?color=green)](https://pypi.org/project/zarpaint) @@ -47885,4 +50254,4 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -",text/markdown,https://github.com/jni/zarpaint,Abigail S McGovern and Juan Nunez-Iglesias,juan.nunez-iglesias@monash.edu,BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['magicgui', 'napari >=0.4.19', 'numpy', 'pyyaml', 'qtpy', 'scipy', 'scikit-image >=0.21', 'toolz', 'zarr <3,>=2.11', ""tensorstore ; extra == 'all'"", ""coverage ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari[pyqt5] ; extra == 'testing'""]",>=3.7,,"['all', 'testing']",False,0.4.0,conda-forge/zarpaint/0.4.0,,,,,conda,noarch/zarpaint-0.4.0-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari >=0.4.19', 'numpy', 'python >=3.9', 'pyyaml', 'qtpy', 'scikit-image >=0.21', 'scipy', 'toolz', 'zarr >=2.11,<3']",pyh9208f05_0,1719537814304.0,None-any-None,noarch,2024-06-28 01:25:09.721000+00:00,1a335ccc572e72511ba2e59480ad85cf,d04faa848153fca350e644fb249601306017984c86b5a11c893402c61f1ec879,20910.0,conda-forge/zarpaint/0.4.0/noarch/zarpaint-0.4.0-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/zarpaint/0.4.0/noarch/zarpaint-0.4.0-pyh9208f05_0.conda,conda,0.4.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,zarpaint.set_axis_labels,Set Axis Labels…,zarpaint:set_axis_labels,zarpaint.DimsSorter,Reorder Dimensions…,zarpaint:DimsSorter,zarpaint.create_labels,Create Labels Layer…,zarpaint:create_labels,zarpaint.add_points_3d_with_alt_click,Add Points With Alt-Click in 3D,False,zarpaint.set_axis_labels,Set Axis Labels,False,zarpaint.DimsSorter,Reorder Dims,False,zarpaint.create_labels,Create Labels Layer,False,zarpaint.watershed_split,Split With Watershed…,zarpaint:watershed_split,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,zarpaint.get_reader,Get Reader,zarpaint:zarr_tensorstore,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,zarpaint.copy_data,Copy Data…,zarpaint:copy_data,,,,,,,,,,,,,,,,,zarpaint.watershed_split,Split With Watershed,False,zarpaint.copy_data,Copy Data,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +",text/markdown,https://github.com/jni/zarpaint,Abigail S McGovern and Juan Nunez-Iglesias,juan.nunez-iglesias@monash.edu,BSD-3,"['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['magicgui', 'napari >=0.4.19', 'numpy', 'pyyaml', 'qtpy', 'scipy', 'scikit-image >=0.21', 'toolz', 'zarr <3,>=2.11', ""tensorstore ; extra == 'all'"", ""coverage ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari[pyqt5] ; extra == 'testing'""]",>=3.7,,"['all', 'testing']",False,0.4.0,conda-forge/zarpaint/0.4.0,,,,,conda,noarch/zarpaint-0.4.0-pyh9208f05_0.conda,0.0,BSD-3-Clause,False,python,"['magicgui', 'napari >=0.4.19', 'numpy', 'python >=3.9', 'pyyaml', 'qtpy', 'scikit-image >=0.21', 'scipy', 'toolz', 'zarr >=2.11,<3']",pyh9208f05_0,1719537814304.0,None-any-None,noarch,2024-06-28 01:25:09.721000+00:00,1a335ccc572e72511ba2e59480ad85cf,d04faa848153fca350e644fb249601306017984c86b5a11c893402c61f1ec879,20910.0,conda-forge/zarpaint/0.4.0/noarch/zarpaint-0.4.0-pyh9208f05_0.conda,//api.anaconda.org/download/conda-forge/zarpaint/0.4.0/noarch/zarpaint-0.4.0-pyh9208f05_0.conda,conda,0.4.0,conda-forge,['main'],conda,noarch/zarpaint-0.4.0-pyh9208f05_1.conda,1.0,BSD-3-Clause,False,python,"['magicgui', 'napari >=0.4.19', 'numpy', 'python >=3.11', 'pyyaml', 'qtpy', 'scikit-image >=0.21', 'scipy', 'toolz', 'zarr >=2.11,<3']",noarch,1733300523551.0,None-any-None,pyh9208f05_1,2024-12-04 08:23:47.033000+00:00,102f8e4b8ee55ccf23c0a9a04ae6322b,48717b22ac460e0d93b72e06a1c9fbf00513a4ddaa64c70c7fc34dae117d5c5e,20875.0,conda-forge/zarpaint/0.4.0/noarch/zarpaint-0.4.0-pyh9208f05_1.conda,//api.anaconda.org/download/conda-forge/zarpaint/0.4.0/noarch/zarpaint-0.4.0-pyh9208f05_1.conda,conda,0.4.0,conda-forge,['main'],,,,,,,,,,,,,,,,,,,,,,,zarpaint.set_axis_labels,Set Axis Labels…,zarpaint:set_axis_labels,zarpaint.DimsSorter,Reorder Dimensions…,zarpaint:DimsSorter,zarpaint.create_labels,Create Labels Layer…,zarpaint:create_labels,zarpaint.add_points_3d_with_alt_click,Add Points With Alt-Click in 3D,False,zarpaint.set_axis_labels,Set Axis Labels,False,zarpaint.DimsSorter,Reorder Dims,False,zarpaint.create_labels,Create Labels Layer,False,zarpaint.watershed_split,Split With Watershed…,zarpaint:watershed_split,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,zarpaint.get_reader,Get Reader,zarpaint:zarr_tensorstore,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,zarpaint.copy_data,Copy Data…,zarpaint:copy_data,,,,,,,,,,,,,,zarpaint.watershed_split,Split With Watershed,False,zarpaint.copy_data,Copy Data,False,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, diff --git a/data/final_plugins.csv b/data/final_plugins.csv index 01a7545..4337325 100644 --- a/data/final_plugins.csv +++ b/data/final_plugins.csv @@ -140,7 +140,7 @@ Many plugins may be used in the course of published (or publishable) research, a during conference talks and other public facing events. If you'd like to be cited in a particular format, or have a DOI you'd like used, you should provide that information here. ","['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']",,,,affinder.start_affinder,,,,,https://pypi.org/project/affinder,https://github.com/jni/affinder, -2,allencell-segmenter-ml,0.1.16rc1,,,allencell-segmenter-ml,"Brian Kim, Chris Hughes, Daniel Saelid","Brian Kim , Chris Hughes , Daniel Saelid ","Allen Institute Software License – This software license is the 2-clause BSD license plus clause a third clause that +2,allencell-segmenter-ml,0.1.17,,,allencell-segmenter-ml,,,"Allen Institute Software License – This software license is the 2-clause BSD license plus clause a third clause that prohibits redistribution for commercial purposes without further permission. Copyright © 2024. Allen Institute. All rights reserved. @@ -168,11 +168,16 @@ INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIM GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. -",,A plugin to leverage ML segmentation in napari,"<3.11,>=3.10","['napari >=0.4.18', 'npe2 >=0.6.2', 'numpy', 'hydra-core ==1.3.2', 'bioio', 'tifffile >=2023.4.12', 'watchdog', 'cyto-dl ==0.1.8', 'scikit-image !=0.23.0', ""black >=24.2.0 ; extra == 'dev'"", ""coverage >=7.2.2 ; extra == 'dev'"", ""flake8 >=6.0.0 ; extra == 'dev'"", ""pytest <8.0.0,>=7.2.2 ; extra == 'dev'"", ""pytest-qt >=3.3.0 ; extra == 'dev'"", ""pytest-cov >=2.6.1 ; extra == 'dev'"", ""pyqt5 >=5.15.9 ; extra == 'dev'"", ""bumpver >=2023.1129 ; extra == 'dev'"", ""build >=1.0.3 ; extra == 'dev'"", ""twine >=5.0.0 ; extra == 'dev'"", ""responses ; extra == 'dev'"", ""pytest <8.0.0 ; extra == 'test_lint'"", ""pytest-cov ; extra == 'test_lint'"", ""pytest-qt ; extra == 'test_lint'"", ""qtpy ; extra == 'test_lint'"", ""pyqt5 ; extra == 'test_lint'"", ""black >=24.2.0 ; extra == 'test_lint'"", ""responses ; extra == 'test_lint'"", 'pytest-xvfb ; (sys_platform == ""linux"") and extra == \'test_lint\'']","# Allencell-segmenter-ml +",,A plugin to leverage ML segmentation in napari,"<3.11,>=3.9","['napari >=0.4.18', 'npe2 >=0.6.2', 'numpy', 'hydra-core ==1.3.2', 'bioio', 'tifffile >=2023.4.12', 'watchdog', 'cyto-dl ==0.1.8', 'scikit-image !=0.23.0', ""black >=24.2.0 ; extra == 'dev'"", ""coverage >=7.2.2 ; extra == 'dev'"", ""flake8 >=6.0.0 ; extra == 'dev'"", ""pytest <8.0.0,>=7.2.2 ; extra == 'dev'"", ""pytest-qt >=3.3.0 ; extra == 'dev'"", ""pytest-cov >=2.6.1 ; extra == 'dev'"", ""pyqt5 >=5.15.9 ; extra == 'dev'"", ""bumpver >=2023.1129 ; extra == 'dev'"", ""build >=1.0.3 ; extra == 'dev'"", ""twine >=5.0.0 ; extra == 'dev'"", ""responses ; extra == 'dev'"", ""pytest <8.0.0 ; extra == 'test_lint'"", ""pytest-cov ; extra == 'test_lint'"", ""pytest-qt ; extra == 'test_lint'"", ""qtpy ; extra == 'test_lint'"", ""pyqt5 ; extra == 'test_lint'"", ""black >=24.2.0 ; extra == 'test_lint'"", ""responses ; extra == 'test_lint'"", 'pytest-xvfb ; (sys_platform == ""linux"") and extra == \'test_lint\'']","# Allencell-segmenter-ml [![Test and lint](https://github.com/AllenCell/allencell-segmenter-ml/actions/workflows/test_lint.yaml/badge.svg?branch=main&event=push)](https://github.com/AllenCell/allencell-segmenter-ml/actions/workflows/test_lint.yaml) - +## This version is a release candidate currently undergoing testing and development. +Our team is actively working on this plugin and will have an *official release* with additional features very soon. + +Please keep an eye on this page for updates. + +In the meantime, [please report any bugs here.](https://github.com/AllenCell/allencell-segmenter-ml/issues/new/choose) ## What is Allen Cell Segmenter ML @@ -181,11 +186,11 @@ A deep learning-based segmentation Napari plugin to curate datasets, train your ## 📰 News - - **[2024.09.24]** :tada: Initial release of the plugin and Megaseg models! + - **[2024.09.24]** 🎉 Initial dev release of the plugin and Megaseg models! -## :hammer_and_wrench: Installation +## 🛠️ Installation ### System Requirements @@ -269,7 +274,7 @@ To install the latest version of the plugin: pip install allencell-segmenter-ml ``` -### :rotating_light: Post-Installation :rotating_light: +### 🚨 Post-Installation 🚨 > :memo: __NOTE:__ This section is specifically for users with at least one NVIDIA GPU installed on their machine. Not sure if you have an NVIDIA GPU? You can check by running `nvidia-smi` as shown [below](#step-1-checking-cuda-version). If you __do not__ have an NVIDIA GPU system, you can skip this section. @@ -415,7 +420,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ [PyTorch]: https://pytorch.org/get-started/locally/ -","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Science/Research', 'License :: Other/Proprietary License', 'License :: Free for non-commercial use', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Homepage, https://github.com/AllenCell/allencell-ml-segmenter', 'Bug Tracker, https://github.com/AllenCell/allencell-ml-segmenter/issues', 'Documentation, https://github.com/AllenCell/allencell-ml-segmenter#README.md', 'User Support, https://github.com/AllenCell/allencell-ml-segmenter/issues']",,,allencell-segmenter-ml.make_qwidget,,,,,https://pypi.org/project/allencell-segmenter-ml,, +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Science/Research', 'License :: Other/Proprietary License', 'License :: Free for non-commercial use', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Homepage, https://github.com/AllenCell/allencell-ml-segmenter', 'Bug Tracker, https://github.com/AllenCell/allencell-ml-segmenter/issues', 'Documentation, https://github.com/AllenCell/allencell-ml-segmenter#README.md', 'User Support, https://github.com/AllenCell/allencell-ml-segmenter/issues']",,,allencell-segmenter-ml.make_qwidget,,,,,https://pypi.org/project/allencell-segmenter-ml,, 3,AlveolEye,0.1.2,,,AlveolEye,Joseph Hirsh,josephhirsh9@gmail.com,MIT,,Reads lung slides with AI-driven and classical methods,>=3.8,"['numpy', 'magicgui', 'qtpy', ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""qtpy ; extra == 'testing'""]"," +## What Is Brainways? + + +Brainways is an AI-based tool for automated registration, quantification and generation of brain-wide activity networks based on fluorescence in coronal slices. + +![Brainways UI](docs/assets/brainways-ui.gif) + + +## Why Brainways? + + +Coronal slice registration, cell quantification and whole-brain contrast analysis between experimental conditions should be made easily accessible from a single software, without requiring programming experience. +Customization should be made easy by having a highly flexible pythonic backend. + +## Getting Started + +To install and run brainways, run the following in your python environment: + +```bash +pip install brainways +brainways ui +``` + +Follow our [getting started guide](https://brainways.readthedocs.io/en/latest/getting_started/) for more details. + +## How it works + +Brainways allows users to register, quantify and provide statistical contrast analysis by following several simple steps: + +1. Rigid registration of coronal slices to a 3D atlas. +1. Non-rigid registration of coronal slices to a 3D atlas, to account for individual difference and imperfections in acquisition procedure. +1. Cell detection (using [StarDist](https://github.com/stardist/stardist)). +1. Quantification of cell counts per brain region. +1. Statistical analysis: + * ANOVA contrast analysis. + * PLS (Partial Least Square) analysis. + * Network graph creation. + + + +## Architecture + +Brainways is implemented as three modules. `brainways.ui` contains the GUI implementation as a [napari](https://napari.org/stable/) plugin. `brainways.ui` is using `brainways` as its backend. All of the functionality is implemented in the brainways package. This separation was done to guarantee that brainways is a GUI-agnostic software, and can be fully accessed and manipulated through python code to allow custom complex usage scenarios. The code that was used to train, evaluate and run the automatic registration model resides in `brainways-reg-model`. + +## Development Status + +Brainways is being actively developed by Ben Kantor of Bartal lab, Tel Aviv University, Israel. Our releases can be found [here](https://github.com/bkntr/brainways/releases). + +## Citation + +If you use brainways, please cite [Kantor and Bartal (2023)](https://doi.org/10.1101/2023.05.25.542252): + + @article{kantor2023brainways, + title={Brainways: An Open-Source AI-based Software For Registration and Analysis of Fluorescent Markers on Coronal Brain Slices}, + author={Kantor, Ben and Ben-Ami Bartal, Inbal}, + journal={bioRxiv}, + pages={2023--05}, + year={2023}, + publisher={Cold Spring Harbor Laboratory} + } + +## License + +Distributed under the terms of the [GNU GPL v3.0] license, +""brainways"" is free and open source software + +## Issues + +If you encounter any problems, please [file an issue] along with a detailed description. + +[napari]: https://github.com/napari/napari +[Cookiecutter]: https://github.com/audreyr/cookiecutter +[@napari]: https://github.com/napari +[MIT]: http://opensource.org/licenses/MIT +[BSD-3]: http://opensource.org/licenses/BSD-3-Clause +[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt +[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt +[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0 +[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt +[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin + +[file an issue]: https://github.com/bkntr/brainways/issues + +[napari]: https://github.com/napari/napari +[tox]: https://tox.readthedocs.io/en/latest/ +[pip]: https://pypi.org/project/pip/ +[PyPI]: https://pypi.org/ +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Programming Language :: Python :: Implementation :: CPython', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/bkntr/brainways/issues', 'Documentation, https://github.com/bkntr/brainways#README.md', 'Source Code, https://github.com/bkntr/brainways', 'User Support, https://github.com/bkntr/brainways/issues']",brainways.read_bwp,,brainways.make_qwidget,brainways.load_sample_project,['*.bwp'],,,https://pypi.org/project/brainways,, +19,btrack,0.6.5,2022-04-01,2023-06-18,btrack,Alan R. Lowe,"""Alan R. Lowe"" ",MIT,https://github.com/quantumjot/BayesianTracker,A framework for Bayesian multi-object tracking,>=3.9,"['cvxopt >=1.3.1', 'h5py >=2.10.0', 'numpy >=1.17.3', 'pandas >=2.0.3', 'pooch >=1.0.0', 'pydantic <2', 'scikit-image >=0.16.2', 'scipy >=1.3.1', 'tqdm >=4.65.0', ""black ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""ruff ; extra == 'dev'"", ""numpydoc ; extra == 'docs'"", ""pytz ; extra == 'docs'"", ""sphinx ; extra == 'docs'"", ""sphinx-automodapi ; extra == 'docs'"", ""sphinx-panels ; extra == 'docs'"", ""sphinx-rtd-theme ; extra == 'docs'"", ""magicgui >=0.5.0 ; extra == 'napari'"", ""napari-plugin-engine >=0.1.4 ; extra == 'napari'"", ""napari >=0.4.16 ; extra == 'napari'"", ""qtpy ; extra == 'napari'""]","[![PyPI](https://img.shields.io/pypi/v/btrack)](https://pypi.org/project/btrack) [![Downloads](https://static.pepy.tech/badge/btrack/month)](https://pepy.tech/project/btrack) [![Black](https://img.shields.io/badge/code%20style-black-000000.svg)](https://github.com/psf/black) [![Tests](https://github.com/quantumjot/btrack/actions/workflows/test.yml/badge.svg)](https://github.com/quantumjot/btrack/actions/workflows/test.yml) @@ -1746,7 +1903,7 @@ Bove A, Gradeci D, Fujita Y, Banerjee S, Charras G and Lowe AR. } ``` ","['Framework :: napari', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: C++', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Topic :: Scientific/Engineering :: Image Recognition', 'Topic :: Scientific/Engineering :: Visualization']","['bugtracker, https://github.com/quantumjot/btrack/issues', 'documentation, https://btrack.readthedocs.io', 'homepage, https://github.com/quantumjot/btrack', 'usersupport, https://github.com/quantumjot/btrack/discussions']",btrack.read_btrack,btrack.write_hdf,btrack.track,,"['*.h5', '*.hdf', '*.hdf5']","['.h5', '.hdf', '.hdf5']",,https://pypi.org/project/btrack,https://github.com/quantumjot/BayesianTracker, -18,cell-AAP,0.0.7,,,cell-AAP,Anish Virdi,,,,,>=3.8,"['napari[all] >=0.4.19', 'numpy >=1.26.4', 'opencv-python >=4.9.0', 'tifffile >=2024.2.12', 'torch >=2.3.0', 'torchvision >=0.18.0', 'scikit-image >=0.22.0', 'qtpy >=2.4.1', 'pillow >=10.3.0', 'scipy >=1.3.0', 'timm >=1.0.7']","# cellular-Automated Annotation Pipeline +20,cell-AAP,0.0.8,,,cell-AAP,Anish Virdi,,,,,"<3.13,>=3.11","['napari[all]>=0.4.19', 'numpy==1.26.4', 'opencv-python>=4.9.0', 'tifffile>=2024.2.12', 'torch>=2.3.1', 'torchvision>=0.18.1', 'scikit-image>=0.22.0', 'qtpy>=2.4.1', 'pillow>=10.3.0', 'scipy>=1.3.0', 'timm>=1.0.7', 'pandas>=2.2.2', 'superqt>=0.6.3', 'btrack>=0.6.5', 'seaborn>=0.13.2', 'openpyxl>=3.1.4', 'joblib>=1.0', 'scikit-learn>=0.22', 'cython<3,>=0.27']","# cellular-Automated Annotation Pipeline Utilities for the semi-automated generation of instance segmentation annotations to be used for neural network training. Utilities are built ontop of [UMAP](https://github.com/lmcinnes/umap), [HDBSCAN](https://arxiv.org/abs/1911.02282) and a finetuned encoder version of FAIR's [Segment Anything Model](https://github.com/facebookresearch/segment-anything/tree/main?tab=readme-ov-file) developed by Computational Cell Analytics for the project [micro-sam](https://github.com/computational-cell-analytics/micro-sam/tree/master/micro_sam/sam_annotator). In addition to providing utilies for annotation building, we train a network, FAIR's [detectron2](https://github.com/facebookresearch/detectron2) to 1. Demonstrate the efficacy of our utilities. 2. Be used for microscopy annotation of supported cell lines @@ -1833,12 +1990,12 @@ Note: Interclass double predictions are often early prophase cells that the netw ","['Framework :: napari', 'Programming Language :: Python :: 3']",,,,cell-AAP.run,,,,,https://pypi.org/project/cell-AAP,, -19,cellcanvas,0.0.1,,,cellcanvas,Kyle Harrington,czii@kyleharrington.com,MIT,,A tool for painting in cellular architecture,>=3.8,"['numpy <2.0.0', 'magicgui >=0.8.1', 'mrcfile', 'qtpy >=2.4.1', 'scikit-image >=0.22.0', 'toolz >=0.12.0', 'scikit-learn >=1.3.2', 'pyclesperanto-prototype', 'pymeshfix', 'psygnal >=0.9.5', 'superqt >=0.6.1', 'surforama', 'starfile', 'zarr >=2.16.1', 'xgboost >=2', 'matplotlib >=3.8.2', ""tox ; extra == 'dev'"", ""pytest ; extra == 'dev'"", ""pytest-cov ; extra == 'dev'"", ""pytest-qt ; extra == 'dev'"", ""napari ; extra == 'dev'"", ""pyqt5 ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# cellcanvas +21,cellcanvas,0.0.1,,,cellcanvas,Kyle Harrington,czii@kyleharrington.com,MIT,,A tool for painting in cellular architecture,>=3.8,"['numpy <2.0.0', 'magicgui >=0.8.1', 'mrcfile', 'qtpy >=2.4.1', 'scikit-image >=0.22.0', 'toolz >=0.12.0', 'scikit-learn >=1.3.2', 'pyclesperanto-prototype', 'pymeshfix', 'psygnal >=0.9.5', 'superqt >=0.6.1', 'surforama', 'starfile', 'zarr >=2.16.1', 'xgboost >=2', 'matplotlib >=3.8.2', ""tox ; extra == 'dev'"", ""pytest ; extra == 'dev'"", ""pytest-cov ; extra == 'dev'"", ""pytest-qt ; extra == 'dev'"", ""napari ; extra == 'dev'"", ""pyqt5 ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# cellcanvas A tool to support painting in cellular architecture ![cellcanvas_screenshot](cover.png) ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/cellcanvas/cellcanvas/issues', 'Documentation, https://github.com/cellcanvas/cellcanvas#README.md', 'Source Code, https://github.com/cellcanvas/cellcanvas', 'User Support, https://github.com/cellcanvas/cellcanvas/issues']",,,cellcanvas.make_qwidget,,,,,https://pypi.org/project/cellcanvas,, -20,cellfinder,1.3.2,,,cellfinder,"Adam Tyson, Christian Niedworok, Charly Rousseau","""Adam Tyson, Christian Niedworok, Charly Rousseau"" ",BSD-3-Clause,,Automated 3D cell detection in large microscopy images,>=3.10,"['brainglobe-utils>=0.5.0', 'brainglobe-napari-io>=0.3.4', 'dask[array]', 'fancylog>=0.0.7', 'natsort', 'numba', 'numpy<2', 'scikit-image', 'scikit-learn', 'keras>=3.0.0', 'torch>=2.1.0', 'tifffile', 'tqdm', 'black; extra == ""dev""', 'pre-commit; extra == ""dev""', 'pyinstrument; extra == ""dev""', 'pytest-cov; extra == ""dev""', 'pytest-mock; extra == ""dev""', 'pytest-qt; extra == ""dev""', 'pytest-timeout; extra == ""dev""', 'pytest; extra == ""dev""', 'tox; extra == ""dev""', 'brainglobe-napari-io; extra == ""napari""', 'magicgui; extra == ""napari""', 'napari-ndtiffs; extra == ""napari""', 'napari-plugin-engine>=0.1.4; extra == ""napari""', 'napari[pyqt5]; extra == ""napari""', 'pooch>=1; extra == ""napari""', 'qtpy; extra == ""napari""']","[![Python Version](https://img.shields.io/pypi/pyversions/cellfinder.svg)](https://pypi.org/project/cellfinder) +22,cellfinder,1.3.3,,,cellfinder,"Adam Tyson, Christian Niedworok, Charly Rousseau","""Adam Tyson, Christian Niedworok, Charly Rousseau"" ",BSD-3-Clause,,Automated 3D cell detection in large microscopy images,>=3.10,"['brainglobe-utils>=0.5.0', 'brainglobe-napari-io>=0.3.4', 'dask[array]', 'fancylog>=0.0.7', 'natsort', 'numba', 'numpy', 'scikit-image', 'scikit-learn', 'keras==3.5.0', 'torch>=2.1.0', 'tifffile', 'tqdm', 'black; extra == ""dev""', 'pre-commit; extra == ""dev""', 'pyinstrument; extra == ""dev""', 'pytest-cov; extra == ""dev""', 'pytest-mock; extra == ""dev""', 'pytest-qt; extra == ""dev""', 'pytest-timeout; extra == ""dev""', 'pytest; extra == ""dev""', 'tox; extra == ""dev""', 'brainglobe-napari-io; extra == ""napari""', 'magicgui; extra == ""napari""', 'napari-ndtiffs; extra == ""napari""', 'napari-plugin-engine>=0.1.4; extra == ""napari""', 'napari[pyqt5]; extra == ""napari""', 'pooch>=1; extra == ""napari""', 'qtpy; extra == ""napari""']","[![Python Version](https://img.shields.io/pypi/pyversions/cellfinder.svg)](https://pypi.org/project/cellfinder) [![PyPI](https://img.shields.io/pypi/v/cellfinder.svg)](https://pypi.org/project/cellfinder) [![Downloads](https://pepy.tech/badge/cellfinder)](https://pepy.tech/project/cellfinder) [![Wheel](https://img.shields.io/pypi/wheel/cellfinder.svg)](https://pypi.org/project/cellfinder) @@ -1896,7 +2053,157 @@ If you find this package useful, and use it in your research, please cite the fo [let us know](https://brainglobe.info/contact.html), and we'd be happy to promote your paper/talk etc.** ","['Development Status :: 4 - Beta', 'Framework :: napari', 'Intended Audience :: Developers', 'Intended Audience :: Science/Research', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Recognition']","['Homepage, https://brainglobe.info/documentation/cellfinder/index.html', 'Source Code, https://github.com/brainglobe/cellfinder', 'Bug Tracker, https://github.com/brainglobe/cellfinder/issues', 'Documentation, https://brainglobe.info/documentation/cellfinder/index.html', 'User Support, https://forum.image.sc/tag/brainglobe']",,,cellfinder.napari.detect_widget,cellfinder.napari.SampleData,,,,https://pypi.org/project/cellfinder,, -21,cellpose-napari,0.2.0,2022-02-14,2024-09-05,cellpose-napari,Carsen Stringer,stringerc@janelia.hhmi.org,BSD-3,https://github.com/Mouseland/cellpose-napari,a generalist algorithm for anatomical segmentation,>=3.7,"['napari', 'napari-plugin-engine>=0.1.4', 'cellpose>0.6.3', 'imagecodecs', 'sphinx>=3.0; extra == ""docs""', 'sphinxcontrib-apidoc; extra == ""docs""', 'sphinx-rtd-theme; extra == ""docs""', 'sphinx-prompt; extra == ""docs""', 'sphinx-autodoc-typehints; extra == ""docs""', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# cellpose-napari +23,CellPose Counter,0.1.3,,,cellpose-counter,Nicolas Buitrago,nsb5@rice.edu," +Copyright (c) 2024, Szablowski Lab +All rights reserved. + +Redistribution and use in source and binary forms, with or without +modification, are permitted provided that the following conditions are met: + +* Redistributions of source code must retain the above copyright notice, this + list of conditions and the following disclaimer. + +* Redistributions in binary form must reproduce the above copyright notice, + this list of conditions and the following disclaimer in the documentation + and/or other materials provided with the distribution. + +* Neither the name of copyright holder nor the names of its + contributors may be used to endorse or promote products derived from + this software without specific prior written permission. + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ""AS IS"" +AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE +IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE +DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE +FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL +DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR +SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER +CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, +OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE +OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. +",,Cell/nuclei counter using cellpose models,>=3.10,"['numpy', 'magicgui', 'qtpy', 'scikit-image', 'napari[all]>=0.5.4', 'cellpose>=3.1.0', 'accelerate>=1.1.1', 'napari-czifile2>=0.2.7', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# cellpose-counter + +[![License BSD-3](https://img.shields.io/pypi/l/cellpose-counter.svg?color=green)](https://github.com/szablowskilab/cellpose-counter/raw/main/LICENSE) +[![PyPI](https://img.shields.io/pypi/v/cellpose-counter.svg?color=green)](https://pypi.org/project/cellpose-counter) +[![Python Version](https://img.shields.io/pypi/pyversions/cellpose-counter.svg?color=green)](https://python.org) +[![tests](https://github.com/szablowskilab/cellpose-counter/workflows/tests/badge.svg)](https://github.com/szablowskilab/cellpose-counter/actions) +[![codecov](https://codecov.io/gh/szablowskilab/cellpose-counter/branch/main/graph/badge.svg)](https://codecov.io/gh/szablowskilab/cellpose-counter) +[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/cellpose-counter)](https://napari-hub.org/plugins/cellpose-counter) + +A Napari plugin for cell/nuclei counting from a region or interest using +cellpose models. + +---------------------------------- + +## Installation + +Option 1: Install in Napari directly under the plugins tab and select +cellpose-counter. + +Option 2: via [pip](https://pip.pypa.io/en/stable/) (or pip alternatives like +[uv](https://docs.astral.sh/uv/)): + +Below is a minimally working example of setting up a new virtual environment and +installing the counter module with uv on Unix based systems. + +```bash +uv venv # create virtual environment in .venv +source .venv/bin/activate + +uv pip install ""napari[all]"" cellpose-counter +``` + +## GPU Acceleration + +To enable GPU acceleration, you will need a CUDA capable GPU along with the +[CUDA toolkit](https://developer.nvidia.com/cuda-toolkit) and [cudNN library](https://developer.nvidia.com/cudnn). + +For instructions on installing cuda toolkit and cudNN, see: + +1. [cuda toolkit installation for Linux](https://docs.nvidia.com/cuda/cuda-installation-guide-linux/index.html#fedora) +1. [cudNN installation for Linux](https://docs.nvidia.com/deeplearning/cudnn/latest/installation/linux.html) + +Once these are installed, update the pytorch package by first uninstalling torch +(if already instsalled). + +```bash +uv pip uninstall torch +``` + +Then install a torch version that is compatible with your CUDA version. For example, + +```bash +uv pip install torch --index-url https://download.pytorch.org/whl/cu118 +``` + +After installation, you can verify in an interactive python console with: + +```python3 +import torch +torch.cuda.is_available() +``` + +## Usage + +To open Napari with the cellpose counter loaded, run `napari -w cellpose-counter`. + +A dock widget will be open on the right side of the Napari interface. There +you can view options for restoring images (using the cellpose denoise module), +and counting cells/nuclei in a region of interest (ROI). + +A few important notes: + +1. Images in TIFF or CZI file formats may be used. +1. Images must be grayscale or single channel. RGB images may be loaded, but +should be split. You can do this by right clicking on the image and select +`split rgb` or `split stack`. +1. ROIs can be drawn using the shape layer tools. Only a single ROI can be drawn +per shape layer (otherwise only the first draw ROI will be used). +1. ROIs should be square or rectangular. You can draw ROIs as polygons or other +shapes, but a bounding box will be made from these shapes anyway. +1. For long running processes such as image restoration or counting, it may seem +like Napari is not doing anything. Notifications are shown in the viewer to +display import information and a small activity indicator can be seen in the +bottom right hand corner. If this indicator is spinning, then work is being done +even if it doesn't look like it. + +## Updating + +1. via Napari plugin manager. Select cellpose-counter plugin and update button. + +1. via pip (or uv, ..., etc.) + +```bash +uv pip install cellpose-counter --upgrade +``` + +## Contributing + +All contributions are welcome. Please submit an issue for feedback or bugs. + +## Citations + +This plugin is built on top of the Cellpose segmentation and denoising models. +If you use this plugin, please cite the following paper: + +```bitex +@article{stringer2021cellpose, +title={Cellpose: a generalist algorithm for cellular segmentation}, +author={Stringer, Carsen and Wang, Tim and Michaelos, Michalis and Pachitariu, Marius}, +journal={Nature Methods}, +volume={18}, +number={1}, +pages={100--106}, +year={2021}, +publisher={Nature Publishing Group} +} +``` + +## License + +[BSD-3](./LICENSE) +","['Development Status :: 3 - Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']",,,,cellpose-counter.make_counter_widget,,,,,https://pypi.org/project/cellpose-counter,, +24,cellpose-napari,0.2.0,2022-02-14,2024-09-05,cellpose-napari,Carsen Stringer,stringerc@janelia.hhmi.org,BSD-3,https://github.com/Mouseland/cellpose-napari,a generalist algorithm for anatomical segmentation,>=3.7,"['napari', 'napari-plugin-engine>=0.1.4', 'cellpose>0.6.3', 'imagecodecs', 'sphinx>=3.0; extra == ""docs""', 'sphinxcontrib-apidoc; extra == ""docs""', 'sphinx-rtd-theme; extra == ""docs""', 'sphinx-prompt; extra == ""docs""', 'sphinx-autodoc-typehints; extra == ""docs""', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# cellpose-napari [![Documentation Status](https://readthedocs.org/projects/cellpose-napari/badge/?version=latest)](https://cellpose-napari.readthedocs.io/en/latest/?badge=latest) [![tests](https://github.com/mouseland/cellpose-napari/workflows/tests/badge.svg)](https://github.com/mouseland/cellpose-napari/actions) @@ -2036,7 +2343,172 @@ cellpose relies on the following excellent packages (which are automatically ins [BSD-3]: http://opensource.org/licenses/BSD-3-Clause [cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin ","['Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License', 'Framework :: napari']",,,,cellpose-napari.widget_wrapper,cellpose-napari.data.rgb_3D,,,,https://pypi.org/project/cellpose-napari,https://github.com/Mouseland/cellpose-napari, -22,cryaleconcho,0.0.7,,,cryaleconcho,Ryan Conrad,conradrw@nih.gov,BSD-3-Clause,,Napari plugin of algorithms for Panoptic Segmentation of organelles in EM,>=3.7,"['napari >=0.4.16', 'numpy ==1.22', 'napari-plugin-engine >=0.1.4', 'scikit-image >=0.19', 'empanada-dl >=0.1.7', 'imagecodecs', 'openpyxl']","# empanada-napari +25,Cochlea SynapSeg,0.0.1,,,cochlea-synapseg,Cayla Miller,cayla@ucsd.edu," +Copyright (c) 2024, Cayla Miller +All rights reserved. + +Redistribution and use in source and binary forms, with or without +modification, are permitted provided that the following conditions are met: + +* Redistributions of source code must retain the above copyright notice, this + list of conditions and the following disclaimer. + +* Redistributions in binary form must reproduce the above copyright notice, + this list of conditions and the following disclaimer in the documentation + and/or other materials provided with the distribution. + +* Neither the name of copyright holder nor the names of its + contributors may be used to endorse or promote products derived from + this software without specific prior written permission. + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ""AS IS"" +AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE +IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE +DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE +FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL +DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR +SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER +CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, +OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE +OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. +",,"A plugin to segment cochlear ribbon synapses automatically, as well as edit and adjust",>=3.9,"['numpy', 'qtpy', 'scikit-image', 'scipy', 'zarr', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# cochlea-synapseg + +[![License BSD-3](https://img.shields.io/pypi/l/cochlea-synapseg.svg?color=green)](https://github.com/ucsdmanorlab/cochlea-synapseg/raw/main/LICENSE) +[![PyPI](https://img.shields.io/pypi/v/cochlea-synapseg.svg?color=green)](https://pypi.org/project/cochlea-synapseg) +[![Python Version](https://img.shields.io/pypi/pyversions/cochlea-synapseg.svg?color=green)](https://python.org) +[![tests](https://github.com/ucsdmanorlab/cochlea-synapseg/workflows/tests/badge.svg)](https://github.com/ucsdmanorlab/cochlea-synapseg/actions) +[![codecov](https://codecov.io/gh/ucsdmanorlab/cochlea-synapseg/branch/main/graph/badge.svg)](https://codecov.io/gh/ucsdmanorlab/cochlea-synapseg) +[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/cochlea-synapseg)](https://napari-hub.org/plugins/cochlea-synapseg) + +A plugin to segment cochlear ribbon synapses. + +More is in the works, but for now it includes tools to more quickly generate ground truth ribbon segmentation (Plugins > SynapSeg - Ground Truth Widget). + +---------------------------------- + +This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template. + + + +## Installation + +You can install `cochlea-synapseg` (receommended: in a new conda environment with up-to-date napari) via [pip]: + + python -m pip install cochlea-synapseg + +## Usage + +After successfull installation, you can find the plugin next time you launch napari (Plugins > SynapSeg - Ground Truth Widget). + +The ground truth widget is divided into multiple sections, for ""quick use"", be sure to check the settings denoted with asterisks: + +### Image Tools + +![image_tools](https://github.com/user-attachments/assets/323984ad-2cd3-4816-8ee5-e8b3f5063bc0) + +\***1. Image Layer Selection** - use the dropdown to select the name of your image layer (here, the layer that contains the ribbon stain) + +(First load a 3D image using one of napari's native readers, or using the Cochlea-Synapseg .zarr reader (reads a .zarr with '3d/raw' and '3d/labeled').) + +\***2. Refresh Image Layer Selection** - update the list of available image layers in #1 + +**3. Pixel size information** - (in microns), used for some point readers to successfully convert real units to pixel coordinates. Can be left as 1 if this functionality is not needed. + +**4. Split channels** - splits multiple channels into separate image layers (useful for FIJI-saved .tif images) + +### Points Tools & Points to Labels + +![points_tools](https://github.com/user-attachments/assets/6b271d5c-51c1-4ca4-b3c0-683dddd69dc8) + +**5. Points Layer Selection and Refresh** - use the dropdown to select an existing points layer, use the refresh button to update the list (or skip to #8 if not loading in existing points) + +**6. Real -> Pixel Units** - if you've loaded some points were saved in real units, make sure the pixel size information above in #3 is correct, then click ""real -> pixel units"" + +**7. Channel Adjustment** - some points (like ImageJ/FIJI rois or CellCounter points), show up in the wrong z plane because their ""slice"" coordinates are a combination of both slice and channel info. If this happens, set the number of channels (in the original image, where the ROIs were created!), and then click ""chan -> z convert"". Z coordinates of the points layer will be divided by the number of channels specified. + +\***8. New Points Layer** - if starting annotation from scratch, click to create a new points layer. #5 should automatically select this new layer. + +\***9. Rotate to XY and \*10. Auto-adjust Z** - these convenient functions allow you to quickly annotate points in Napari's 3D view. Simply click ""Rotate to XY before adding new points. These points will now have the correct XY position but will have missing Z information. (Rotate out of XY to confirm.) Click ""Auto-adjust z"" and the z will automatically adjust to the brightest point. + +**11. Manually Edit Z** - useful for overlapping points, can be used to manually edit the z position of ONLY selected points. Use the +/- arrow keys for single z steps type in a number to move a larger amount. + +**12. Snap too Max** - will automatically adjust all points to their local max (search radius defined in pixels in Advanced Settings -> snap to max rad). Useful for adjusting quickly dropped points, but proceed with caution if you have close-together points. + +\***13. Points to Labels** - the key functionality of the module, creates a label layer by performing a local segmentation on all points. + +**14. Advanced Settings** - adjust settings for the points to labels function to optimize local segmentation and watershed separation of points. + +### Labels Tools + +![labels_tools](https://github.com/user-attachments/assets/6ef20ff6-61e2-4337-a177-8f957a67fb39) + +**15. Lables Layer Selection and Refresh** - use the dropdown to select an existing labels layer, use the refresh button to update the list + +**16. Make Labels Editable** - zarrs and other file formats tend to load in as dask arrays, which don't allow editing. Checking this box will make the labels layer editable by converting to a numpy array (will load the layer into memory, so be careful if dealing with large images!). This will allow you to edit the labels layer with tools like the paintbrush and eraser. Automatically enables if merging or removing labels is requested (see #17 and #19) + +\***17. Remove a Label** - use the labels layer eyedropper tool to identify the ID of an unwanted label, then type in the box and click ""Remove label"" + +**18. Max Label Display** - shows the current maximum label ID. If you're painting labels by hand and need a new label ID, increment above this number. Use the refresh button to the right to get an up-to-date number if you've made changes to your label layer. + +\***19. Merge labels** - if you have an existing labels layer, and then create new labels (e.g. from the points to labels function), select the layer you'd like to merge into your existing labels layer (i.e. box 15 and 19a should be different from one another!), and then click ""merge labels"". This function will automatically ensure overlapping label IDs are not used. + +**20. Labels to Points** - if wanted, you can take all your existing labels and convert them to a points layer based on their centroids. This may be helpful for quickly generating better labels using the points tools above. + +### Save to Zarr + +![save_zarr](https://github.com/user-attachments/assets/1d824f49-012f-4fac-8fa1-64d7d319cd34) + +Functionality to save to .zarr format. Saves image as '3d/raw' and labels as '3d/labeled'. Used for later auto-segmentation of ribbons (not live in this plugin yet, but coming soon!). + +\***21. File Path** - the directory in which to save the zarr; use the folder icon to search for an existing directory + +\***22. File Name** - the zarr name to save to; use the magnifying glass icon to select an existing .zarr + +**23. From Source** - set the file path and name to where the image layer was loaded from. (Caution: if you loaded a zarr, this will result in the zarr being overwritten!) + +\***24. Save 3D Only (recommended)** - saves the image and labels layers (selected in #1 and #15) in the specified .zarr, as 3d/raw and 3d/labeled, respectively. A reader is included with this plugin for this format as well. + +**25. Save 2D and 3D** - (not recommended) to be used in the future if 2D models are to be run on the data, saves both the 3D stacks as in 24, and then individual 2D slices for each z in 2d/raw/[z] and 2d/labeled/[z] + + + +## Contributing + +Contributions are very welcome. Tests can be run with [tox], please ensure +the coverage at least stays the same before you submit a pull request. + +## License + +Distributed under the terms of the [BSD-3] license, +""cochlea-synapseg"" is free and open source software + +## Issues + +If you encounter any problems, please [file an issue] along with a detailed description. + +[napari]: https://github.com/napari/napari +[Cookiecutter]: https://github.com/audreyr/cookiecutter +[@napari]: https://github.com/napari +[MIT]: http://opensource.org/licenses/MIT +[BSD-3]: http://opensource.org/licenses/BSD-3-Clause +[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt +[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt +[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0 +[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt +[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin + +[napari]: https://github.com/napari/napari +[tox]: https://tox.readthedocs.io/en/latest/ +[pip]: https://pypi.org/project/pip/ +[PyPI]: https://pypi.org/ +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']",,cochlea-synapseg.get_reader,cochlea-synapseg.write_multiple,cochlea-synapseg.make_gtwidget,cochlea-synapseg.make_sample_data,"['*.zarr', '*.xml', '*.csv', '*.xls', '*.XLS']",,['.npy'],https://pypi.org/project/cochlea-synapseg,, +26,cryaleconcho,0.0.7,,,cryaleconcho,Ryan Conrad,conradrw@nih.gov,BSD-3-Clause,,Napari plugin of algorithms for Panoptic Segmentation of organelles in EM,>=3.7,"['napari >=0.4.16', 'numpy ==1.22', 'napari-plugin-engine >=0.1.4', 'scikit-image >=0.19', 'empanada-dl >=0.1.7', 'imagecodecs', 'openpyxl']","# empanada-napari **The preprint describing this work is now available [on bioRxiv](https://www.biorxiv.org/content/10.1101/2022.03.17.484806v1).** @@ -2126,12 +2598,12 @@ If you use results generated by this plugin in a publication, please cite: } ``` ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/volume-em/empanada-napari/issues', 'Documentation, https://github.com/volume-em/empanada-napari#README.md', 'Source Code, https://github.com/volume-em/empanada-napari', 'User Support, https://github.com/volume-em/empanada-napari/issues']",,,cryaleconcho.test_widget,,,,,https://pypi.org/project/cryaleconcho,, -23,cryocanvas,0.0.1,,,cryocanvas,Kyle Harrington,czii@kyleharrington.com,MIT,,A plugin for interactive segmentation of CryoET data using ML embeddings,>=3.8,"['numpy', 'magicgui', 'qtpy', 'scikit-image', 'toolz', 'scikit-learn', 'psygnal', 'superqt', 'zarr', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# cryocanvas +27,cryocanvas,0.0.1,,,cryocanvas,Kyle Harrington,czii@kyleharrington.com,MIT,,A plugin for interactive segmentation of CryoET data using ML embeddings,>=3.8,"['numpy', 'magicgui', 'qtpy', 'scikit-image', 'toolz', 'scikit-learn', 'psygnal', 'superqt', 'zarr', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# cryocanvas A tool to support interactive machine learning for cryoET data ![cryocanvas screenshot](cover.png) ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/kephale/cryocanvas/issues', 'Documentation, https://github.com/kephale/cryocanvas#README.md', 'Source Code, https://github.com/kephale/cryocanvas', 'User Support, https://github.com/kephale/cryocanvas/issues']",,,cryocanvas.make_qwidget,,,,,https://pypi.org/project/cryocanvas,, -24,Cut Detector,1.2.1,,,cut-detector,Thomas Bonte,thomas.bonte@mines-paristech.fr,BSD-3-Clause,,Automatic Cut Detector,>=3.9,"['cellpose==3.0.9', 'pyimagej', 'cnn-framework==0.0.16', 'magicgui', 'pydantic==1.10.12', 'xmltodict', 'shapely', 'aicsimageio==4.14.0', 'fsspec==2023.6.0', 'charset-normalizer==3.3.0', 'napari[all]', 'laptrack==0.16.2', 'scikit-learn==1.5.0', 'numba>=0.59.1', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# Cut Detector +28,Cut Detector,1.4.0,,,cut-detector,Thomas Bonte,thomas.bonte@mines-paristech.fr,BSD-3-Clause,,Automatic Cut Detector,>=3.9,"['cellpose==3.0.9', 'pyimagej', 'cnn-framework==0.0.16', 'magicgui', 'pydantic==1.10.12', 'xmltodict', 'shapely', 'aicsimageio==4.14.0', 'fsspec==2023.6.0', 'charset-normalizer==3.3.0', 'napari[all]', 'laptrack==0.16.2', 'scikit-learn==1.5.0', 'numba>=0.59.1', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# Cut Detector [![License BSD-3](https://img.shields.io/pypi/l/cut-detector.svg?color=green)](https://github.com/15bonte/cut-detector/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/cut-detector.svg?color=green)](https://pypi.org/project/cut-detector) @@ -2142,7 +2614,7 @@ A tool to support interactive machine learning for cryoET data Automatic micro-tubule cut detector. -https://github.com/user-attachments/assets/89d63336-729c-43c1-8fa3-43a4ec4cfc87 +https://github.com/user-attachments/assets/356efbf6-d78a-44a0-ad94-de3de83f01ed --- @@ -2226,7 +2698,7 @@ Each detected cell division is labeled with one of the following categories: - MORE_THAN_TWO_DAUGHTER_TRACKS: Tripolar division. This category encompasses both actual tripolar divisions and wrong identifications of daughter cells (mainly caused by segmentation issues). - NEAR_BORDER: Division close to the border of the image, hence ignored as it is likely to be difficult to detect micro-tubule cuts. A division is classified as NEAR_BORDER as soon as the distance between 1 detected mid-body and the border of the image is less than 20px. - NO_CUT_DETECTED: Division whose mid-body was detected, but with all micro-tubule bridges classified as ""No cut"". Likely to be at the end of the video, cells dying before the end of division, or cells going out of frame. -- TOO_SHORT_CUT: First micro-tubule cut detected before 50 minutes. Ignored as this is very unlikely, so it is probably caused by a wrong division detection. +- TOO_SHORT_CUT: First micro-tubule cut detected before or at 50 minutes. Ignored as this is very unlikely, so it is probably caused by a wrong division detection. ## Contributing @@ -2262,7 +2734,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [NVIDIA]: https://www.nvidia.com/Download/index.aspx?lang=en-us [conda]: https://docs.conda.io/en/latest/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/15bonte/cut-detector/issues', 'Documentation, https://github.com/15bonte/cut-detector#README.md', 'Source Code, https://github.com/15bonte/cut-detector', 'User Support, https://github.com/15bonte/cut-detector/issues']",,,cut-detector.whole_process,,,,,https://pypi.org/project/cut-detector,, -25,cylindra,1.0.0b5,,,cylindra,Hanjin Liu,liuha@med.kobe-u.ac.jp,,,"Spectral analysis, simulation and subtomogram averaging of heterogenic cylindrical structures",>=3.10,"['impy-array >=2.4.2', 'acryo >=0.4.13', 'macro-kit >=0.4.6', 'magicgui >=0.8.1', 'magic-class >=0.7.11', 'psygnal >=0.9.1', 'superqt[iconify] >=0.6.1', 'pydantic >=1.10.0', 'pydantic-compat', 'pyqtgraph >=0.12.4', 'pyarrow >=11.0.0', 'numpy >=1.23.0', 'scipy >=1.11.3', 'pandas >=1.5.0', 'polars >=1.1.0', 'scikit-image >=0.21.0', 'napari >=0.5.1', 'qtpy >=2.3.1', 'qt-command-palette >=0.0.7', 'matplotlib >=3.8.1', 'rich >=13.6.0', 'dask >=2023.12.1', ""pytest ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""scikit-learn >=1.2.2 ; extra == 'testing'"", ""mrcfile >=1.3.0 ; extra == 'testing'"", ""tifffile >=2023.2.28 ; extra == 'testing'"", ""starfile ; extra == 'testing'"", ""imodmodel ; extra == 'testing'"", ""cookiecutter ; extra == 'testing'"", ""maturin >=1.5.0, <2.0.0 ; extra == 'testing'"", ""pyqt5 ; extra == 'all'"", ""scikit-learn >=1.2.2 ; extra == 'all'"", ""mrcfile >=1.3.0 ; extra == 'all'"", ""tifffile >=2023.2.28 ; extra == 'all'"", ""starfile ; extra == 'all'"", ""imodmodel ; extra == 'all'"", ""cookiecutter ; extra == 'all'"", ""pyqt5 ; extra == 'docs'"", ""mkdocs >=1.5.3 ; extra == 'docs'"", ""mkdocs-autorefs >=0.5.0 ; extra == 'docs'"", ""mkdocs-gen-files >=0.5.0 ; extra == 'docs'"", ""mkdocs-material >=9.5.2 ; extra == 'docs'"", ""mkdocs-material-extensions >=1.3.1 ; extra == 'docs'"", ""mkdocstrings >=0.24.0 ; extra == 'docs'"", ""mkdocstrings-python >=1.7.5 ; extra == 'docs'"", ""maturin >=1.5.0, <2.0.0 ; extra == 'docs'""]","[![BSD 3-Clause License](https://img.shields.io/pypi/l/cylindra.svg?color=green)](https://github.com/hanjinliu/cylindra/blob/main/LICENSE) +29,cylindra,1.0.0b5,,,cylindra,Hanjin Liu,liuha@med.kobe-u.ac.jp,,,"Spectral analysis, simulation and subtomogram averaging of heterogenic cylindrical structures",>=3.10,"['impy-array >=2.4.2', 'acryo >=0.4.13', 'macro-kit >=0.4.6', 'magicgui >=0.8.1', 'magic-class >=0.7.11', 'psygnal >=0.9.1', 'superqt[iconify] >=0.6.1', 'pydantic >=1.10.0', 'pydantic-compat', 'pyqtgraph >=0.12.4', 'pyarrow >=11.0.0', 'numpy >=1.23.0', 'scipy >=1.11.3', 'pandas >=1.5.0', 'polars >=1.1.0', 'scikit-image >=0.21.0', 'napari >=0.5.1', 'qtpy >=2.3.1', 'qt-command-palette >=0.0.7', 'matplotlib >=3.8.1', 'rich >=13.6.0', 'dask >=2023.12.1', ""pytest ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""scikit-learn >=1.2.2 ; extra == 'testing'"", ""mrcfile >=1.3.0 ; extra == 'testing'"", ""tifffile >=2023.2.28 ; extra == 'testing'"", ""starfile ; extra == 'testing'"", ""imodmodel ; extra == 'testing'"", ""cookiecutter ; extra == 'testing'"", ""maturin >=1.5.0, <2.0.0 ; extra == 'testing'"", ""pyqt5 ; extra == 'all'"", ""scikit-learn >=1.2.2 ; extra == 'all'"", ""mrcfile >=1.3.0 ; extra == 'all'"", ""tifffile >=2023.2.28 ; extra == 'all'"", ""starfile ; extra == 'all'"", ""imodmodel ; extra == 'all'"", ""cookiecutter ; extra == 'all'"", ""pyqt5 ; extra == 'docs'"", ""mkdocs >=1.5.3 ; extra == 'docs'"", ""mkdocs-autorefs >=0.5.0 ; extra == 'docs'"", ""mkdocs-gen-files >=0.5.0 ; extra == 'docs'"", ""mkdocs-material >=9.5.2 ; extra == 'docs'"", ""mkdocs-material-extensions >=1.3.1 ; extra == 'docs'"", ""mkdocstrings >=0.24.0 ; extra == 'docs'"", ""mkdocstrings-python >=1.7.5 ; extra == 'docs'"", ""maturin >=1.5.0, <2.0.0 ; extra == 'docs'""]","[![BSD 3-Clause License](https://img.shields.io/pypi/l/cylindra.svg?color=green)](https://github.com/hanjinliu/cylindra/blob/main/LICENSE) [![Python package index download statistics](https://img.shields.io/pypi/dm/cylindra.svg)](https://pypistats.org/packages/cylindra) [![PyPI version](https://badge.fury.io/py/cylindra.svg)](https://badge.fury.io/py/cylindra) [![codecov](https://codecov.io/gh/hanjinliu/cylindra/graph/badge.svg?token=X1F259JYT5)](https://codecov.io/gh/hanjinliu/cylindra) @@ -2364,7 +2836,7 @@ bioRxiv 2024.04.30.591984; doi: https://doi.org/10.1101/2024.04.30.591984 ``` ","['Programming Language :: Rust', 'Programming Language :: Python :: Implementation :: CPython', 'Programming Language :: Python :: Implementation :: PyPy', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Framework :: napari']",,,,cylindra.main_widget,,,,,https://pypi.org/project/cylindra,, -26,darth-d,0.4.0,2023-12-04,2023-12-08,darth-d,Robert Haase,robert.haase@uni-leipzig.de,BSD-3-Clause,https://pypi.org/project/darth-d,A simple to use image generator based on OpenAIs DALL-E,>=3.8,"['openai >=1.2.0', 'Pillow', 'numpy', 'stackview >=0.7.1']","# Darth-D +30,darth-d,0.4.0,2023-12-04,2023-12-08,darth-d,Robert Haase,robert.haase@uni-leipzig.de,BSD-3-Clause,https://pypi.org/project/darth-d,A simple to use image generator based on OpenAIs DALL-E,>=3.8,"['openai >=1.2.0', 'Pillow', 'numpy', 'stackview >=0.7.1']","# Darth-D [![License](https://img.shields.io/pypi/l/darth-d.svg?color=green)](https://github.com/haesleinhuepf/darth-d/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/darth-d.svg?color=green)](https://pypi.org/project/darth-d) [![Python Version](https://img.shields.io/pypi/pyversions/darth-d.svg?color=green)](https://python.org) @@ -2451,7 +2923,7 @@ Distributed under the terms of the [BSD-3] license, [BSD-3]: http://opensource.org/licenses/BSD-3-Clause ","['Framework :: napari', 'License :: OSI Approved :: BSD License', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent']","['Bug Tracker, https://github.com/haesleinhuepf/darth-d/issues', 'Documentation, https://github.com/haesleinhuepf/darth-d/', 'Source Code, https://github.com/haesleinhuepf/darth-d', 'User Support, https://forum.image.sc/']",,,darth-d.napari_experimental_provide_function,,,,,https://pypi.org/project/darth-d,, -27,De Palma lab,0.1.4,,,depalma-napari-omero,Mallory Wittwer,Mallory Wittwer ,BSD 3-Clause,,Napari interface for the De Palma lab.,"<3.10,>=3.9","['napari[all] >=0.4.16', 'qtpy', 'magicgui', 'napari-label-focus >=0.0.9', 'napari-remove-objects', 'mousetumornet', 'ezomero ==1.1.1', 'numpy', 'pandas', 'trackpy', 'imagecodecs[all]', 'tifffile', 'pooch']","![EPFL Center for Imaging logo](https://imaging.epfl.ch/resources/logo-for-gitlab.svg) +31,De Palma lab,0.1.4,,,depalma-napari-omero,Mallory Wittwer,Mallory Wittwer ,BSD 3-Clause,,Napari interface for the De Palma lab.,"<3.10,>=3.9","['napari[all] >=0.4.16', 'qtpy', 'magicgui', 'napari-label-focus >=0.0.9', 'napari-remove-objects', 'mousetumornet', 'ezomero ==1.1.1', 'numpy', 'pandas', 'trackpy', 'imagecodecs[all]', 'tifffile', 'pooch']","![EPFL Center for Imaging logo](https://imaging.epfl.ch/resources/logo-for-gitlab.svg) ![screenshot](./assets/screenshot.png) # De Palma Lab - Center for Imaging (2024) @@ -2511,7 +2983,7 @@ python pyapp/build.py - [JupyterHub (De Palma)](https://gitlab.com/epfl-center-for-imaging/depalma-jupyterhub) ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'License :: OSI Approved :: BSD License', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Topic :: Scientific/Engineering :: Image Processing']","['homepage, https://github.com/EPFL-Center-for-Imaging/depalma-napari-omero', 'repository, https://github.com/EPFL-Center-for-Imaging/depalma-napari-omero']",,,depalma-napari-omero.start,,,,,https://pypi.org/project/depalma-napari-omero,, -28,devbio-napari,0.10.1,2022-04-06,2023-06-11,devbio-napari,Robert Haase,robert.haase@tu-dresden.de,BSD-3,https://github.com/haesleinhuepf/devbio-napari,A bundle of napari plugins useful for 3D+t image processing and analysis for studying developmental biology.,>=3.8,"['napari-plugin-engine (>=0.1.4)', 'npe2 (<0.7.0)', 'numpy (>=1.21.4)', 'napari-pyclesperanto-assistant', 'napari-skimage-regionprops', 'napari-animation', 'PlatyMatch', 'napari-plot-profile', 'napari-accelerated-pixel-and-object-classification', 'napari-brightness-contrast', 'napari-plugin-search', 'napari-segment-blobs-and-things-with-membranes', 'napari-simpleitk-image-processing', 'napari-folder-browser', 'napari-crop', 'napari-clusters-plotter (>=0.7.1)', 'napari-tabu', 'napari-workflow-optimizer', 'napari-workflow-inspector', 'napari-curtain', 'napari-layer-details-display', 'napari', 'vispy', 'napari-mouse-controls', 'the-segmentation-game', 'napari-blob-detection', 'jupyterlab', 'napari-czifile2', 'napari-roi', 'pydantic (!=1.10.0)', 'napari-pystackreg', 'imageio (!=2.22.1)', 'redlionfish', 'jupyter-server (<2.0.0)', 'seaborn']","# devbio-napari +32,devbio-napari,0.11.0,2022-04-06,2024-10-29,devbio-napari,Robert Haase,robert.haase@uni-leipzig.de,BSD-3,https://github.com/haesleinhuepf/devbio-napari,A bundle of napari plugins useful for 3D+t image processing and analysis for studying developmental biology.,>=3.9,"['napari-plugin-engine>=0.1.4', 'npe2', 'numpy>=1.21.4', 'napari-assistant>=0.4.9', 'napari-pyclesperanto-assistant>=0.23.0', 'napari-skimage-regionprops', 'napari-animation', 'PlatyMatch', 'napari-plot-profile', 'napari-accelerated-pixel-and-object-classification', 'napari-brightness-contrast', 'napari-plugin-search', 'napari-segment-blobs-and-things-with-membranes', 'napari-simpleitk-image-processing', 'napari-stl-exporter', 'napari-folder-browser', 'napari-crop', 'napari-clusters-plotter>=0.7.1', 'napari-tabu', 'napari-workflow-optimizer', 'napari-workflow-inspector', 'napari-curtain', 'napari-layer-details-display', 'napari', 'vispy', 'napari-mouse-controls', 'the-segmentation-game', 'napari-blob-detection', 'jupyterlab', 'napari-czifile2', 'napari-roi', 'pydantic!=1.10.0', 'napari-pystackreg', 'imageio!=2.22.1', 'redlionfish', 'jupyter-server', 'seaborn']","# devbio-napari [![License](https://img.shields.io/pypi/l/devbio-napari.svg?color=green)](https://github.com/haesleinhuepf/devbio-napari/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/devbio-napari.svg?color=green)](https://pypi.org/project/devbio-napari) @@ -2584,6 +3056,8 @@ A bundle of napari plugins useful for 3D+t image processing and analysis for stu * Quantification * [skimage-regionprops](https://www.napari-hub.org/plugins/napari-skimage-regionprops) * Quantification +* [stl-exporter](https://www.napari-hub.org/plugins/napari-stl-exporter) + * File input/output * [tabu](https://www.napari-hub.org/plugins/napari-tabu) * Interaction * [the-segmentation-game](https://www.napari-hub.org/plugins/the-segmentation-game) @@ -2600,16 +3074,10 @@ A bundle of napari plugins useful for 3D+t image processing and analysis for stu ## Installation You can install `devbio-napari` via conda/mamba. If you have never used conda before, please [read this guide first](https://biapol.github.io/blog/mara_lampert/getting_started_with_mambaforge_and_python/readme.html). -Start by installing mamba in your base environment: - -``` -conda install mamba -c conda-forge -``` - -Afterwards, create an environment using mamba. +Start by creating an environment using mamba. ``` -mamba create --name devbio-napari-env python=3.9 devbio-napari -c conda-forge -c pytorch +mamba create --name devbio-napari-env napari=0.4.19 python=3.9 devbio-napari pyqt -c conda-forge -c pytorch ``` Afterwards, activate the environment like this: @@ -2699,8 +3167,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -","['Development Status :: 3 - Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/haesleinhuepf/devbio-napari/issues', 'Documentation, https://github.com/haesleinhuepf/devbio-napari#README.md', 'Source Code, https://github.com/haesleinhuepf/devbio-napari', 'User Support, https://github.com/haesleinhuepf/devbio-napari/issues']",,,,,,,,https://pypi.org/project/devbio-napari,https://github.com/haesleinhuepf/devbio-napari, -29,Disease classifier,0.0.1,,,disease-classifier,Chenqi Zhang,cqzhang@g.ecc.u-tokyo.ac.jp,BSD-3-Clause,,A disease classifier based on iPAC images.,>=3.8,"['numpy', 'magicgui', 'qtpy', 'matplotlib', 'h5py (>=3.6.0)', 'napari (>=0.4.15)', 'numpy (>=1.22.4)', 'opencv-contrib-python-headless (>=4.5.5.64)', 'pytranskit (>=0.2.3)', 'statsmodels (>=0.13.2)', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# disease-classifier +","['Development Status :: 3 - Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/haesleinhuepf/devbio-napari/issues', 'Documentation, https://github.com/haesleinhuepf/devbio-napari#README.md', 'Source Code, https://github.com/haesleinhuepf/devbio-napari', 'User Support, https://github.com/haesleinhuepf/devbio-napari/issues']",,,,,,,,https://pypi.org/project/devbio-napari,https://github.com/haesleinhuepf/devbio-napari, +33,Disease classifier,0.0.1,,,disease-classifier,Chenqi Zhang,cqzhang@g.ecc.u-tokyo.ac.jp,BSD-3-Clause,,A disease classifier based on iPAC images.,>=3.8,"['numpy', 'magicgui', 'qtpy', 'matplotlib', 'h5py (>=3.6.0)', 'napari (>=0.4.15)', 'numpy (>=1.22.4)', 'opencv-contrib-python-headless (>=4.5.5.64)', 'pytranskit (>=0.2.3)', 'statsmodels (>=0.13.2)', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# disease-classifier [![License](https://img.shields.io/pypi/l/disease-classifier.svg?color=green)](https://github.com/zcqwh/disease-classifier/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/disease-classifier.svg?color=green)](https://pypi.org/project/disease-classifier) @@ -2795,7 +3263,7 @@ https://napari.org/plugins/stable/index.html [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/zcqwh/disease-classifier/issues', 'Documentation, https://github.com/zcqwh/disease-classifier#README.md', 'Source Code, https://github.com/zcqwh/disease-classifier', 'User Support, https://github.com/zcqwh/disease-classifier/issues']",,,disease-classifier.make_qwidget,,,,,https://pypi.org/project/disease-classifier,, -30,domb-napari,0.3.0,2023-12-08,2024-07-11,domb-napari,Borys Olifirov,omnia.fatum@gmail.com,MIT,https://pypi.org/project/domb-napari,napari plugin for analyzing fluorescence-labeled proteins redistribution,>=3.8,"['napari', 'domb', 'dipy']","domb-napari +34,domb-napari,0.3.0,2023-12-08,2024-07-11,domb-napari,Borys Olifirov,omnia.fatum@gmail.com,MIT,https://pypi.org/project/domb-napari,napari plugin for analyzing fluorescence-labeled proteins redistribution,>=3.8,"['napari', 'domb', 'dipy']","domb-napari =========== [![Stand With Ukraine](https://raw.githubusercontent.com/vshymanskyy/StandWithUkraine/main/banner-direct-single.svg)](https://stand-with-ukraine.pp.ua) @@ -3023,7 +3491,7 @@ Absolute intensity | ![](https://raw.githubusercontent.com/wisstock/domb :-------------------------:|:-------------------------: __ΔF/F0__|![](https://raw.githubusercontent.com/wisstock/domb-napari/master/images/stat_lab_df.png) ","['Framework :: napari', 'Development Status :: 3 - Alpha', 'License :: OSI Approved :: MIT License', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Operating System :: OS Independent', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Image Recognition', 'Topic :: Utilities']","['Documentation, https://domb.bio/', 'Source Code, https://github.com/wisstock/domb-napari', 'Bug Tracker, https://github.com/wisstock/domb-napari/issues', 'User Support, https://github.com/wisstock/domb-napari/issues']",,,domb-napari.dw_registration_widget,,,,,https://pypi.org/project/domb-napari,, -31,elastix-napari,0.2.1,,,elastix-napari,Viktor van der Valk,v.o.van_der_valk@lumc.nl,Apache Software License 2.0,,A toolbox for rigid and nonrigid registration of images.,>=3.8,"['itk-elastix (>=0.11.1)', 'numpy (>=1.19.0)', 'napari[all] (>=0.4.6)', 'napari-plugin-engine (>=0.1.4)', 'magicgui (>=0.4.0)', 'itk-napari-conversion (>=0.3.1)', 'napari-itk-io (>=0.1.0)']","# elastix-napari +35,elastix-napari,0.2.1,,,elastix-napari,Viktor van der Valk,v.o.van_der_valk@lumc.nl,Apache Software License 2.0,,A toolbox for rigid and nonrigid registration of images.,>=3.8,"['itk-elastix (>=0.11.1)', 'numpy (>=1.19.0)', 'napari[all] (>=0.4.6)', 'napari-plugin-engine (>=0.1.4)', 'magicgui (>=0.4.0)', 'itk-napari-conversion (>=0.3.1)', 'napari-itk-io (>=0.1.0)']","# elastix-napari [![License](https://img.shields.io/pypi/l/elastix-napari.svg?color=green)](https://github.com/SuperElastix/elastix-napari/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/elastix-napari.svg?color=green)](https://pypi.org/project/elastix-napari) @@ -3076,7 +3544,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [Jupyter notebooks]: https://mybinder.org/v2/gh/InsightSoftwareConsortium/ITKElastix/master?urlpath=lab/tree/examples%2FITK_Example01_SimpleRegistration.ipynb [youtube]: https://www.youtube.com/watch?v=GzbP-qUR034 ","['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: Apache Software License']","['Project Site, https://elastix.lumc.nl/', 'Bug Tracker, https://github.com/SuperElastix/elastix-napari/issues', 'Source Code, https://github.com/SuperElastix/elastix-napari', 'User Support, https://groups.google.com/g/elastix-imageregistration']",,,elastix-napari.elastix_registration,,,,,https://pypi.org/project/elastix-napari,, -32,empanada-napari,1.1.1,2023-04-17,2023-06-18,empanada-napari,"Madeline Barry, Abhishek Bhardwaj, Ryan Conrad",abhishek.bhardwaj@nih.gov,BSD-3-Clause,https://github.com/volume-em/empanada-napari,Napari plugin of algorithms for Panoptic Segmentation of organelles in EM,>=3.7,"['opencv-python ==4.9.0.80', 'opencv-python-headless ==4.9.0.80', 'napari ==0.4.18', 'numpy ==1.22', 'napari-plugin-engine >=0.1.4', 'scikit-image >=0.19', 'empanada-dl >=0.1.7', 'numba ==0.59.0', 'imagecodecs', 'openpyxl', 'imagehash', 'mlflow', 'simpleitk', 'tqdm']","# empanada-napari +36,empanada-napari,1.1.1,2023-04-17,2023-06-18,empanada-napari,"Madeline Barry, Abhishek Bhardwaj, Ryan Conrad",abhishek.bhardwaj@nih.gov,BSD-3-Clause,https://github.com/volume-em/empanada-napari,Napari plugin of algorithms for Panoptic Segmentation of organelles in EM,>=3.7,"['opencv-python ==4.9.0.80', 'opencv-python-headless ==4.9.0.80', 'napari ==0.4.18', 'numpy ==1.22', 'napari-plugin-engine >=0.1.4', 'scikit-image >=0.19', 'empanada-dl >=0.1.7', 'numba ==0.59.0', 'imagecodecs', 'openpyxl', 'imagehash', 'mlflow', 'simpleitk', 'tqdm']","# empanada-napari > [!IMPORTANT] > **New Version Announcement!** @@ -3207,7 +3675,48 @@ If you use results generated by this plugin in a publication, please cite: } ``` ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/volume-em/empanada-napari/issues', 'Documentation, https://github.com/volume-em/empanada-napari#README.md', 'Source Code, https://github.com/volume-em/empanada-napari', 'User Support, https://github.com/volume-em/empanada-napari/issues']",,,empanada-napari.test_widget,,,,,https://pypi.org/project/empanada-napari,https://github.com/volume-em/empanada-napari, -33,EpiTools,0.0.12,2023-08-01,2023-09-07,epitools,Yanlan Mao,"""Daniel R. Matthews"" , Giulia Paci , Pablo Vicente Munuera , ""Patrick J. Roddy"" , ""Paul J. Smith"" , Yanlan Mao ",BSD 3-Clause,https://github.com/epitools/epitools,Quantifying 2D cell shape and epithelial tissue dynamics,>=3.9,"['PartSeg', 'magicgui', 'matplotlib', 'napari', 'networkx', 'numpy', 'pandas', 'scikit-image >=0.20', 'scipy', ""black ; extra == 'dev'"", ""mypy ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""pyqt5 ; extra == 'dev'"", ""ruff ; extra == 'dev'"", ""tox ; extra == 'dev'"", ""myst-parser ; extra == 'docs'"", ""pydata-sphinx-theme ; extra == 'docs'"", ""pytz ; extra == 'docs'"", ""sphinx-autobuild ; extra == 'docs'"", ""sphinx <5 ; extra == 'docs'"", ""sphinx-autodoc-typehints ; extra == 'docs'"", ""sphinxcontrib-video ; extra == 'docs'"", ""types-pytz ; extra == 'docs'"", ""btrack[napari] >=0.6.1 ; extra == 'wf'"", ""napari-segment-blobs-and-things-with-membranes ; extra == 'wf'""]","[![Licence](https://img.shields.io/pypi/l/epitools.svg?color=green)](https://raw.githubusercontent.com/epitools/epitools/main/LICENCE.md) +37,EpiCure,0.1.3,,,epicure,Gaëlle Letort,,BSD-3-Clause,,Napari plugin to manually correct epithelia segmentation in movies,>=3.8,"['napari<=0.4.19', 'numpy', 'magicgui', 'qtpy', 'scikit-image', 'opencv-python-headless', 'roifile', 'xlsxwriter', 'laptrack', 'matplotlib', 'imagecodecs', 'edt', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# EpiCure + +[![License BSD-3](https://img.shields.io/pypi/l/epicure.svg?color=green)](https://gitlab.pasteur.fr/gletort/epicure/raw/main/LICENSE) +[![PyPI](https://img.shields.io/pypi/v/epicure.svg?color=green)](https://pypi.org/project/epicure) +[![Python Version](https://img.shields.io/pypi/pyversions/epicure.svg?color=green)](https://python.org) +[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/epicure)](https://napari-hub.org/plugins/epicure) + +Napari plugin to manually correct epithelia segmentation in movies + + > **Documentation in the [wiki](https://gitlab.pasteur.fr/gletort/epicure/-/wikis/EpiCure)** + +## Installation + +### Install plugin +To install EpiCure on a fresh python virtual environment, type inside the environement: +``` +pip install epicure +``` + +Then launch `Napari`, and the plugin should be visible in the `Plugins` list. + +If you already have an environment with `Napari` installed, you can also install it directly in `Napari>Plugins>Install/Uninstall plugins` + +### Install code +To have the code to be able to modify it, clone this repository. You can use `pip install -e .` so that everytime you update the code, the plugin will be updated. + +## Usage + +Refer to the [wiki](https://gitlab.pasteur.fr/gletort/epicure/-/wikis/EpiCure) for documentation of the different steps possible in the pipeline. + + + +This [napari] plugin was initialized with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template. + +[napari]: https://github.com/napari/napari +[Cookiecutter]: https://github.com/audreyr/cookiecutter +[file an issue]: https://github.com/gletort/epicure/issues +[tox]: https://tox.readthedocs.io/en/latest/ +[pip]: https://pypi.org/project/pip/ +[PyPI]: https://pypi.org/ +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://gitlab.pasteur.fr/gletort/epicure/issues', 'Documentation, https://gitlab.pasteur.fr/gletort/epicure#README.md', 'Source Code, https://gitlab.pasteur.fr/gletort/epicure', 'User Support, https://gitlab.pasteur.fr/gletort/epicure/issues']",,,epicure.start,,,,,https://pypi.org/project/epicure,, +38,EpiTools,0.0.12,2023-08-01,2023-09-07,epitools,Yanlan Mao,"""Daniel R. Matthews"" , Giulia Paci , Pablo Vicente Munuera , ""Patrick J. Roddy"" , ""Paul J. Smith"" , Yanlan Mao ",BSD 3-Clause,https://github.com/epitools/epitools,Quantifying 2D cell shape and epithelial tissue dynamics,>=3.9,"['PartSeg', 'magicgui', 'matplotlib', 'napari', 'networkx', 'numpy', 'pandas', 'scikit-image >=0.20', 'scipy', ""black ; extra == 'dev'"", ""mypy ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""pyqt5 ; extra == 'dev'"", ""ruff ; extra == 'dev'"", ""tox ; extra == 'dev'"", ""myst-parser ; extra == 'docs'"", ""pydata-sphinx-theme ; extra == 'docs'"", ""pytz ; extra == 'docs'"", ""sphinx-autobuild ; extra == 'docs'"", ""sphinx <5 ; extra == 'docs'"", ""sphinx-autodoc-typehints ; extra == 'docs'"", ""sphinxcontrib-video ; extra == 'docs'"", ""types-pytz ; extra == 'docs'"", ""btrack[napari] >=0.6.1 ; extra == 'wf'"", ""napari-segment-blobs-and-things-with-membranes ; extra == 'wf'""]","[![Licence](https://img.shields.io/pypi/l/epitools.svg?color=green)](https://raw.githubusercontent.com/epitools/epitools/main/LICENCE.md) [![PyPI](https://img.shields.io/pypi/v/epitools.svg?color=green)](https://pypi.org/project/epitools) [![Python Version](https://img.shields.io/pypi/pyversions/epitools.svg?color=green)](https://python.org) [![tests](https://github.com/epitools/epitools/actions/workflows/test.yml/badge.svg)](https://github.com/epitools/epitools/actions/workflows/test.yml) @@ -3288,11 +3797,102 @@ detailed description. Contributions are very welcome. Tests can be run with [tox](https://tox.wiki), please ensure the coverage at least stays the same before you submit a pull request. ","['Framework :: napari', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Medical Science Apps.', 'Topic :: Scientific/Engineering :: Bio-Informatics']","['Code, https://github.com/epitools/epitools', 'Download, https://pypi.org/project/epitools', 'Homepage, https://github.com/epitools/epitools', 'Issues, https://github.com/epitools/epitools/issues']",epitools.get_reader,epitools.write_single_image,epitools.projection_widget,epitools.load_sample_data,"['*.tif', '*.tiff']","['.tif', '.tiff']","['.tif', '.tiff']",https://pypi.org/project/epitools,https://github.com/epitools/epitools, -34,faser,0.3.0,,,faser,Johannes Roos,Johannes Roos ,,,Faser is a tool for vectorial psf simulation,"<=3.13,>3.9","['matplotlib>=3.9.2', 'numpy<2', 'pydantic>2', 'python-slugify>=8.0.4', ""rich-click>=1.8.3; extra == 'cli'"", ""pyqt5>=5.15.11; extra == 'full'"", ""rich-click>=1.8.3; extra == 'full'"", ""numba>=0.60.0; extra == 'numba'""]","# faser +39,faser,0.3.0,,,faser,Johannes Roos,Johannes Roos ,,,Faser is a tool for vectorial psf simulation,"<=3.13,>3.9","['matplotlib>=3.9.2', 'numpy<2', 'pydantic>2', 'python-slugify>=8.0.4', ""rich-click>=1.8.3; extra == 'cli'"", ""pyqt5>=5.15.11; extra == 'full'"", ""rich-click>=1.8.3; extra == 'full'"", ""numba>=0.60.0; extra == 'numba'""]","# faser Describe your project here. ",['Framework :: napari'],,,,faser.napari.helper_widget,,,,,https://pypi.org/project/faser,, -35,Fish Scan,1.0.9,,,fish-scan,Arianna Ravera,ariannaravera22@gmail.com," +40,Feature Forest,0.0.6,,,featureforest,"Mehdi Seifi, Vera Galinova","Mehdi Seifi , Vera Galinova ",BSD-3-Clause,,A napari plugin for segmentation using vision transformer features,>=3.10,"['h5py', 'iopath>=0.1.10', 'magicgui', 'matplotlib', 'napari', 'numpy==1.24.4', 'opencv-python', 'pooch', 'pynrrd', 'pyqt5', 'qtpy', 'scikit-image', 'scikit-learn', 'segment-anything-py', 'timm==1.0.9', 'torch==2.3.1', 'torchvision==0.18.1', ""pre-commit; extra == 'dev'"", ""pytest; extra == 'dev'"", ""pytest-cov; extra == 'dev'"", ""sybil; extra == 'dev'"", ""tox; extra == 'dev'"", ""tox-gh-actions; extra == 'dev'""]","# Feature Forest + +[![License BSD-3](https://img.shields.io/pypi/l/featureforest.svg?color=green)](https://github.com/juglab/featureforest/blob/main/LICENSE) +[![PyPI](https://img.shields.io/pypi/v/featureforest.svg?color=green)](https://pypi.org/project/featureforest) +[![Python Version](https://img.shields.io/pypi/pyversions/featureforest.svg?color=green)](https://python.org) +[![tests](https://github.com/juglab/featureforest/workflows/tests/badge.svg)](https://github.com/juglab/featureforest/actions) +[![codecov](https://codecov.io/gh/juglab/featureforest/branch/main/graph/badge.svg)](https://codecov.io/gh/juglab/featureforest) +[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/featureforest)](https://napari-hub.org/plugins/featureforest) + +**A napari plugin for making image annotation using feature space of vision transformers and random forest classifier.** +We developed a *napari* plugin to train a *Random Forest* model using extracted features of vision foundation models and just a few scribble labels provided by the user as input. This approach can do the segmentation of desired objects almost as well as manual segmentations but in a much shorter time with less manual effort. + +---------------------------------- + +## Documentation +The plugin documentation is [here](docs/index.md). + +## Installation +To install this plugin you need to use [conda] or [mamba] to create a environment and install the requirements. Use the commands below to create the environment and install the plugin: +```bash +# for GPU +conda env create -f ./env_gpu.yml +``` +```bash +# if you don't have a GPU +conda env create -f ./env_cpu.yml +``` + +#### Note: You need to install `sam-2` which can be install easily using conda. To install `sam-2` using `pip` please refer to the official [sam-2](https://github.com/facebookresearch/sam2) repository. + +### Requirements +- `python >= 3.10` +- `numpy==1.24.4` +- `opencv-python` +- `scikit-learn` +- `scikit-image` +- `matplotlib` +- `pyqt` +- `magicgui` +- `qtpy` +- `napari` +- `h5py` +- `pytorch=2.3.1` +- `torchvision=0.18.1` +- `timm=1.0.9` +- `pynrrd` +- `segment-anything` +- `sam-2` + +If you want to install the plugin manually using GPU, please follow the pytorch installation instruction [here](https://pytorch.org/get-started/locally/). +For detailed napari installation see [here](https://napari.org/stable/tutorials/fundamentals/installation). + +### Installing The Plugin +If you use the provided conda environment yaml files, the plugin will be installed automatically. But in case you already have the environment setup, +you can just install the plugin. First clone the repository: +```bash +git clone https://github.com/juglab/featureforest +``` +Then run the following commands: +```bash +cd ./featureforest +pip install . +``` + + +## License + +Distributed under the terms of the [BSD-3] license, +""featureforest"" is free and open source software + +## Issues + +If you encounter any problems, please [file an issue] along with a detailed description. + +[napari]: https://github.com/napari/napari +[Cookiecutter]: https://github.com/audreyr/cookiecutter +[@napari]: https://github.com/napari +[MIT]: http://opensource.org/licenses/MIT +[BSD-3]: http://opensource.org/licenses/BSD-3-Clause +[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt +[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt +[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0 +[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt +[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin + +[napari]: https://github.com/napari/napari +[tox]: https://tox.readthedocs.io/en/latest/ +[pip]: https://pypi.org/project/pip/ +[PyPI]: https://pypi.org/ +[conda]: https://conda.io/projects/conda/en/latest/index.html +[mamba]: https://mamba.readthedocs.io/en/latest/installation/mamba-installation.html","['Development Status :: 3 - Alpha', 'Framework :: napari', 'License :: OSI Approved :: BSD License', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['homepage, https://featureforest.github.io/', 'repository, https://github.com/juglab/featureforest']",,,featureforest.make_feature_extractor_widget,,,,,https://pypi.org/project/featureforest,, +41,Fish Scan,1.1.0,,,fish-scan,Arianna Ravera,ariannaravera22@gmail.com," Copyright (c) 2024, Arianna Ravera All rights reserved. @@ -3441,7 +4041,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/ariannaravera/fish-scan/issues', 'Documentation, https://github.com/ariannaravera/fish-scan#README.md', 'Source Code, https://github.com/ariannaravera/fish-scan', 'User Support, https://github.com/ariannaravera/fish-scan/issues']",fish-scan.get_reader,fish-scan.write_multiple,fish-scan.analysis,fish-scan.make_sample_data,['*.npy'],,['.npy'],https://pypi.org/project/fish-scan,, -36,Generate Dense Patches,0.0.2,2023-10-28,2023-10-28,generate-dense-patches,Aayush Bhatawadekar,asbhatawadekar@gmail.com,BSD-3-Clause,https://pypi.org/project/generate-dense-patches,A simple plugin to create a lot of training data from a 3D volume and mask,>=3.8,"['napari >=0.4.18', 'napari-plugin-engine >=0.2.0', 'numpy ==1.22', 'scikit-image >=0.19', 'magicgui', 'imagecodecs', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# generate-dense-patches +42,Generate Dense Patches,0.0.2,2023-10-28,2023-10-28,generate-dense-patches,Aayush Bhatawadekar,asbhatawadekar@gmail.com,BSD-3-Clause,https://pypi.org/project/generate-dense-patches,A simple plugin to create a lot of training data from a 3D volume and mask,>=3.8,"['napari >=0.4.18', 'napari-plugin-engine >=0.2.0', 'numpy ==1.22', 'scikit-image >=0.19', 'magicgui', 'imagecodecs', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# generate-dense-patches [![License BSD-3](https://img.shields.io/pypi/l/generate-dense-patches.svg?color=green)](https://github.com/volume-em/generate-dense-patches/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/generate-dense-patches.svg?color=green)](https://pypi.org/project/generate-dense-patches) @@ -3518,7 +4118,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/volume-em/generate-dense-patches/issues', 'Documentation, https://github.com/volume-em/generate-dense-patches#README.md', 'Source Code, https://github.com/volume-em/generate-dense-patches', 'User Support, https://github.com/volume-em/generate-dense-patches/issues']",,,generate-dense-patches.make_patches_widget,,,,,https://pypi.org/project/generate-dense-patches,, -37,grabber-ift,0.2.2,2022-02-02,2023-06-18,grabber-ift,Jordão Bragantini,jordao.bragantini@gmail.com,MIT,https://github.com/LIDS-UNICAMP/grabber,A tool for contour-based segmentation correction (2D only).,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'pyift (>=0.0.4)', 'opencv-python-headless (>=4.4.0)', 'scipy (>=1.7.2)']","# Grabber: A Tool to Improve Convergence in Interactive Image Segmentation +43,grabber-ift,0.2.2,2022-02-02,2023-06-18,grabber-ift,Jordão Bragantini,jordao.bragantini@gmail.com,MIT,https://github.com/LIDS-UNICAMP/grabber,A tool for contour-based segmentation correction (2D only).,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'pyift (>=0.0.4)', 'opencv-python-headless (>=4.4.0)', 'scipy (>=1.7.2)']","# Grabber: A Tool to Improve Convergence in Interactive Image Segmentation [![License](https://img.shields.io/pypi/l/grabber.svg?color=green)](https://github.com/LIDS-UNICAMP/grabber/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/grabber.svg?color=green)](https://pypi.org/project/grabber) @@ -3604,7 +4204,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']",,,,grabber-ift.GrabberWidget,,,,,https://pypi.org/project/grabber-ift,https://github.com/LIDS-UNICAMP/grabber, -38,Guanine Crystal Analysis,0.0.2,2022-08-18,2023-06-05,guanine-crystal-analysis,Mara Lampert,mara_harriet.lampert@mailbox.tu-dresden.de,BSD-3-Clause,https://github.com/biapol/guanine-crystal-analysis,"A plugin for the guanine crystal segmentation, classification and characterization in the zebrafish eye",>=3.8,"['numpy', 'magicgui', 'qtpy', 'apoc', 'scikit-image', 'pandas', 'napari-simpleitk-image-processing', 'napari-skimage-regionprops', 'pyclesperanto-prototype', 'scikit-learn', 'napari-workflows', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# guanine-crystal-analysis +44,Guanine Crystal Analysis,0.0.2,2022-08-18,2023-06-05,guanine-crystal-analysis,Mara Lampert,mara_harriet.lampert@mailbox.tu-dresden.de,BSD-3-Clause,https://github.com/biapol/guanine-crystal-analysis,"A plugin for the guanine crystal segmentation, classification and characterization in the zebrafish eye",>=3.8,"['numpy', 'magicgui', 'qtpy', 'apoc', 'scikit-image', 'pandas', 'napari-simpleitk-image-processing', 'napari-skimage-regionprops', 'pyclesperanto-prototype', 'scikit-learn', 'napari-workflows', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# guanine-crystal-analysis [![License BSD-3](https://img.shields.io/pypi/l/guanine-crystal-analysis.svg?color=green)](https://github.com/biopo/guanine-crystal-analysis/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/guanine-crystal-analysis.svg?color=green)](https://pypi.org/project/guanine-crystal-analysis) @@ -3750,7 +4350,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/biapol/guanine-crystal-analysis/issues', 'Documentation, https://github.com/biapol/guanine-crystal-analysis#README.md', 'Source Code, https://github.com/biapol/guanine-crystal-analysis', 'User Support, https://github.com/biapol/guanine-crystal-analysis/issues']",,,guanine-crystal-analysis.normalization,guanine-crystal-analysis.make_sample_data,,,,https://pypi.org/project/guanine-crystal-analysis,https://github.com/biapol/guanine-crystal-analysis, -39,Hesperos application,0.2.1,2022-07-07,2023-07-25,hesperos,Charlotte Godard,charlotte.godard@pasteur.fr,BSD-3-Clause,https://github.com/chgodard/hesperos,A plugin to manually or semi-automatically segment medical data and correct previous segmentation data.,>=3.8,"['numpy', 'qtpy', 'tifffile', 'scikit-image', 'scikit-learn', 'SimpleITK', 'pandas', 'napari (<0.4.15)', 'napari-plugin-engine', 'imageio-ffmpeg', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","

+45,Hesperos application,0.2.1,2022-07-07,2023-07-25,hesperos,Charlotte Godard,charlotte.godard@pasteur.fr,BSD-3-Clause,https://github.com/chgodard/hesperos,A plugin to manually or semi-automatically segment medical data and correct previous segmentation data.,>=3.8,"['numpy', 'qtpy', 'tifffile', 'scikit-image', 'scikit-learn', 'SimpleITK', 'pandas', 'napari (<0.4.15)', 'napari-plugin-engine', 'imageio-ffmpeg', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","
# HESPEROS PLUGIN FOR NAPARI @@ -4026,12 +4626,12 @@ Distributed under the terms of the [BSD-3] license, **Hesperos** is a free and o [Anaconda]: https://www.anaconda.com/products/distribution#Downloads [VoxelLearning]: https://github.com/DecBayComp/VoxelLearning ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: MacOS :: MacOS X', 'Operating System :: Microsoft :: Windows', 'License :: OSI Approved :: BSD License']","['Documentation, https://github.com/chgodard/hesperos/blob/main/README.md', 'Source Code, https://github.com/chgodard/hesperos']",,,hesperos.make_manual_segmentation_widget,,,,,https://pypi.org/project/hesperos,https://github.com/chgodard/hesperos, -40,hipocount-napari,0.0.1,,,hipocount-napari,Borys Olifirov,omnia.fatum@gmail.com,MIT,,Quantitative analysis of immunofluorescence images of hippocampal slices,>=3.8,['napari'],"hipocount-napari +46,hipocount-napari,0.0.1,,,hipocount-napari,Borys Olifirov,omnia.fatum@gmail.com,MIT,,Quantitative analysis of immunofluorescence images of hippocampal slices,>=3.8,['napari'],"hipocount-napari ================ Quantitative analysis of immunofluorescence images of hippocampal slices ","['Framework :: napari', 'Development Status :: 3 - Alpha', 'License :: OSI Approved :: MIT License', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Operating System :: OS Independent', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Image Recognition', 'Topic :: Utilities']","['Documentation, https://github.com/wisstock/hipocount-napari', 'Source Code, https://github.com/wisstock/hipocount-napari', 'Bug Tracker, https://github.com/wisstock/hipocount-napari/issues', 'User Support, https://github.com/wisstock/hipocount-napari/issues']",,,hipocount-napari.stack_process_widget,,,,,https://pypi.org/project/hipocount-napari,, -41,iacs-ipac-reader,0.0.13,2022-02-11,2023-06-18,iacs-ipac-reader,Chenqi Zhang,cqzhang@g.ecc.u-tokyo.ac.jp,BSD-3-Clause,https://github.com/zcqwh/iacs_ipac_reader,A reader plugin for read iacs/ipac images and export .rtdc files.,>=3.7,"['h5py (>=3.5.0)', 'napari (>=0.4.12)', 'napari-plugin-engine (>=0.2.0)', 'numpy (>=1.21.4)', 'opencv-contrib-python-headless (>=4.4.0.46)', 'openpyxl (>=3.0.9)', 'sklearn (>=0.0)', 'PyQt5 (==5.12.3)', 'pandas (>=1.4.0)']","# iacs_ipac_reader +47,iacs-ipac-reader,0.0.13,2022-02-11,2023-06-18,iacs-ipac-reader,Chenqi Zhang,cqzhang@g.ecc.u-tokyo.ac.jp,BSD-3-Clause,https://github.com/zcqwh/iacs_ipac_reader,A reader plugin for read iacs/ipac images and export .rtdc files.,>=3.7,"['h5py (>=3.5.0)', 'napari (>=0.4.12)', 'napari-plugin-engine (>=0.2.0)', 'numpy (>=1.21.4)', 'opencv-contrib-python-headless (>=4.4.0.46)', 'openpyxl (>=3.0.9)', 'sklearn (>=0.0)', 'PyQt5 (==5.12.3)', 'pandas (>=1.4.0)']","# iacs_ipac_reader [![License](https://img.shields.io/pypi/l/iacs_ipac_reader.svg?color=green)](https://github.com/zcqwh/iacs_ipac_reader/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/iacs_ipac_reader.svg?color=green)](https://pypi.org/project/iacs_ipac_reader) @@ -4133,7 +4733,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/zcqwh/iacs_ipac_reader/issues', 'Documentation, https://github.com/zcqwh/iacs_ipac_reader#README.md', 'Source Code, https://github.com/zcqwh/iacs_ipac_reader', 'User Support, https://github.com/zcqwh/iacs_ipac_reader/issues']",,,iacs-ipac-reader.iacs_ipac_reader,,,,,https://pypi.org/project/iacs-ipac-reader,https://github.com/zcqwh/iacs_ipac_reader, -42,ilastik plugin for napari,0.2.4,2023-04-17,2023-07-25,ilastik-napari,Emil Melnikov,Emil Melnikov ,MIT,https://github.com/ilastik/ilastik-napari,ilastik plugin for napari,>=3.8,"['napari >=0.4.13', 'numpy >=1.20', 'qtpy', 'scikit-learn', 'sparse']","# ilastik-napari +48,ilastik plugin for napari,0.2.4,2023-04-17,2023-07-25,ilastik-napari,Emil Melnikov,Emil Melnikov ,MIT,https://github.com/ilastik/ilastik-napari,ilastik plugin for napari,>=3.8,"['napari >=0.4.13', 'numpy >=1.20', 'qtpy', 'scikit-learn', 'sparse']","# ilastik-napari [Napari][napari] plugin for interactive pixel classification. Designed to be similar to the pixel classification workflow in [classic ilastik][ilastik]. @@ -4234,7 +4834,7 @@ python -m twine upload --repository testpypi dist/* [napari-quickstart]: https://napari.org/tutorials/fundamentals/quick_start.html [napari-pyqt]: https://napari.org/stable/plugins/best_practices.html#don-t-include-pyside2-or-pyqt5-in-your-plugin-s-dependencies ","['Development Status :: 2 - Pre-Alpha', 'Environment :: Plugins', 'Intended Audience :: End Users/Desktop', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: MIT License', 'Framework :: napari', 'Operating System :: MacOS', 'Operating System :: MacOS :: MacOS X', 'Operating System :: Microsoft :: Windows', 'Operating System :: POSIX', 'Operating System :: POSIX :: Linux', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: Implementation :: CPython', 'Topic :: Scientific/Engineering', 'Topic :: Scientific/Engineering :: Image Processing']","['homepage, https://github.com/ilastik/ilastik-napari']",,,ilastik-napari.pixel_classification,,,,,https://pypi.org/project/ilastik-napari,https://github.com/ilastik/ilastik-napari, -43,Image-Composer,0.0.19,2022-02-10,2023-06-18,Image-Composer,"Marc Boucsein, Robin Koch",,BSD-3,https://github.com/MBPhys/Image-Composer,A napari plugin in order to compose a background image with a foreground image,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy']","# Image-Composer +49,Image-Composer,0.0.19,2022-02-10,2023-06-18,Image-Composer,"Marc Boucsein, Robin Koch",,BSD-3,https://github.com/MBPhys/Image-Composer,A napari plugin in order to compose a background image with a foreground image,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy']","# Image-Composer [![License](https://img.shields.io/pypi/l/napari-medical-image-formats.svg?color=green)](https://github.com/MBPhys/Image-Composer/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/Image-Composer.svg?color=green)](https://pypi.org/project/Image-Composer) @@ -4283,7 +4883,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']",,,,Image-Composer.Composer,,,,,https://pypi.org/project/Image-Composer,https://github.com/MBPhys/Image-Composer, -44,Image-Part-Selecter,0.0.7,2022-02-11,2023-06-18,Image-Part-Selecter,"Marc Boucsein, Robin Koch",,BSD-3,https://github.com/MBPhys/Image-Part-Selecter,A napari plugin in order to select parts of images,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy']","# Image-Part-Selecter +50,Image-Part-Selecter,0.0.7,2022-02-11,2023-06-18,Image-Part-Selecter,"Marc Boucsein, Robin Koch",,BSD-3,https://github.com/MBPhys/Image-Part-Selecter,A napari plugin in order to select parts of images,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy']","# Image-Part-Selecter [![License](https://img.shields.io/pypi/l/napari-medical-image-formats.svg?color=green)](https://github.com/MBPhys/Image-Part-Selecter/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/Image-Part-Selecter.svg?color=green)](https://pypi.org/project/Image-Part-Selecter) @@ -4332,7 +4932,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']",,,,Image-Part-Selecter.Selecter,,,,,https://pypi.org/project/Image-Part-Selecter,https://github.com/MBPhys/Image-Part-Selecter, -45,IMAXT Multiscale Image Napari Plugin,0.3.1,2023-04-17,2023-07-25,imaxt-multiscale-plugin,Eduardo Gonzalez Solares,E.GonzalezSolares@ast.cam.ac.uk,LGPL-3.0-only,https://gitlab.developers.cam.ac.uk/astronomy/camcead/imaxt/imaxt-multiscale-plugin,A simple plugin to use with napari,>=3.8,"['numpy', 'magicgui', 'qtpy', 'xarray', 'dask', 'astropy', 'zarr', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# IMAXT multiscale napari plugin +51,IMAXT Multiscale Image Napari Plugin,0.3.1,2023-04-17,2023-07-25,imaxt-multiscale-plugin,Eduardo Gonzalez Solares,E.GonzalezSolares@ast.cam.ac.uk,LGPL-3.0-only,https://gitlab.developers.cam.ac.uk/astronomy/camcead/imaxt/imaxt-multiscale-plugin,A simple plugin to use with napari,>=3.8,"['numpy', 'magicgui', 'qtpy', 'xarray', 'dask', 'astropy', 'zarr', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# IMAXT multiscale napari plugin [![License GNU LGPL v3.0](https://img.shields.io/pypi/l/imaxt-multiscale-plugin.svg?color=green)](https://github.com/eg266/imaxt-multiscale-plugin/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/imaxt-multiscale-plugin.svg?color=green)](https://pypi.org/project/imaxt-multiscale-plugin) @@ -4397,7 +4997,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU Lesser General Public License v3 (LGPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']",,imaxt-multiscale-plugin.get_reader,imaxt-multiscale-plugin.write_single_image,imaxt-multiscale-plugin.make_qwidget,,['*'],['.npy'],"['.tif', '.tiff']",https://pypi.org/project/imaxt-multiscale-plugin,,https://gitlab.developers.cam.ac.uk/astronomy/camcead/imaxt/imaxt-multiscale-plugin -46,In Silico Fate Mapping,0.1.2,2023-08-01,2024-04-10,in-silico-fate-mapping,Jordao Bragantini,jordao.bragantini@czbiohub.org,BSD-3-Clause,https://github.com/royerlab/in-silico-fate-mapping,TODO,>=3.8,"['numpy', 'pandas', 'scikit-learn', 'zarr', 'magicgui', 'qtpy', 'napari', 'click', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# in silico fate mapping +52,In Silico Fate Mapping,0.1.2,2023-08-01,2024-04-10,in-silico-fate-mapping,Jordao Bragantini,jordao.bragantini@czbiohub.org,BSD-3-Clause,https://github.com/royerlab/in-silico-fate-mapping,TODO,>=3.8,"['numpy', 'pandas', 'scikit-learn', 'zarr', 'magicgui', 'qtpy', 'napari', 'click', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# in silico fate mapping [![License BSD-3](https://img.shields.io/pypi/l/in-silico-fate-mapping.svg?color=green)](https://github.com/royerlab/in-silico-fate-mapping/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/in-silico-fate-mapping.svg?color=green)](https://pypi.org/project/in-silico-fate-mapping) @@ -4528,7 +5128,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/royerlab/in-silico-fate-mapping/issues', 'Documentation, https://github.com/royerlab/in-silico-fate-mapping#README.md', 'Source Code, https://github.com/royerlab/in-silico-fate-mapping', 'User Support, https://github.com/royerlab/in-silico-fate-mapping/issues']",in-silico-fate-mapping.get_reader,in-silico-fate-mapping.write_tracks,in-silico-fate-mapping.make_fate_map,,['*.csv'],['.csv'],,https://pypi.org/project/in-silico-fate-mapping,https://github.com/royerlab/in-silico-fate-mapping, -47,iterseg,0.3.0,,,iterseg,Abigail S McGovern & Juan Nunez-Iglesias,Abigail.McGovern1@monash.edu,BSD-3-Clause,,napari plugin for iteratively improving unet-watershed segmentation,>=3.7,"['numpy', 'dask', 'torch', 'scikit-image', 'pandas', 'ome-zarr', 'zarr', 'matplotlib', 'napari', 'umetrix', 'numba', 'scipy', 'seaborn']","# iterseg +53,iterseg,0.3.0,,,iterseg,Abigail S McGovern & Juan Nunez-Iglesias,Abigail.McGovern1@monash.edu,BSD-3-Clause,,napari plugin for iteratively improving unet-watershed segmentation,>=3.7,"['numpy', 'dask', 'torch', 'scikit-image', 'pandas', 'ome-zarr', 'zarr', 'matplotlib', 'napari', 'umetrix', 'numba', 'scipy', 'seaborn']","# iterseg [![License](https://img.shields.io/pypi/l/iterseg.svg?color=green)](https://github.com/abigailmcgovern/iterseg/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/iterseg.svg?color=green)](https://pypi.org/project/iterseg) @@ -4665,7 +5265,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/abigailmcgovern/iterseg/issues', 'Documentation, https://github.com/abigailmcgovern/iterseg#README.md', 'Source Code, https://github.com/abigailmcgovern/iterseg', 'User Support, https://github.com/abigailmcgovern/iterseg/issues']",iterseg.load_ome_zarr,,iterseg.train_from_viewer,,['*.ome.zarr'],,,https://pypi.org/project/iterseg,, -48,Koopa,0.0.5,2022-10-25,2023-06-18,koopa-viz,Bastian Eichenberger,bastian@eichenbergers.ch,MIT,https://github.com/bbquercus/koopa-viz,Vizualization plugin for koopa image analysis,>=3.8,"['numpy', 'pandas', 'pyarrow', 'qtpy', 'tifffile', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","[![License MIT](https://img.shields.io/pypi/l/koopa-viz.svg?color=green)](https://github.com/bbquercus/koopa/raw/main/LICENSE) +54,Koopa,0.0.5,2022-10-25,2023-06-18,koopa-viz,Bastian Eichenberger,bastian@eichenbergers.ch,MIT,https://github.com/bbquercus/koopa-viz,Vizualization plugin for koopa image analysis,>=3.8,"['numpy', 'pandas', 'pyarrow', 'qtpy', 'tifffile', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","[![License MIT](https://img.shields.io/pypi/l/koopa-viz.svg?color=green)](https://github.com/bbquercus/koopa/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/koopa-viz.svg?color=green)](https://pypi.org/project/koopa-viz) [![Python Version](https://img.shields.io/pypi/pyversions/koopa-viz.svg?color=green)](https://python.org) [![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/koopa-viz)](https://napari-hub.org/plugins/koopa-viz) @@ -4688,7 +5288,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [@napari]: https://github.com/napari [file an issue]: https://github.com/bbquercus/koopa/issues ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/bbquercus/koopa/issues', 'Documentation, https://github.com/bbquercus/koopa#README.md', 'Source Code, https://github.com/bbquercus/koopa', 'User Support, https://github.com/bbquercus/koopa/issues']",,,koopa-viz.make_qwidget,,,,,https://pypi.org/project/koopa-viz,https://github.com/bbquercus/koopa-viz, -49,Label-Creator,0.0.9,2022-02-11,2023-06-18,Label-Creator,"Marc Boucsein, Robin Koch",,BSD-3,https://github.com/MBPhys/Label-Creator,A napari plugin for generation of Label-Layers according to selected image data shapes,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'dask']","# Label-Creator +55,Label-Creator,0.0.9,2022-02-11,2023-06-18,Label-Creator,"Marc Boucsein, Robin Koch",,BSD-3,https://github.com/MBPhys/Label-Creator,A napari plugin for generation of Label-Layers according to selected image data shapes,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'dask']","# Label-Creator [![License](https://img.shields.io/pypi/l/napari-medical-image-formats.svg?color=green)](https://github.com/MBPhys/Label-Creator/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/Label-Creator.svg?color=green)](https://pypi.org/project/Label-Creator) @@ -4737,7 +5337,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']",,,,Label-Creator.Creator,,,,,https://pypi.org/project/Label-Creator,https://github.com/MBPhys/Label-Creator, -50,Large Image Viewer,1.1.0,2023-11-18,2023-11-18,Large-Image-Viewer,Nima Mojtahedi,nima.mojtahedi@wysscenter.ch,MIT,https://pypi.org/project/Large-Image-Viewer,A simple plugin to view large images,>=3.8,"['numpy', 'dask[array]', 'dask-image', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# Large-Image-Viewer +56,Large Image Viewer,1.1.0,2023-11-18,2023-11-18,Large-Image-Viewer,Nima Mojtahedi,nima.mojtahedi@wysscenter.ch,MIT,https://pypi.org/project/Large-Image-Viewer,A simple plugin to view large images,>=3.8,"['numpy', 'dask[array]', 'dask-image', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# Large-Image-Viewer [![License MIT](https://img.shields.io/pypi/l/Large-Image-Viewer.svg?color=green)](https://github.com/WyssCenter/Large-Image-Viewer/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/Large-Image-Viewer.svg?color=green)](https://pypi.org/project/Large-Image-Viewer) @@ -4867,7 +5467,7 @@ This plugin is licensed under the [MIT License](LICENSE). For any inquiries or questions, you can reach out to the author at nima.mojtahedi@wysscenter.ch ","['Development Status :: 3 - Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/WyssCenter/Large-Image-Viewer/issues', 'Documentation, https://github.com/WyssCenter/Large-Image-Viewer#README.md', 'Source Code, https://github.com/WyssCenter/Large-Image-Viewer', 'User Support, https://github.com/WyssCenter/Large-Image-Viewer/issues']",Large-Image-Viewer.get_reader,,,,"['*.tiff', '*.tif']",,,https://pypi.org/project/Large-Image-Viewer,, -51,Layer-Data-Replace,0.0.5,2022-02-11,2023-06-18,Layer-Data-Replace,"Marc Boucsein, Robin Koch",,BSD-3,https://github.com/MBPhys/Layer-Data-Replace,A napari plugin in order to replace parts of the data of a layer by another one,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'dask']","# Layer-Data-Replace +57,Layer-Data-Replace,0.0.5,2022-02-11,2023-06-18,Layer-Data-Replace,"Marc Boucsein, Robin Koch",,BSD-3,https://github.com/MBPhys/Layer-Data-Replace,A napari plugin in order to replace parts of the data of a layer by another one,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'dask']","# Layer-Data-Replace [![License](https://img.shields.io/pypi/l/napari-medical-image-formats.svg?color=green)](https://github.com/MBPhys/Layer-Data-Replace/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/Layer-Data-Replace.svg?color=green)](https://pypi.org/project/Layer-Data-Replace) @@ -4916,7 +5516,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']",,,,Layer-Data-Replace.Replace,,,,,https://pypi.org/project/Layer-Data-Replace,https://github.com/MBPhys/Layer-Data-Replace, -52,Manini,0.0.11,,,manini,Herearii Metuarea,herearii.metuarea@gmail.com,BSD-3-Clause,,"An user-friendly plugin that enables to annotate images from a pre-trained model (segmentation, classification, detection) given by an user.",>=3.8,"['numpy', 'magicgui', 'qtpy', 'napari', 'scikit-image', 'pandas', 'opencv-python-headless', 'tensorflow', 'PyQt5', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""', 'pytest-xvfb; extra == ""testing""', 'numpy; extra == ""testing""', 'magicgui; extra == ""testing""', 'qtpy; extra == ""testing""', 'scikit-image; extra == ""testing""', 'pandas; extra == ""testing""', 'opencv-python-headless; extra == ""testing""', 'tensorflow; extra == ""testing""']","# manini +58,Manini,0.0.11,,,manini,Herearii Metuarea,herearii.metuarea@gmail.com,BSD-3-Clause,,"An user-friendly plugin that enables to annotate images from a pre-trained model (segmentation, classification, detection) given by an user.",>=3.8,"['numpy', 'magicgui', 'qtpy', 'napari', 'scikit-image', 'pandas', 'opencv-python-headless', 'tensorflow', 'PyQt5', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""', 'pytest-xvfb; extra == ""testing""', 'numpy; extra == ""testing""', 'magicgui; extra == ""testing""', 'qtpy; extra == ""testing""', 'scikit-image; extra == ""testing""', 'pandas; extra == ""testing""', 'opencv-python-headless; extra == ""testing""', 'tensorflow; extra == ""testing""']","# manini [![License BSD-3](https://img.shields.io/pypi/l/manini.svg?color=green)](https://github.com/hereariim/manini/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/manini.svg?color=green)](https://pypi.org/project/manini) @@ -5061,7 +5661,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/hereariim/manini/issues', 'Documentation, https://github.com/hereariim/manini#README.md', 'Source Code, https://github.com/hereariim/manini', 'User Support, https://github.com/hereariim/manini/issues']",,,manini.manini_widget,,,,,https://pypi.org/project/manini,, -53,microscope-napari,0.0.4,,,microscope-napari,Nanobiosensorics,horvath.robert@energia.mta.hu,BSD-3,,Nanobiosensorics microscopic napari plugin.,>=3.7,"['napari', 'napari-plugin-engine >=0.1.4', 'cellpose >0.6.3', 'imagecodecs', ""sphinx >=3.0 ; extra == 'docs'"", ""sphinxcontrib-apidoc ; extra == 'docs'"", ""sphinx-rtd-theme ; extra == 'docs'"", ""sphinx-prompt ; extra == 'docs'"", ""sphinx-autodoc-typehints ; extra == 'docs'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# Installation +59,microscope-napari,0.0.5,,,microscope-napari,Nanobiosensorics,horvath.robert@energia.mta.hu,BSD-3,,Nanobiosensorics microscopic napari plugin.,>=3.7,"['napari', 'napari-plugin-engine>=0.1.4', 'cellpose>0.6.3', 'imagecodecs', 'sphinx>=3.0; extra == ""docs""', 'sphinxcontrib-apidoc; extra == ""docs""', 'sphinx-rtd-theme; extra == ""docs""', 'sphinx-prompt; extra == ""docs""', 'sphinx-autodoc-typehints; extra == ""docs""', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# Installation Napari needs to be set up on your machine in order to install this plugin. @@ -5094,7 +5694,7 @@ Images can be segmented with custom and built-in cellpose models. ![kép](https://github.com/Nanobiosensorics/microscope-napari/assets/65455148/82d300b9-c523-4b0a-bf44-0f3bfdadae07) -For further information make sure to check out ![cellpose](https://github.com/MouseLand/cellpose) and ![cellpose-napari](https://github.com/MouseLand/cellpose-napari) plugin. +For further information make sure to check out [cellpose](https://github.com/MouseLand/cellpose) and [cellpose-napari](https://github.com/MouseLand/cellpose-napari) plugin. ## Cell counting @@ -5106,24 +5706,25 @@ Any number of napari image layers can be selected to be evaluated. Without enabling regression model counting the default used method is cellpose segmenting. The lower settings are for cellpose only. -Cell outlines can be output to verify the accuracy of results. +Cell masks can be output to verify the accuracy of results. Our custom cellpose models can be accessed [there](https://drive.google.com/drive/folders/1-2SRK_AIlcSODebPoigKA7kbn5cb5s2o?usp=sharing). -![kép](https://github.com/Nanobiosensorics/microscope-napari/assets/65455148/4b380ad4-bb7a-46a3-a821-fd7386bdd959) +![kép](https://github.com/user-attachments/assets/00d1336f-eeb4-4074-87a6-70d9cd866c07) ### Average intensity regression model For these models we should enable the regression model counting feature. -The lower settings are irrelevant now, cell outlines will not be output. +The lower settings are irrelevant now, cell masks will not be output. It is only used for counting cells in images. Our regression models can be accessed [there](https://drive.google.com/drive/folders/1-5uAXN1W5lbE2Pw6Tsa1lR5BYqmPgdEP?usp=sharing). -![kép](https://github.com/Nanobiosensorics/microscope-napari/assets/65455148/3b256da5-7eca-4d4a-a075-175502fbfb1e) +![kép](https://github.com/user-attachments/assets/7d733347-ceed-4780-9bea-154c8faf3d4d) + ","['Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License', 'Framework :: napari']",,,,microscope-napari.widgets.segmentation,microscope-napari.samples.rgb_3D,,,,https://pypi.org/project/microscope-napari,, -54,midi-app-controller,0.0.12,,,midi-app-controller,,,,,Control napari with a MIDI controller.,>=3.9,"['napari[all] >=0.4.19', 'python-rtmidi >=1.5.8', 'pyyaml >=6.0.1', 'pydantic >=2.7.1', 'appdirs >=1.4.4', 'qtpy >=2.4.1', 'superqt >=0.6.5', ""midi-app-controller[testing] ; extra == 'dev'"", ""pre-commit >=3.7.0 ; extra == 'dev'"", ""pytest >=8.2.0 ; extra == 'testing'"", ""pytest-cov >=5.0.0 ; extra == 'testing'"", ""pytest-qt >=4.0.2 ; extra == 'testing'""]","# midi-app-controller +60,midi-app-controller,0.1.1,,,midi-app-controller,,,,,Control napari with a MIDI controller.,>=3.9,"['napari>=0.4.19', 'python-rtmidi>=1.5.8', 'pyyaml>=6.0.1', 'pydantic>=2.7.1', 'appdirs>=1.4.4', 'qtpy>=2.4.1', 'superqt>=0.6.5', 'midi-app-controller[testing]; extra == ""dev""', 'pre-commit>=3.7.0; extra == ""dev""', 'pytest>=8.2.0; extra == ""testing""', 'pytest-cov>=5.0.0; extra == ""testing""', 'pytest-qt>=4.0.2; extra == ""testing""', 'napari[all]; extra == ""testing""', 'flexparser!=0.4.0; extra == ""testing""']","# midi-app-controller [![codecov](https://codecov.io/gh/midi-app-controller/midi-app-controller/graph/badge.svg?token=YALMD0PQ80)](https://codecov.io/gh/midi-app-controller/midi-app-controller) [![Documentation Status](https://readthedocs.org/projects/midi-app-controller/badge/?version=latest)](https://midi-app-controller.readthedocs.io/en/latest/?badge=latest) @@ -5219,7 +5820,7 @@ python3 -m pip install -e .[dev] pre-commit install ``` ","['Framework :: napari', 'License :: OSI Approved :: BSD License', 'Programming Language :: Python']","['Source Code, https://github.com/midi-app-controller/midi-app-controller', 'Documentation, https://midi-app-controller.readthedocs.io']",,,midi-app-controller.midi_status,,,,,https://pypi.org/project/midi-app-controller,, -55,Mikro Napari,0.1.63,,,mikro-napari,jhnnsrs,jhnnsrs@gmail.com,CC BY-NC 3.0,,A napari plugin to interact with and provide functionality for a connected arkitekt server,">=3.8,<=3.12","['arkitekt[fluss,mikro,reaktion,rekuest,unlok] (>=0.5.58)']","# mikro-napari +61,Mikro Napari,0.1.63,,,mikro-napari,jhnnsrs,jhnnsrs@gmail.com,CC BY-NC 3.0,,A napari plugin to interact with and provide functionality for a connected arkitekt server,">=3.8,<=3.12","['arkitekt[fluss,mikro,reaktion,rekuest,unlok] (>=0.5.58)']","# mikro-napari [![codecov](https://codecov.io/gh/jhnnsrs/mikro-napari/branch/master/graph/badge.svg?token=UGXEA2THBV)](https://codecov.io/gh/jhnnsrs/mikro-napari) [![PyPI version](https://badge.fury.io/py/mikro-napari.svg)](https://pypi.org/project/mikro-napari/) @@ -5251,7 +5852,7 @@ pip install mikro-napari napari[pyqt5] ","['Framework :: napari', 'License :: Other/Proprietary License', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11']","['Repository, https://github.com/jhnnsrs/mikro-napari']",,,mikro-napari.arkitekt_widget,,,,,https://pypi.org/project/mikro-napari,, -56,misic-napari,0.2.3,2022-02-11,2023-06-18,misic-napari,"S. Panigrahi & L. Espinosa, IAM, LCB",spanigrahi@imm.cnrs.fr,MIT,https://github.com/pswapnesh/MiSiC,Segmentation of bacteria agnostic to imaging modality,>=3.6,"['tensorflow', 'termcolor']","# misic-napari +62,misic-napari,0.2.3,2022-02-11,2023-06-18,misic-napari,"S. Panigrahi & L. Espinosa, IAM, LCB",spanigrahi@imm.cnrs.fr,MIT,https://github.com/pswapnesh/MiSiC,Segmentation of bacteria agnostic to imaging modality,>=3.6,"['tensorflow', 'termcolor']","# misic-napari +94,napari-arboretum,0.1.2,2022-02-10,2023-07-28,napari-arboretum,Alan R. Lowe,"""Alan R. Lowe"" ",,https://github.com/quantumjot/arboretum,Track graph and lineage tree visualization with napari,>=3.8,"['matplotlib', 'napari-matplotlib (>=0.2.1)', 'napari (>=0.4.0)', 'numpy (>=1.17.3)', 'pandas', 'pooch (>=1)', 'qtpy', 'scikit-image', 'vispy']"," [![License](https://img.shields.io/pypi/l/napari-arboretum.svg?color=green)](https://github.com/lowe-lab-ucl/arboretum/blob/main/LICENSE.md) [![PyPI](https://img.shields.io/pypi/v/napari-arboretum.svg?color=green)](https://pypi.org/project/napari-arboretum) @@ -8757,7 +9359,7 @@ https://napari.org/stable/api/napari.layers.Tracks.html To view the legacy version of this plugin, visit the legacy branch: https://github.com/quantumjot/arboretum/tree/v1-legacy ","['Development Status :: 4 - Beta', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python', 'Topic :: Scientific/Engineering :: Visualization']","['homepage, https://github.com/lowe-lab-ucl/arboretum']",,,napari-arboretum.Arboretum,,,,,https://pypi.org/project/napari-arboretum,https://github.com/quantumjot/arboretum, -88,Dioptic ARGOS Archive Reader,0.0.7,,,napari-argos-archive-reader,Volker Hilsenstein,hilsenstein@dioptic.de,MIT,,A plugin to read Dioptic ARGOS archive files,>=3.9,"['napari', 'numpy', 'scikit-image', 'pydantic', 'ruamel.yaml', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-argos-archive-reader +95,Dioptic ARGOS Archive Reader,0.0.7,,,napari-argos-archive-reader,Volker Hilsenstein,hilsenstein@dioptic.de,MIT,,A plugin to read Dioptic ARGOS archive files,>=3.9,"['napari', 'numpy', 'scikit-image', 'pydantic', 'ruamel.yaml', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-argos-archive-reader [![License MIT](https://img.shields.io/pypi/l/napari-argos-archive-reader.svg?color=green)](https://github.com/dioptic/napari-argos-archive-reader/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-argos-archive-reader.svg?color=green)](https://pypi.org/project/napari-argos-archive-reader) @@ -8846,7 +9448,7 @@ Distributed under the terms of the [MIT] license, [MIT]: http://opensource.org/licenses/MIT [pip]: https://pypi.org/project/pip/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/dioptic/napari-argos-archive-reader/issues', 'Documentation, https://github.com/dioptic/napari-argos-archive-reader#README.md', 'Source Code, https://github.com/dioptic/napari-argos-archive-reader', 'User Support, https://github.com/dioptic/napari-argos-archive-reader/issues']",napari-argos-archive-reader.get_reader,,,,['*.zip'],,,https://pypi.org/project/napari-argos-archive-reader,, -89,napari-assistant,0.4.8,2022-03-09,2024-09-30,napari-assistant,"Robert Haase, Ryan Savill",robert.haase@tu-dresden.de,BSD-3-Clause,https://github.com/haesleinhuepf/napari-assistant,A pocket calculator like interface to image processing in napari,>=3.8,"['napari-plugin-engine>=0.1.4', 'toolz', 'napari>=0.4.14', 'magicgui', 'numpy!=1.19.4', 'pyperclip', 'loguru', 'jupytext', 'jupyter', 'pandas', 'napari-time-slicer>=0.4.8', 'napari-workflows>=0.2.10']","# napari-assistant +96,napari-assistant,0.4.10,2022-03-09,2024-12-21,napari-assistant,"Robert Haase, Ryan Savill",robert.haase@tu-dresden.de,BSD-3-Clause,https://github.com/haesleinhuepf/napari-assistant,A pocket calculator like interface to image processing in napari,>=3.8,"['napari-plugin-engine>=0.1.4', 'toolz', 'napari>=0.4.14', 'magicgui', 'numpy!=1.19.4', 'pyperclip', 'loguru', 'jupytext', 'jupyter', 'pandas', 'napari-time-slicer>=0.4.8', 'napari-workflows>=0.2.10']","# napari-assistant [![License](https://img.shields.io/pypi/l/napari-assistant.svg?color=green)](https://github.com/haesleinhuepf/napari-assistant/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-assistant.svg?color=green)](https://pypi.org/project/napari-assistant) [![Python Version](https://img.shields.io/pypi/pyversions/napari-assistant.svg?color=green)](https://python.org) @@ -8971,7 +9573,7 @@ This project has been made possible in part by grant number [2021-240341 (Napari [BSD-3]: http://opensource.org/licenses/BSD-3-Clause ","['Framework :: napari', 'License :: OSI Approved :: BSD License', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent']","['Bug Tracker, https://github.com/haesleinhuepf/napari-assistant/issues', 'Documentation, https://github.com/haesleinhuepf/napari-assistant/', 'Source Code, https://github.com/haesleinhuepf/napari-assistant', 'User Support, https://forum.image.sc/']",,,napari-assistant.Assistant,,,,,https://pypi.org/project/napari-assistant,https://github.com/haesleinhuepf/napari-assistant, -90,BacSEG,1.1.1,,,napari-bacseg,Piers Turner,Piers Turner ,,,"Bacterial segmentation and analysis platform than can inport/export files in multiple formats. Integrating many tools such as Cellpose, ColiCoords, Oufti/MicrobeTracker.",>=3.9,"['napari[all] ==0.5.0', 'torch', 'cellpose >=3.0.1', 'opencv-python', 'picassosr ==0.6.5', 'bactfit >=0.1.6', 'numpy', 'pyqt5', 'pyqt6', 'qtpy', 'scipy', 'natsort', 'tqdm', 'imagecodecs', 'tifffile', 'pandas', 'mat4py', 'glob2', 'matplotlib', 'scikit-image', 'roifile', 'openpyxl', 'shapely', 'colicoords', 'psutil', 'xmltodict', 'astropy', 'tiler', 'imageio-ffmpeg', 'aicspylibczi', 'czifile', 'omnipose', 'h5py', 'pyqtgraph', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-BacSEG +97,BacSEG,1.1.2,,,napari-bacseg,Piers Turner,Piers Turner ,,,"Bacterial segmentation and analysis platform than can inport/export files in multiple formats. Integrating many tools such as Cellpose, ColiCoords, Oufti/MicrobeTracker.",>=3.9,"['napari[all]==0.5.0', 'torch', 'torchvision', 'cellpose==3.0.1', 'opencv-python', 'picassosr==0.7.3', 'bactfit>=0.1.6', 'numpy', 'pyqt5', 'pyqt6', 'qtpy', 'scipy', 'natsort', 'tqdm', 'imagecodecs', 'tifffile', 'pandas', 'mat4py', 'glob2', 'matplotlib', 'scikit-image', 'roifile', 'openpyxl', 'shapely', 'colicoords', 'psutil', 'xmltodict', 'astropy', 'tiler', 'imageio-ffmpeg', 'aicspylibczi', 'czifile', 'omnipose', 'h5py', 'pyqtgraph', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# napari-BacSEG [![License BSD-3](https://img.shields.io/pypi/l/napari-bacseg.svg?color=green)](https://github.com/piedrro/napari-bacseg/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-bacseg.svg?color=green)](https://pypi.org/project/napari-bacseg) @@ -9067,7 +9669,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Framework :: napari', 'Environment :: Plugins', 'License :: OSI Approved :: BSD License', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent']","['Homepage, https://github.com/piedrro/napari-bacseg', 'Bug Tracker, https://github.com/piedrro/napari-bacseg/issues']",,,napari-bacseg.make_qwidget,,,,,https://pypi.org/project/napari-bacseg,, -91,BaSiCpy shadow correction in napari,0.0.3,,,napari-basicpy,Tim Morello,tdmorello@gmail.com,BSD-3-Clause,,BaSiCPy illumination correction for napari,>=3.8,"['basicpy >=1.2.0', 'numpy', 'qtpy', ""black ; extra == 'dev'"", ""flake8 ; extra == 'dev'"", ""flake8-black ; extra == 'dev'"", ""flake8-docstrings ; extra == 'dev'"", ""flake8-isort ; extra == 'dev'"", ""isort ; extra == 'dev'"", ""mypy ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""pydocstyle ; extra == 'dev'"", ""pytest ; extra == 'dev'"", ""pytest-qt ; extra == 'dev'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""tox ; extra == 'tox-testing'"", ""pytest ; extra == 'tox-testing'"", ""pytest-cov ; extra == 'tox-testing'"", ""pytest-qt ; extra == 'tox-testing'"", ""napari ; extra == 'tox-testing'"", ""pyqt5 ; extra == 'tox-testing'""]","# napari-basicpy +98,BaSiCpy shadow correction in napari,0.0.3,,,napari-basicpy,Tim Morello,tdmorello@gmail.com,BSD-3-Clause,,BaSiCPy illumination correction for napari,>=3.8,"['basicpy >=1.2.0', 'numpy', 'qtpy', ""black ; extra == 'dev'"", ""flake8 ; extra == 'dev'"", ""flake8-black ; extra == 'dev'"", ""flake8-docstrings ; extra == 'dev'"", ""flake8-isort ; extra == 'dev'"", ""isort ; extra == 'dev'"", ""mypy ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""pydocstyle ; extra == 'dev'"", ""pytest ; extra == 'dev'"", ""pytest-qt ; extra == 'dev'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""tox ; extra == 'tox-testing'"", ""pytest ; extra == 'tox-testing'"", ""pytest-cov ; extra == 'tox-testing'"", ""pytest-qt ; extra == 'tox-testing'"", ""napari ; extra == 'tox-testing'"", ""pyqt5 ; extra == 'tox-testing'""]","# napari-basicpy [![License](https://img.shields.io/pypi/l/napari-basicpy.svg?color=green)](https://github.com/tdmorello/napari-basicpy/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-basicpy.svg?color=green)](https://pypi.org/project/napari-basicpy) @@ -9155,7 +9757,7 @@ If you encounter any problems, please [file an issue](https://github.com/peng-la [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/peng-lab/napari-basicpy/issues', 'Documentation, https://github.com/peng-lab/napari-basicpy#README.md', 'Source Code, https://github.com/peng-lab/napari-basicpy', 'User Support, https://github.com/peng-lab/napari-basicpy/issues']",,,napari-basicpy.shadow_correction,napari-basicpy.sample_data_random,,,,https://pypi.org/project/napari-basicpy,, -92,Bounding Box,0.0.8,2023-04-12,2023-07-28,napari-bbox,David Bauer,dbauer@brc.hu,BSD-3-Clause,https://github.com/bauerdavid/napari-bbox,A new layer for bounding boxes in 2+ dimensions,>=3.9,"['numpy', 'magicgui', 'qtpy', 'napari>=0.4.15', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# napari-bbox +99,Bounding Box,0.0.8,2023-04-12,2023-07-28,napari-bbox,David Bauer,dbauer@brc.hu,BSD-3-Clause,https://github.com/bauerdavid/napari-bbox,A new layer for bounding boxes in 2+ dimensions,>=3.9,"['numpy', 'magicgui', 'qtpy', 'napari>=0.4.15', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# napari-bbox [![License BSD-3](https://img.shields.io/pypi/l/napari-bbox.svg?color=green)](https://github.com/bauerdavid/napari-bbox/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-bbox.svg?color=green)](https://pypi.org/project/napari-bbox) @@ -9232,7 +9834,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/bauerdavid/napari-bbox/issues', 'Documentation, https://github.com/bauerdavid/napari-bbox#README.md', 'Source Code, https://github.com/bauerdavid/napari-bbox', 'User Support, https://github.com/bauerdavid/napari-bbox/issues']",napari-bbox.get_reader,,napari-bbox.create_bounding_box_layer_widget,,['*.csv'],,,https://pypi.org/project/napari-bbox,https://github.com/bauerdavid/napari-bbox, -93,Bee annotator,0.0.1,,,napari-bee-annotator,Florian Aymanns,florian.aymanns@epfl.ch,BSD-3-Clause,,Napari plugin for the annotation of bee entering and leaving the hive.,>=3.8,"['numpy', 'magicgui', 'qtpy', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]"," +100,Bee annotator,0.0.1,,,napari-bee-annotator,Florian Aymanns,florian.aymanns@epfl.ch,BSD-3-Clause,,Napari plugin for the annotation of bee entering and leaving the hive.,>=3.8,"['numpy', 'magicgui', 'qtpy', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]"," # napari-bee-annotator @@ -9300,7 +9902,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/EPFL-Center-for-Imaging/napari-bee-annotator/issues', 'Documentation, https://github.com/EPFL-Center-for-Imaging/napari-bee-annotator#README.md', 'Source Code, https://github.com/EPFL-Center-for-Imaging/napari-bee-annotator', 'User Support, https://github.com/EPFL-Center-for-Imaging/napari-bee-annotator/issues']",napari-bee-annotator.get_reader,napari-bee-annotator.write_single_tracks_layer,napari-bee-annotator.make_container_widget,,['*.csv'],['.csv'],,https://pypi.org/project/napari-bee-annotator,, -94,Bfio,0.0.4,2023-10-28,2023-10-28,napari-bfio,Sameeul B Samee,sameeul.samee@nih.gov,MIT,https://pypi.org/project/napari-bfio,A plugin to read and write images using bfio within napari,>=3.8,"['numpy', 'bfio >=2.3.1', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-bfio +101,Bfio,0.0.4,2023-10-28,2023-10-28,napari-bfio,Sameeul B Samee,sameeul.samee@nih.gov,MIT,https://pypi.org/project/napari-bfio,A plugin to read and write images using bfio within napari,>=3.8,"['numpy', 'bfio >=2.3.1', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-bfio [![License MIT](https://img.shields.io/pypi/l/napari-bfio.svg?color=green)](https://github.com/PolusAI/napari-bfio/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-bfio.svg?color=green)](https://pypi.org/project/napari-bfio) @@ -9368,7 +9970,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/PolusAI/napari-bfio/issues', 'Documentation, https://github.com/PolusAI/napari-bfio#README.md', 'Source Code, https://github.com/PolusAI/napari-bfio', 'User Support, https://github.com/PolusAI/napari-bfio/issues']",napari-bfio.get_reader,napari-bfio.write_single_image,,,"['*.ome.tiff', '*.ome.tif', '*.ome.zarr', '*.tiff', '*.1sc', '*.2fl', '*.acff', '*.afi', '*.afm', '*.aim', '*.al3d', '*.ali', '*.am', '*.amiramesh', '*.apl', '*.arf', '*.avi', '*.bif', '*.bin', '*.bip', '*.bmp', '*.btf', '*.c01', '*.cfg', '*.ch5', '*.cif', '*.cr2', '*.crw', '*.cxd', '*.dat', '*.db', '*.dcm', '*.dib', '*.dicom', '*.dm2', '*.dm3', '*.dm4', '*.dti', '*.dv', '*.eps', '*.epsi', '*.exp', '*.fdf', '*.fff', '*.ffr', '*.fits', '*.flex', '*.fli', '*.frm', '*.gel', '*.gif', '*.grey', '*.h5', '*.hdf', '*.hdr', '*.hed', '*.his', '*.htd', '*.hx', '*.i2i', '*.ics', '*.ids', '*.im3', '*.img', '*.img', '*.ims', '*.inr', '*.ipl', '*.ipm', '*.ipw', '*.j2k', '*.jp2', '*.jpeg', '*.jpf', '*.jpg', '*.jpk', '*.jpx', '*.klb', '*.l2d', '*.labels', '*.lei', '*.lif', '*.liff', '*.lim', '*.lms', '*.lof', '*.lsm', '*.map', '*.mdb', '*.mea', '*.mnc', '*.mng', '*.mod', '*.mov', '*.mrc', '*.mrcs', '*.mrw', '*.msr', '*.mtb', '*.mvd2', '*.naf', '*.nd', '*.nd2', '*.ndpi', '*.ndpis', '*.nef', '*.nhdr', '*.nii', '*.nii.gz', '*.nrrd', '*.obf', '*.obsep', '*.oib', '*.oif', '*.oir', '*.omp2info', '*.par', '*.pbm', '*.pcoraw', '*.pcx', '*.pds', '*.pgm', '*.pic', '*.pict', '*.png', '*.pnl', '*.ppm', '*.pr3', '*.ps', '*.psd', '*.qptiff', '*.r3d', '*.raw', '*.rcpnl', '*.rec', '*.res', '*.scn', '*.sdt', '*.seq', '*.sif', '*.sld', '*.sldy', '*.sm2', '*.sm3', '*.spc', '*.spe', '*.spi', '*.st', '*.stk', '*.stp', '*.svs', '*.sxm', '*.tf2', '*.tf8', '*.tfr', '*.tga', '*.tif', '*.tif', '*.tiff', '*.tnb', '*.top', '*.txt', '*.v', '*.vff', '*.vms', '*.vsi', '*.vws', '*.wat', '*.wpi', '*.xdce', '*.xlef', '*.xqd', '*.xqf', '*.xv', '*.xys', '*.zfp', '*.zfr', '*.zvi']","['.ome.tiff', '.ome.tif', '.ome.zarr']","['.ome.tiff', '.ome.tif', '.ome.zarr']",https://pypi.org/project/napari-bfio,, -95,BigFISH smFISH Analysis,0.4,2023-04-17,2023-06-18,napari-bigfish,Volker Baecker,volker.baecker@mri.cnrs.fr,MIT,https://github.com/MontpellierRessourcesImagerie/napari-bigfish,A napari-plugin providing an alternative GUI for Big-FISH. Big-FISH is a python package for the analysis of smFISH images.,>=3.8,"['numpy', 'magicgui', 'qtpy', 'pyperclip', 'big-fish', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]"," # napari-bigfish +102,BigFISH smFISH Analysis,0.4,2023-04-17,2023-06-18,napari-bigfish,Volker Baecker,volker.baecker@mri.cnrs.fr,MIT,https://github.com/MontpellierRessourcesImagerie/napari-bigfish,A napari-plugin providing an alternative GUI for Big-FISH. Big-FISH is a python package for the analysis of smFISH images.,>=3.8,"['numpy', 'magicgui', 'qtpy', 'pyperclip', 'big-fish', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]"," # napari-bigfish [![License MIT](https://img.shields.io/pypi/l/napari-bigfish.svg?color=green)](https://github.com/MontpellierRessourcesImagerie/napari-bigfish/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-bigfish.svg?color=green)](https://pypi.org/project/napari-bigfish) @@ -9439,7 +10041,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 4 - Beta', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/MontpellierRessourcesImagerie/napari-bigfish/issues', 'Documentation, https://montpellierressourcesimagerie.github.io/napari-bigfish/', 'Source Code, https://github.com/MontpellierRessourcesImagerie/napari-bigfish', 'User Support, https://github.com/MontpellierRessourcesImagerie/napari-bigfish/issues']",,,napari-bigfish.make_qwidget,napari-bigfish.make_sample_data,,,,https://pypi.org/project/napari-bigfish,https://github.com/MontpellierRessourcesImagerie/napari-bigfish, -96,napari-bigwarp,0.0.1,2022-07-06,2023-06-18,napari-bigwarp,Ben Kantor,benkantor@gmail.com,BSD-3-Clause,https://github.com/bkntr/napari-bigwarp,BigWarp-like interface for napari,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'opencv-contrib-python', 'opencv-python']","# napari-bigwarp +103,napari-bigwarp,0.0.1,2022-07-06,2023-06-18,napari-bigwarp,Ben Kantor,benkantor@gmail.com,BSD-3-Clause,https://github.com/bkntr/napari-bigwarp,BigWarp-like interface for napari,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'opencv-contrib-python', 'opencv-python']","# napari-bigwarp [![License](https://img.shields.io/pypi/l/napari-bigwarp.svg?color=green)](https://github.com/bkntr/napari-bigwarp/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-bigwarp.svg?color=green)](https://pypi.org/project/napari-bigwarp) @@ -9509,7 +10111,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['Bug Tracker, https://github.com/bkntr/napari-bigwarp/issues', 'Documentation, https://github.com/bkntr/napari-bigwarp#README.md', 'Source Code, https://github.com/bkntr/napari-bigwarp', 'User Support, https://github.com/bkntr/napari-bigwarp/issues']",,,napari-bigwarp.BigWarpQWidget,,,,,https://pypi.org/project/napari-bigwarp,https://github.com/bkntr/napari-bigwarp, -97,napari-bil-data-viewer,0.6.0,2022-02-10,2023-06-18,napari-bil-data-viewer,Alan M Watson,alan.watson@pitt.edu,BSD-3-Clause,https://github.com/brain-image-library/napari-bil-data-viewer,Napari plugin for viewing Brain Image Library datasets,>=3.8,"['napari[all]', 'napari-plugin-engine >=0.1.4', 'scikit-image', 'fsspec', 'requests', 'aiohttp', 'imagecodecs', 'beautifulsoup4', 'dask', 'neurom ==3.2.2', 'napari-ome-zarr ==0.5.2']","

+104,napari-bil-data-viewer,0.6.0,2022-02-10,2023-06-18,napari-bil-data-viewer,Alan M Watson,alan.watson@pitt.edu,BSD-3-Clause,https://github.com/brain-image-library/napari-bil-data-viewer,Napari plugin for viewing Brain Image Library datasets,>=3.8,"['napari[all]', 'napari-plugin-engine >=0.1.4', 'scikit-image', 'fsspec', 'requests', 'aiohttp', 'imagecodecs', 'beautifulsoup4', 'dask', 'neurom ==3.2.2', 'napari-ome-zarr ==0.5.2']","

@@ -9654,7 +10256,7 @@ Add metadata link to curated datasets Add widget to visualize histology RGB tiffs ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/brain-image-library/napari-bil-data-viewer/issues', 'Documentation, https://github.com/brain-image-library/napari-bil-data-viewer#README.md', 'Source Code, https://github.com/brain-image-library/napari-bil-data-viewer', 'User Support, https://github.com/brain-image-library/napari-bil-data-viewer']",napari-bil-data-viewer.napari_get_reader,,napari-bil-data-viewer.LoadCuratedDatasets,,['*'],,,https://pypi.org/project/napari-bil-data-viewer,https://github.com/brain-image-library/napari-bil-data-viewer, -98,napari bio sample data,0.0.4,2022-08-18,2023-06-18,napari-bio-sample-data,Chi-Li Chiu,cchiu@chanzuckerberg.com,BSD-3-Clause,https://github.com/chili-chiu/napari-bio-sample-data,a sample data plugin for bio-related demos,>=3.8,"['numpy', 'fsspec', 'zarr (>=2.12.0)', 'dask', 's3fs', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-bio-sample-data +105,napari bio sample data,0.0.4,2022-08-18,2023-06-18,napari-bio-sample-data,Chi-Li Chiu,cchiu@chanzuckerberg.com,BSD-3-Clause,https://github.com/chili-chiu/napari-bio-sample-data,a sample data plugin for bio-related demos,>=3.8,"['numpy', 'fsspec', 'zarr (>=2.12.0)', 'dask', 's3fs', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-bio-sample-data [![License](https://img.shields.io/pypi/l/napari-bio-sample-data.svg?color=green)](https://github.com/chili-chiu/napari-bio-sample-data/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-bio-sample-data.svg?color=green)](https://pypi.org/project/napari-bio-sample-data) @@ -9745,7 +10347,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/chili-chiu/napari-bio-sample-data/issues', 'Documentation, https://github.com/chili-chiu/napari-bio-sample-data#README.md', 'Source Code, https://github.com/chili-chiu/napari-bio-sample-data', 'User Support, https://github.com/chili-chiu/napari-bio-sample-data/issues']",,,,napari-bio-sample-data.tomo_data,,,,https://pypi.org/project/napari-bio-sample-data,https://github.com/chili-chiu/napari-bio-sample-data, -99,napari-bioformats,0.2.1,2021-07-09,2023-06-16,napari-bioformats,Talley Lambert,talley.lambert@gmail.com,GPL-3.0,https://github.com/tlambert03/napari-bioformats,"Bioformats for napari, using pims",>=3.7,"['jpype1', 'napari-plugin-engine (>=0.1.4)', 'numpy', 'ome-types', 'pims', 'requests', ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-bioformats +106,napari-bioformats,0.2.1,2021-07-09,2023-06-16,napari-bioformats,Talley Lambert,talley.lambert@gmail.com,GPL-3.0,https://github.com/tlambert03/napari-bioformats,"Bioformats for napari, using pims",>=3.7,"['jpype1', 'napari-plugin-engine (>=0.1.4)', 'numpy', 'ome-types', 'pims', 'requests', ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-bioformats [![License](https://img.shields.io/pypi/l/napari-bioformats.svg?color=green)](https://github.com/napari/napari-bioformats/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-bioformats.svg?color=green)](https://pypi.org/project/napari-bioformats) @@ -9830,7 +10432,7 @@ _This [napari] plugin was generated with [Cookiecutter] using with [@napari]'s [ ","['Development Status :: 4 - Beta', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Topic :: Software Development :: Testing']","['Bug Tracker, https://github.com/tlambert03/napari-bioformats/issues', 'Documentation, https://github.com/tlambert03/napari-bioformats#README.md', 'Source Code, https://github.com/tlambert03/napari-bioformats', 'User Support, https://github.com/tlambert03/napari-bioformats/issues']",napari-bioformats.napari_get_reader,,,,['*'],,,https://pypi.org/project/napari-bioformats,https://github.com/tlambert03/napari-bioformats, -100,BioImage.IO Model Manager,0.1.3,2022-07-11,2023-06-18,napari-bioimageio,,,,https://github.com/bioimage-io/napari-bioimageio,,>=3.7,"['napari', 'bioimageio.core (>=0.5.1)', 'PyYAML (>=6.0)']","# napari-bioimageio +107,BioImage.IO Model Manager,0.1.3,2022-07-11,2023-06-18,napari-bioimageio,,,,https://github.com/bioimage-io/napari-bioimageio,,>=3.7,"['napari', 'bioimageio.core (>=0.5.1)', 'PyYAML (>=6.0)']","# napari-bioimageio napari plugin for managing AI models in the [BioImage Model Zoo](https://bioimage.io). @@ -9941,7 +10543,7 @@ It will also install this package in development mode, so that code changes are - Continuous integration is by default supported via [GitHub actions](https://help.github.com/en/actions). GitHub actions is free for public repositories and comes with 2000 free Ubuntu build minutes per month for private repositories. ","['Framework :: napari', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.7']",,,,napari-bioimageio.QtBioImageIOModelManager,,,,,https://pypi.org/project/napari-bioimageio,https://github.com/bioimage-io/napari-bioimageio, -101,BIOMAG Annotator,0.0.3,,,napari-biomag-annotator,"Reka Hollandi, David Bauer",hunreka93@hotmail.com,BSD-3-Clause,,An annotator tool collection by the BIOMAG group.,>=3.8,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-annotatorj', 'napari-nD-annotator', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-biomag-annotator +108,BIOMAG Annotator,0.0.3,,,napari-biomag-annotator,"Reka Hollandi, David Bauer",hunreka93@hotmail.com,BSD-3-Clause,,An annotator tool collection by the BIOMAG group.,>=3.8,"['napari', 'napari-plugin-engine >=0.1.4', 'napari-annotatorj', 'napari-nD-annotator', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-biomag-annotator [![License BSD-3](https://img.shields.io/pypi/l/napari-biomag-annotator.svg?color=green)](https://github.com/biomag-lab/napari-biomag-annotator/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-biomag-annotator.svg?color=green)](https://pypi.org/project/napari-biomag-annotator) @@ -10052,7 +10654,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/biomag-lab/napari-biomag-annotator/issues', 'Documentation, https://github.com/biomag-lab/napari-biomag-annotator#README.md', 'Source Code, https://github.com/biomag-lab/napari-biomag-annotator', 'User Support, https://github.com/biomag-lab/napari-biomag-annotator/issues']",napari-biomag-annotator.get_reader,napari-biomag-annotator.write_multiple,napari-biomag-annotator.BIOMAGAnnotator,,['*.npy'],,['.npy'],https://pypi.org/project/napari-biomag-annotator,, -102,Bleaching Correction,0.0.1,2023-03-30,2023-06-18,napari-bleach-correct,Alexander Marx,a.marx95@gmx.de,MIT,https://github.com/marx-alex/napari-bleach-correct,A napari plugin to correct time-lapse images for photobleaching.,>=3.8,"['numpy', 'magicgui', 'qtpy', 'scikit-image', 'scipy', 'pyqtgraph', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-bleach-correct +109,Bleaching Correction,0.0.1,2023-03-30,2023-06-18,napari-bleach-correct,Alexander Marx,a.marx95@gmx.de,MIT,https://github.com/marx-alex/napari-bleach-correct,A napari plugin to correct time-lapse images for photobleaching.,>=3.8,"['numpy', 'magicgui', 'qtpy', 'scikit-image', 'scipy', 'pyqtgraph', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-bleach-correct [![License](https://img.shields.io/github/license/marx-alex/napari-bleach-correct)](https://github.com/marx-alex/napari-bleach-correct) [![PyPI](https://img.shields.io/pypi/v/napari-bleach-correct.svg?color=green)](https://pypi.org/project/napari-bleach-correct) @@ -10167,7 +10769,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['Bug Tracker, https://github.com/marx-alex/napari-bleach-correct/issues', 'Documentation, https://github.com/marx-alex/napari-bleach-correct#README.md', 'Source Code, https://github.com/marx-alex/napari-bleach-correct', 'User Support, https://github.com/marx-alex/napari-bleach-correct/issues']",,,napari-bleach-correct.main_widget,napari-bleach-correct.make_sample_data,,,,https://pypi.org/project/napari-bleach-correct,https://github.com/marx-alex/napari-bleach-correct, -103,Blender Visualization,1.0.1,,,napari-blender,Krijn H. van der Steen,"""Krijn H. van der Steen"" "," +110,Blender Visualization,1.0.1,,,napari-blender,Krijn H. van der Steen,"""Krijn H. van der Steen"" "," Mozilla Public License Version 2.0",,A plug-in to help visualize and analyze organoid segmentation using Blender,>=3.10,"['numpy', 'magicgui', 'qtpy', 'scikit-image', 'napari-video', 'tifffile', 'bpy >=4.0.0', 'trimesh', 'opencv-python', 'scipy', 'pathlib', 'mathutils', 'pandas']","# napari-blender napari-blender is a plugin for napari that allows you to render 3D scenes using Blender. @@ -10238,7 +10840,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 3 - Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Mozilla Public License 2.0 (MPL 2.0)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/Living-Technologies/napari-blender/issues', 'Documentation, https://living-technologies.github.io/napari-blender/index.html', 'Source Code, https://github.com/Living-Technologies/napari-blender', 'User Support, https://github.com/Living-Technologies/napari-blender/issues']",napari-blender.get_reader,napari-blender.write_multiple,napari-blender.make_transparant_widget,napari-blender.make_sample_data,['*.npy'],,['.npy'],https://pypi.org/project/napari-blender,, -104,napari-blender-bridge,0.2.0,2023-04-17,2023-06-18,napari-blender-bridge,Robert Haase,robert.haase@tu-dresden.de,GNU GPL v3.0,https://github.com/haesleinhuepf/napari-blender-bridge,Transfer surface layers between Napari and Blender,>=3.8,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari-tools-menu', 'napari-process-points-and-surfaces (>=0.4.2)', 'vedo']","# napari-blender-bridge +111,napari-blender-bridge,0.2.0,2023-04-17,2023-06-18,napari-blender-bridge,Robert Haase,robert.haase@tu-dresden.de,GNU GPL v3.0,https://github.com/haesleinhuepf/napari-blender-bridge,Transfer surface layers between Napari and Blender,>=3.8,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari-tools-menu', 'napari-process-points-and-surfaces (>=0.4.2)', 'vedo']","# napari-blender-bridge @@ -10381,7 +10983,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']",,,,,,,,,https://pypi.org/project/napari-blender-bridge,https://github.com/haesleinhuepf/napari-blender-bridge, -105,napari blob detection,0.0.2,2022-06-13,2023-06-18,napari-blob-detection,"Andy Sweet, Chi-Li Chiu","andrewdsweet@gmail.com, cchiu@chanzuckerberg.com",BSD-3-Clause,https://github.com/andy-sweet/napari-blob-detection,Detects blobs in images,>=3.8,"['napari (>=0.4.13)', 'numpy', 'scikit-image', 'magicgui', ""pytest ; extra == 'test'""]","# napari-blob-detection +112,napari blob detection,0.0.2,2022-06-13,2023-06-18,napari-blob-detection,"Andy Sweet, Chi-Li Chiu","andrewdsweet@gmail.com, cchiu@chanzuckerberg.com",BSD-3-Clause,https://github.com/andy-sweet/napari-blob-detection,Detects blobs in images,>=3.8,"['napari (>=0.4.13)', 'numpy', 'scikit-image', 'magicgui', ""pytest ; extra == 'test'""]","# napari-blob-detection [![License](https://img.shields.io/pypi/l/napari-blob-detection.svg?color=green)](https://github.com/andy-sweet/napari-blob-detection/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-blob-detection.svg?color=green)](https://pypi.org/project/napari-blob-detection) @@ -10484,7 +11086,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/andy-sweet/napari-blob-detection/issues', 'Documentation, https://github.com/andy-sweet/napari-blob-detection#README.md', 'Source Code, https://github.com/andy-sweet/napari-blob-detection', 'User Support, https://github.com/andy-sweet/napari-blob-detection/issues']",,,napari-blob-detection.detect_blobs_widget,,,,,https://pypi.org/project/napari-blob-detection,https://github.com/andy-sweet/napari-blob-detection, -106,Blosc2 Reader & Writer,0.0.2,,,napari-blosc2,Karol Gotkowski,karol.gotkowski@dkfz.de," +113,Blosc2 Reader & Writer,0.0.2,,,napari-blosc2,Karol Gotkowski,karol.gotkowski@dkfz.de," Apache License Version 2.0, January 2004 http://www.apache.org/licenses/ @@ -10746,7 +11348,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']",,napari-blosc2.get_reader,napari-blosc2.write_multiple,,,['*.b2nd'],,['.b2nd'],https://pypi.org/project/napari-blosc2,, -107,Blossom,0.1.6,2022-07-07,2023-11-07,napari-blossom,Herearii Metuarea,herearii.metuarea@gmail.com,BSD-3-Clause,https://github.com/hereariim/napari-blossom,Segmentation of blossom apple tree images,>=3.8,"['numpy >=1.23.0', 'magicgui >=0.6.1', 'qtpy', 'opencv-python-headless >=4.7.0.68', 'tensorflow >=2.11.0', 'scikit-image >=0.19.3', 'napari', 'focal-loss >=0.0.7', 'pillow >=9.3.0', 'tqdm >=4.64.1', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-blossom +114,Blossom,0.1.6,2022-07-07,2023-11-07,napari-blossom,Herearii Metuarea,herearii.metuarea@gmail.com,BSD-3-Clause,https://github.com/hereariim/napari-blossom,Segmentation of blossom apple tree images,>=3.8,"['numpy >=1.23.0', 'magicgui >=0.6.1', 'qtpy', 'opencv-python-headless >=4.7.0.68', 'tensorflow >=2.11.0', 'scikit-image >=0.19.3', 'napari', 'focal-loss >=0.0.7', 'pillow >=9.3.0', 'tqdm >=4.64.1', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-blossom [![License BSD-3](https://img.shields.io/pypi/l/napari-blossom.svg?color=green)](https://github.com/hereariim/napari-blossom/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-blossom.svg?color=green)](https://pypi.org/project/napari-blossom) @@ -10821,7 +11423,75 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['Bug Tracker, https://github.com/hereariim/napari-blossom/issues', 'Documentation, https://github.com/hereariim/napari-blossom#README.md', 'Source Code, https://github.com/hereariim/napari-blossom', 'User Support, https://github.com/hereariim/napari-blossom/issues']",napari-blossom.get_reader,napari-blossom.write_multiple,napari-blossom.model_segmentation,napari-blossom.make_sample_data,['*.npy'],,['.npy'],https://pypi.org/project/napari-blossom,https://github.com/hereariim/napari-blossom, -108,FooBar Segmentation,0.0.2,2023-10-27,2023-10-27,napari-boardgame-maker,Johannes Soltwedel,johannes_richard.soltwedel@tu-dresden.de,BSD-3-Clause,https://pypi.org/project/napari-boardgame-maker,Make boardgame tiles,>=3.8,"['numpy', 'magicgui', 'qtpy', 'napari-stl-exporter', 'vedo', 'napari-tools-menu', 'imagecodecs', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-boardgame-maker +115,Bluesky,0.0.2,,,napari-bluesky,Kyle Harrington,bluesky@kyleharrington.com,MIT,,A plugin for posting to Bluesky from napari,>=3.9,"['numpy', 'magicgui', 'qtpy', 'scikit-image', 'atproto', 'appdirs', 'python-dotenv', 'pillow', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# napari-bluesky + +[![License MIT](https://img.shields.io/pypi/l/napari-bluesky.svg?color=green)](https://github.com/kephale/napari-bluesky/raw/main/LICENSE) +[![PyPI](https://img.shields.io/pypi/v/napari-bluesky.svg?color=green)](https://pypi.org/project/napari-bluesky) +[![Python Version](https://img.shields.io/pypi/pyversions/napari-bluesky.svg?color=green)](https://python.org) +[![tests](https://github.com/kephale/napari-bluesky/workflows/tests/badge.svg)](https://github.com/kephale/napari-bluesky/actions) +[![codecov](https://codecov.io/gh/kephale/napari-bluesky/branch/main/graph/badge.svg)](https://codecov.io/gh/kephale/napari-bluesky) +[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-bluesky)](https://napari-hub.org/plugins/napari-bluesky) + +A plugin for posting to Bluesky from napari + +---------------------------------- + +This [napari] plugin was generated with [copier] using the [napari-plugin-template]. + + + +## Installation + +You can install `napari-bluesky` via [pip]: + + pip install napari-bluesky + + + +To install latest development version : + + pip install git+https://github.com/kephale/napari-bluesky.git + + +## Contributing + +Contributions are very welcome. Tests can be run with [tox], please ensure +the coverage at least stays the same before you submit a pull request. + +## License + +Distributed under the terms of the [MIT] license, +""napari-bluesky"" is free and open source software + +## Issues + +If you encounter any problems, please [file an issue] along with a detailed description. + +[napari]: https://github.com/napari/napari +[copier]: https://copier.readthedocs.io/en/stable/ +[@napari]: https://github.com/napari +[MIT]: http://opensource.org/licenses/MIT +[BSD-3]: http://opensource.org/licenses/BSD-3-Clause +[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt +[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt +[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0 +[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt +[napari-plugin-template]: https://github.com/napari/napari-plugin-template + +[file an issue]: https://github.com/kephale/napari-bluesky/issues + +[napari]: https://github.com/napari/napari +[tox]: https://tox.readthedocs.io/en/latest/ +[pip]: https://pypi.org/project/pip/ +[PyPI]: https://pypi.org/ +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/kephale/napari-bluesky/issues', 'Documentation, https://github.com/kephale/napari-bluesky#README.md', 'Source Code, https://github.com/kephale/napari-bluesky', 'User Support, https://github.com/kephale/napari-bluesky/issues']",,,napari-bluesky.make_qwidget,,,,,https://pypi.org/project/napari-bluesky,, +116,FooBar Segmentation,0.0.2,2023-10-27,2023-10-27,napari-boardgame-maker,Johannes Soltwedel,johannes_richard.soltwedel@tu-dresden.de,BSD-3-Clause,https://pypi.org/project/napari-boardgame-maker,Make boardgame tiles,>=3.8,"['numpy', 'magicgui', 'qtpy', 'napari-stl-exporter', 'vedo', 'napari-tools-menu', 'imagecodecs', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-boardgame-maker [![License BSD-3](https://img.shields.io/pypi/l/napari-boardgame-maker.svg?color=green)](https://github.com/jo-mueller/napari-boardgame-maker/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-boardgame-maker.svg?color=green)](https://pypi.org/project/napari-boardgame-maker) @@ -10932,7 +11602,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']",,,napari-boardgame-maker.write_single_image,napari-boardgame-maker.boardgame_maker,napari-boardgame-maker.rhone_glacier,,['.npy'],,https://pypi.org/project/napari-boardgame-maker,, -109,Boids,0.0.1,2023-04-11,2023-06-18,napari-boids,Léo Guignard,leo.guignard@univ-amu.fr,BSD-3-Clause,https://github.com/leoguignard/napari-boids,A plugin to look at boids,>=3.8,"['numpy', 'scipy', 'magicgui', 'qtpy', 'napari', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# napari-boids +117,Boids,0.0.1,2023-04-11,2023-06-18,napari-boids,Léo Guignard,leo.guignard@univ-amu.fr,BSD-3-Clause,https://github.com/leoguignard/napari-boids,A plugin to look at boids,>=3.8,"['numpy', 'scipy', 'magicgui', 'qtpy', 'napari', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# napari-boids [![License BSD-3](https://img.shields.io/pypi/l/napari-boids.svg?color=green)](https://github.com/leoguignard/napari-boids/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-boids.svg?color=green)](https://pypi.org/project/napari-boids) @@ -11000,7 +11670,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/leoguignard/napari-boids/issues', 'Documentation, https://github.com/leoguignard/napari-boids#README.md', 'Source Code, https://github.com/leoguignard/napari-boids', 'User Support, https://github.com/leoguignard/napari-boids/issues']",,,napari-boids.boid_viewer,,,,,https://pypi.org/project/napari-boids,https://github.com/leoguignard/napari-boids, -110,Box Manager,0.4.12,2023-04-11,2023-12-09,napari-boxmanager,Markus Stabrin,markus.stabrin@mpi-dortmund.mpg.de,MPL-2.0,https://github.com/MPI-Dortmund/napari-boxmanager,Particle selection tool for cryo-em,>=3.10,"['matplotlib', 'mrcfile', 'numpy <=1.23.5', 'pystardb >=0.4.2', 'napari >=0.4.17', 'pandas', 'scipy', 'tifffile', 'tqdm', ""mrcfile ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]","# napari-boxmanager +118,Box Manager,0.4.14,2023-04-11,2023-12-09,napari-boxmanager,Markus Stabrin,markus.stabrin@mpi-dortmund.mpg.de,MPL-2.0,https://github.com/MPI-Dortmund/napari-boxmanager,Particle selection tool for cryo-em,>=3.10,"['matplotlib', 'mrcfile', 'numpy<=1.23.5', 'pystardb>=0.4.2', 'napari>=0.4.17', 'pandas', 'scipy', 'tifffile', 'tqdm', 'mrcfile; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'tox; extra == ""testing""']","# napari-boxmanager [![License Mozilla Public License 2.0](https://img.shields.io/pypi/l/napari-boxmanager.svg?color=green)](https://github.com/mstabrin/napari-boxmanager/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-boxmanager.svg?color=green)](https://pypi.org/project/napari-boxmanager) @@ -11060,7 +11730,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Mozilla Public License 2.0 (MPL 2.0)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']",,napari-boxmanager.get_reader,napari-boxmanager.get_writer,napari-boxmanager.select_metric,,"['*.tloc', '*.temb', '*.tmap', '*.cbox', '*.box', '*.star', '*.mrc', '*.mrcs', '*.st', '*.coords', '*.rec', '*.cs', '*.tif', '*.tiff', '*.mrci']","['.tloc', '.temb', '.tmap', '.cbox', '.box', '.star', '.mrc', '.mrcs', '.st', '.coords', '.rec', '.mrci']",,https://pypi.org/project/napari-boxmanager,https://github.com/MPI-Dortmund/napari-boxmanager, -111,Napari Brainbow Diagnose,0.1.3,2023-04-18,2023-06-18,napari-brainbow-diagnose,Clement Caporal,clement.caporal@polytechnique.edu,BSD-3-Clause,https://github.com/LaboratoryOpticsBiosciences/napari-brainbow-diagnose,Visualize and Diagnose brainbow dataset in color space.,>=3.8,"['numpy', 'magicgui', 'qtpy', 'pooch', 'matplotlib', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""pre-commit ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-brainbow-diagnose +119,Napari Brainbow Diagnose,0.1.3,2023-04-18,2023-06-18,napari-brainbow-diagnose,Clement Caporal,clement.caporal@polytechnique.edu,BSD-3-Clause,https://github.com/LaboratoryOpticsBiosciences/napari-brainbow-diagnose,Visualize and Diagnose brainbow dataset in color space.,>=3.8,"['numpy', 'magicgui', 'qtpy', 'pooch', 'matplotlib', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""pre-commit ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-brainbow-diagnose [![License BSD-3](https://img.shields.io/pypi/l/napari-brainbow-diagnose.svg?color=green)](https://github.com/LaboratoryOpticsBiosciences/napari-brainbow-diagnose/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-brainbow-diagnose.svg?color=green)](https://pypi.org/project/napari-brainbow-diagnose) @@ -11166,7 +11836,7 @@ and review the napari docs for plugin developers: https://napari.org/stable/plugins/index.html --> ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/LaboratoryOpticsBiosciences/napari-brainbow-diagnose/issues', 'Documentation, https://github.com/LaboratoryOpticsBiosciences/napari-brainbow-diagnose#README.md', 'Source Code, https://github.com/LaboratoryOpticsBiosciences/napari-brainbow-diagnose', 'User Support, https://github.com/LaboratoryOpticsBiosciences/napari-brainbow-diagnose/issues']",,,napari-brainbow-diagnose.DiagnoseWidget,napari-brainbow-diagnose.make_rgb_cube_data,,,,https://pypi.org/project/napari-brainbow-diagnose,https://github.com/LaboratoryOpticsBiosciences/napari-brainbow-diagnose, -112,Brainways,0.1.11.1,,,napari-brainways,Ben Kantor,benkantor@mail.tau.ac.il,GPL-3.0,,Brainways UI,>=3.9,"['brainways[all] ==0.1.11', 'datasets ==2.15.0', 'importlib-resources', 'napari[all] ==0.4.18', 'qtpy ==2.3.1', ""brainways-reg-model ; extra == 'all'"", ""py ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt <4.1.0 ; extra == 'testing'"", ""tox ; extra == 'testing'""]","# Overview +120,Brainways,0.1.11.1,,,napari-brainways,Ben Kantor,benkantor@mail.tau.ac.il,GPL-3.0,,Brainways UI,>=3.9,"['brainways[all] ==0.1.11', 'datasets ==2.15.0', 'importlib-resources', 'napari[all] ==0.4.18', 'qtpy ==2.3.1', ""brainways-reg-model ; extra == 'all'"", ""py ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt <4.1.0 ; extra == 'testing'"", ""tox ; extra == 'testing'""]","# Overview [![DOI](https://img.shields.io/badge/DOI-10.1101/2023.05.25.542252-green.svg)](https://doi.org/10.1101/2023.05.25.542252) [![License GNU GPL v3.0](https://img.shields.io/pypi/l/napari-brainways.svg?color=green)](https://github.com/bkntr/napari-brainways/raw/main/LICENSE) @@ -11269,7 +11939,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/bkntr/napari-brainways/issues', 'Documentation, https://github.com/bkntr/napari-brainways#README.md', 'Source Code, https://github.com/bkntr/napari-brainways', 'User Support, https://github.com/bkntr/napari-brainways/issues']",napari-brainways.read_bwp,,napari-brainways.make_qwidget,napari-brainways.load_sample_project,['*.bwp'],,,https://pypi.org/project/napari-brainways,, -113,napari-brightness-contrast,0.1.8,2022-02-04,2023-06-18,napari-brightness-contrast,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,https://github.com/haesleinhuepf/napari-brightness-contrast,Advanced layer visualization options,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'napari', 'numpy', 'pyqtgraph', 'superqt', 'napari-tools-menu', ""pytest ; extra == 'tests'"", ""pytest-qt ; extra == 'tests'""]","# napari-brightness-contrast +121,napari-brightness-contrast,0.1.8,2022-02-04,2023-06-18,napari-brightness-contrast,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,https://github.com/haesleinhuepf/napari-brightness-contrast,Advanced layer visualization options,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'napari', 'numpy', 'pyqtgraph', 'superqt', 'napari-tools-menu', ""pytest ; extra == 'tests'"", ""pytest-qt ; extra == 'tests'""]","# napari-brightness-contrast [![License](https://img.shields.io/pypi/l/napari-brightness-contrast.svg?color=green)](https://github.com/haesleinhuepf/napari-brightness-contrast/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-brightness-contrast.svg?color=green)](https://pypi.org/project/napari-brightness-contrast) @@ -11333,7 +12003,7 @@ If you encounter any problems, please [open a thread on image.sc](https://image. [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/haesleinhuepf/napari-brightness-contrast/issues', 'Documentation, https://github.com/haesleinhuepf/napari-brightness-contrast#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-brightness-contrast', 'User Support, https://github.com/haesleinhuepf/napari-brightness-contrast/issues']",,,napari-brightness-contrast.BrightnessContrast,,,,,https://pypi.org/project/napari-brightness-contrast,https://github.com/haesleinhuepf/napari-brightness-contrast, -114,napari-brushsettings,0.0.2,2022-02-10,2023-06-18,napari-brushsettings,Philipp Schoennenbeck,p.schoennenbeck@fz-juelich.de,BSD-3-Clause,https://github.com/Croxa/napari-brushsettings,A simple plugin to set the brush settings for segmentation in napari,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy']","# napari-brushsettings +122,napari-brushsettings,0.0.2,2022-02-10,2023-06-18,napari-brushsettings,Philipp Schoennenbeck,p.schoennenbeck@fz-juelich.de,BSD-3-Clause,https://github.com/Croxa/napari-brushsettings,A simple plugin to set the brush settings for segmentation in napari,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy']","# napari-brushsettings [![License](https://img.shields.io/pypi/l/napari-brushsettings.svg?color=green)](https://github.com/Croxa/napari-brushsettings/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-brushsettings.svg?color=green)](https://pypi.org/project/napari-brushsettings) @@ -11395,7 +12065,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/Croxa/napari-brushsettings/issues', 'Documentation, https://github.com/Croxa/napari-brushsettings#README.md', 'Source Code, https://github.com/Croxa/napari-brushsettings', 'User Support, https://github.com/Croxa/napari-brushsettings/issues']",,,napari-brushsettings.Brushsize,,,,,https://pypi.org/project/napari-brushsettings,https://github.com/Croxa/napari-brushsettings, -115,Bud Cell Segmenter,0.1.4,2023-11-18,2023-11-18,napari-bud-cell-segmenter,Aurelien Maillot,aurelien.maillot@protonmail.com,BSD-3-Clause,https://pypi.org/project/napari-bud-cell-segmenter,A plugin to segment embryonic mammary bud cells and detect 2 RNA probes,>=3.8,"['numpy', 'magicgui', 'qtpy', 'pandas', 'scikit-image', 'napari', 'tifffile', 'matplotlib', 'scipy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-bud-cell-segmenter +123,Bud Cell Segmenter,0.1.4,2023-11-18,2023-11-18,napari-bud-cell-segmenter,Aurelien Maillot,aurelien.maillot@protonmail.com,BSD-3-Clause,https://pypi.org/project/napari-bud-cell-segmenter,A plugin to segment embryonic mammary bud cells and detect 2 RNA probes,>=3.8,"['numpy', 'magicgui', 'qtpy', 'pandas', 'scikit-image', 'napari', 'tifffile', 'matplotlib', 'scipy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-bud-cell-segmenter [![License BSD-3](https://img.shields.io/pypi/l/napari-bud-cell-segmenter.svg?color=green)](https://github.com/AurelienMaillot/napari-bud-cell-segmenter/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-bud-cell-segmenter.svg?color=green)](https://pypi.org/project/napari-bud-cell-segmenter) @@ -11463,7 +12133,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/AurelienMaillot/napari-bud-cell-segmenter/issues', 'Documentation, https://github.com/AurelienMaillot/napari-bud-cell-segmenter#README.md', 'Source Code, https://github.com/AurelienMaillot/napari-bud-cell-segmenter', 'User Support, https://github.com/AurelienMaillot/napari-bud-cell-segmenter/issues']",napari-bud-cell-segmenter.get_reader,napari-bud-cell-segmenter.write_multiple,napari-bud-cell-segmenter.load_data,napari-bud-cell-segmenter.make_sample_data,['*.npy'],,['.npy'],https://pypi.org/project/napari-bud-cell-segmenter,, -116,napari BudAnnotation,0.1.6,2023-04-11,2023-06-18,napari-buds,Sander van Otterdijk,scvanotterdijk@gmail.com,BSD-3-Clause,https://github.com/SanderSMFISH/napari-buds,Random-forest automated bud annotation,>=3.8,"['numpy', 'magicgui', 'qtpy', 'pandas', 'napari', 'magic-class', 'scipy', 'scikit-learn', 'scikit-image', 'matplotlib', 'joblib', 'imageio-ffmpeg', 'stackview', 'jupyterlab', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-buds +124,napari BudAnnotation,0.1.6,2023-04-11,2023-06-18,napari-buds,Sander van Otterdijk,scvanotterdijk@gmail.com,BSD-3-Clause,https://github.com/SanderSMFISH/napari-buds,Random-forest automated bud annotation,>=3.8,"['numpy', 'magicgui', 'qtpy', 'pandas', 'napari', 'magic-class', 'scipy', 'scikit-learn', 'scikit-image', 'matplotlib', 'joblib', 'imageio-ffmpeg', 'stackview', 'jupyterlab', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-buds [![License BSD-3](https://img.shields.io/pypi/l/napari-buds.svg?color=green)](https://github.com/SanderSMFISH/napari-buds/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-buds.svg?color=green)](https://pypi.org/project/napari-buds) @@ -11594,7 +12264,7 @@ In these cases, it might help to adjust in your display setting the display scal ## References 1. Arganda-Carreras, I., Kaynig, V., Rueden, C., Eliceiri, K. W., Schindelin, J., Cardona, A., & Sebastian Seung, H. (2017). Trainable Weka Segmentation: a machine learning tool for microscopy pixel classification. Bioinformatics, 33(15), 2424–2426. doi:10.1093/bioinformatics/btx180 ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/SanderSMFISH/napari-buds/issues', 'Documentation, https://github.com/SanderSMFISH/napari-buds#README.md', 'Source Code, https://github.com/SanderSMFISH/napari-buds', 'User Support, https://github.com/SanderSMFISH/napari-buds/issues']",napari-buds.get_reader,napari-buds.write_multiple,napari-buds.translate,napari-buds.make_sample_data,['*.npy'],,['.npy'],https://pypi.org/project/napari-buds,https://github.com/SanderSMFISH/napari-buds, -117,napari Calibration,0.0.14,,,napari-calibration,Tristan Cotte,tristan.cotte@sgs.com,BSD-3-Clause,,Plug in which enables to make camera calibration,>=3.7,"['napari', 'numpy', 'qt-material', 'opencv-python']","# napari-calibration +125,napari Calibration,0.0.14,,,napari-calibration,Tristan Cotte,tristan.cotte@sgs.com,BSD-3-Clause,,Plug in which enables to make camera calibration,>=3.7,"['napari', 'numpy', 'qt-material', 'opencv-python']","# napari-calibration [![License](https://img.shields.io/pypi/l/napari-calibration.svg?color=green)](https://github.com/tcotte/napari-calibration/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-calibration.svg?color=green)](https://pypi.org/project/napari-calibration) @@ -11662,7 +12332,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/tcotte/napari-calibration/issues', 'Documentation, https://github.com/tcotte/napari-calibration#README.md', 'Source Code, https://github.com/tcotte/napari-calibration', 'User Support, https://github.com/tcotte/napari-calibration/issues']",,,napari-calibration.ImageForm,,,,,https://pypi.org/project/napari-calibration,, -118,CAphid,0.0.1,2023-10-29,2023-10-29,napari-caphid,Herearii Metuarea,herearii.metuarea@gmail.com,BSD-3-Clause,https://pypi.org/project/napari-caphid,Annotation of aphid and update table,>=3.8,"['numpy', 'magicgui', 'qtpy', 'opencv-python', 'tqdm', 'pandas', 'Pillow', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-caphid +126,CAphid,0.0.1,2023-10-29,2023-10-29,napari-caphid,Herearii Metuarea,herearii.metuarea@gmail.com,BSD-3-Clause,https://pypi.org/project/napari-caphid,Annotation of aphid and update table,>=3.8,"['numpy', 'magicgui', 'qtpy', 'opencv-python', 'tqdm', 'pandas', 'Pillow', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-caphid [![License BSD-3](https://img.shields.io/pypi/l/napari-caphid.svg?color=green)](https://github.com/hereariim/napari-caphid/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-caphid.svg?color=green)](https://pypi.org/project/napari-caphid) @@ -11792,7 +12462,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/hereariim/napari-caphid/issues', 'Documentation, https://github.com/hereariim/napari-caphid#README.md', 'Source Code, https://github.com/hereariim/napari-caphid', 'User Support, https://github.com/hereariim/napari-caphid/issues']",napari-caphid.get_reader,napari-caphid.write_multiple,napari-caphid.make_process_func,,['*.npy'],,['.npy'],https://pypi.org/project/napari-caphid,, -119,Cardio Biosensor Evaluation,0.1.5,,,napari-cardio-bio-eval,Nanobiosensorics,horvath.robert@energia.mta.hu," +127,Cardio Biosensor Evaluation,0.1.5,,,napari-cardio-bio-eval,Nanobiosensorics,horvath.robert@energia.mta.hu," Copyright (c) 2024, Nanobiosensorics All rights reserved. @@ -11968,7 +12638,7 @@ If you encounter any problems, please file an issue along with a detailed descri [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']",,,,napari-cardio-bio-eval.cardio_bio_peak_detection_widget,,,,,https://pypi.org/project/napari-cardio-bio-eval,, -120,napari-ccp4map,1.0,2022-01-31,2023-06-18,napari-ccp4map,Simon Biberger,dev@biberger.xyz,BSD-3-Clause,https://github.com/biberger/napari-ccp4map,Enables napari to read .map files in the ccp4 format. Drag&Drop or press Ctrl+O to read files.,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'gemmi']","# napari-ccp4map +128,napari-ccp4map,1.0,2022-01-31,2023-06-18,napari-ccp4map,Simon Biberger,dev@biberger.xyz,BSD-3-Clause,https://github.com/biberger/napari-ccp4map,Enables napari to read .map files in the ccp4 format. Drag&Drop or press Ctrl+O to read files.,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'gemmi']","# napari-ccp4map [![License](https://img.shields.io/pypi/l/napari-ccp4map.svg?color=green)](https://github.com/biberger/napari-ccp4map/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-ccp4map.svg?color=green)](https://pypi.org/project/napari-ccp4map) @@ -12037,7 +12707,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/biberger/napari-ccp4map/issues', 'Documentation, https://github.com/biberger/napari-ccp4map#README.md', 'Source Code, https://github.com/biberger/napari-ccp4map', 'User Support, https://github.com/biberger/napari-ccp4map/issues']",napari-ccp4map.napari_get_reader,,,,['*'],,,https://pypi.org/project/napari-ccp4map,https://github.com/biberger/napari-ccp4map, -121,3D cell centroid annotator,0.0.1,2023-04-12,2023-06-18,napari-cell-centroid-annotator,Tim Van De Looverbosch,tim.vandelooverbosch@gmail.com,MIT,https://github.com/tim-vdl/napari-cell-centroid-annotator,A simple plugin to annotate cell centroids in 3D images,>=3.8,"['numpy', 'pandas', 'tifffile', 'pathlib', 'napari', 'napari-plugin-engine', 'napari-layer-table', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-cell-centroid-annotator +129,3D cell centroid annotator,0.0.1,2023-04-12,2023-06-18,napari-cell-centroid-annotator,Tim Van De Looverbosch,tim.vandelooverbosch@gmail.com,MIT,https://github.com/tim-vdl/napari-cell-centroid-annotator,A simple plugin to annotate cell centroids in 3D images,>=3.8,"['numpy', 'pandas', 'tifffile', 'pathlib', 'napari', 'napari-plugin-engine', 'napari-layer-table', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-cell-centroid-annotator [![License MIT](https://img.shields.io/pypi/l/napari-cell-centroid-annotator.svg?color=green)](https://github.com/tim-vdl/napari-cell-centroid-annotator/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-cell-centroid-annotator.svg?color=green)](https://pypi.org/project/napari-cell-centroid-annotator) @@ -12105,7 +12775,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/tim-vdl/napari-cell-centroid-annotator/issues', 'Documentation, https://github.com/tim-vdl/napari-cell-centroid-annotator#README.md', 'Source Code, https://github.com/tim-vdl/napari-cell-centroid-annotator', 'User Support, https://github.com/tim-vdl/napari-cell-centroid-annotator/issues']",napari-cell-centroid-annotator.get_reader,,napari-cell-centroid-annotator.make_annotate_centroids_widget,,"['*.tif', '*.tiff', '*.csv', '*.npy']",,,https://pypi.org/project/napari-cell-centroid-annotator,https://github.com/tim-vdl/napari-cell-centroid-annotator, -122,napari-chatgpt | Omega,2024.8.31,,,napari-chatgpt,Loic A. Royer and contributors,royerloic@gmail.com,BSD-3-Clause,,A napari plugin to process and analyse images with chatGPT.,>=3.9,"['numpy', 'magicgui', 'scikit-image', 'qtpy', 'QtAwesome', 'langchain==0.2.15', 'langchain-community==0.2.14', 'langchain-openai==0.1.23', 'langchain-anthropic==0.1.23', 'openai==1.42.0', 'anthropic==0.34.1', 'fastapi', 'uvicorn', 'websockets', 'tiktoken', 'wikipedia', 'lxml', 'gTTS', 'playsound', 'matplotlib', 'xarray', 'arbol', 'playwright', 'duckduckgo-search==6.2.11', 'ome-zarr', 'transformers', 'cryptography', 'tabulate', 'numba', 'imageio[ffmpeg,pyav]', 'notebook', 'nbformat', 'jedi', 'black', 'lxml-html-clean', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","## Home of _Omega_, a napari-aware autonomous LLM-based agent specialized in image processing and analysis. +130,napari-chatgpt | Omega,2024.10.18.1,,,napari-chatgpt,Loic A. Royer and contributors,royerloic@gmail.com,BSD-3-Clause,,A napari plugin to process and analyse images with chatGPT.,>=3.9,"['numpy', 'magicgui', 'scikit-image', 'qtpy', 'QtAwesome', 'langchain==0.2.15', 'langchain-community==0.2.14', 'langchain-openai==0.1.23', 'langchain-anthropic==0.1.23', 'openai==1.42.0', 'anthropic==0.34.1', 'fastapi', 'uvicorn', 'websockets', 'tiktoken', 'wikipedia', 'lxml', 'gTTS', 'playsound', 'matplotlib', 'xarray', 'arbol', 'playwright', 'duckduckgo-search==6.3.2', 'ome-zarr', 'transformers', 'cryptography', 'tabulate', 'numba', 'imageio[ffmpeg,pyav]', 'notebook', 'nbformat', 'jedi', 'black', 'lxml-html-clean', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","## Home of _Omega_, a napari-aware autonomous LLM-based agent specialized in image processing and analysis. [![License BSD-3](https://img.shields.io/pypi/l/napari-chatgpt.svg?color=green)](https://github.com/royerlab/napari-chatgpt/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-chatgpt.svg?color=green)](https://pypi.org/project/napari-chatgpt) @@ -12320,7 +12990,7 @@ description. [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/royerlab/napari-chatgpt/issues', 'Documentation, https://github.com/royerlab/napari-chatgpt#README.md', 'Source Code, https://github.com/royerlab/napari-chatgpt', 'User Support, https://github.com/royerlab/napari-chatgpt/issues']",,,napari-chatgpt.start_omega,,,,,https://pypi.org/project/napari-chatgpt,, -123,napari-checkerboard,0.0.3,,,napari-checkerboard,Viktor van der Valk,v.o.van_der_valk@lumc.nl,Apache Software License 2.0,,Compare two images with the itk checkerboard filter,>=3.6,"['napari-plugin-engine (>=0.1.4)', 'numpy (>=1.19.0)', 'napari (>=0.4.6)', 'magicgui (>=0.2.6)', 'itk-elastix (>=0.11.1)', 'itk-napari-conversion (>=0.3.1)', 'napari-itk-io (>=0.1.0)']","# napari-checkerboard +131,napari-checkerboard,0.0.3,,,napari-checkerboard,Viktor van der Valk,v.o.van_der_valk@lumc.nl,Apache Software License 2.0,,Compare two images with the itk checkerboard filter,>=3.6,"['napari-plugin-engine (>=0.1.4)', 'numpy (>=1.19.0)', 'napari (>=0.4.6)', 'magicgui (>=0.2.6)', 'itk-elastix (>=0.11.1)', 'itk-napari-conversion (>=0.3.1)', 'napari-itk-io (>=0.1.0)']","# napari-checkerboard [![License](https://img.shields.io/pypi/l/napari-checkerboard.svg?color=green)](https://github.com/ViktorvdValk/napari-checkerboard/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-checkerboard.svg?color=green)](https://pypi.org/project/napari-checkerboard) @@ -12384,7 +13054,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: Apache Software License']",,,,napari-checkerboard.checkerboard,,,,,https://pypi.org/project/napari-checkerboard,, -124,napari-clemreg,0.2.0,,,napari-clemreg,Daniel Krentzel,dkrentzel@pm.me,MIT,,A plugin for registering multimodal image volumes based on common segmented structures of interest with point-clouds.,>=3.7,"['typing-extensions', 'setuptools', 'packaging', 'numpy ==1.22.0', 'magicgui ==0.7.3', 'scipy ==1.10.1', 'napari', 'scikit-image ==0.21.0', 'h5py ==3.9.0', 'matplotlib ==3.7.3', 'imageio ==2.31.5', 'tifffile ==2023.7.10', 'probreg ==0.3.6', 'open3d ==0.17.0', 'transforms3d ==0.4.1', 'tqdm ==4.66.1', 'empanada-dl ==0.1.7', 'torch ==2.0.1', 'connected-components-3d ==3.12.3']","# napari-clemrerg +132,napari-clemreg,0.2.0,,,napari-clemreg,Daniel Krentzel,dkrentzel@pm.me,MIT,,A plugin for registering multimodal image volumes based on common segmented structures of interest with point-clouds.,>=3.7,"['typing_extensions', 'setuptools', 'packaging', 'numpy==1.22.0', 'magicgui==0.7.3', 'scipy==1.10.1', 'napari', 'scikit-image==0.21.0', 'h5py==3.9.0', 'matplotlib==3.7.3', 'imageio==2.31.5', 'tifffile==2023.7.10', 'probreg==0.3.6', 'open3d==0.17.0', 'transforms3d==0.4.1', 'tqdm==4.66.1', 'empanada-dl==0.1.7', 'torch==2.0.1', 'magicgui==0.7.3', 'connected-components-3d==3.12.3']","# napari-clemrerg ### An automated point cloud based registration algorithm for correlative light and volume electron microscopy [![License](https://img.shields.io/pypi/l/napari-clemreg.svg?color=green)](https://github.com/krentzd/napari-clemreg/raw/master/LICENSE) @@ -12531,7 +13201,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template. ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['Bug Tracker, https://github.com/krentzd/napari-clemreg/issues', 'Documentation, https://github.com/krentzd/napari-clemreg#README.md', 'Source Code, https://github.com/krentzd/napari-clemreg', 'User Support, https://github.com/krentzd/napari-clemreg/issues']",napari-clemreg.get_reader,,napari-clemreg.make_run_registration,napari-clemreg.sample_data,"['*.tif', '*.tiff']",,,https://pypi.org/project/napari-clemreg,, -125,napari clipboard,0.0.1,2023-10-29,2023-10-29,napari-clipboard,Kyle Harrington,czi@kyleharrington.com,BSD-3-Clause,https://pypi.org/project/napari-clipboard,A plugin for creating napari layers from the System clipboard,>=3.8,"['numpy', 'magicgui', 'qtpy', 'napari', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-clipboard +133,napari clipboard,0.0.1,2023-10-29,2023-10-29,napari-clipboard,Kyle Harrington,czi@kyleharrington.com,BSD-3-Clause,https://pypi.org/project/napari-clipboard,A plugin for creating napari layers from the System clipboard,>=3.8,"['numpy', 'magicgui', 'qtpy', 'napari', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-clipboard [![License BSD-3](https://img.shields.io/pypi/l/napari-clipboard.svg?color=green)](https://github.com/kephale/napari-clipboard/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-clipboard.svg?color=green)](https://pypi.org/project/napari-clipboard) @@ -12599,7 +13269,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/kephale/napari-clipboard/issues', 'Documentation, https://github.com/kephale/napari-clipboard#README.md', 'Source Code, https://github.com/kephale/napari-clipboard', 'User Support, https://github.com/kephale/napari-clipboard/issues']",,,napari-clipboard.image_from_clipboard,,,,,https://pypi.org/project/napari-clipboard,, -126,napari-clusters-plotter,0.8.1,2022-02-17,2024-08-15,napari-clusters-plotter,"Laura Zigutyte, Ryan Savill, Johannes Müller, Marcelo Zoccoler, Thorsten Wagner, Robert Haase","zigutyte@gmail.com, robert.haase@tu-dresden.de",BSD-3-Clause,https://github.com/BiAPoL/napari-clusters-plotter,A plugin to use with napari for clustering objects according to their properties,>=3.7,"['napari-plugin-engine >=0.1.4', 'numpy <=1.23.5,>=1.21', 'scikit-learn', 'matplotlib', 'pandas', 'umap-learn', 'napari-tools-menu', 'napari-skimage-regionprops >=0.3.1', 'hdbscan', 'qtpy', 'dask', 'napari >=0.4.19', 'magicgui', 'scikit-image', 'superqt', 'scipy']","# napari-clusters-plotter +134,napari-clusters-plotter,0.8.1,2022-02-17,2024-08-15,napari-clusters-plotter,"Laura Zigutyte, Ryan Savill, Johannes Müller, Marcelo Zoccoler, Thorsten Wagner, Robert Haase","zigutyte@gmail.com, robert.haase@tu-dresden.de",BSD-3-Clause,https://github.com/BiAPoL/napari-clusters-plotter,A plugin to use with napari for clustering objects according to their properties,>=3.7,"['napari-plugin-engine >=0.1.4', 'numpy <=1.23.5,>=1.21', 'scikit-learn', 'matplotlib', 'pandas', 'umap-learn', 'napari-tools-menu', 'napari-skimage-regionprops >=0.3.1', 'hdbscan', 'qtpy', 'dask', 'napari >=0.4.19', 'magicgui', 'scikit-image', 'superqt', 'scipy']","# napari-clusters-plotter [![License](https://img.shields.io/pypi/l/napari-clusters-plotter.svg?color=green)](https://github.com/lazigu/napari-clusters-plotter/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-clusters-plotter.svg?color=green)](https://pypi.org/project/napari-clusters-plotter) @@ -12907,7 +13577,7 @@ with a detailed description. [PyPI]: https://pypi.org/ [conda]: https://docs.conda.io/projects/conda/en/latest/ ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/BiAPoL/napari-clusters-plotter/issues', 'Documentation, https://github.com/BiAPoL/napari-clusters-plotter', 'Source Code, https://github.com/BiAPoL/napari-clusters-plotter', 'User Support, https://github.com/BiAPoL/napari-clusters-plotter/issues']",,,napari-clusters-plotter.PlotterWidget,,,,,https://pypi.org/project/napari-clusters-plotter,https://github.com/BiAPoL/napari-clusters-plotter, -127,napari-compressed-labels-io,0.0.2,2022-01-31,2023-06-18,napari-compressed-labels-io,Draga Doncila,ddoncila@gmail.com,MIT,https://github.com/DragaDoncila/napari-compressed-labels-io,Plugin exploring different options for reading and writing compressed and portable labels layers in napari.,>=3.6,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'zarr', 'dask[complete]']","# napari-compressed-labels-io +135,napari-compressed-labels-io,0.0.2,2022-01-31,2023-06-18,napari-compressed-labels-io,Draga Doncila,ddoncila@gmail.com,MIT,https://github.com/DragaDoncila/napari-compressed-labels-io,Plugin exploring different options for reading and writing compressed and portable labels layers in napari.,>=3.6,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'zarr', 'dask[complete]']","# napari-compressed-labels-io [![License](https://img.shields.io/pypi/l/napari-compressed-labels-io.svg?color=green)](https://github.com/DragaDoncila/napari-compressed-labels-io/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-compressed-labels-io.svg?color=green)](https://pypi.org/project/napari-compressed-labels-io) @@ -13037,7 +13707,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']",,napari-compressed-labels-io.get_zarr_labels,napari-compressed-labels-io.labels_to_zarr,,,['*'],,,https://pypi.org/project/napari-compressed-labels-io,https://github.com/DragaDoncila/napari-compressed-labels-io, -128,Napari Conference,0.1.0,,,napari-conference,Kyle Harrington,czi@kyleharrington.com,BSD-3-Clause,,A simple plugin that allows you to use napari + your webcam in video calls,>=3.8,"['numpy', 'magicgui', 'qtpy', 'opencv-python', 'pyvirtualcam', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-conference +136,Napari Conference,0.1.0,,,napari-conference,Kyle Harrington,czi@kyleharrington.com,BSD-3-Clause,,A simple plugin that allows you to use napari + your webcam in video calls,>=3.8,"['numpy', 'magicgui', 'qtpy', 'opencv-python', 'pyvirtualcam', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-conference [![License BSD-3](https://img.shields.io/pypi/l/napari-conference.svg?color=green)](https://github.com/kephale/napari-conference/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-conference.svg?color=green)](https://pypi.org/project/napari-conference) @@ -13136,7 +13806,7 @@ and review the napari docs for plugin developers: https://napari.org/stable/plugins/index.html --> ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/kephale/napari-conference/issues', 'Documentation, https://github.com/kephale/napari-conference#README.md', 'Source Code, https://github.com/kephale/napari-conference', 'User Support, https://github.com/kephale/napari-conference/issues']",,,napari-conference.make_widget,,,,,https://pypi.org/project/napari-conference,, -129,Conidie,1.0.2,2023-04-11,2023-06-18,napari-conidie,Herearii Metuarea,herearii.metuarea@gmail.com,BSD-3-Clause,https://github.com/hereariim/napari-conidie,A segmentation tool to get conidie and hyphe,>=3.8,"['numpy', 'magicgui', 'qtpy', 'pandas', 'h5py', 'scikit-image', 'napari', 'matplotlib', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-conidie +137,Conidie,1.0.2,2023-04-11,2023-06-18,napari-conidie,Herearii Metuarea,herearii.metuarea@gmail.com,BSD-3-Clause,https://github.com/hereariim/napari-conidie,A segmentation tool to get conidie and hyphe,>=3.8,"['numpy', 'magicgui', 'qtpy', 'pandas', 'h5py', 'scikit-image', 'napari', 'matplotlib', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-conidie [![License BSD-3](https://img.shields.io/pypi/l/napari-conidie.svg?color=green)](https://github.com/hereariim/napari-conidie/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-conidie.svg?color=green)](https://pypi.org/project/napari-conidie) @@ -13236,7 +13906,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/hereariim/napari-conidie/issues', 'Documentation, https://github.com/hereariim/napari-conidie#README.md', 'Source Code, https://github.com/hereariim/napari-conidie', 'User Support, https://github.com/hereariim/napari-conidie/issues']",,,napari-conidie.segmentation,,,,,https://pypi.org/project/napari-conidie,https://github.com/hereariim/napari-conidie, -130,napari-console,0.1.0,2021-02-06,2024-10-02,napari-console,napari team,napari team ,BSD-3-Clause,https://github.com/napari/napari-console,A plugin that adds a console to napari,>=3.9,"['IPython>=7.7.0', 'ipykernel>=5.2.0', 'qtconsole!=4.7.6,!=5.4.2,>=4.5.1', 'qtpy>=1.7.0', 'napari-console[pyqt5]; extra == ""pyqt""', 'PyQt5!=5.15.0,>=5.13.2; extra == ""pyqt5""', 'PyQt6>6.5; extra == ""pyqt6""', 'PyQt6!=6.6.1; platform_system == ""Darwin"" and extra == ""pyqt6""', 'napari-console[pyside2]; extra == ""pyside""', 'PySide2!=5.15.0,>=5.13.2; (python_version < ""3.11"" and platform_machine != ""arm64"") and extra == ""pyside2""', 'PySide6<6.5; python_version < ""3.12"" and extra == ""pyside6_experimental""', 'napari-console[pyqt]; extra == ""qt""', 'napari[pyqt]; extra == ""testing""']","# napari-console (WIP, under active development) +138,napari-console,0.1.1,2021-02-06,2024-12-21,napari-console,napari team,napari team ,BSD-3-Clause,https://github.com/napari/napari-console,A plugin that adds a console to napari,>=3.9,"['IPython>=7.7.0', 'ipykernel>=5.2.0', 'qtconsole!=4.7.6,!=5.4.2,>=4.5.1', 'qtpy>=1.7.0', 'napari-console[pyqt5]; extra == ""pyqt""', 'PyQt5!=5.15.0,>=5.13.2; extra == ""pyqt5""', 'PyQt6>6.5; extra == ""pyqt6""', 'PyQt6!=6.6.1; platform_system == ""Darwin"" and extra == ""pyqt6""', 'napari-console[pyside2]; extra == ""pyside""', 'PySide2!=5.15.0,>=5.13.2; (python_version < ""3.11"" and platform_machine != ""arm64"") and extra == ""pyside2""', 'PySide6<6.5; python_version < ""3.12"" and extra == ""pyside6_experimental""', 'napari-console[pyqt]; extra == ""qt""', 'napari[pyqt]; extra == ""testing""']","# napari-console (WIP, under active development) [![License](https://img.shields.io/pypi/l/napari-console.svg?color=green)](https://github.com/napari/napari-console/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-console.svg?color=green)](https://pypi.org/project/napari-console) @@ -13329,7 +13999,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 4 - Beta', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Software Development :: Testing']","['Homepage, https://github.com/napari/napari-console', 'Bug Tracker, https://github.com/napari/napari-console/issues', 'Source Code, https://github.com/napari/napari-console']",,,,,,,,https://pypi.org/project/napari-console,https://github.com/napari/napari-console, -131,napari ConvPaint,0.5.1,2023-12-04,2024-09-20,napari-convpaint,Guillaume Witz,guillaume.witz@unibe.ch,BSD-3-Clause,https://github.com/guiwitz/napari-convpaint,A plugin for segmentation by pixel classification using convolutional feature extraction,>=3.9,"['einops', 'joblib', 'magicgui', 'napari', 'napari-annotation-project', 'napari-guitils', 'numpy', 'pyyaml', 'qtpy', 'scikit-learn', 'scikit-image', 'tifffile', 'torch', 'torchvision>=0.13.0', 'pandas', 'zarr', 'cellpose; extra == ""cellpose""', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']"," +139,napari ConvPaint,0.5.2,2023-12-04,2024-10-16,napari-convpaint,Guillaume Witz,guillaume.witz@unibe.ch,BSD-3-Clause,https://github.com/guiwitz/napari-convpaint,A plugin for segmentation by pixel classification using convolutional feature extraction,>=3.9,"['einops', 'joblib', 'magicgui', 'napari', 'napari-annotation-project', 'napari-guitils', 'numpy', 'pyyaml', 'qtpy', 'scikit-learn', 'scikit-image', 'tifffile', 'torch', 'torchvision>=0.13.0', 'pandas', 'zarr', 'cellpose; extra == ""cellpose""', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']"," [![License](https://img.shields.io/pypi/l/napari-convpaint.svg?color=green)](https://github.com/guiwitz/napari-convpaint/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-convpaint.svg?color=green)](https://pypi.org/project/napari-convpaint) [![Python Version](https://img.shields.io/pypi/pyversions/napari-convpaint.svg?color=green)](https://python.org) @@ -13417,7 +14087,7 @@ If you find Convpaint useful in your research, please consider citing: } ``` ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/guiwitz/napari-convpaint/issues', 'Documentation, https://github.com/guiwitz/napari-convpaint#README.md', 'Source Code, https://github.com/guiwitz/napari-convpaint', 'User Support, https://github.com/guiwitz/napari-convpaint/issues']",,,napari-convpaint.make_qwidget,napari-convpaint.labelcell3d,,,,https://pypi.org/project/napari-convpaint,https://github.com/guiwitz/napari-convpaint, -132,Cookiecut,0.1.1,,,napari-cookiecut,Sean Martin,martins7@tcd.ie,BSD-3-Clause,,Fixed cut,>=3.8,"['numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-cookiecut +140,Cookiecut,0.1.1,,,napari-cookiecut,Sean Martin,martins7@tcd.ie,BSD-3-Clause,,Fixed cut,>=3.8,"['numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-cookiecut [![License BSD-3](https://img.shields.io/pypi/l/napari-cookiecut.svg?color=green)](https://github.com/seankmartin/napari-cookiecut/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-cookiecut.svg?color=green)](https://pypi.org/project/napari-cookiecut) @@ -13485,7 +14155,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/seankmartin/napari-cookiecut/issues', 'Documentation, https://github.com/seankmartin/napari-cookiecut#README.md', 'Source Code, https://github.com/seankmartin/napari-cookiecut', 'User Support, https://github.com/seankmartin/napari-cookiecut/issues']",napari-cookiecut.get_reader,napari-cookiecut.write_multiple,napari-cookiecut.make_qwidget,napari-cookiecut.make_sample_data,['*.npy'],,['.npy'],https://pypi.org/project/napari-cookiecut,, -133,Napari Correct Drift,0.4.0,2023-08-01,2023-11-06,napari-correct-drift,Christoph Sommer,christoph.sommer@ist.ac.at,BSD-3-Clause,https://github.com/sommerc/napari-correct-drift,Drift correction 2D/3D for Napari similar to Fijis Correct 3D drift macro,>=3.8,"['napari', 'numpy', 'qtpy', 'pandas', 'scikit-image', 'scipy', 'dask', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-correct-drift +141,Napari Correct Drift,0.4.0,2023-08-01,2023-11-06,napari-correct-drift,Christoph Sommer,christoph.sommer@ist.ac.at,BSD-3-Clause,https://github.com/sommerc/napari-correct-drift,Drift correction 2D/3D for Napari similar to Fijis Correct 3D drift macro,>=3.8,"['napari', 'numpy', 'qtpy', 'pandas', 'scikit-image', 'scipy', 'dask', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-correct-drift [![License BSD-3](https://img.shields.io/pypi/l/napari-correct-drift.svg?color=green)](https://github.com/sommerc/napari-correct-drift/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-correct-drift.svg?color=green)](https://pypi.org/project/napari-correct-drift) @@ -13544,7 +14214,7 @@ Distributed under the terms of the [BSD-3] license, ### Acknowledgment This project has been made possible in part by grant number NP2-0000000051 from the napari Plugin Foundations Grants (Cycle 2). ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/sommerc/napari-correct-drift/issues', 'Documentation, https://github.com/sommerc/napari-correct-drift#README.md', 'Source Code, https://github.com/sommerc/napari-correct-drift', 'User Support, https://github.com/sommerc/napari-correct-drift/issues']",,,napari-correct-drift.make_qwidget,napari-correct-drift.sample_2d,,,,https://pypi.org/project/napari-correct-drift,https://github.com/sommerc/napari-correct-drift, -134,napari-cosmos-ts,0.3.2,,,napari-cosmos-ts,Marcel Goldschen-Ohm,Marcel Goldschen-Ohm ,,,napari plugin for colocalization single-molecule spectroscopy (CoSMoS) time series (TS) analysis,>=3.10,"['qtpy>=2.4.1', 'pyqtgraph>=0.13.4', 'pystackreg>=0.2.7', 'pycpd>=2.0.0', 'qtawesome>=1.3.1', 'h5py>=3.11.0']","# napari-cosmos-ts +142,napari-cosmos-ts,0.3.6,,,napari-cosmos-ts,Marcel Goldschen-Ohm,Marcel Goldschen-Ohm ,,,napari plugin for colocalization single-molecule spectroscopy (CoSMoS) time series (TS) analysis,>=3.10,"['numpy<2.1,>=2.0', 'qtpy>=2.4.1', 'pyqtgraph>=0.13.4', 'pystackreg>=0.2.7', 'pycpd>=2.0.0', 'qtawesome>=1.3.1', 'h5py>=3.11.0']","# napari-cosmos-ts [napari](https://napari.org/stable/) plugin for colocalization single-molecule spectroscopy (CoSMoS) time series (TS) analysis. ![GitHub Tag](https://img.shields.io/github/v/tag/marcel-goldschen-ohm/napari-cosmos-ts?cacheSeconds=1) @@ -13607,8 +14277,8 @@ Or for the latest version of `napari-cosmos-ts`: pip install napari-cosmos-ts@git+https://github.com/marcel-goldschen-ohm/napari-cosmos-ts ``` *!!! Remember, every time you open a new command shell or terminal you will need to activate the virtual environment where you installed napari-cosmos-ts before [running the app](#run).* -","['Development Status :: 4 - Beta', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: MIT License', 'Framework :: napari', 'Programming Language :: Python :: 3 :: Only']","['Homepage, https://github.com/marcel-goldschen-ohm/napari-cosmos-ts', 'Repository, https://github.com/marcel-goldschen-ohm/napari-cosmos-ts']",,,napari-cosmos-ts.main_widget,,,,,https://pypi.org/project/napari-cosmos-ts,, -135,CryoET Data Portal,0.4.1,,,napari-cryoet-data-portal,Andy Sweet,andrewdsweet@gmail.com,MIT,,"List, preview, and open data from the CZII CryoET Data Portal",>=3.8,"['cmap', 'cryoet-data-portal~=3.0', 'fsspec[http,s3]', 'npe2', 'numpy', 'napari>=0.4.19', 'napari-ome-zarr', 'ndjson', 'qtpy', 'superqt', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-mock; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# napari-cryoet-data-portal +","['Development Status :: 4 - Beta', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: MIT License', 'Framework :: napari', 'Programming Language :: Python :: 3 :: Only']","['homepage, https://github.com/marcel-goldschen-ohm/napari-cosmos-ts', 'repository, https://github.com/marcel-goldschen-ohm/napari-cosmos-ts']",,,napari-cosmos-ts.main_widget,,,,,https://pypi.org/project/napari-cosmos-ts,, +143,CryoET Data Portal,0.5.0,,,napari-cryoet-data-portal,Andy Sweet,andrewdsweet@gmail.com,MIT,,"List, preview, and open data from the CZII CryoET Data Portal",>=3.8,"['cmap', 'cryoet_data_portal~=4.0', 'fsspec[http,s3]', 'npe2', 'numpy', 'napari>=0.4.19', 'napari_ome_zarr', 'ndjson', 'qtpy', 'superqt', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-mock; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# napari-cryoet-data-portal [![MIT License](https://img.shields.io/pypi/l/napari-cryoet-data-portal.svg?color=green)](https://github.com/chanzuckerberg/napari-cryoet-data-portal/raw/main/LICENSE) [![Python package index](https://img.shields.io/pypi/v/napari-cryoet-data-portal.svg?color=green)](https://pypi.org/project/napari-cryoet-data-portal) @@ -13721,7 +14391,7 @@ This plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-na [open a pull request]: https://github.com/chanzuckerberg/napari-cryoet-data-portal/pulls [latest napari installation instructions]: https://napari.org/stable/tutorials/fundamentals/installation.html#install-as-python-package-recommended ","['Development Status :: 4 - Beta', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/chanzuckerberg/napari-cryoet-data-portal/issues', 'Documentation, https://github.com/chanzuckerberg/napari-cryoet-data-portal#README.md', 'Source Code, https://github.com/chanzuckerberg/napari-cryoet-data-portal', 'User Support, https://github.com/chanzuckerberg/napari-cryoet-data-portal/issues']",napari-cryoet-data-portal.tomogram_ome_zarr_reader,,napari-cryoet-data-portal.DataPortalWidget,napari-cryoet-data-portal.tomogram_10000_ts_026,['*.zarr'],,,https://pypi.org/project/napari-cryoet-data-portal,, -136,Cryo-FIB/SEM Image Post-Processing,0.0.1,,,napari-cryofibsem-imgpro,Shaina Vivienne To,shaina.to@radboudumc.nl,"Apache License +144,Cryo-FIB/SEM Image Post-Processing,0.0.1,,,napari-cryofibsem-imgpro,Shaina Vivienne To,shaina.to@radboudumc.nl,"Apache License Version 2.0, January 2004 http://www.apache.org/licenses/ @@ -13999,7 +14669,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template. ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/shainatorumc/napari-cryofibsem-imgpro/issues', 'Documentation, https://github.com/shainatorumc/napari-cryofibsem-imgpro#README.md', 'Source Code, https://github.com/shainatorumc/napari-cryofibsem-imgpro', 'User Support, https://github.com/shainatorumc/napari-cryofibsem-imgpro/issues']",napari-cryofibsem-imgpro.get_reader,napari-cryofibsem-imgpro.write_multiple,napari-cryofibsem-imgpro.make_decurtain_widget,napari-cryofibsem-imgpro.make_sample_data,['*.npy'],,['.npy'],https://pypi.org/project/napari-cryofibsem-imgpro,, -137,Cryo-FIB/SEM Image Stacks Post-Processing,0.0.1,,,napari-cryofibsem-imgproc,Shaina V. To,shaina.to@radboudumc.nl," +145,Cryo-FIB/SEM Image Stacks Post-Processing,0.0.3,,,napari-cryofibsem-imgproc,Shaina V. To,shaina.to@radboudumc.nl," Apache License Version 2.0, January 2004 http://www.apache.org/licenses/ @@ -14228,7 +14898,7 @@ https://napari.org/stable/plugins/index.html It is recommended to create a fresh [conda] environment with Python 3.12 and napari: - conda create -n imgpro_env -c conda-forge python=3.12.0 napari pyqt + conda create -n imgproc-env -c conda-forge python=3.12.0 napari pyqt You can install `napari-cryofibsem-imgproc` via [pip]: @@ -14275,7 +14945,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/EMCRUMC/napari-cryofibsem-imgproc/issues', 'Documentation, https://github.com/EMCRUMC/napari-cryofibsem-imgproc#README.md', 'Source Code, https://github.com/EMCRUMC/napari-cryofibsem-imgproc', 'User Support, https://github.com/EMCRUMC/napari-cryofibsem-imgproc/issues']",,,napari-cryofibsem-imgproc.make_decurtain_widget,napari-cryofibsem-imgproc.make_sample_data,,,,https://pypi.org/project/napari-cryofibsem-imgproc,, -138,napari-cryofibsem-monitor,0.0.3,2022-01-29,2023-06-18,napari-cryofibsem-monitor,Johannes Elferich,jojotux123@hotmail.com,MIT,https://github.com/jojoelfe/napari-cryofibsem-monitor,A plugin to monitor the creation of lamella using AutoTEM on a TFS Acquilos instrument,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'tifffile', 'imreg-dft', 'matplotlib']","# napari-cryofibsem-monitor +146,napari-cryofibsem-monitor,0.0.3,2022-01-29,2023-06-18,napari-cryofibsem-monitor,Johannes Elferich,jojotux123@hotmail.com,MIT,https://github.com/jojoelfe/napari-cryofibsem-monitor,A plugin to monitor the creation of lamella using AutoTEM on a TFS Acquilos instrument,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'tifffile', 'imreg-dft', 'matplotlib']","# napari-cryofibsem-monitor [![License](https://img.shields.io/pypi/l/napari-cryofibsem-monitor.svg?color=green)](https://github.com/jojoelfe/napari-cryofibsem-monitor/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-cryofibsem-monitor.svg?color=green)](https://pypi.org/project/napari-cryofibsem-monitor) @@ -14353,7 +15023,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['Bug Tracker, https://github.com/jojoelfe/napari-cryofibsem-monitor/issues', 'Documentation, https://github.com/jojoelfe/napari-cryofibsem-monitor#README.md', 'Source Code, https://github.com/jojoelfe/napari-cryofibsem-monitor', 'User Support, https://github.com/jojoelfe/napari-cryofibsem-monitor/issues']",,,napari-cryofibsem-monitor.ExampleQWidget,,,,,https://pypi.org/project/napari-cryofibsem-monitor,https://github.com/jojoelfe/napari-cryofibsem-monitor, -139,Open/write CTC data format,0.2.0,,,napari-ctc-io,Benjamin Gallusser,benjamin.gallusser@epfl.ch,BSD-3-Clause,,Drag and drop annotations/results in the Cell Tracking Challenge (CTC) format into napari.,>=3.9,"['napari', 'numpy', 'scikit-image', 'tifffile', 'pandas', 'imagecodecs', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-ctc-io +147,Read CTC format,0.2.1,,,napari-ctc-io,Benjamin Gallusser,benjamin.gallusser@epfl.ch,BSD-3-Clause,,Drag and drop/write tracks from/to the Cell Tracking Challenge (CTC) format.,>=3.9,"['napari', 'numpy', 'scikit-image', 'tifffile', 'pandas', 'imagecodecs', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""']","# napari-ctc-io [![PyPI](https://img.shields.io/pypi/v/napari-ctc-io.svg?color=green)](https://pypi.org/project/napari-ctc-io) [![tests](https://github.com/bentaculum/napari-ctc-io/workflows/tests/badge.svg)](https://github.com/bentaculum/napari-ctc-io/actions) @@ -14438,7 +15108,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 3 - Alpha', 'Framework :: napari', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/bentaculum/napari-ctc-io/issues', 'Documentation, https://github.com/bentaculum/napari-ctc-io#README.md', 'Source Code, https://github.com/bentaculum/napari-ctc-io', 'User Support, https://github.com/bentaculum/napari-ctc-io/issues']",napari-ctc-io.read_ctc,napari-ctc-io.write_multiple,,,"['TRA', '*RES']",,,https://pypi.org/project/napari-ctc-io,, -140,napari-cupy-image-processing,0.4.1,2022-02-11,2023-08-17,napari-cupy-image-processing,Robert Haase,robert.haase@tu-dresden.de,MIT,https://github.com/haesleinhuepf/napari-cupy-image-processing,GPU-accelerated image processing using CUDA,>=3.7,"['napari-plugin-engine >=0.1.4', 'numpy', 'toolz', 'cupy', 'napari-tools-menu', 'scikit-image', 'napari-time-slicer >=0.4.8', 'napari-skimage-regionprops', 'napari-assistant', 'stackview >=0.3.2']","# napari-cupy-image-processing +148,napari-cupy-image-processing,0.4.1,2022-02-11,2023-08-17,napari-cupy-image-processing,Robert Haase,robert.haase@tu-dresden.de,MIT,https://github.com/haesleinhuepf/napari-cupy-image-processing,GPU-accelerated image processing using CUDA,>=3.7,"['napari-plugin-engine >=0.1.4', 'numpy', 'toolz', 'cupy', 'napari-tools-menu', 'scikit-image', 'napari-time-slicer >=0.4.8', 'napari-skimage-regionprops', 'napari-assistant', 'stackview >=0.3.2']","# napari-cupy-image-processing [![License](https://img.shields.io/pypi/l/napari-cupy-image-processing.svg?color=green)](https://github.com/haesleinhuepf/napari-cupy-image-processing/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-cupy-image-processing.svg?color=green)](https://pypi.org/project/napari-cupy-image-processing) @@ -14521,7 +15191,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 3 - Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['Bug Tracker, https://github.com/haesleinhuepf/napari-cupy-image-processing/issues', 'Documentation, https://github.com/haesleinhuepf/napari-cupy-image-processing#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-cupy-image-processing', 'User Support, https://github.com/haesleinhuepf/napari-cupy-image-processing/issues']",,,napari-cupy-image-processing.napari_experimental_provide_function,,,,,https://pypi.org/project/napari-cupy-image-processing,https://github.com/haesleinhuepf/napari-cupy-image-processing, -141,Cursor tracker,0.1.3,2023-10-29,2023-10-29,napari-cursor-tracker,Florian Aymanns,florian.aymanns@epfl.ch,BSD-3-Clause,https://pypi.org/project/napari-cursor-tracker,Plugin for easy manual annotation/tracking of 3D or 2D + t dataset by following the cursor.,>=3.8,"['numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-cursor-tracker +149,Cursor tracker,0.1.3,2023-10-29,2023-10-29,napari-cursor-tracker,Florian Aymanns,florian.aymanns@epfl.ch,BSD-3-Clause,https://pypi.org/project/napari-cursor-tracker,Plugin for easy manual annotation/tracking of 3D or 2D + t dataset by following the cursor.,>=3.8,"['numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-cursor-tracker [![License BSD-3](https://img.shields.io/pypi/l/napari-cursor-tracker.svg?color=green)](https://github.com/faymanns/napari-cursor-tracker/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-cursor-tracker.svg?color=green)](https://pypi.org/project/napari-cursor-tracker) @@ -14621,7 +15291,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']",,,,napari-cursor-tracker.make_qwidget,napari-cursor-tracker.make_sample_data,,,,https://pypi.org/project/napari-cursor-tracker,, -142,napari-curtain,0.1.1,2022-02-04,2023-06-18,napari-curtain,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,https://github.com/haesleinhuepf/napari-curtain,View one image over another as curtain,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari-tools-menu']","# napari-curtain +150,napari-curtain,0.1.1,2022-02-04,2023-06-18,napari-curtain,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,https://github.com/haesleinhuepf/napari-curtain,View one image over another as curtain,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari-tools-menu']","# napari-curtain [![License](https://img.shields.io/pypi/l/napari-curtain.svg?color=green)](https://github.com/haesleinhuepf/napari-curtain/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-curtain.svg?color=green)](https://pypi.org/project/napari-curtain) @@ -14683,7 +15353,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/haesleinhuepf/napari-curtain/issues', 'Documentation, https://github.com/haesleinhuepf/napari-curtain#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-curtain', 'User Support, https://github.com/haesleinhuepf/napari-curtain/issues']",,,napari-curtain.curtain,,,,,https://pypi.org/project/napari-curtain,https://github.com/haesleinhuepf/napari-curtain, -143,Curviewer,0.1.0,,,napari-curviewer,Romain Fernandez,romain.fernandez@cirad.fr,LGPL-3.0-only,,A plugin to unroll organs along their curved central line,>=3.8,"['numpy', 'magicgui', 'qtpy', 'scikit-image', 'vedo', 'vtk', 'scipy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-curviewer +151,Curviewer,0.1.0,,,napari-curviewer,Romain Fernandez,romain.fernandez@cirad.fr,LGPL-3.0-only,,A plugin to unroll organs along their curved central line,>=3.8,"['numpy', 'magicgui', 'qtpy', 'scikit-image', 'vedo', 'vtk', 'scipy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-curviewer [![License GNU LGPL v3.0](https://img.shields.io/pypi/l/napari-curviewer.svg?color=green)](https://github.com/Rocsg/napari-curviewer/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-curviewer.svg?color=green)](https://pypi.org/project/napari-curviewer) @@ -14751,7 +15421,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU Lesser General Public License v3 (LGPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/Rocsg/napari-curviewer/issues', 'Documentation, https://github.com/Rocsg/napari-curviewer#README.md', 'Source Code, https://github.com/Rocsg/napari-curviewer', 'User Support, https://github.com/Rocsg/napari-curviewer/issues']",napari-curviewer.get_reader,napari-curviewer.write_multiple,napari-curviewer.make_container_widget,napari-curviewer.make_sample_data,['*.npy'],,['.npy'],https://pypi.org/project/napari-curviewer,, -144,CZANN Segmentation,0.0.18,2022-08-18,2023-07-28,napari-czann-segment,Sebastian Rhode,sebrhode@gmail.com,BSD-3-Clause,https://github.com/sebi06/napari-czann-segment,Semantic Segmentation using Deep Learning ONNX models packaged as *.czann files,>=3.9,"['numpy', 'magicgui', 'qtpy', 'napari', 'cztile', 'czmodel[pytorch] >=5', 'onnxruntime-gpu', 'aicsimageio', 'pytest', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-czann-segment +152,CZANN Segmentation,0.0.18,2022-08-18,2023-07-28,napari-czann-segment,Sebastian Rhode,sebrhode@gmail.com,BSD-3-Clause,https://github.com/sebi06/napari-czann-segment,Semantic Segmentation using Deep Learning ONNX models packaged as *.czann files,>=3.9,"['numpy', 'magicgui', 'qtpy', 'napari', 'cztile', 'czmodel[pytorch] >=5', 'onnxruntime-gpu', 'aicsimageio', 'pytest', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-czann-segment [![License](https://img.shields.io/pypi/l/napari-czann-segment.svg?color=green)](https://github.com/sebi06/napari-czann-segment/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-czann-segment.svg?color=green)](https://pypi.org/project/napari-czann-segment) @@ -14899,7 +15569,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [conda]: https://docs.conda.io/projects/conda/en/latest/user-guide/getting-started.html [pytorch]: https://pytorch.org/get-started/locally ","['Development Status :: 3 - Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: BSD License', 'Operating System :: Unix', 'Operating System :: Microsoft :: Windows', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/sebi06/napari-czann-segment/issues', 'Documentation, https://github.com/sebi06/napari-czann-segment#README.md', 'Source Code, https://github.com/sebi06/napari-czann-segment', 'User Support, https://github.com/sebi06/napari-czann-segment/issues']",,,napari-czann-segment.get_czann_widget,,,,,https://pypi.org/project/napari-czann-segment,https://github.com/sebi06/napari-czann-segment, -145,napari-czifile2,0.2.7,2022-01-31,2023-06-18,napari-czifile2,Jonas Windhager,jonas.windhager@uzh.ch,MIT,https://github.com/BodenmillerGroup/napari-czifile2,Carl Zeiss Image (.czi) file support for napari,>=3.8,"['czifile', 'imagecodecs', 'numpy', 'tifffile']","# napari-czifile2 +153,napari-czifile2,0.2.7,2022-01-31,2023-06-18,napari-czifile2,Jonas Windhager,jonas.windhager@uzh.ch,MIT,https://github.com/BodenmillerGroup/napari-czifile2,Carl Zeiss Image (.czi) file support for napari,>=3.8,"['czifile', 'imagecodecs', 'numpy', 'tifffile']","# napari-czifile2 @@ -14947,7 +15617,7 @@ Created and maintained by Jonas Windhager [jonas.windhager@uzh.ch](mailto:jonas. [MIT](https://github.com/BodenmillerGroup/napari-czifile2/blob/main/LICENSE.md) ","['Development Status :: 4 - Beta', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['Bug Tracker, https://github.com/BodenmillerGroup/napari-czifile2/issues', 'Documentation, https://github.com/BodenmillerGroup/napari-czifile2#README.md', 'Source Code, https://github.com/BodenmillerGroup/napari-czifile2', 'User Support, https://github.com/BodenmillerGroup/napari-czifile2/issues']",napari-czifile2.get_reader,,,,['*.czi'],,,https://pypi.org/project/napari-czifile2,https://github.com/BodenmillerGroup/napari-czifile2, -146,napari-data-preview,0.0.3a0,,,napari-data-preview,"Vivien Gaillet, Jules Scholler",jules.scholler@wysscenter.ch,MPL-2.0,,"Preview lightsheet microscopes acquisition, and allow the creation of an XML for importing the data into TeraStitcher.",>=3.7,"['numpy', 'napari[all]', 'lxml', 'napari-tools-menu', 'magic-class', 'napari-plugin-engine (>=0.1.4)', 'dask', 'tifffile', 'dask-image', 'elementpath', 'tk (>=0.1.0)', 'zarr', 'scikit-image', 'PySimpleGUI', 'pytest-shutil']","# napari-data-preview +154,napari-data-preview,0.0.3a0,,,napari-data-preview,"Vivien Gaillet, Jules Scholler",jules.scholler@wysscenter.ch,MPL-2.0,,"Preview lightsheet microscopes acquisition, and allow the creation of an XML for importing the data into TeraStitcher.",>=3.7,"['numpy', 'napari[all]', 'lxml', 'napari-tools-menu', 'magic-class', 'napari-plugin-engine (>=0.1.4)', 'dask', 'tifffile', 'dask-image', 'elementpath', 'tk (>=0.1.0)', 'zarr', 'scikit-image', 'PySimpleGUI', 'pytest-shutil']","# napari-data-preview Preview lightsheet microscopes acquisition, and allow the creation of an XML for importing the data into TeraStitcher. @@ -14963,7 +15633,7 @@ To install latest development version : pip install git+https://github.com/WyssCenter/napari-data-preview.git ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: Mozilla Public License 2.0 (MPL 2.0)']",,napari-data-preview.napari_get_reader,,napari-data-preview.DataPreview,,['*'],,,https://pypi.org/project/napari-data-preview,, -147,Napari DeepFinder,0.0.1,,,napari-deepfinder,Constantin Aronssohn,cnstt@tutanota.com,GPL-3.0-only,,"A napari plugin for the DeepFinder library which includes display, annotation, target generation, segmentation and clustering functionalities. An orthoslice view has been added for an easier visualisation and annotation process.",>=3.8,"['em-deepfinder', 'numpy', 'magicgui', 'qtpy', 'napari', 'scikit-image', 'typing', 'pandas', 'lxml', 'pillow', 'h5py', 'mrcfile', 'scipy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'""]","# napari-deepfinder +155,Napari DeepFinder,0.0.1,,,napari-deepfinder,Constantin Aronssohn,cnstt@tutanota.com,GPL-3.0-only,,"A napari plugin for the DeepFinder library which includes display, annotation, target generation, segmentation and clustering functionalities. An orthoslice view has been added for an easier visualisation and annotation process.",>=3.8,"['em-deepfinder', 'numpy', 'magicgui', 'qtpy', 'napari', 'scikit-image', 'typing', 'pandas', 'lxml', 'pillow', 'h5py', 'mrcfile', 'scipy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'""]","# napari-deepfinder [![License GNU GPL v3.0](https://img.shields.io/pypi/l/napari-deepfinder.svg?color=green)](https://github.com/deep-finder/napari-deepfinder/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-deepfinder.svg?color=green)](https://pypi.org/project/napari-deepfinder) @@ -15034,7 +15704,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 3 - Alpha', 'Intended Audience :: Education', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering', 'Topic :: Scientific/Engineering :: Visualization', 'Topic :: Scientific/Engineering :: Information Analysis', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Topic :: Scientific/Engineering :: Artificial Intelligence', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']","['Bug Tracker, https://github.com/deep-finder/napari-deepfinder/issues', 'Documentation, https://deep-finder.github.io/napari-deepfinder/', 'Source Code, https://github.com/deep-finder/napari-deepfinder', 'User Support, https://github.com/deep-finder/napari-deepfinder/issues']",napari-deepfinder.get_reader,napari-deepfinder.write_annotations,napari-deepfinder.make_reorder_widget,,"['*.mrc', '*.map', '*.rec', '*.h5', '*.tif', '*.TIF', '*.xml', '*.ods', '*.xls', '*.xlsx']",['.xml'],['.mrc'],https://pypi.org/project/napari-deepfinder,, -148,napari DeepLabCut,0.2.1.7,2022-07-05,2024-07-11,napari-deeplabcut,"Team DeepLabCut, Lead by Jessy Lauer",admin@deeplabcut.org,BSD-3-Clause,https://github.com/DeepLabCut/napari-deeplabcut,napari + DeepLabCut annotation tool,>=3.9,"['dask-image', 'matplotlib >=3.3', 'napari ==0.4.18', 'natsort', 'numpy', 'opencv-python-headless', 'pandas', 'pyyaml', 'qtpy >=2.4', 'scikit-image', 'scipy', 'tables', ""pyside6 ==6.4.2 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]","# napari-deeplabcut: keypoint annotation for pose estimation +156,napari DeepLabCut,0.2.1.7,2022-07-05,2024-07-11,napari-deeplabcut,"Team DeepLabCut, Lead by Jessy Lauer",admin@deeplabcut.org,BSD-3-Clause,https://github.com/DeepLabCut/napari-deeplabcut,napari + DeepLabCut annotation tool,>=3.9,"['dask-image', 'matplotlib >=3.3', 'napari ==0.4.18', 'natsort', 'numpy', 'opencv-python-headless', 'pandas', 'pyyaml', 'qtpy >=2.4', 'scikit-image', 'scipy', 'tables', ""pyside6 ==6.4.2 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]","# napari-deeplabcut: keypoint annotation for pose estimation @@ -15260,7 +15930,7 @@ https://napari.org/plugins/stable/index.html [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Artificial Intelligence', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Visualization']","['Bug Tracker, https://github.com/DeepLabCut/napari-deeplabcut/issues', 'Documentation, https://github.com/DeepLabCut/napari-deeplabcut#README.md', 'Source Code, https://github.com/DeepLabCut/napari-deeplabcut', 'User Support, https://github.com/DeepLabCut/napari-deeplabcut/issues']",napari-deeplabcut.get_hdf_reader,napari-deeplabcut.write_hdf,napari-deeplabcut.make_keypoint_controls,,['*.h5'],['.h5'],['.csv'],https://pypi.org/project/napari-deeplabcut,https://github.com/DeepLabCut/napari-deeplabcut, -149,napari DeepMeta,2.1,2022-02-14,2023-06-18,napari-deepmeta,Edgar Lefevre,lefevreedg@gmail.com,MIT,https://github.com/EdgarLefevre/napari-deepmeta,Mice lungs and metastases segmentation tool.,>=3.8,"['connected-components-3d', 'magicgui', 'napari', 'numpy', 'opencv-python', 'qtpy', 'scikit-image', 'torch', ""connected-components-3d ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""opencv-python ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]","# napari-deepmeta +157,napari DeepMeta,2.1,2022-02-14,2023-06-18,napari-deepmeta,Edgar Lefevre,lefevreedg@gmail.com,MIT,https://github.com/EdgarLefevre/napari-deepmeta,Mice lungs and metastases segmentation tool.,>=3.8,"['connected-components-3d', 'magicgui', 'napari', 'numpy', 'opencv-python', 'qtpy', 'scikit-image', 'torch', ""connected-components-3d ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""opencv-python ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]","# napari-deepmeta [![License MIT](https://img.shields.io/pypi/l/napari-deepmeta.svg?color=green)](https://github.com/EdgarLefevre/napari-deepmeta/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-deepmeta.svg?color=green)](https://pypi.org/project/napari-deepmeta) @@ -15333,7 +16003,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['Bug Tracker, https://github.com/EdgarLefevre/napari-deepmeta/issues', 'Documentation, https://github.com/EdgarLefevre/napari-deepmeta#README.md', 'Source Code, https://github.com/EdgarLefevre/napari-deepmeta', 'User Support, https://github.com/EdgarLefevre/napari-deepmeta/issues']",,,napari-deepmeta.make_qwidget,,,,,https://pypi.org/project/napari-deepmeta,https://github.com/EdgarLefevre/napari-deepmeta, -150,napari-DeepSpot,0.0.7,2022-02-23,2023-06-18,napari-DeepSpot,Emmanuel Bouilhol,emmanuel.bouilhol@u-bordeaux.fr,MIT,https://github.com/ebouilhol/napari-DeepSpot,RNA spot enhancement for fluorescent microscopy images,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'pytest', 'pytest-cov', 'pytest-xvfb', 'pytest-qt', 'napari', 'qtpy (==1.9.0)', 'pyqt5', 'tensorflow', 'scikit-image', 'opencv-python']","# napari-DeepSpot +158,napari-DeepSpot,0.0.7,2022-02-23,2023-06-18,napari-DeepSpot,Emmanuel Bouilhol,emmanuel.bouilhol@u-bordeaux.fr,MIT,https://github.com/ebouilhol/napari-DeepSpot,RNA spot enhancement for fluorescent microscopy images,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'pytest', 'pytest-cov', 'pytest-xvfb', 'pytest-qt', 'napari', 'qtpy (==1.9.0)', 'pyqt5', 'tensorflow', 'scikit-image', 'opencv-python']","# napari-DeepSpot [![License](https://img.shields.io/pypi/l/napari-DeepSpot.svg?color=green)](https://github.com/ebouilhol/napari-DeepSpot/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-DeepSpot.svg?color=green)](https://pypi.org/project/napari-DeepSpot) @@ -15455,7 +16125,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['Bug Tracker, https://github.com/ebouilhol/napari-DeepSpot/issues', 'Documentation, https://github.com/ebouilhol/napari-DeepSpot#README.md', 'Source Code, https://github.com/ebouilhol/napari-DeepSpot', 'User Support, https://github.com/ebouilhol/napari-DeepSpot/issues']",,,napari-DeepSpot.EnhanceSpot,,,,,https://pypi.org/project/napari-DeepSpot,https://github.com/ebouilhol/napari-DeepSpot, -151,Demo plugin ported from npe2 example,0.2.5,,,napari-demo,napari hub team,team@napari-hub.org,BSD-3,,example plugin for napari plugin developers,>=3.7,"['pydantic', 'npe2', 'numpy']","# napari-demo +159,Demo plugin ported from npe2 example,0.2.5,,,napari-demo,napari hub team,team@napari-hub.org,BSD-3,,example plugin for napari plugin developers,>=3.7,"['pydantic', 'npe2', 'numpy']","# napari-demo [![License](https://img.shields.io/pypi/l/napari-demo.svg?color=green)](https://github.com/chanzuckerberg/napari-demo/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-demo.svg?color=green)](https://pypi.org/project/napari-demo) @@ -15520,7 +16190,7 @@ To report security issues, see [security](SECURITY.md) This project adheres to the Contributor Covenant [code of conduct](https://github.com/chanzuckerberg/.github/blob/master/CODE_OF_CONDUCT.md). By participating, you are expected to uphold this code. Please report unacceptable behavior to [opensource@chanzuckerberg.com](mailto:opensource@chanzuckerberg.com). ","['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Programming Language :: Python', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing', 'Operating System :: OS Independent', 'Framework :: napari']","['Source Code, https://github.com/chanzuckerberg/napari-demo']",napari-demo.some_reader,napari-demo.my_writer,napari-demo.image_arithmetic,napari-demo.generate_random_data,"['*.fzy', '*.fzzy']","['.tif', '.tiff']","['.pcd', '.e57']",https://pypi.org/project/napari-demo,, -152,DenoiSeg,0.0.1rc2,,,napari-denoiseg,"Tom Burke, Joran Deschamps",joran.deschamps@fht.org,BSD-3-Clause,,A napari plugin performing joint denoising and segmentation of microscopy images using DenoiSeg.,>=3.7,"['numpy', 'pyqtgraph', 'denoiseg (>=0.3.0)', 'bioimageio.core', 'magicgui', 'qtpy', 'napari-time-slicer (>=0.4.9)', 'napari (<=0.4.15)', 'vispy (<=0.9.6)', 'imageio (!=2.11.0,!=2.22.1,>=2.5.0)', 'tensorflow ; platform_system != ""Darwin"" or platform_machine != ""arm64""', 'tensorflow-macos ; platform_system == ""Darwin"" and platform_machine == ""arm64""', 'tensorflow-metal ; platform_system == ""Darwin"" and platform_machine == ""arm64""', ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-denoiseg +160,DenoiSeg,0.0.1rc2,,,napari-denoiseg,"Tom Burke, Joran Deschamps",joran.deschamps@fht.org,BSD-3-Clause,,A napari plugin performing joint denoising and segmentation of microscopy images using DenoiSeg.,>=3.7,"['numpy', 'pyqtgraph', 'denoiseg (>=0.3.0)', 'bioimageio.core', 'magicgui', 'qtpy', 'napari-time-slicer (>=0.4.9)', 'napari (<=0.4.15)', 'vispy (<=0.9.6)', 'imageio (!=2.11.0,!=2.22.1,>=2.5.0)', 'tensorflow ; platform_system != ""Darwin"" or platform_machine != ""arm64""', 'tensorflow-macos ; platform_system == ""Darwin"" and platform_machine == ""arm64""', 'tensorflow-metal ; platform_system == ""Darwin"" and platform_machine == ""arm64""', ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-denoiseg [![License](https://img.shields.io/pypi/l/napari-denoiseg.svg?color=green)](https://github.com/juglab/napari-denoiseg/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-denoiseg.svg?color=green)](https://pypi.org/project/napari-denoiseg) @@ -15594,7 +16264,7 @@ Distributed under the terms of the [BSD-3] license, [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Framework :: napari', 'Development Status :: 3 - Alpha', 'Intended Audience :: Science/Research', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/juglab/napari_denoiseg/issues', 'Documentation, https://juglab.github.io/napari-denoiseg/', 'Source Code, https://github.com/juglab/napari_denoiseg', 'User Support, https://github.com/juglab/napari_denoiseg/issues']",,,napari-denoiseg.make_train_widget,napari-denoiseg.denoiseg_data_2D_n0,,,,https://pypi.org/project/napari-denoiseg,, -153,DEXP,0.0.7,2022-04-01,2023-06-18,napari-dexp,Jordao Bragantini,jordao.bragantini@czbiohub.org,BSD-3,https://github.com/royerlab/napari-dexp,A simple plugin to use with napari,>=3.7,"['napari', 'napari-plugin-engine (>=0.1.4)', 'dexp', 'numpy']","# napari-DEXP +161,DEXP,0.0.7,2022-04-01,2023-06-18,napari-dexp,Jordao Bragantini,jordao.bragantini@czbiohub.org,BSD-3,https://github.com/royerlab/napari-dexp,A simple plugin to use with napari,>=3.7,"['napari', 'napari-plugin-engine (>=0.1.4)', 'dexp', 'numpy']","# napari-DEXP [![License](https://img.shields.io/pypi/l/napari-dexp.svg?color=green)](https://github.com/royerlab/napari-dexp/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-dexp.svg?color=green)](https://pypi.org/project/napari-dexp) @@ -15652,7 +16322,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']",,napari-dexp.get_reader,napari-dexp.write_image,,,"['*.zarr', '*.zarr.zip']",['.zarr'],['.zarr'],https://pypi.org/project/napari-dexp,https://github.com/royerlab/napari-dexp, -154,napari-dv,0.3.0,2022-02-02,2023-07-10,napari-dv,Talley Lambert,talley.lambert@gmail.com,MIT,https://github.com/tlambert03/napari-dv,Deltavision/MRC file reader for napari,>=3.7,"['mrc (>=0.2.0)', 'napari-plugin-engine (>=0.1.4)', ""numpy ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-dv +162,napari-dv,0.3.0,2022-02-02,2023-07-10,napari-dv,Talley Lambert,talley.lambert@gmail.com,MIT,https://github.com/tlambert03/napari-dv,Deltavision/MRC file reader for napari,>=3.7,"['mrc (>=0.2.0)', 'napari-plugin-engine (>=0.1.4)', ""numpy ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-dv [![License](https://img.shields.io/pypi/l/napari-dv.svg?color=green)](https://github.com/tlambert03/napari-dv/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-dv.svg?color=green)](https://pypi.org/project/napari-dv) @@ -15696,7 +16366,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 4 - Beta', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10']","['Bug Tracker, https://github.com/tlambert03/napari-dv/issues', 'Documentation, https://github.com/tlambert03/napari-dv#README.md', 'Source Code, https://github.com/tlambert03/napari-dv', 'User Support, https://github.com/tlambert03/napari-dv/issues']",napari-dv.get_reader,napari-dv.write_image,,,"['*.dv', '*.mrc']","['.dv', '.mrc']",,https://pypi.org/project/napari-dv,https://github.com/tlambert03/napari-dv, -155,napari-dvid,0.2.0,2022-02-10,2023-06-18,napari-dvid,Emma Zhou,emma@emmazhou.com,MIT,https://github.com/emmazhou/napari-dvid,"DVID loader for napari, from a url",>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'requests']","# napari-dvid +163,napari-dvid,0.2.0,2022-02-10,2023-06-18,napari-dvid,Emma Zhou,emma@emmazhou.com,MIT,https://github.com/emmazhou/napari-dvid,"DVID loader for napari, from a url",>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'requests']","# napari-dvid [![License](https://img.shields.io/pypi/l/napari-dvid.svg?color=green)](https://github.com/emmazhou/napari-dvid/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-dvid.svg?color=green)](https://pypi.org/project/napari-dvid) @@ -15766,7 +16436,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['Bug Tracker, https://github.com/emmazhou/napari-dvid/issues', 'Documentation, https://github.com/emmazhou/napari-dvid#README.md', 'Source Code, https://github.com/emmazhou/napari-dvid', 'User Support, https://github.com/emmazhou/napari-dvid/issues']",napari-dvid.napari_get_reader,,napari-dvid.UrlWidget,,['*'],,,https://pypi.org/project/napari-dvid,https://github.com/emmazhou/napari-dvid, -156,napari-dzi-zarr,0.1.2,2022-01-30,2023-06-18,napari-dzi-zarr,Trevor Manz,trevor.j.manz@gmail.com,BSD-3,https://github.com/manzt/napari-dzi-zarr,An experimental plugin for viewing Deep Zoom Images (DZI) with napari and zarr.,>=3.6,"['napari-plugin-engine (>=0.1.4)', 'numpy (>=0.1.19)', 'zarr (>=0.2.4)', 'dask[array] (>=2.23.0)', 'fsspec (>=0.8.0)', 'requests (>=2.24.0)', 'aiohttp (>=3.6.2)', 'imageio (>=2.9.0)']","# napari-dzi-zarr +164,napari-dzi-zarr,0.1.2,2022-01-30,2023-06-18,napari-dzi-zarr,Trevor Manz,trevor.j.manz@gmail.com,BSD-3,https://github.com/manzt/napari-dzi-zarr,An experimental plugin for viewing Deep Zoom Images (DZI) with napari and zarr.,>=3.6,"['napari-plugin-engine (>=0.1.4)', 'numpy (>=0.1.19)', 'zarr (>=0.2.4)', 'dask[array] (>=2.23.0)', 'fsspec (>=0.8.0)', 'requests (>=2.24.0)', 'aiohttp (>=3.6.2)', 'imageio (>=2.9.0)']","# napari-dzi-zarr [![License](https://img.shields.io/pypi/l/napari-dzi-zarr.svg?color=green)](https://github.com/napari/napari-dzi-zarr/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-dzi-zarr.svg?color=green)](https://pypi.org/project/napari-dzi-zarr) @@ -15834,7 +16504,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.6', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: Implementation :: CPython', 'Programming Language :: Python :: Implementation :: PyPy', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License', 'Framework :: napari']",,napari-dzi-zarr.napari_get_reader,,,,['*'],,,https://pypi.org/project/napari-dzi-zarr,https://github.com/manzt/napari-dzi-zarr, -157,eHooke,0.0.9,,,napari-ehooke,António Brito,antmsbrito95@gmail.com,BSD-3-Clause,,eHooke implementation within napari,>=3.8,"['numpy', 'magicgui', 'qtpy', 'napari[all]', 'tensorflow <=2.15.0', 'napari-skimage-regionprops', 'stardist-napari', 'scikit-learn', 'pandas', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-ehooke +165,eHooke,0.0.13,,,napari-ehooke,António Brito,antmsbrito95@gmail.com,BSD-3-Clause,,eHooke implementation within napari,>=3.8,"['numpy<2.0', 'magicgui==0.6.1', 'napari[all]', 'tensorflow<=2.15.0', 'napari-skimage-regionprops', 'stardist-napari==2022.12.6', 'scikit-learn', 'scikit-image==0.20.0', 'pandas', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# napari-ehooke [![License BSD-3](https://img.shields.io/pypi/l/napari-ehooke.svg?color=green)](https://github.com/antmsbrito/napari-ehooke/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-ehooke.svg?color=green)](https://pypi.org/project/napari-ehooke) @@ -15902,7 +16572,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/antmsbrito/napari-ehooke/issues', 'Documentation, https://github.com/antmsbrito/napari-ehooke#README.md', 'Source Code, https://github.com/antmsbrito/napari-ehooke', 'User Support, https://github.com/antmsbrito/napari-ehooke/issues']",,,napari-ehooke.compute_mask,napari-ehooke.phase_example,,,,https://pypi.org/project/napari-ehooke,, -158,napari-elementary-numpy-operations,0.0.5,2022-02-10,2023-06-18,napari-elementary-numpy-operations,"Marc Boucsein, Robin Koch",,BSD-3,https://github.com/MBPhys/napari-elementary-numpy-operations,"A napari plugin covers elementary numpy operations like swap axes, flip, sqeeze an array or rotate an arrays by 90° steps",>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'qtpy', 'superqt']","# napari-elementary-numpy-operations +166,napari-elementary-numpy-operations,0.0.5,2022-02-10,2023-06-18,napari-elementary-numpy-operations,"Marc Boucsein, Robin Koch",,BSD-3,https://github.com/MBPhys/napari-elementary-numpy-operations,"A napari plugin covers elementary numpy operations like swap axes, flip, sqeeze an array or rotate an arrays by 90° steps",>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'qtpy', 'superqt']","# napari-elementary-numpy-operations [![License](https://img.shields.io/pypi/l/napari-medical-image-formats.svg?color=green)](https://github.com/MBPhys/napari-elementary-numpy-operations/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-elementary-numpy-operations.svg?color=green)](https://pypi.org/project/napari-elementary-numpy-operations) @@ -15951,7 +16621,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']",,,,napari-elementary-numpy-operations.elementary_numpy,,,,,https://pypi.org/project/napari-elementary-numpy-operations,https://github.com/MBPhys/napari-elementary-numpy-operations, -159,napari-em-reader,0.1.0,2022-02-02,2023-06-18,napari-em-reader,Lorenzo Gaifas,brisvag@gmail.com,BSD-3,https://github.com/brisvag/napari-em-reader,A napari plugin to read .em files,>=3.6,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'emfile (>=0.2)']","# napari-em-reader +167,napari-em-reader,0.1.0,2022-02-02,2023-06-18,napari-em-reader,Lorenzo Gaifas,brisvag@gmail.com,BSD-3,https://github.com/brisvag/napari-em-reader,A napari plugin to read .em files,>=3.6,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'emfile (>=0.2)']","# napari-em-reader [![License](https://img.shields.io/pypi/l/napari-em-reader.svg?color=green)](https://github.com/brisvag/napari-em-reader/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-em-reader.svg?color=green)](https://pypi.org/project/napari-em-reader) @@ -16011,7 +16681,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']",,napari-em-reader.napari_get_reader,,,,['*'],,,https://pypi.org/project/napari-em-reader,https://github.com/brisvag/napari-em-reader, -160,EMD File Viewer,0.1.1,2023-12-04,2023-12-08,napari-EMD,Nicolette Shaw,shaw.nicki@gmail.com,BSD-3-Clause,https://pypi.org/project/napari-EMD/,A simple plugin to view .emd files in napari (Velox files),>=3.8,"['numpy', 'h5py', 'magicgui', 'ujson', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-EMD +168,EMD File Viewer,0.1.1,2023-12-04,2023-12-08,napari-EMD,Nicolette Shaw,shaw.nicki@gmail.com,BSD-3-Clause,https://pypi.org/project/napari-EMD/,A simple plugin to view .emd files in napari (Velox files),>=3.8,"['numpy', 'h5py', 'magicgui', 'ujson', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-EMD [![License BSD-3](https://img.shields.io/pypi/l/napari-EMD.svg?color=green)](https://github.com/NickiShaw/napari-EMD/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-EMD.svg?color=green)](https://pypi.org/project/napari-EMD) @@ -16090,7 +16760,7 @@ Images A and B show different frames in the same image stack, the metadata plugi [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']",,napari-EMD.get_reader,,napari-EMD.load_widget,,['*.emd'],,,https://pypi.org/project/napari-EMD/,, -161,Napari Error Reporter,0.3.1,2022-06-13,2023-06-18,napari-error-reporter,Talley Lambert,talley.lambert@gmail.com,BSD-3-Clause,https://github.com/tlambert03/napari-error-reporter,Opt-in automated bug/error reporting for napari,>=3.8,"['appdirs', 'qtpy', 'sentry-sdk', ""black ; extra == 'dev'"", ""flake8 ; extra == 'dev'"", ""flake8-docstrings ; extra == 'dev'"", ""ipython ; extra == 'dev'"", ""isort ; extra == 'dev'"", ""jedi (<0.18.0) ; extra == 'dev'"", ""mypy ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""pydocstyle ; extra == 'dev'"", ""pytest ; extra == 'dev'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'"", ""tox-conda ; extra == 'testing'""]","# 🐛 napari-error-reporter +169,Napari Error Reporter,0.3.1,2022-06-13,2023-06-18,napari-error-reporter,Talley Lambert,talley.lambert@gmail.com,BSD-3-Clause,https://github.com/tlambert03/napari-error-reporter,Opt-in automated bug/error reporting for napari,>=3.8,"['appdirs', 'qtpy', 'sentry-sdk', ""black ; extra == 'dev'"", ""flake8 ; extra == 'dev'"", ""flake8-docstrings ; extra == 'dev'"", ""ipython ; extra == 'dev'"", ""isort ; extra == 'dev'"", ""jedi (<0.18.0) ; extra == 'dev'"", ""mypy ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""pydocstyle ; extra == 'dev'"", ""pytest ; extra == 'dev'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'"", ""tox-conda ; extra == 'testing'""]","# 🐛 napari-error-reporter [![License](https://img.shields.io/pypi/l/napari-error-reporter.svg?color=green)](https://github.com/tlambert03/napari-error-reporter/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-error-reporter.svg?color=green)](https://pypi.org/project/napari-error-reporter) @@ -16578,7 +17248,7 @@ local variables and posted to https://github.com/napari/napari/issues Sentry retains event data for 90 days by default. For complete details, see Sentry's page on [Security & Compliance](https://sentry.io/security/) ","['Development Status :: 3 - Alpha', 'Framework :: napari', 'License :: OSI Approved :: BSD License', 'Natural Language :: English', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10']","['Source Code, https://github.com/tlambert03/napari-error-reporter']",,,,,,,,https://pypi.org/project/napari-error-reporter,https://github.com/tlambert03/napari-error-reporter, -162,Napari ExoDeepFinder,0.0.3,,,napari-exodeepfinder,"Constantin Aronssohn, Arthur Masson",cnstt@tutanota.com,GPL-3.0-only,,"A napari plugin for the ExpDeepFinder library which includes display, annotation, target generation, segmentation and clustering functionalities. An orthoslice view has been added for an easier visualisation and annotation process.",>=3.9,"['exodeepfinder >=0.2.5', 'numpy >=1.26.4', 'magicgui >=0.8.2', 'QtPy >=2.4.1', 'napari[all] >=0.4.19', 'scikit-image >=0.22.0', 'typing >=3.7.4.3', 'pandas >=2.2.2', 'lxml[html_clean] >=5.2.2', 'pillow >=10.3.0', 'h5py >=3.11.0', 'mrcfile >=1.5.0', 'scipy >=1.13.1', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'""]","# napari-exodeepfinder +170,Napari ExoDeepFinder,0.0.11,,,napari-exodeepfinder,"Constantin Aronssohn, Arthur Masson",cnstt@tutanota.com,GPL-3.0-only,,"A napari plugin for the ExpDeepFinder library which includes display, annotation, target generation, segmentation and clustering functionalities. An orthoslice view has been added for an easier visualisation and annotation process.",>=3.9,"['exodeepfinder>=0.3.11', 'typing>=3.7.4.3', 'pandas>=2.2.2', 'pillow>=10.3.0', 'napari[all]>=0.4.19; extra == ""all""', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari[all]>=0.4.19; extra == ""testing""']","# napari-exodeepfinder [![License GNU GPL v3.0](https://img.shields.io/pypi/l/napari-exodeepfinder.svg?color=green)](https://github.com/deep-finder/napari-exodeepfinder/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-exodeepfinder.svg?color=green)](https://pypi.org/project/napari-exodeepfinder) @@ -16590,8 +17260,6 @@ see Sentry's page on [Security & Compliance](https://sentry.io/security/) A napari plugin for the ExoDeepFinder library which includes display, annotation, target generation, segmentation and clustering functionalities. An orthoslice view has been added for an easier visualisation and annotation process. -**The documentation for users is available [here](https://deep-finder.github.io/napari-exodeepfinder/).** - ---------------------------------- This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template. @@ -16642,7 +17310,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 3 - Alpha', 'Intended Audience :: Education', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering', 'Topic :: Scientific/Engineering :: Visualization', 'Topic :: Scientific/Engineering :: Information Analysis', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Topic :: Scientific/Engineering :: Artificial Intelligence', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']","['Bug Tracker, https://github.com/deep-finder/napari-exodeepfinder/issues', 'Documentation, https://deep-finder.github.io/napari-exodeepfinder/', 'Source Code, https://github.com/deep-finder/napari-exodeepfinder', 'User Support, https://github.com/deep-finder/napari-exodeepfinder/issues']",napari-exodeepfinder.get_reader,napari-exodeepfinder.write_annotations,napari-exodeepfinder.make_reorder_widget,,"['*.mrc', '*.map', '*.rec', '*.h5', '*.tif', '*.TIF', '*.xml', '*.ods', '*.xls', '*.xlsx']",['.xml'],['.mrc'],https://pypi.org/project/napari-exodeepfinder,, -163,Explorer,0.0.2,,,napari-explorer,Tim Monko,timmonko@gmail.com,BSD-3-Clause,,"Browse files in a folder, filter, and open within napari",>=3.8,"['numpy', 'magicgui', 'qtpy', 'napari', 'napari-aicsimageio', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-explorer +171,Explorer,0.0.2,,,napari-explorer,Tim Monko,timmonko@gmail.com,BSD-3-Clause,,"Browse files in a folder, filter, and open within napari",>=3.8,"['numpy', 'magicgui', 'qtpy', 'napari', 'napari-aicsimageio', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-explorer [![License BSD-3](https://img.shields.io/pypi/l/napari-explorer.svg?color=green)](https://github.com/TimMonko/napari-explorer/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-explorer.svg?color=green)](https://pypi.org/project/napari-explorer) @@ -16704,7 +17372,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']",,,,napari-explorer.folder_explorer,,,,,https://pypi.org/project/napari-explorer,, -164,Fast4DReg,0.0.1,,,napari-fast4dreg,Marcel Issler,"marcel.issler@kuleuven.be, marcel.issler@vib.be",BSD-3-Clause,,"Dask empowered multidim, rigid registration for volumetric measurements",>=3.8,"['numpy', 'magicgui', 'qtpy', 'scikit-image', 'matplotlib', 'zarr', 'tqdm', 'scipy', 'pandas', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-fast4dreg +172,Fast4DReg,0.0.1,,,napari-fast4dreg,Marcel Issler,"marcel.issler@kuleuven.be, marcel.issler@vib.be",BSD-3-Clause,,"Dask empowered multidim, rigid registration for volumetric measurements",>=3.8,"['numpy', 'magicgui', 'qtpy', 'scikit-image', 'matplotlib', 'zarr', 'tqdm', 'scipy', 'pandas', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-fast4dreg [![License BSD-3](https://img.shields.io/pypi/l/napari-fast4dreg.svg?color=green)](https://github.com/Macl-I/napari-fast4dreg/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-fast4dreg.svg?color=green)](https://pypi.org/project/napari-fast4dreg) @@ -16796,7 +17464,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']",,napari-fast4dreg.get_reader,napari-fast4dreg.write_multiple,napari-fast4dreg.make_function_widget,napari-fast4dreg.make_sample_data,['*.npy'],,['.npy'],https://pypi.org/project/napari-fast4dreg,, -165,napari feature classifier,0.2.1,2022-06-16,2024-09-17,napari-feature-classifier,Joel Luethi and Max Hess,joel.luethi@uzh.ch,BSD-3-Clause,https://github.com/fractal-napari-plugins-collection/napari-feature-classifier,An interactive classifier plugin to use with label images and feature measurements,>=3.9,"['numpy<2.0', 'napari', 'matplotlib', 'magicgui', 'pandas', 'scikit-learn>=1.2.2', 'pandera<0.20.0', 'xxhash', 'hypothesis']","# napari-feature-classifier +173,napari feature classifier,0.2.1,2022-06-16,2024-09-17,napari-feature-classifier,Joel Luethi and Max Hess,joel.luethi@uzh.ch,BSD-3-Clause,https://github.com/fractal-napari-plugins-collection/napari-feature-classifier,An interactive classifier plugin to use with label images and feature measurements,>=3.9,"['numpy<2.0', 'napari', 'matplotlib', 'magicgui', 'pandas', 'scikit-learn>=1.2.2', 'pandera<0.20.0', 'xxhash', 'hypothesis']","# napari-feature-classifier [![License](https://img.shields.io/pypi/l/napari-feature-classifier.svg?color=green)](https://github.com/fractal-napari-plugins-collection/napari-feature-classifier/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-feature-classifier.svg?color=green)](https://pypi.org/project/napari-feature-classifier) @@ -16944,7 +17612,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/fractal-napari-plugins-collection/napari-feature-classifier/issues', 'Documentation, https://github.com/fractal-napari-plugins-collection/napari-feature-classifier#napari-feature-classifier', 'Source Code, https://github.com/fractal-napari-plugins-collection/napari-feature-classifier', 'User Support, https://github.com/fractal-napari-plugins-collection/napari-feature-classifier/issues']",,,napari-feature-classifier.annotator_init_widget,,,,,https://pypi.org/project/napari-feature-classifier,https://github.com/fractal-napari-plugins-collection/napari-feature-classifier, -166,Napari Feature Visualization,0.0.1,,,napari-feature-visualization,"Joel Luethi, Adrian Tschan",joel.luethi@uzh.ch," +174,Napari Feature Visualization,0.0.1,,,napari-feature-visualization,"Joel Luethi, Adrian Tschan",joel.luethi@uzh.ch," Copyright (c) 2024, Joel Luethi, Adrian Tschan All rights reserved. @@ -17044,7 +17712,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/fractal-napari-plugins-collection/napari-feature-visualization/issues', 'Documentation, https://github.com/fractal-napari-plugins-collection/napari-feature-visualization#README.md', 'Source Code, https://github.com/fractal-napari-plugins-collection/napari-feature-visualization', 'User Support, https://github.com/fractal-napari-plugins-collection/napari-feature-visualization/issues']",,,napari-feature-visualization.feature_vis,napari-feature-visualization.make_sample_data,,,,https://pypi.org/project/napari-feature-visualization,, -167,napari-features,0.1.4,2022-02-11,2023-06-18,napari-features,Allen Goodman,allen.goodman@icloud.com,MIT,https://github.com/0x00b1/napari-features,extracts image and object features,>=3.7,"['magicgui (>=0.2.9)', 'napari (>=0.4.10)', 'napari-plugin-engine (>=0.1.4)', 'numpy (>=1.19.5)', 'pandas (>=1.2.4)', 'qtpy (>=1.9.0)', 'scikit-image (>=0.18.1)', 'scipy (>=1.4.1)']","# napari-features +175,napari-features,0.1.4,2022-02-11,2023-06-18,napari-features,Allen Goodman,allen.goodman@icloud.com,MIT,https://github.com/0x00b1/napari-features,extracts image and object features,>=3.7,"['magicgui (>=0.2.9)', 'napari (>=0.4.10)', 'napari-plugin-engine (>=0.1.4)', 'numpy (>=1.19.5)', 'pandas (>=1.2.4)', 'qtpy (>=1.9.0)', 'scikit-image (>=0.18.1)', 'scipy (>=1.4.1)']","# napari-features [![License](https://img.shields.io/pypi/l/napari-features.svg?color=green)](https://github.com/0x00b1/napari-features/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-features.svg?color=green)](https://pypi.org/project/napari-features) @@ -17253,7 +17921,7 @@ An extensible, general-purpose feature extraction plug-in for the [Napari](https ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['Bug Tracker, https://github.com/0x00b1/napari-features/issues', 'Documentation, https://github.com/0x00b1/napari-features#README.md', 'Source Code, https://github.com/0x00b1/napari-features', 'User Support, https://github.com/0x00b1/napari-features/issues']",,,,,,,,https://pypi.org/project/napari-features,https://github.com/0x00b1/napari-features, -168,Features Selection GA,0.0.4,2023-04-12,2023-06-18,napari-features-selector,Sanjeev Kumar,kumar.san96@gmail.com,BSD-3-Clause,https://github.com/kumar-sanjeeev/napari-features-selector,A lightweight widget for features selection.,>=3.8,"['numpy', 'magicgui', 'qtpy', 'pandas', 'scikit-learn', 'sklearn-genetic-opt', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-features-selector +176,Features Selection GA,0.0.4,2023-04-12,2023-06-18,napari-features-selector,Sanjeev Kumar,kumar.san96@gmail.com,BSD-3-Clause,https://github.com/kumar-sanjeeev/napari-features-selector,A lightweight widget for features selection.,>=3.8,"['numpy', 'magicgui', 'qtpy', 'pandas', 'scikit-learn', 'sklearn-genetic-opt', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-features-selector [![License BSD-3](https://img.shields.io/pypi/l/napari-features-selector.svg?color=green)](https://github.com/kumar-sanjeeev/napari-features-selector/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-features-selector.svg?color=green)](https://pypi.org/project/napari-features-selector) @@ -17319,7 +17987,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/kumar-sanjeeev/napari-features-selector/issues', 'Documentation, https://github.com/kumar-sanjeeev/napari-features-selector#README.md', 'Source Code, https://github.com/kumar-sanjeeev/napari-features-selector', 'User Support, https://github.com/kumar-sanjeeev/napari-features-selector/issues']",,,napari-features-selector.gui_GA,,,,,https://pypi.org/project/napari-features-selector,https://github.com/kumar-sanjeeev/napari-features-selector, -169,Figure,0.1.1,,,napari-figure,romainGuiet,romain.guiet@epfl.ch,BSD-3-Clause,,Making Figure with napari more easily,>=3.8,"['numpy', 'magicgui', 'qtpy', 'microfilm', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-figure +177,Figure,0.1.1,,,napari-figure,romainGuiet,romain.guiet@epfl.ch,BSD-3-Clause,,Making Figure with napari more easily,>=3.8,"['numpy', 'magicgui', 'qtpy', 'microfilm', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-figure [![License BSD-3](https://img.shields.io/pypi/l/napari-figure.svg?color=green)](https://github.com/romainGuiet/napari-figure/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-figure.svg?color=green)](https://pypi.org/project/napari-figure) @@ -17387,7 +18055,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/BIOP/napari-figure/issues', 'Documentation, https://github.com/BIOP/napari-figure#README.md', 'Source Code, https://github.com/BIOP/napari-figure', 'User Support, https://github.com/BIOP/napari-figure/issues']",,,napari-figure.make_qwidget,,,,,https://pypi.org/project/napari-figure,, -170,napari 3D filament annotator,0.1.2,2022-12-30,2023-06-18,napari-filament-annotator,Anna Medyukhina,anna.medyukhina@gmail.com,Apache-2.0,https://github.com/amedyukhina/napari-filament-annotator,Annotation of filaments / curvilinear structures in 3D,>=3.8,"['Geometry3D', 'networkx', 'numpy', 'magicgui', 'pandas', 'qtpy', 'scipy', 'sklearn', 'imageio (!=2.22.1)', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# 3D Filament Annotator +178,napari 3D filament annotator,0.1.2,2022-12-30,2023-06-18,napari-filament-annotator,Anna Medyukhina,anna.medyukhina@gmail.com,Apache-2.0,https://github.com/amedyukhina/napari-filament-annotator,Annotation of filaments / curvilinear structures in 3D,>=3.8,"['Geometry3D', 'networkx', 'numpy', 'magicgui', 'pandas', 'qtpy', 'scipy', 'sklearn', 'imageio (!=2.22.1)', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# 3D Filament Annotator [![DOI](https://zenodo.org/badge/513980347.svg)](https://zenodo.org/badge/latestdoi/513980347) [![License Apache Software License 2.0](https://img.shields.io/pypi/l/napari-filament-annotator.svg?color=green)](https://github.com/amedyukhina/napari-filament-annotator/raw/main/LICENSE) @@ -17485,7 +18153,7 @@ https://napari.org/plugins/index.html [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 3 - Alpha', 'Framework :: napari', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/amedyukhina/napari-filament-annotator/issues', 'Documentation, https://github.com/amedyukhina/napari-filament-annotator#README.md', 'Source Code, https://github.com/amedyukhina/napari-filament-annotator', 'User Support, https://github.com/amedyukhina/napari-filament-annotator/issues']",,,napari-filament-annotator.make_annotator_widget,napari-filament-annotator.load_sample_image,,,,https://pypi.org/project/napari-filament-annotator,https://github.com/amedyukhina/napari-filament-annotator, -171,napari filaments,0.3.0,2022-07-11,2023-08-01,napari-filaments,Hanjin Liu,liuhanjin-sc@g.ecc.u-tokyo.ac.jp,BSD-3-Clause,https://github.com/hanjinliu/napari-filaments,A napari plugin for filament analysis,>=3.9,"['magic-class (>=0.7.3)', 'magicgui', 'matplotlib', 'numpy', 'qtpy', 'scipy', ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""roifile ; extra == 'testing'"", ""tox ; extra == 'testing'""]","# napari-filaments +179,napari filaments,0.3.0,2022-07-11,2023-08-01,napari-filaments,Hanjin Liu,liuhanjin-sc@g.ecc.u-tokyo.ac.jp,BSD-3-Clause,https://github.com/hanjinliu/napari-filaments,A napari plugin for filament analysis,>=3.9,"['magic-class (>=0.7.3)', 'magicgui', 'matplotlib', 'numpy', 'qtpy', 'scipy', ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""roifile ; extra == 'testing'"", ""tox ; extra == 'testing'""]","# napari-filaments [![License BSD-3](https://img.shields.io/pypi/l/napari-filaments.svg?color=green)](https://github.com/hanjinliu/napari-filaments/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-filaments.svg?color=green)](https://pypi.org/project/napari-filaments) @@ -17582,7 +18250,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Topic :: Software Development :: Testing']","['Bug Tracker, https://github.com/hanjinliu/napari-filaments/issues', 'Documentation, https://github.com/hanjinliu/napari-filaments#README.md', 'Source Code, https://github.com/hanjinliu/napari-filaments', 'User Support, https://github.com/hanjinliu/napari-filaments/issues']",,,napari-filaments.make_qwidget,,,,,https://pypi.org/project/napari-filaments,https://github.com/hanjinliu/napari-filaments, -172,napari-file-watcher,0.1.1,2023-11-07,2023-11-07,napari-file-watcher,Xavier Casas Moreno,xaviercm@kth.se,GPL-3.0,https://pypi.org/project/napari-file-watcher,A napari plugin for file watching,,"['napari', 'ome-zarr', 'zarr', 'h5py', 'PyQt5', 'qtpy', 'QScintilla']","# File watcher plugin for napari (napari-file-watcher) +180,napari-file-watcher,0.1.1,2023-11-07,2023-11-07,napari-file-watcher,Xavier Casas Moreno,xaviercm@kth.se,GPL-3.0,https://pypi.org/project/napari-file-watcher,A napari plugin for file watching,,"['napari', 'ome-zarr', 'zarr', 'h5py', 'PyQt5', 'qtpy', 'QScintilla']","# File watcher plugin for napari (napari-file-watcher) This plugin contains two widgets: file watcher and script editor. @@ -17634,7 +18302,102 @@ Contributions are welcome, tests are run with pytest. Issues can be reported at: https://github.com/kasasxav/napari-file-watcher/issues ","['Framework :: napari', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8']","['Bug Tracker, https://github.com/kasasxav/napari-file-watcher', 'Documentation, https://github.com/kasasxav/napari-file-watcher/blob/main/README.md', 'Source Code, https://github.com/kasasxav/napari-file-watcher', 'User Support, https://github.com/kasasxav/napari-file-watcher/issues']",,,napari-file-watcher.watcher_widget,,,,,https://pypi.org/project/napari-file-watcher,, -173,napari-findaureus,0.0.4,,,napari-findaureus,Shibarjun Mandal,shibarjunmandal@gmail.com,MIT,,Locate bacteria in CLSM obtained infected bone tissue images,>=3.8,"['magicgui', 'qtpy', 'napari[all]', 'aicsimageio ==4.11.0', 'nd2 ==0.5.3', 'aicspylibczi ==3.1.2', 'fsspec ==2023.5.0', 'readlif ==0.6.5', 'czifile ==2019.7.2', 'tifffile ==2023.7.10', 'webcolors ==1.13', 'opencv-python ==4.7.0.72', 'numpy ==1.24.3', 'scikit-image ==0.20.0', 'xmltodict', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-findaureus +181,Save multidimensional file as folder of tifs,0.0.1,,,napari-file2folder,Jules Vanaret,jules.vanaret@univ-amu.fr,MIT,,Save multidimensional file as folder of tifs,>=3.9,"['numpy', 'qtpy', 'magicgui', 'tifffile', 'bioio', 'bioio-ome-tiff', 'bioio-ome-zarr', 'bioio-nd2', 'bioio-czi', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# napari-file2folder + +[![License MIT](https://img.shields.io/pypi/l/napari-file2folder.svg?color=green)](https://github.com/jules-vanaret/napari-file2folder/raw/main/LICENSE) +[![PyPI](https://img.shields.io/pypi/v/napari-file2folder.svg?color=green)](https://pypi.org/project/napari-file2folder) +[![Python Version](https://img.shields.io/pypi/pyversions/napari-file2folder.svg?color=green)](https://python.org) +[![tests](https://github.com/jules-vanaret/napari-file2folder/workflows/tests/badge.svg)](https://github.com/jules-vanaret/napari-file2folder/actions) +[![codecov](https://codecov.io/gh/jules-vanaret/napari-file2folder/branch/main/graph/badge.svg)](https://codecov.io/gh/jules-vanaret/napari-file2folder) +[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-file2folder)](https://napari-hub.org/plugins/napari-file2folder) + + + +A plugin to inspect bioimages (e.g. .tif, .czi, .nd2, .lsm...) and save them as individual .tif files in a folder. + +`napari-file2folder` is a [napari] plugin that is part of the [Tapenade](https://github.com/GuignardLab/tapenade) project. Tapenade is a tool for the analysis of dense 3D tissues acquired with deep imaging microscopy. It is designed to be user-friendly and to provide a comprehensive analysis of the data. + +If you use this plugin for your research, please [cite us](https://github.com/GuignardLab/tapenade/blob/main/README.md#how-to-cite). + +## Overview + + + +This plugin allows you to inspect (possibly large) bioimages by displaying their shape (number of elements in each dimension), and allowing you to save each element along a chosen dimension as a separate .tif file in a folder. This is useful when you have a large movie or stack of images and you want to save each frame or slice as a separate file. Optionally, the plugin allows the user to visualize the middle element of a given dimension to help the user decide which dimension to save as separate files. + +The plugin currently supports the following file formats: +- .tif +- .ome.tiff +- .zarr +- .ome.zarr +- .nd2 +- .lsm +- .czi + +This plugin leverages [tifffile], [bioio], and [zarr] to circumvent loading the entire images in memory, which allows inspection of very large images. + +> [!CAUTION] +> When inspecting the middle element of a dimension, or when saving one element of a dimension as a separate file, the plugin loads the element in memory, which means that at least this lone element must fit in memory. + +## Installation + +The plugin obviously requires [napari] to run. If you don't have it yet, follow the instructions [here](https://napari.org/stable/tutorials/fundamentals/installation.html). + +The simplest way to install `napari-file2folder` is via the [napari] plugin manager. Open Napari, go to `Plugins > Install/Uninstall Packages...` and search for `napari-file2folder`. Click on the install button and you are ready to go! + +You can install `napari-file2folder` via [pip]: + + pip install napari-file2folder + + + + +## Contributing + +Contributions are very welcome. Tests can be run with [tox], please ensure +the coverage at least stays the same before you submit a pull request. + +## License + +Distributed under the terms of the [MIT] license, +""napari-file2folder"" is free and open source software + +## Issues + +If you encounter any problems, please [file an issue] along with a detailed description. + +---------------------------------- + +This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template. + + + +[napari]: https://github.com/napari/napari +[Cookiecutter]: https://github.com/audreyr/cookiecutter +[@napari]: https://github.com/napari +[MIT]: http://opensource.org/licenses/MIT +[BSD-3]: http://opensource.org/licenses/BSD-3-Clause +[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt +[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt +[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0 +[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt +[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin + +[napari]: https://github.com/napari/napari +[tox]: https://tox.readthedocs.io/en/latest/ +[pip]: https://pypi.org/project/pip/ +[PyPI]: https://pypi.org/ +[tifffile]: https://github.com/cgohlke/tifffile +[bioio]: https://github.com/bioio-devs/bioio +[zarr]: https://github.com/zarr-developers/zarr-python +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']",,,,napari-file2folder.make_qwidget,,,,,https://pypi.org/project/napari-file2folder,, +182,napari-findaureus,0.0.4,,,napari-findaureus,Shibarjun Mandal,shibarjunmandal@gmail.com,MIT,,Locate bacteria in CLSM obtained infected bone tissue images,>=3.8,"['magicgui', 'qtpy', 'napari[all]', 'aicsimageio ==4.11.0', 'nd2 ==0.5.3', 'aicspylibczi ==3.1.2', 'fsspec ==2023.5.0', 'readlif ==0.6.5', 'czifile ==2019.7.2', 'tifffile ==2023.7.10', 'webcolors ==1.13', 'opencv-python ==4.7.0.72', 'numpy ==1.24.3', 'scikit-image ==0.20.0', 'xmltodict', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-findaureus ""Findaureus"" is now available to use in napari.

@@ -17706,7 +18469,7 @@ Mandal S, Tannert A, Ebert C, Guliev RR, Ozegowski Y, Carvalho L, Wildemann B, E This project is a part of the European Union's Horizon 2020 research and innovation program under grant agreement No 861122 (ITN IMAGE-IN). We acknowledge support from the Jena Biophotonics and Imaging Laboratory (JBIL), from the European Union via EFRE funds within the Thüringer Innovationszentrum für Medizintechnik-Lösungen (ThIMEDOP, FKZ IZN 2018 0002), the BMBF via the funding program Photonics Research Germany (LPI, FKZ: 13N15713) and via the CSCC (FKZ 01EO1502) and the Institute of Anatomical and Molecular Pathology, University Coimbra, Portugal. ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']",,napari-findaureus.get_reader,,napari-findaureus.make_magic_widget,,"['*.czi', '*.nd2', '*.lif', '*.tiff']",,,https://pypi.org/project/napari-findaureus,, -174,FLIM phasor plotter,0.1.2,,,napari-flim-phasor-plotter,"Marcelo L. Zoccoler, Cornelia Wetzker",marzoccoler@gmail.com,BSD-3-Clause,,A plugin that performs phasor plot from TCSPC FLIM data.,>=3.9,"['numpy', 'magicgui', 'qtpy', 'napari>=0.4.19', 'napari-clusters-plotter>=0.8.1', 'ptufile', 'sdtfile', 'natsort', 'rocket-fft', 'dask', 'zarr', 'napari-segment-blobs-and-things-with-membranes', 'napari-skimage-regionprops', 'scikit-image>=0.20.0', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# napari-flim-phasor-plotter +183,FLIM phasor plotter,0.1.2,,,napari-flim-phasor-plotter,"Marcelo L. Zoccoler, Cornelia Wetzker",marzoccoler@gmail.com,BSD-3-Clause,,A plugin that performs phasor plot from TCSPC FLIM data.,>=3.9,"['numpy', 'magicgui', 'qtpy', 'napari>=0.4.19', 'napari-clusters-plotter>=0.8.1', 'ptufile', 'sdtfile', 'natsort', 'rocket-fft', 'dask', 'zarr', 'napari-segment-blobs-and-things-with-membranes', 'napari-skimage-regionprops', 'scikit-image>=0.20.0', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# napari-flim-phasor-plotter [![License BSD-3](https://img.shields.io/pypi/l/napari-flim-phasor-plotter.svg?color=green)](https://github.com/zoccoler/napari-flim-phasor-plotter/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-flim-phasor-plotter.svg?color=green)](https://pypi.org/project/napari-flim-phasor-plotter) @@ -17927,7 +18690,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/zoccoler/napari-flim-phasor-plotter/issues', 'Documentation, https://github.com/zoccoler/napari-flim-phasor-plotter#README.md', 'Source Code, https://github.com/zoccoler/napari-flim-phasor-plotter', 'User Support, https://github.com/zoccoler/napari-flim-phasor-plotter/issues']",napari-flim-phasor-plotter.get_reader,,napari-flim-phasor-plotter.calculate_phasors,napari-flim-phasor-plotter.load_seminal_receptacle_image,"['*.ptu', '*.PTU', '*.sdt', '*.SDT', '*.tif', '*.zarr']",,,https://pypi.org/project/napari-flim-phasor-plotter,, -175,napari-folder-browser,0.1.4,2022-02-04,2023-06-18,napari-folder-browser,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,https://github.com/haesleinhuepf/napari-folder-browser,Browse folders of images and open them using double-click,>=3.7,"['napari-plugin-engine >=0.1.4', 'napari-tools-menu']","# napari-folder-browser +184,napari-folder-browser,0.1.4,2022-02-04,2023-06-18,napari-folder-browser,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,https://github.com/haesleinhuepf/napari-folder-browser,Browse folders of images and open them using double-click,>=3.7,"['napari-plugin-engine >=0.1.4', 'napari-tools-menu']","# napari-folder-browser [![License](https://img.shields.io/pypi/l/napari-folder-browser.svg?color=green)](https://github.com/haesleinhuepf/napari-folder-browser/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-folder-browser.svg?color=green)](https://pypi.org/project/napari-folder-browser) @@ -18002,7 +18765,7 @@ If you encounter any problems, please create a thread on [image.sc] along with a [@haesleinhuepf]: https://twitter.com/haesleinhuepf ","['Development Status :: 3 - Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/haesleinhuepf/napari-folder-browser/issues', 'Documentation, https://github.com/haesleinhuepf/napari-folder-browser#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-folder-browser', 'User Support, https://github.com/haesleinhuepf/napari-folder-browser/issues']",,,napari-folder-browser.FolderBrowser,,,,,https://pypi.org/project/napari-folder-browser,https://github.com/haesleinhuepf/napari-folder-browser, -176,GEMspa,0.0.4,2023-12-08,2023-12-09,napari-gemspa,Sarah Keegan,sarah.keegan@nyulangone.org,BSD-3-Clause,https://github.com/liamholtlab/napari-gemspa,A plugin for analysis of single particle tracking experiments,>=3.8,"['numpy', 'magicgui', 'qtpy', 'pandas', 'napari', 'scikit-image', 'gemspa-spt', 'matplotlib', 'trackpy', 'nd2', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-gemspa +185,GEMspa,0.0.4,2023-12-08,2023-12-09,napari-gemspa,Sarah Keegan,sarah.keegan@nyulangone.org,BSD-3-Clause,https://github.com/liamholtlab/napari-gemspa,A plugin for analysis of single particle tracking experiments,>=3.8,"['numpy', 'magicgui', 'qtpy', 'pandas', 'napari', 'scikit-image', 'gemspa-spt', 'matplotlib', 'trackpy', 'nd2', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-gemspa This plugin provides for analysis tools for data from single particle tracking experiments. It provides an interface for particle localization and tracking using [trackpy](http://soft-matter.github.io/trackpy/dev/index.html). It also allows for import of tracking data from Mosaic and Trackmate. These files must be tab/comma delimited text files. It provides an option to exclude particles/tracks masked with a labels layer. @@ -18171,7 +18934,7 @@ Here is an example: ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/liamholtlab/napari-gemspa/issues', 'Documentation, https://github.com/liamholtlab/napari-gemspa#README.md', 'Source Code, https://github.com/liamholtlab/napari-gemspa', 'User Support, https://github.com/liamholtlab/napari-gemspa/issues']",napari-gemspa.get_reader,napari-gemspa.write_points,napari-gemspa.make_gemspa_plugin,,"['*.txt', '*.csv', '*.tsv']","['.txt', '.csv', '.tsv']","['.txt', '.csv', '.tsv']",https://pypi.org/project/napari-gemspa,https://github.com/liamholtlab/napari-gemspa, -177,napari generic SIMulator,0.1.3,2022-08-18,2023-06-18,napari-generic-SIMulator,Meizhu Liang,ml2618@ic.ac.uk,BSD-3-Clause,https://github.com/Meizhu-Liang/napari-generic-SIMulator,A napari plugin to simulate raw-image stacks of Structured illumination microscopy (SIM).,>=3.8,"['numpy', 'magicgui', 'qtpy', 'tifffile', 'opt-einsum', 'matplotlib', 'pypcd-imp', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""', 'tifffile; extra == ""testing""', 'pypcd-imp; extra == ""testing""', 'opt-einsum; extra == ""testing""', 'matplotlib; extra == ""testing""']","# napari-generic-SIMulator +186,napari generic SIMulator,0.1.3,2022-08-18,2023-06-18,napari-generic-SIMulator,Meizhu Liang,ml2618@ic.ac.uk,BSD-3-Clause,https://github.com/Meizhu-Liang/napari-generic-SIMulator,A napari plugin to simulate raw-image stacks of Structured illumination microscopy (SIM).,>=3.8,"['numpy', 'magicgui', 'qtpy', 'tifffile', 'opt-einsum', 'matplotlib', 'pypcd-imp', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""', 'tifffile; extra == ""testing""', 'pypcd-imp; extra == ""testing""', 'opt-einsum; extra == ""testing""', 'matplotlib; extra == ""testing""']","# napari-generic-SIMulator [![License BSD-3](https://img.shields.io/pypi/l/napari-generic-SIMulator.svg?color=green)](https://github.com/Meizhu-Liang/napari-generic-SIMulator/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-generic-SIMulator.svg?color=green)](https://pypi.org/project/napari-generic-SIMulator) @@ -18298,7 +19061,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10']","['Bug Tracker, https://github.com/Meizhu-Liang/napari-generic-SIMulator/issues', 'Documentation, https://github.com/Meizhu-Liang/napari-generic-SIMulator#README.md', 'Source Code, https://github.com/Meizhu-Liang/napari-generic-SIMulator', 'User Support, https://github.com/Meizhu-Liang/napari-generic-SIMulator/issues']",,,napari-generic-SIMulator.make_pointcloud_widget,,,,,https://pypi.org/project/napari-generic-SIMulator,https://github.com/Meizhu-Liang/napari-generic-SIMulator, -178,napari-geojson,0.1.3,2022-01-31,2023-06-18,napari-geojson,Tim Morello,tdmorello@gmail.com,BSD-3-Clause,https://github.com/tdmorello/napari-geojson,Read and write geojson files in napari,>=3.8,"['geojson', 'numpy', ""black ; extra == 'dev'"", ""flake8 ; extra == 'dev'"", ""flake8-black ; extra == 'dev'"", ""flake8-docstrings ; extra == 'dev'"", ""flake8-isort ; extra == 'dev'"", ""isort ; extra == 'dev'"", ""mypy ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""pytest ; extra == 'dev'"", ""pytest-cov ; extra == 'dev'"", ""pytest-qt ; extra == 'dev'"", ""tox ; extra == 'dev'"", ""napari[all] ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]","# napari-geojson +187,napari-geojson,0.1.3,2022-01-31,2023-06-18,napari-geojson,Tim Morello,tdmorello@gmail.com,BSD-3-Clause,https://github.com/tdmorello/napari-geojson,Read and write geojson files in napari,>=3.8,"['geojson', 'numpy', ""black ; extra == 'dev'"", ""flake8 ; extra == 'dev'"", ""flake8-black ; extra == 'dev'"", ""flake8-docstrings ; extra == 'dev'"", ""flake8-isort ; extra == 'dev'"", ""isort ; extra == 'dev'"", ""mypy ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""pytest ; extra == 'dev'"", ""pytest-cov ; extra == 'dev'"", ""pytest-qt ; extra == 'dev'"", ""tox ; extra == 'dev'"", ""napari[all] ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]","# napari-geojson [![License](https://img.shields.io/pypi/l/napari-geojson.svg?color=green)](https://github.com/tdmorello/napari-geojson/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-geojson.svg?color=green)](https://pypi.org/project/napari-geojson) @@ -18368,7 +19131,103 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 3 - Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/tdmorello/napari-geojson/issues', 'Documentation, https://github.com/tdmorello/napari-geojson#README.md', 'Source Code, https://github.com/tdmorello/napari-geojson', 'User Support, https://github.com/tdmorello/napari-geojson/issues']",napari-geojson.get_reader,napari-geojson.write_shapes,,,['*.geojson'],['.geojson'],,https://pypi.org/project/napari-geojson,https://github.com/tdmorello/napari-geojson, -179,Griottes,0.4.1,2023-04-17,2023-06-18,napari-griottes,Andrey Aristov,aaristov@pasteur.fr,BSD-3-Clause,https://github.com/aaristov/napari-griottes,Create graphs,>=3.8,"['griottes', 'networkx', 'numpy', 'pandas (<2)']","# napari-griottes +188,Grid cropping napari plugin,0.0.1,,,napari-grid-cropping,Niklas Breitenbach-Netter,niknett@gmail.com," +Copyright (c) 2024, Niklas Breitenbach-Netter +All rights reserved. + +Redistribution and use in source and binary forms, with or without +modification, are permitted provided that the following conditions are met: + +* Redistributions of source code must retain the above copyright notice, this + list of conditions and the following disclaimer. + +* Redistributions in binary form must reproduce the above copyright notice, + this list of conditions and the following disclaimer in the documentation + and/or other materials provided with the distribution. + +* Neither the name of copyright holder nor the names of its + contributors may be used to endorse or promote products derived from + this software without specific prior written permission. + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ""AS IS"" +AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE +IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE +DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE +FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL +DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR +SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER +CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, +OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE +OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. +",,Create multiple crops of an image in a grid like fashion.,>=3.9,"['numpy', 'qtpy', 'tifffile', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""', 'magicgui; extra == ""testing""']","# napari-grid-cropping + +[![License BSD-3](https://img.shields.io/pypi/l/napari-grid-cropping.svg?color=green)](https://github.com/gatoniel/napari-grid-cropping/raw/main/LICENSE) +[![PyPI](https://img.shields.io/pypi/v/napari-grid-cropping.svg?color=green)](https://pypi.org/project/napari-grid-cropping) +[![Python Version](https://img.shields.io/pypi/pyversions/napari-grid-cropping.svg?color=green)](https://python.org) +[![tests](https://github.com/gatoniel/napari-grid-cropping/workflows/tests/badge.svg)](https://github.com/gatoniel/napari-grid-cropping/actions) +[![codecov](https://codecov.io/gh/gatoniel/napari-grid-cropping/branch/main/graph/badge.svg)](https://codecov.io/gh/gatoniel/napari-grid-cropping) +[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-grid-cropping)](https://napari-hub.org/plugins/napari-grid-cropping) + +Create multiple crops of an image in a grid like fashion. + +---------------------------------- + +This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template. + + + +## Installation + +You can install `napari-grid-cropping` via [pip]: + + pip install napari-grid-cropping + + + +To install latest development version : + + pip install git+https://github.com/gatoniel/napari-grid-cropping.git + + +## Contributing + +Contributions are very welcome. Tests can be run with [tox], please ensure +the coverage at least stays the same before you submit a pull request. + +## License + +Distributed under the terms of the [BSD-3] license, +""napari-grid-cropping"" is free and open source software + +## Issues + +If you encounter any problems, please [file an issue] along with a detailed description. + +[napari]: https://github.com/napari/napari +[Cookiecutter]: https://github.com/audreyr/cookiecutter +[@napari]: https://github.com/napari +[MIT]: http://opensource.org/licenses/MIT +[BSD-3]: http://opensource.org/licenses/BSD-3-Clause +[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt +[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt +[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0 +[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt +[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin + +[file an issue]: https://github.com/gatoniel/napari-grid-cropping/issues + +[napari]: https://github.com/napari/napari +[tox]: https://tox.readthedocs.io/en/latest/ +[pip]: https://pypi.org/project/pip/ +[PyPI]: https://pypi.org/ +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/gatoniel/napari-grid-cropping/issues', 'Documentation, https://github.com/gatoniel/napari-grid-cropping#README.md', 'Source Code, https://github.com/gatoniel/napari-grid-cropping', 'User Support, https://github.com/gatoniel/napari-grid-cropping/issues']",,,napari-grid-cropping.make_grid_widget,,,,,https://pypi.org/project/napari-grid-cropping,, +189,Griottes,0.4.1,2023-04-17,2023-06-18,napari-griottes,Andrey Aristov,aaristov@pasteur.fr,BSD-3-Clause,https://github.com/aaristov/napari-griottes,Create graphs,>=3.8,"['griottes', 'networkx', 'numpy', 'pandas (<2)']","# napari-griottes [![License](https://img.shields.io/pypi/l/napari-griottes.svg?color=green)](https://github.com/BaroudLab/napari-griottes/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-griottes.svg?color=green)](https://pypi.org/project/napari-griottes) @@ -18494,7 +19353,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['Bug Tracker, https://github.com/aaristov/napari-griottes/issues', 'Documentation, https://github.com/aaristov/napari-griottes#README.md', 'Source Code, https://github.com/aaristov/napari-griottes', 'User Support, https://github.com/aaristov/napari-griottes/issues']",napari-griottes.get_reader,napari-griottes.save_graph,napari-griottes.make_graph,napari-griottes.make_cell_properties,"['*.json', '*.npy', '*.tif', '*.tiff', '*.csv', '*.griottes']",['.json'],,https://pypi.org/project/napari-griottes,https://github.com/aaristov/napari-griottes, -180,napari Gruvbox,0.1.1,2023-04-05,2023-06-18,napari-gruvbox,Lorenzo Gaifas,brisvag@gmail.com,GPL-3.0-only,https://github.com/brisvag/napari-gruvbox,Gruvbox theme for napari.,>=3.8,['pygments (>=2.9)'],"# napari-gruvbox +190,napari Gruvbox,0.1.1,2023-04-05,2023-06-18,napari-gruvbox,Lorenzo Gaifas,brisvag@gmail.com,GPL-3.0-only,https://github.com/brisvag/napari-gruvbox,Gruvbox theme for napari.,>=3.8,['pygments (>=2.9)'],"# napari-gruvbox [![License GNU GPL v3.0](https://img.shields.io/pypi/l/napari-gruvbox.svg?color=green)](https://github.com/brisvag/napari-gruvbox/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-gruvbox.svg?color=green)](https://pypi.org/project/napari-gruvbox) @@ -18562,7 +19421,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/brisvag/napari-gruvbox/issues', 'Documentation, https://github.com/brisvag/napari-gruvbox#README.md', 'Source Code, https://github.com/brisvag/napari-gruvbox', 'User Support, https://github.com/brisvag/napari-gruvbox/issues']",,,,,,,,https://pypi.org/project/napari-gruvbox,https://github.com/brisvag/napari-gruvbox, -181,napari-h5,0.0.8,2023-10-29,2024-07-11,napari-h5,Luis Perdigao,luis.perdigao@rfi.ac.uk,Apache-2.0,https://pypi.org/project/napari-h5,A hdf5 file reader plugin for napari,>=3.8,"['numpy', 'h5py', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-h5 +191,napari-h5,0.0.8,2023-10-29,2024-07-11,napari-h5,Luis Perdigao,luis.perdigao@rfi.ac.uk,Apache-2.0,https://pypi.org/project/napari-h5,A hdf5 file reader plugin for napari,>=3.8,"['numpy', 'h5py', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-h5 [![License Apache Software License 2.0](https://img.shields.io/pypi/l/napari-h5.svg?color=green)](https://github.com/rosalindfranklininstitute/napari-h5/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-h5.svg?color=green)](https://pypi.org/project/napari-h5) @@ -18632,7 +19491,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/rosalindfranklininstitute/napari-h5/issues', 'Documentation, https://github.com/rosalindfranklininstitute/napari-h5#readme', 'Source Code, https://github.com/rosalindfranklininstitute/napari-h5', 'User Support, https://github.com/rosalindfranklininstitute/napari-h5/issues']",napari-h5.get_reader,napari-h5.multi_layer_writer,,,['*.h5'],['.h5'],['.h5'],https://pypi.org/project/napari-h5,, -182,napari-hdf5-labels-io,0.3.dev16,2022-02-23,2023-06-18,napari-hdf5-labels-io,"Duway Nicolas Lesmes Leon, Pranjal Dhole","dlesmesleon@hotmail.com, dhole.pranjal@gmail.com",GNU GPL v3.0,https://github.com/yapic/napari-hdf5-labels-io,Napari plugin to store set of layers in a .h5 file. Label layer are stored in a sparse representation.,<3.9,"['napari-plugin-engine (>=0.1.4)', 'typing', 'numpy', 'sparse', 'h5py (==2.10.0)', 'zarr']","# napari-hdf5-labels-io +192,napari-hdf5-labels-io,0.3.dev16,2022-02-23,2023-06-18,napari-hdf5-labels-io,"Duway Nicolas Lesmes Leon, Pranjal Dhole","dlesmesleon@hotmail.com, dhole.pranjal@gmail.com",GNU GPL v3.0,https://github.com/yapic/napari-hdf5-labels-io,Napari plugin to store set of layers in a .h5 file. Label layer are stored in a sparse representation.,<3.9,"['napari-plugin-engine (>=0.1.4)', 'typing', 'numpy', 'sparse', 'h5py (==2.10.0)', 'zarr']","# napari-hdf5-labels-io [![License](https://img.shields.io/pypi/l/napari-hdf5-labels-io.svg?color=green)](https://github.com/yapic/napari-hdf5-labels-io/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-hdf5-labels-io.svg?color=green)](https://pypi.org/project/napari-hdf5-labels-io) @@ -18704,7 +19563,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']",,napari-hdf5-labels-io.h5_to_napari,napari-hdf5-labels-io.napari_write_image,,,['*'],,,https://pypi.org/project/napari-hdf5-labels-io,https://github.com/yapic/napari-hdf5-labels-io, -183,napari Help,0.1.0,2022-08-18,2023-06-18,napari-help,Lorenzo Gaifas,brisvag@gmail.com,GPL-3.0,https://github.com/brisvag/napari-help,Helpful tooltips for napari.,>=3.8,"['napari', 'qtpy', ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]","# napari-help +193,napari Help,0.1.0,2022-08-18,2023-06-18,napari-help,Lorenzo Gaifas,brisvag@gmail.com,GPL-3.0,https://github.com/brisvag/napari-help,Helpful tooltips for napari.,>=3.8,"['napari', 'qtpy', ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]","# napari-help [![License GNU GPL v3.0](https://img.shields.io/pypi/l/napari-help.svg?color=green)](https://github.com/brisvag/napari-help/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-help.svg?color=green)](https://pypi.org/project/napari-help) @@ -18772,7 +19631,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/brisvag/napari-help/issues', 'Documentation, https://github.com/brisvag/napari-help#README.md', 'Source Code, https://github.com/brisvag/napari-help', 'User Support, https://github.com/brisvag/napari-help/issues']",,,napari-help.help_widget,,,,,https://pypi.org/project/napari-help,https://github.com/brisvag/napari-help, -184,napari-hierarchical,0.1.0,2023-04-17,2023-06-18,napari-hierarchical,Jonas Windhager,jonas.windhager@uzh.ch,MIT,https://github.com/BodenmillerGroup/napari-hierarchical,Hierarchical file format support for napari,"<3.11,>=3.8","['napari (<0.4.18,>=0.4.17)', 'pluggy', 'qtpy', ""dask ; extra == 'all'"", ""h5py ; extra == 'all'"", ""readimc ; extra == 'all'"", ""s3fs ; extra == 'all'"", ""zarr ; extra == 'all'"", ""dask ; extra == 'hdf5'"", ""h5py ; extra == 'hdf5'"", ""dask ; extra == 'imc'"", ""readimc ; extra == 'imc'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""dask ; extra == 'zarr'"", ""s3fs ; extra == 'zarr'"", ""zarr ; extra == 'zarr'""]","# napari-hierarchical +194,napari-hierarchical,0.1.0,2023-04-17,2023-06-18,napari-hierarchical,Jonas Windhager,jonas.windhager@uzh.ch,MIT,https://github.com/BodenmillerGroup/napari-hierarchical,Hierarchical file format support for napari,"<3.11,>=3.8","['napari (<0.4.18,>=0.4.17)', 'pluggy', 'qtpy', ""dask ; extra == 'all'"", ""h5py ; extra == 'all'"", ""readimc ; extra == 'all'"", ""s3fs ; extra == 'all'"", ""zarr ; extra == 'all'"", ""dask ; extra == 'hdf5'"", ""h5py ; extra == 'hdf5'"", ""dask ; extra == 'imc'"", ""readimc ; extra == 'imc'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""dask ; extra == 'zarr'"", ""s3fs ; extra == 'zarr'"", ""zarr ; extra == 'zarr'""]","# napari-hierarchical [![License MIT](https://img.shields.io/pypi/l/napari-hierarchical.svg?color=green)](https://github.com/BodenmillerGroup/napari-hierarchical/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-hierarchical.svg?color=green)](https://pypi.org/project/napari-hierarchical) @@ -18842,7 +19701,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Framework :: napari', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/BodenmillerGroup/napari-hierarchical/issues', 'Documentation, https://github.com/BodenmillerGroup/napari-hierarchical#README.md', 'Source Code, https://github.com/BodenmillerGroup/napari-hierarchical', 'User Support, https://github.com/BodenmillerGroup/napari-hierarchical/issues']",napari-hierarchical.get_reader,,napari-hierarchical.make_groups_widget,napari-hierarchical.sample_data.imc_mock,['*'],,,https://pypi.org/project/napari-hierarchical,https://github.com/BodenmillerGroup/napari-hierarchical, -185,Hippo,0.2.0,,,napari-hippo,Sam Thiele,s.thiele@hzdr.de,MIT,,A fat and clumsy collection of hyperspectral tools,>=3.8,"['natsort', 'hylite', 'numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""hylite ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-hippo +195,Hippo,0.2.0,,,napari-hippo,Sam Thiele,s.thiele@hzdr.de,MIT,,A fat and clumsy collection of hyperspectral tools,>=3.8,"['natsort', 'hylite', 'numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""hylite ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-hippo | | [![License MIT](https://img.shields.io/pypi/l/napari-hippo.svg?color=green)](https://github.com/samthiele/napari-hippo/blob/main/LICENSE) | [![PyPI](https://img.shields.io/pypi/v/napari-hippo.svg?color=green)](https://pypi.org/project/napari-hippo) | [![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-hippo)](https://napari-hub.org/plugins/napari-hippo) @@ -18883,11 +19742,11 @@ If you encounter any problems, please [file an issue](https://github.com/samthie A citation for `napari-hippo` will be announced shortly. ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']",,napari-hippo.get_ENVI_reader,napari-hippo.write_multiple,napari-hippo.make_IOTools,napari-hippo.make_sample_data,"['*.hdr', '*.dat', '*.png', '*.jpg', '*.jpeg', '*.bmp']",,"['.dat', '.hdr']",https://pypi.org/project/napari-hippo,, -186,Hough circle detector,0.0.5,2023-04-17,2023-09-06,napari-hough-circle-detector,Florian Aymanns,florian.aymanns@epfl.ch,,https://pypi.org/project/napari-hough-circle-detector/,An interactive Hough transform for napari.,,"['napari[all]', 'opencv-contrib-python-headless', 'numpy', 'pyqt5', 'scikit-image']","# napari-hough-circle-detector +196,Hough circle detector,0.0.5,2023-04-17,2023-09-06,napari-hough-circle-detector,Florian Aymanns,florian.aymanns@epfl.ch,,https://pypi.org/project/napari-hough-circle-detector/,An interactive Hough transform for napari.,,"['napari[all]', 'opencv-contrib-python-headless', 'numpy', 'pyqt5', 'scikit-image']","# napari-hough-circle-detector A plugin for napari that detects circles using the Hough transform. ",['Framework :: napari'],,,,napari-hough-circle-detector.CircleDetectorWidget,,,,,https://pypi.org/project/napari-hough-circle-detector/,, -187,napari IDS,0.0.8,,,napari-IDS,Tristan Cotte,tristan.cotte@sgs.com,BSD-3,,Plug in which enables to take photo with IDS uEye camera,>=3.8,"['opencv-python', 'numpy']","# napari-IDS +197,napari IDS,0.0.8,,,napari-IDS,Tristan Cotte,tristan.cotte@sgs.com,BSD-3,,Plug in which enables to take photo with IDS uEye camera,>=3.8,"['opencv-python', 'numpy']","# napari-IDS [![License](https://img.shields.io/pypi/l/napari-IDS.svg?color=green)](https://github.com/githubuser/napari-IDS/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-IDS.svg?color=green)](https://pypi.org/project/napari-IDS) @@ -18967,7 +19826,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/tcotte/napari-IDS/issues', 'Documentation, https://github.com/tcotte/napari-IDS#README.md', 'Source Code, https://github.com/tcotte/napari-IDS', 'User Support, https://github.com/tcotte/napari-IDS/issues']",,,napari-IDS.make_qwidget,,,,,https://pypi.org/project/napari-IDS,, -188,napari-image-stacker,0.1.10,2022-02-04,2023-06-18,napari-image-stacker,"Robin Koch, Marc Boucsein",robin.koch@dkfz-heidelberg.de,BSD3,https://github.com/RobAnKo/napari-image-stacker,A plugin designed to convert multiple open layers into a stack or vice versa,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy']","# napari-image-stacker +198,napari-image-stacker,0.1.10,2022-02-04,2023-06-18,napari-image-stacker,"Robin Koch, Marc Boucsein",robin.koch@dkfz-heidelberg.de,BSD3,https://github.com/RobAnKo/napari-image-stacker,A plugin designed to convert multiple open layers into a stack or vice versa,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy']","# napari-image-stacker [![License](https://img.shields.io/pypi/l/napari-image-stacker.svg?color=green)](https://github.com/RobAnKo/napari-image-stacker/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-image-stacker.svg?color=green)](https://pypi.org/project/napari-image-stacker) @@ -19020,7 +19879,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/RobAnKo/napari-image-stacker/issues', 'Documentation, https://github.com/RobAnKo/napari-image-stacker#README.md', 'Source Code, https://github.com/RobAnKo/napari-image-stacker', 'User Support, https://github.com/RobAnKo/napari-image-stacker/issues']",,,napari-image-stacker.image_stacker_widget,,,,,https://pypi.org/project/napari-image-stacker,https://github.com/RobAnKo/napari-image-stacker, -189,napari-imagej,0.1.0,2023-06-27,2023-06-27,napari-imagej,ImageJ2 developers,ImageJ2 developers ,BSD-2-Clause,https://github.com/imagej/napari-imagej,ImageJ functionality from napari,"<=3.11.0,>=3.8","['confuse', 'imglyb (>=2.1.0)', 'jpype1 (>=1.4.1)', 'labeling (>=0.1.12)', 'magicgui (>=0.5.1)', 'napari (>=0.4.17)', 'numpy', 'pandas', 'pyimagej (>=1.4.1)', 'scyjava (>=1.8.1)', 'qtconsole (!=5.4.2)', 'typing-extensions (!=4.6.0)', ""autopep8 ; extra == 'dev'"", ""black (>=23.1.0) ; extra == 'dev'"", ""build ; extra == 'dev'"", ""flake8 ; extra == 'dev'"", ""flake8-pyproject ; extra == 'dev'"", ""flake8-typing-imports ; extra == 'dev'"", ""isort ; extra == 'dev'"", ""myst-parser ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""pyqt5 ; extra == 'dev'"", ""pytest ; extra == 'dev'"", ""pytest-cov ; extra == 'dev'"", ""pytest-env ; extra == 'dev'"", ""pytest-qt ; extra == 'dev'"", ""sphinx ; extra == 'dev'"", ""sphinx-copybutton ; extra == 'dev'"", ""sphinx-rtd-theme ; extra == 'dev'"", ""qtpy ; extra == 'dev'"", ""validate-pyproject[all] ; extra == 'dev'""]","# napari-imagej +199,napari-imagej,0.1.0,2023-06-27,2024-12-21,napari-imagej,ImageJ2 developers,ImageJ2 developers ,BSD-2-Clause,https://github.com/imagej/napari-imagej,ImageJ functionality from napari,"<=3.11.0,>=3.8","['confuse', 'imglyb (>=2.1.0)', 'jpype1 (>=1.4.1)', 'labeling (>=0.1.12)', 'magicgui (>=0.5.1)', 'napari (>=0.4.17)', 'numpy', 'pandas', 'pyimagej (>=1.4.1)', 'scyjava (>=1.8.1)', 'qtconsole (!=5.4.2)', 'typing-extensions (!=4.6.0)', ""autopep8 ; extra == 'dev'"", ""black (>=23.1.0) ; extra == 'dev'"", ""build ; extra == 'dev'"", ""flake8 ; extra == 'dev'"", ""flake8-pyproject ; extra == 'dev'"", ""flake8-typing-imports ; extra == 'dev'"", ""isort ; extra == 'dev'"", ""myst-parser ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""pyqt5 ; extra == 'dev'"", ""pytest ; extra == 'dev'"", ""pytest-cov ; extra == 'dev'"", ""pytest-env ; extra == 'dev'"", ""pytest-qt ; extra == 'dev'"", ""sphinx ; extra == 'dev'"", ""sphinx-copybutton ; extra == 'dev'"", ""sphinx-rtd-theme ; extra == 'dev'"", ""qtpy ; extra == 'dev'"", ""validate-pyproject[all] ; extra == 'dev'""]","# napari-imagej ### A [napari] plugin for access to [ImageJ2] @@ -19103,7 +19962,7 @@ Distributed under the terms of the [BSD-2] license, [SciJava Scripts]: https://imagej.net/scripting [tox]: https://tox.readthedocs.io/ ","['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Operating System :: Microsoft :: Windows', 'Operating System :: Unix', 'Operating System :: MacOS', 'License :: OSI Approved :: BSD License', 'Topic :: Scientific/Engineering', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Visualization', 'Topic :: Software Development :: Libraries :: Java Libraries', 'Topic :: Software Development :: Libraries :: Python Modules']","['homepage, https://github.com/imagej/napari-imagej', 'documentation, https://github.com/imagej/napari-imagej#README.md', 'source, https://github.com/imagej/napari-imagej', 'download, https://pypi.org/project/napari-imagej/', 'tracker, https://github.com/imagej/napari-imagej/issues']",napari-imagej.get_trackmate_reader,,napari-imagej.func,,['*.xml'],,,https://pypi.org/project/napari-imagej,https://github.com/imagej/napari-imagej, -190,napari-imaris-loader,0.1.8,2022-02-13,2023-06-18,napari-imaris-loader,Alan M Watson,alan.watson@pitt.edu,BSD-3-Clause,https://github.com/AlanMWatson/napari-imaris-loader,Napari plugin for loading Bitplane imaris files '.ims',>=3.8,"['napari[all]', 'napari-plugin-engine (>=0.1.4)', 'imaris-ims-file-reader (>=0.1.5)', 'numpy', 'h5py', 'dask']"," +200,napari-imaris-loader,0.1.8,2022-02-13,2023-06-18,napari-imaris-loader,Alan M Watson,alan.watson@pitt.edu,BSD-3-Clause,https://github.com/AlanMWatson/napari-imaris-loader,Napari plugin for loading Bitplane imaris files '.ims',>=3.8,"['napari[all]', 'napari-plugin-engine (>=0.1.4)', 'imaris-ims-file-reader (>=0.1.5)', 'numpy', 'h5py', 'dask']"," # Description @@ -19230,7 +20089,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/AlanMWatson/napari-imaris-loader/issues', 'Documentation, https://github.com/AlanMWatson/napari-imaris-loader#README.md', 'Source Code, https://github.com/AlanMWatson/napari-imaris-loader', 'User Support, https://github.com/AlanMWatson/napari-imaris-loader/issues']",napari-imaris-loader.napari_get_reader,,napari-imaris-loader.resolution_change,,['*'],,,https://pypi.org/project/napari-imaris-loader,https://github.com/AlanMWatson/napari-imaris-loader, -191,napari-imc,0.6.5,2022-02-02,2023-06-18,napari-imc,Jonas Windhager,jonas.windhager@uzh.ch,MIT,https://github.com/BodenmillerGroup/napari-imc,Imaging Mass Cytometry (IMC) file type support for napari,>=3.8,"['numpy', 'qtpy', 'readimc', 'superqt']","# napari-imc +201,napari-imc,0.6.5,2022-02-02,2023-06-18,napari-imc,Jonas Windhager,jonas.windhager@uzh.ch,MIT,https://github.com/BodenmillerGroup/napari-imc,Imaging Mass Cytometry (IMC) file type support for napari,>=3.8,"['numpy', 'qtpy', 'readimc', 'superqt']","# napari-imc [![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-imc)](https://napari-hub.org/plugins/napari-imc) [![PyPI](https://img.shields.io/pypi/v/napari-imc.svg?color=green)](https://pypi.org/project/napari-imc) @@ -19294,7 +20153,7 @@ Please cite the following paper when using napari-imc in your work: [MIT](https://github.com/BodenmillerGroup/napari-imc/blob/main/LICENSE.md) ","['Development Status :: 4 - Beta', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['Bug Tracker, https://github.com/BodenmillerGroup/napari-imc/issues', 'Documentation, https://github.com/BodenmillerGroup/napari-imc#README.md', 'Source Code, https://github.com/BodenmillerGroup/napari-imc', 'User Support, https://github.com/BodenmillerGroup/napari-imc/issues']",napari-imc.get_reader,,napari-imc.IMCWidget,,"['*.mcd', '*.txt']",,,https://pypi.org/project/napari-imc,https://github.com/BodenmillerGroup/napari-imc, -192,Napari Imod Model,1.0.2,,,napari-imodmodel,Moritz Wachsmuth-Melm,mail@moritzwm.de,BSD-3-Clause,,Open IMOD model files in napari,>=3.8,"['numpy', 'imodmodel', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-imodmodel +202,Napari Imod Model,1.0.2,,,napari-imodmodel,Moritz Wachsmuth-Melm,mail@moritzwm.de,BSD-3-Clause,,Open IMOD model files in napari,>=3.8,"['numpy', 'imodmodel', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-imodmodel [![License BSD-3](https://img.shields.io/pypi/l/napari-imodmodel.svg?color=green)](https://github.com/MoritzWM/napari-imodmodel/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-imodmodel.svg?color=green)](https://pypi.org/project/napari-imodmodel) @@ -19362,7 +20221,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/MoritzWM/napari-imodmodel/issues', 'Documentation, https://github.com/MoritzWM/napari-imodmodel#README.md', 'Source Code, https://github.com/MoritzWM/napari-imodmodel', 'User Support, https://github.com/MoritzWM/napari-imodmodel/issues']",napari-imodmodel.get_reader,,,napari-imodmodel.make_sample_data,['*.mod'],,,https://pypi.org/project/napari-imodmodel,, -193,napari-imsmicrolink,0.1.9,2022-02-07,2023-06-18,napari-imsmicrolink,Nathan Heath Patterson,heath.patterson@vanderbilt.edu,MIT,https://github.com/nhpatterson/napari-imsmicrolink,Plugin to perform IMS to microscopy registration using laser ablation marks.,>=3.8,"['numpy', 'tifffile', 'dask', 'zarr (>=2.10.3)', 'qtpy', 'aicsimageio[bioformats]', 'bioformats-jar', 'SimpleITK', 'pandas', 'h5py', 'opencv-python', 'czifile', 'imagecodecs', 'napari[all]']","# napari-imsmicrolink +203,napari-imsmicrolink,0.1.9,2022-02-07,2023-06-18,napari-imsmicrolink,Nathan Heath Patterson,heath.patterson@vanderbilt.edu,MIT,https://github.com/nhpatterson/napari-imsmicrolink,Plugin to perform IMS to microscopy registration using laser ablation marks.,>=3.8,"['numpy', 'tifffile', 'dask', 'zarr (>=2.10.3)', 'qtpy', 'aicsimageio[bioformats]', 'bioformats-jar', 'SimpleITK', 'pandas', 'h5py', 'opencv-python', 'czifile', 'imagecodecs', 'napari[all]']","# napari-imsmicrolink ![microlink-logo-update](https://user-images.githubusercontent.com/17855764/146078168-dd557089-ff10-46d6-b24d-268f5d21a9ee.png) [![License](https://img.shields.io/pypi/l/napari-imsmicrolink.svg?color=green)](https://github.com/nhpatterson/napari-imsmicrolink/raw/master/LICENSE) @@ -19442,7 +20301,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['Bug Tracker, https://github.com/nhpatterson/napari-imsmicrolink/issues', 'Documentation, https://github.com/nhpatterson/napari-imsmicrolink#README.md', 'Source Code, https://github.com/nhpatterson/napari-imsmicrolink', 'User Support, https://github.com/nhpatterson/napari-imsmicrolink/issues']",,,napari-imsmicrolink.IMSMicroLink,,,,,https://pypi.org/project/napari-imsmicrolink,https://github.com/nhpatterson/napari-imsmicrolink, -194,indices,0.0.2,2023-12-08,2023-12-08,napari-indices,Emmanuella OKAFOR,eokafor010@gmail.com,BSD-3-Clause,https://pypi.org/project/napari-indices,Calculer les indices de végétation,>=3.8,"['numpy', 'magicgui', 'qtpy', 'spectral', 'matplotlib', 'tifffile', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-indices +204,indices,0.0.2,2023-12-08,2023-12-08,napari-indices,Emmanuella OKAFOR,eokafor010@gmail.com,BSD-3-Clause,https://pypi.org/project/napari-indices,Calculer les indices de végétation,>=3.8,"['numpy', 'magicgui', 'qtpy', 'spectral', 'matplotlib', 'tifffile', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-indices [![License BSD-3](https://img.shields.io/pypi/l/napari-indices.svg?color=green)](https://github.com/Emmanulla0/napari-indices/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-indices.svg?color=green)](https://pypi.org/project/napari-indices) @@ -19530,7 +20389,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/Emmanulla0/napari-indices/issues', 'Documentation, https://github.com/Emmanulla0/napari-indices#README.md', 'Source Code, https://github.com/Emmanulla0/napari-indices', 'User Support, https://github.com/Emmanulla0/napari-indices/issues']",napari-indices.get_reader,napari-indices.write_multiple,napari-indices.make_qwidget,napari-indices.make_sample_data,['*.npy'],,['.npy'],https://pypi.org/project/napari-indices,, -195,Input Visualizer,0.0.1,,,napari-input-visualizer,David Bauer,dbauer@brc.hu,BSD-3-Clause,,Visualize keyboard and mouse button presses,>=3.8,"['numpy', 'magicgui', 'qtpy', 'napari', 'imageio-ffmpeg', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-input-visualizer +205,Input Visualizer,0.0.1,,,napari-input-visualizer,David Bauer,dbauer@brc.hu,BSD-3-Clause,,Visualize keyboard and mouse button presses,>=3.8,"['numpy', 'magicgui', 'qtpy', 'napari', 'imageio-ffmpeg', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-input-visualizer [![License BSD-3](https://img.shields.io/pypi/l/napari-input-visualizer.svg?color=green)](https://github.com/bauerdavid/napari-input-visualizer/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-input-visualizer.svg?color=green)](https://pypi.org/project/napari-input-visualizer) @@ -19606,7 +20465,117 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/bauerdavid/napari-input-visualizer/issues', 'Documentation, https://github.com/bauerdavid/napari-input-visualizer#README.md', 'Source Code, https://github.com/bauerdavid/napari-input-visualizer', 'User Support, https://github.com/bauerdavid/napari-input-visualizer/issues']",,,napari-input-visualizer.input_visualizer_widget,,,,,https://pypi.org/project/napari-input-visualizer,, -196,Image Processing Workflow,0.0.3,2022-07-06,2023-06-18,napari-IP-workflow,Jay Unruh,jru@stowers.org,GPL-3.0-only,https://github.com/jayunruh/napari-IP-workflow,"A plugin to do image preprocessing, segmentation, and measurements on other images.",>=3.8,"['numpy', 'magicgui', 'qtpy', 'pandas', 'skimage', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-IP-workflow +206,Intensity Plotter,0.1.6,,,napari-intensity-plotter,Toranosuke Takagi,toranporin_1224@yahoo.co.jp," +Copyright (c) 2024, Toranosuke Takagi +All rights reserved. + +Redistribution and use in source and binary forms, with or without +modification, are permitted provided that the following conditions are met: + +* Redistributions of source code must retain the above copyright notice, this + list of conditions and the following disclaimer. + +* Redistributions in binary form must reproduce the above copyright notice, + this list of conditions and the following disclaimer in the documentation + and/or other materials provided with the distribution. + +* Neither the name of copyright holder nor the names of its + contributors may be used to endorse or promote products derived from + this software without specific prior written permission. + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ""AS IS"" +AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE +IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE +DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE +FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL +DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR +SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER +CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, +OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE +OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. +",,A plugin for plotting intensity profiles with control features in napari.,>=3.9,"['numpy', 'magicgui', 'qtpy', 'scikit-image', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""', 'pyqtgraph; extra == ""testing""']","# napari-intensity-plotter + +[![License BSD-3](https://img.shields.io/pypi/l/napari-intensity-plotter.svg?color=green)](https://github.com/Tbrn1103/napari-intensity-plotter/raw/main/LICENSE) +[![PyPI](https://img.shields.io/pypi/v/napari-intensity-plotter.svg?color=green)](https://pypi.org/project/napari-intensity-plotter) +[![Python Version](https://img.shields.io/pypi/pyversions/napari-intensity-plotter.svg?color=green)](https://python.org) +[![tests](https://github.com/Tbrn1103/napari-intensity-plotter/workflows/tests/badge.svg)](https://github.com/Tbrn1103/napari-intensity-plotter/actions) +[![codecov](https://codecov.io/gh/Tbrn1103/napari-intensity-plotter/branch/main/graph/badge.svg)](https://codecov.io/gh/Tbrn1103/napari-intensity-plotter) +[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-intensity-plotter)](https://napari-hub.org/plugins/napari-intensity-plotter) + +# napari-intensity-plotter + +**napari-intensity-plotter** is a plugin for **[napari](https://napari.org)** that provides tools to measure and plot intensity profiles in 2D time-series images. + +![Intensity Plot Widget](images/intensity_plot_widget_example.png) + +*Screenshot: Intensity profile of a region of interest in a 2D time-series image.* + +## Features + +- **Intensity Plot Widget**: Allows you to select a region of interest in a 2D time-series image and plot the intensity profile over time. +- **Intensity Plot Control Widget**: Lets you fine-tune plot parameters and save the results as CSV or PNG files. + +## Installation + +You can install `napari-intensity-plotter` via pip: + +```bash +pip install napari-intensity-plotter +``` + +Alternatively, you can install it directly from the napari plugin interface. + +### Usage + +1. **Load a 2D Time-Series Image** + Load a 2D time-series image (e.g., fluorescence microscopy data) in napari. + +2. **Activate the Widgets** + Open the `Intensity Plot Widget` and `Intensity Plot Control Widget` from the `Plugins` menu in napari. + +3. **Intensity Plot Widget** + - Move your mouse over the image, or click on a specific location to plot the intensity profile of the selected region across slices (e.g., time). + - The region of interest (ROI) size can be adjusted using the square size setting in the control widget. + +4. **Intensity Plot Control Widget** + - Configure the square size for the ROI (ensures that the region size remains odd). + - Set the directory to save plots and intensity data. + - Save the intensity profile as a `.csv` or `.png` file by clicking the corresponding buttons or using keyboard shortcuts (`Ctrl+S`). + +5. **Additional Controls** + - Hide all layers using the `Hide All Layers` button or `Ctrl+D`. + - Use the rectangle to visualize the selected ROI. + +### Example Workflow + +**Step 1**: Load a 2D time-series image (e.g., `tif` or `nd2`) into napari. Ensure the layer is visible. + +**Step 2**: Open the `Intensity Plot Widget` to visualize intensity changes over time or slices for a specific ROI. + +**Step 3**: Use the `Intensity Plot Control Widget` to: +- Adjust the square size for the ROI. +- Specify a directory to save intensity data. +- Enable saving in CSV or PNG formats. + +**Step 4**: Save the plotted intensity data by clicking `Save to CSV/PNG` or pressing `Ctrl+S`. + +**Step 5**: Hide all layers if necessary using `Hide All Layers` or `Ctrl+D`. + +## Contributing + +Contributions are welcome! If you encounter issues or have ideas for new features, please submit them via the [GitHub Issues](https://github.com/Tbrn1103/napari-intensity-plotter/issues). + +## Acknowledgements + +This plugin was developed using the **napari plugin cookiecutter template**, which greatly streamlined the creation of this tool. See the [cookiecutter-napari-plugin](https://github.com/napari/cookiecutter-napari-plugin) for more details. + +Special thanks to the napari community for their continuous support and resources. + +## License + +This project is licensed under the BSD 3-Clause License. See the [LICENSE](LICENSE) file for details. +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/Tbrn1103/napari-intensity-plotter/issues', 'Documentation, https://github.com/Tbrn1103/napari-intensity-plotter#README.md', 'Source Code, https://github.com/Tbrn1103/napari-intensity-plotter', 'User Support, https://github.com/Tbrn1103/napari-intensity-plotter/issues']",,,napari-intensity-plotter.IntensityPlotWidget,,,,,https://pypi.org/project/napari-intensity-plotter,, +207,Image Processing Workflow,0.0.3,2022-07-06,2023-06-18,napari-IP-workflow,Jay Unruh,jru@stowers.org,GPL-3.0-only,https://github.com/jayunruh/napari-IP-workflow,"A plugin to do image preprocessing, segmentation, and measurements on other images.",>=3.8,"['numpy', 'magicgui', 'qtpy', 'pandas', 'skimage', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-IP-workflow [![License](https://img.shields.io/pypi/l/napari-IP-workflow.svg?color=green)](https://github.com/jayunruh/napari-IP-workflow/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-IP-workflow.svg?color=green)](https://pypi.org/project/napari-IP-workflow) @@ -19686,7 +20655,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']","['Bug Tracker, https://github.com/jayunruh/napari-IP-workflow/issues', 'Documentation, https://github.com/jayunruh/napari-IP-workflow#README.md', 'Source Code, https://github.com/jayunruh/napari-IP-workflow', 'User Support, https://github.com/jayunruh/napari-IP-workflow/issues']",,,napari-ip-workflow.segwidget,,,,,https://pypi.org/project/napari-IP-workflow,https://github.com/jayunruh/napari-IP-workflow, -197,Napari-ISM,1.0.7,2022-06-16,2023-09-07,napari-ISM,Alessandro Zunino,Alessandro Zunino ,,https://github.com/VicidominiLab/napari-ISM,A Napari plugin for analysing and simulating ISM images,>=3.7,"['numpy', 'scipy', 'h5py', 'PyQt5', 'brighteyes-ism >=1.2.2', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-ISM +208,Napari-ISM,1.0.7,2022-06-16,2023-09-07,napari-ISM,Alessandro Zunino,Alessandro Zunino ,,https://github.com/VicidominiLab/napari-ISM,A Napari plugin for analysing and simulating ISM images,>=3.7,"['numpy', 'scipy', 'h5py', 'PyQt5', 'brighteyes-ism >=1.2.2', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-ISM [![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-ISM)](https://napari-hub.org/plugins/napari-ISM) [![License](https://img.shields.io/pypi/l/napari-ISM.svg?color=green)](https://github.com/VicidominiLab/napari-ISM/raw/main/LICENSE) @@ -19823,7 +20792,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [BrightEyes-ISM]: https://github.com/VicidominiLab/BrightEyes-ISM [MCS software]: https://github.com/VicidominiLab/BrightEyes-MCS ","['Framework :: napari', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 or later (GPLv3+)']","['Homepage, https://github.com/VicidominiLab/napari-ism', 'Documentation, https://brighteyes-ism.readthedocs.io']",napari-ISM.get_reader,napari-ISM.write_multiple,napari-ISM.APR_stack,napari-ISM.make_sample_data,"['*.npy', '*.h5']",,"['.npy', '.h5']",https://pypi.org/project/napari-ISM,https://github.com/VicidominiLab/napari-ISM, -198,napari-itk-io,0.3.0,2022-04-01,2023-07-26,napari-itk-io,Matt McCormick,matt.mccormick@kitware.com,Apache-2.0,https://github.com/InsightSoftwareConsortium/napari-itk-io,File IO with itk for napari,>=3.8,"['numpy', 'napari-plugin-engine (>=0.2.0)', 'itk-io (>=5.2.0)', 'itk-napari-conversion']","# napari-itk-io +209,napari-itk-io,0.4.1,2022-04-01,2024-11-16,napari-itk-io,Matt McCormick,matt.mccormick@kitware.com,Apache-2.0,https://github.com/InsightSoftwareConsortium/napari-itk-io,File IO with itk for napari,>=3.8,"['numpy', 'napari-plugin-engine>=0.2.0', 'itk-io>=5.2.0', 'itk-napari-conversion']","# napari-itk-io [![License](https://img.shields.io/pypi/l/napari-itk-io.svg?color=green)](https://github.com/InsightSoftwareConsortium/napari-itk-io/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-itk-io.svg?color=green)](https://pypi.org/project/napari-itk-io) @@ -19899,8 +20868,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -","['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: Apache Software License']",,napari-itk-io.get_reader,napari-itk-io.write_multiple,,,['*'],,['.nii'],https://pypi.org/project/napari-itk-io,https://github.com/InsightSoftwareConsortium/napari-itk-io, -199,napari-J,0.3,2022-02-11,2023-06-18,napari-J,Volker Baecker,volker.baecker@mri.cnrs.fr,MIT,https://github.com/MontpellierRessourcesImagerie/napari-J,A plugin to exchange data with FIJI and to use FIJI image analysis from napari,>=3.7,"['JPype1 (>=1.2.1)', 'matplotlib', 'imageio-ffmpeg', ""matplotlib ; extra == 'testing'"", ""imageio-ffmpeg ; extra == 'testing'"", ""python-matplotlib-qt5 ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'""]","# napari-J +","['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Programming Language :: Python :: 3.13', 'Operating System :: OS Independent', 'License :: OSI Approved :: Apache Software License']",,napari-itk-io.get_reader,napari-itk-io.write_multiple,,,"['*.bmp', '*.dcm', '*.dicom', '*.gipl', '*.gipl.gz', '*.h5', '*.hdf5', '*.hdr', '*.jpg', '*.jpeg', '*.lsm', '*.mnc', '*.mnc.gz', '*.mnc2', '*.mgh', '*.mgz', '*.mgh.gz', '*.mha', '*.mhd', '*.mrc', '*.nia', '*.hdr', '*.nhdr', '*.nii', '*.nii.gz', '*.nrrd', '*.pic', '*.png', '*.tif', '*.tiff', '*.vtk']",,"['.bmp', '.dcm', '.dicom', '.gipl', '.gipl.gz', '.h5', '.hdf5', '.hdr', '.jpg', '.jpeg', '.lsm', '.mnc', '.mnc.gz', '.mnc2', '.mgh', '.mgz', '.mgh.gz', '.mha', '.mhd', '.mrc', '.nia', '.hdr', '.nhdr', '.nii', '.nii.gz', '.nrrd', '.pic', '.png', '.tif', '.tiff', '.vtk']",https://pypi.org/project/napari-itk-io,https://github.com/InsightSoftwareConsortium/napari-itk-io, +210,napari-J,0.3,2022-02-11,2023-06-18,napari-J,Volker Baecker,volker.baecker@mri.cnrs.fr,MIT,https://github.com/MontpellierRessourcesImagerie/napari-J,A plugin to exchange data with FIJI and to use FIJI image analysis from napari,>=3.7,"['JPype1 (>=1.2.1)', 'matplotlib', 'imageio-ffmpeg', ""matplotlib ; extra == 'testing'"", ""imageio-ffmpeg ; extra == 'testing'"", ""python-matplotlib-qt5 ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'""]","# napari-J [![License](https://img.shields.io/pypi/l/napari-J.svg?color=green)](https://github.com/MontpellierRessourcesImagerie/napari-J/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-J.svg?color=green)](https://pypi.org/project/napari-J) @@ -19970,7 +20939,7 @@ If you encounter any problems, please [file an issue](https://github.com/Montpel [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 4 - Beta', 'Intended Audience :: Science/Research', 'Topic :: Scientific/Engineering', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Framework :: napari']","['Bug Tracker, https://github.com/MontpellierRessourcesImagerie/napari-J/issues', 'Documentation, https://github.com/MontpellierRessourcesImagerie/napari-J#README.md', 'Source Code, https://github.com/MontpellierRessourcesImagerie/napari-J', 'User Support, https://github.com/MontpellierRessourcesImagerie/napari-J/issues']",,,napari-J.Connection,,,,,https://pypi.org/project/napari-J,https://github.com/MontpellierRessourcesImagerie/napari-J, -200,napari-kics,0.0.3rc6,2022-07-06,2023-06-18,napari-kics,Alexandr Dibrov,dibrov@mpi-cbg.de,BSD-3-Clause,https://github.com/mpicbg-csbd/napari-kics,A plugin to estimate chromosome sizes from karyotype images.,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari[all]', 'scikit-image', 'pandas', 'pulp', 'pyqtgraph']","# napari-kics +211,napari-kics,0.0.3rc6,2022-07-06,2023-06-18,napari-kics,Alexandr Dibrov,dibrov@mpi-cbg.de,BSD-3-Clause,https://github.com/mpicbg-csbd/napari-kics,A plugin to estimate chromosome sizes from karyotype images.,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari[all]', 'scikit-image', 'pandas', 'pulp', 'pyqtgraph']","# napari-kics ![napari-kics](https://github.com/mpicbg-csbd/napari-kics/raw/main/docs/banner.png?sanitize=true&raw=true) @@ -20096,7 +21065,7 @@ https://user-images.githubusercontent.com/17703905/139654249-685703b5-2196-4a73- ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']",,,,napari-kics.KaryotypeWidget,napari-kics.load_sample_data,,,,https://pypi.org/project/napari-kics,https://github.com/mpicbg-csbd/napari-kics, -201,Kernel Learning Deconvolution,1.1.0,,,napari-kld,Qiqi Lu,136303971@qq.com," +212,Kernel Learning Deconvolution,1.1.0,,,napari-kld,Qiqi Lu,136303971@qq.com," Copyright (c) 2024, Qiqi Lu All rights reserved. @@ -20495,7 +21464,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']",,napari-kld.get_reader,napari-kld.write_multiple,napari-kld.rldwidget,napari-kld.make_sample_data,['*.npy'],,['.npy'],https://pypi.org/project/napari-kld,, -202,napari label interpolator,0.1.1,2023-03-27,2023-06-18,napari-label-interpolator,Lorenzo Gaifas,brisvag@gmail.com,GPL-3.0-only,https://github.com/brisvag/napari-label-interpolator,A napari plugin to interpolate any number of nd-labels across a single dimension.,>=3.8,"['magicgui', 'edt', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-label-interpolator +213,napari label interpolator,0.1.1,2023-03-27,2023-06-18,napari-label-interpolator,Lorenzo Gaifas,brisvag@gmail.com,GPL-3.0-only,https://github.com/brisvag/napari-label-interpolator,A napari plugin to interpolate any number of nd-labels across a single dimension.,>=3.8,"['magicgui', 'edt', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-label-interpolator [![License GNU GPL v3.0](https://img.shields.io/pypi/l/napari-label-interpolator.svg?color=green)](https://github.com/brisvag/napari-label-interpolator/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-label-interpolator.svg?color=green)](https://pypi.org/project/napari-label-interpolator) @@ -20567,7 +21536,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/brisvag/napari-label-interpolator/issues', 'Documentation, https://github.com/brisvag/napari-label-interpolator#README.md', 'Source Code, https://github.com/brisvag/napari-label-interpolator', 'User Support, https://github.com/brisvag/napari-label-interpolator/issues']",,,napari-label-interpolator.make_widget,,,,,https://pypi.org/project/napari-label-interpolator,https://github.com/brisvag/napari-label-interpolator, -203,napari-labelimg4classification,0.1.1,2022-02-02,2023-06-18,napari-labelimg4classification,Hiroki Kawai,h.kawai888@gmail.com,MIT,https://github.com/hiroalchem/napari-labelimg4classification,Image-Level labeling tool,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'napari', 'numpy', 'napari-tools-menu', 'pandas']","# napari-labelimg4classification +214,napari-labelimg4classification,0.1.1,2022-02-02,2023-06-18,napari-labelimg4classification,Hiroki Kawai,h.kawai888@gmail.com,MIT,https://github.com/hiroalchem/napari-labelimg4classification,Image-Level labeling tool,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'napari', 'numpy', 'napari-tools-menu', 'pandas']","# napari-labelimg4classification [![License](https://img.shields.io/pypi/l/napari-labelimg4classification.svg?color=green)](https://github.com/hiroalchem/napari-labelimg4classification/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-labelimg4classification.svg?color=green)](https://pypi.org/project/napari-labelimg4classification) @@ -20650,7 +21619,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['Bug Tracker, https://github.com/hiroalchem/napari-labelimg4classification/issues', 'Documentation, https://github.com/hiroalchem/napari-labelimg4classification#README.md', 'Source Code, https://github.com/hiroalchem/napari-labelimg4classification', 'User Support, https://github.com/hiroalchem/napari-labelimg4classification/issues']",,,napari-labelimg4classification.L4CWidget,,,,,https://pypi.org/project/napari-labelimg4classification,https://github.com/hiroalchem/napari-labelimg4classification, -204,napari Labeling,0.1.2,2022-07-07,2023-06-18,napari-labeling,Tom Burke,burke@mpi-cbg.de,BSD-3-Clause,https://github.com/Labelings/napari-labeling,A napari plugin for handling overlapping labeling data,>=3.7,"['numpy', 'labeling']","# napari-labeling +215,napari Labeling,0.1.2,2022-07-07,2023-06-18,napari-labeling,Tom Burke,burke@mpi-cbg.de,BSD-3-Clause,https://github.com/Labelings/napari-labeling,A napari plugin for handling overlapping labeling data,>=3.7,"['numpy', 'labeling']","# napari-labeling [![License](https://img.shields.io/pypi/l/napari-labeling.svg?color=green)](https://github.com/tomburke-rse/napari-labeling/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-labeling.svg?color=green)](https://pypi.org/project/napari-labeling) @@ -20729,7 +21698,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']",,napari-labeling.napari_get_reader,napari-labeling.write_single_image,napari-labeling.make_magic_widget,,['*.lbl.json'],,,https://pypi.org/project/napari-labeling,https://github.com/Labelings/napari-labeling, -205,napari-labelling-assistant,0.0.5,2022-01-28,2023-06-18,napari-labelling-assistant,Pranjal Dhole,dhole.pranjal@gmail.com,MIT,https://github.com/pranjaldhole/napari-labelling-assistant,A lightweight plugin for visualizing labelling statistics.,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'matplotlib']","# napari-labelling-assistant +216,napari-labelling-assistant,0.0.5,2022-01-28,2023-06-18,napari-labelling-assistant,Pranjal Dhole,dhole.pranjal@gmail.com,MIT,https://github.com/pranjaldhole/napari-labelling-assistant,A lightweight plugin for visualizing labelling statistics.,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'matplotlib']","# napari-labelling-assistant [![License](https://img.shields.io/pypi/l/napari-labelling-assistant.svg?color=green)](https://github.com/pranjaldhole/napari-labelling-assistant/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-labelling-assistant.svg?color=green)](https://pypi.org/project/napari-labelling-assistant) @@ -20799,7 +21768,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['Bug Tracker, https://github.com/pranjaldhole/napari-labelling-assistant/issues', 'Documentation, https://github.com/pranjaldhole/napari-labelling-assistant#README.md', 'Source Code, https://github.com/pranjaldhole/napari-labelling-assistant', 'User Support, https://github.com/pranjaldhole/napari-labelling-assistant/issues']",,,napari-labelling-assistant.LabellingAssistant,,,,,https://pypi.org/project/napari-labelling-assistant,https://github.com/pranjaldhole/napari-labelling-assistant, -206,napari Label Propagation,1.0.0,2023-11-18,2023-11-18,napari-labelprop,nathandecaux,nathan.decaux@imt-atlantique.fr,BSD-3-Clause,https://pypi.org/project/napari-labelprop,Label propagation through deep registration,>=3.8,"['deep-labelprop', 'napari-nifti', 'numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-labelprop +217,napari Label Propagation,1.0.0,2023-11-18,2023-11-18,napari-labelprop,nathandecaux,nathan.decaux@imt-atlantique.fr,BSD-3-Clause,https://pypi.org/project/napari-labelprop,Label propagation through deep registration,>=3.8,"['deep-labelprop', 'napari-nifti', 'numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-labelprop [![License](https://img.shields.io/pypi/l/napari-labelprop.svg?color=green)](https://github.com/nathandecaux/napari-labelprop/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-labelprop.svg?color=green)](https://pypi.org/project/napari-labelprop) @@ -20913,7 +21882,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']",,,,napari-labelprop.inference_widget,napari-labelprop.make_sample_data,,,,https://pypi.org/project/napari-labelprop,, -207,napari labels overlap,0.0.3,2022-02-11,2023-06-18,napari-labels-overlap,Chi-Li Chiu,cchiu@chanzuckerberg.com,BSD-3-Clause,https://github.com/chili-chiu/napari-labels-overlap,create an overlap labels layer from two labels layers,>=3.7,['scikit-image'],"# napari-labels-overlap +218,napari labels overlap,0.0.3,2022-02-11,2023-06-18,napari-labels-overlap,Chi-Li Chiu,cchiu@chanzuckerberg.com,BSD-3-Clause,https://github.com/chili-chiu/napari-labels-overlap,create an overlap labels layer from two labels layers,>=3.7,['scikit-image'],"# napari-labels-overlap [![License](https://img.shields.io/pypi/l/napari-labels-overlap.svg?color=green)](https://github.com/chili-chiu/napari-labels-overlap/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-labels-overlap.svg?color=green)](https://pypi.org/project/napari-labels-overlap) @@ -21010,7 +21979,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/chili-chiu/napari-labels-overlap/issues', 'Documentation, https://github.com/chili-chiu/napari-labels-overlap#README.md', 'Source Code, https://github.com/chili-chiu/napari-labels-overlap', 'User Support, https://github.com/chili-chiu/napari-labels-overlap/issues']",,,napari-labels-overlap.labels_overlap,,,,,https://pypi.org/project/napari-labels-overlap,https://github.com/chili-chiu/napari-labels-overlap, -208,NLII,0.0.2,2023-02-21,2023-06-18,napari-large-image-importer,Hiroki Kawai,h.kawai888@gmail.com,BSD-3-Clause,https://github.com/hiroalchem/napari-large-image-importer,"Napari plugin for easy, memory-efficient import of large images.",>=3.8,"['numpy', 'magicgui', 'qtpy', 'tifffile', 'zarr', 'dask', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-large-image-importer +219,NLII,0.0.2,2023-02-21,2023-06-18,napari-large-image-importer,Hiroki Kawai,h.kawai888@gmail.com,BSD-3-Clause,https://github.com/hiroalchem/napari-large-image-importer,"Napari plugin for easy, memory-efficient import of large images.",>=3.8,"['numpy', 'magicgui', 'qtpy', 'tifffile', 'zarr', 'dask', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-large-image-importer [![License BSD-3](https://img.shields.io/pypi/l/napari-large-image-importer.svg?color=green)](https://github.com/hiroalchem/napari-large-image-importer/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-large-image-importer.svg?color=green)](https://pypi.org/project/napari-large-image-importer) @@ -21078,105 +22047,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/hiroalchem/napari-large-image-importer/issues', 'Documentation, https://github.com/hiroalchem/napari-large-image-importer#README.md', 'Source Code, https://github.com/hiroalchem/napari-large-image-importer', 'User Support, https://github.com/hiroalchem/napari-large-image-importer/issues']",,,napari-large-image-importer.make_qwidget,,,,,https://pypi.org/project/napari-large-image-importer,https://github.com/hiroalchem/napari-large-image-importer, -209,Lattice Lightsheet Analysis,0.2.7,,,napari-lattice,"Pradeep Rajasekhar, Lachlan Whitehead,Robert Haase",bioimageanalysis@wehi.edu.au,GPL-3.0-only,,Napari plugin for analysing and visualizing lattice lightsheet and Oblique Plane Microscopy data.,>=3.8,"['aicsimageio (>=4.9.1)', 'aicspylibczi (>=3.0.5)', 'dask', 'dask-image', 'dask[distributed]', 'magic-class (>=0.6.13)', 'magicgui', 'napari[all]', 'pyopencl', 'read-roi', 'gputools', 'pyclesperanto-prototype (>=0.20.0)', 'napari-aicsimageio (>=0.7.2)', 'napari-spreadsheet', 'napari-workflows (>=0.2.8)', 'napari-workflow-inspector', 'npy2bdv', 'redlionfish', 'tifffile', 'fsspec (>=2022.8.2)', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'""]","# napari-lattice - -[![License](https://img.shields.io/pypi/l/napari-lattice.svg?color=green)](https://github.com/githubuser/napari_lattice/raw/main/LICENSE) -[![PyPI](https://img.shields.io/pypi/v/napari-lattice.svg?color=green)](https://pypi.org/project/napari_lattice) -[![Python Version](https://img.shields.io/pypi/pyversions/napari-lattice.svg?color=green)](https://python.org) -[![tests](https://github.com/BioimageAnalysisCoreWEHI/napari_lattice/actions/workflows/test_and_deploy.yml/badge.svg)](https://github.com/BioimageAnalysisCoreWEHI/napari_lattice/actions/workflows/test_and_deploy.yml) -[![PyPI - Downloads](https://img.shields.io/pypi/dm/napari-lattice)](https://pypistats.org/packages/napari-lattice) -[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-lattice)](https://napari-hub.org/plugins/napari-lattice) - -This napari plugin allows deskewing, cropping, visualisation and designing custom analysis pipelines for lattice lightsheet data, particularly from the Zeiss Lattice Lightsheet. The plugin has also been otpimixed to run in headless mode. - - -## **Documentation** - -Check the [Wiki page](https://github.com/BioimageAnalysisCoreWEHI/napari_lattice/wiki) for documentation on how to get started. - - -************* - - -

- -

- -**Functions** - -* Deskewing and deconvolution of Zeiss lattice lightsheet images - * Ability to preview deskewed image at channel or timepoint of interest -* Crop and process only a small portion of the image -* Import ImageJ ROIs for cropping -* Create image processing workflows using napari-workflows -* Run deskewing, deconvolution and custom image processing workflows from the terminal -* Files can be saved as h5 (BigDataViewer/BigStitcher) or tiff files -* Run in terminal without napari, enabling processing workflows on the HPC - -**Key Features** - -Apply custom image processing workflows using `napari-workflows`. -* [Interactive workflow generation (no coding experience needed)](https://github.com/BioimageAnalysisCoreWEHI/napari_lattice/wiki/5.-Workflows-(Interactive:-no-coding)#workflow) -* [Use custom python functions/modules within workflows](https://github.com/BioimageAnalysisCoreWEHI/napari_lattice/wiki/5.1-Workflows-(Custom-workflow)) -* [How to use Cellpose for cell segmentation](https://github.com/BioimageAnalysisCoreWEHI/napari_lattice/wiki/5.1-Workflows-(Custom-workflow)#cellpose) - - -Support will be added for more file formats in the future. - -Sample lattice lightsheet data download: https://doi.org/10.5281/zenodo.7117784 - ----------------------------------- - -This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template. - - - - -## Contributing - -Contributions are very welcome. Tests can be run with [tox], please ensure -the coverage at least stays the same before you submit a pull request. - -## License - -Distributed under the terms of the [GPL-3.0 License] license, -""napari_lattice"" is free and open source software - -## Acknowledgment - - This project was supported by funding from the [Rogers Lab at the Centre for Dynamic Imaging at the Walter and Eliza Hall Institute of Medical Research](https://imaging.wehi.edu.au/). This project has been made possible in part by [Napari plugin accelerator grant](https://chanzuckerberg.com/science/programs-resources/imaging/napari/lattice-light-sheet-data-analysis-toolset/) from the Chan Zuckerberg Initiative DAF, an advised fund of the Silicon Valley Community Foundation. - - Thanks to the developers and maintainers of the amazing open-source plugins such as [pyclesperanto](https://github.com/clEsperanto/pyclesperanto_prototype), [aicsimageio](https://github.com/AllenCellModeling/aicsimageio), [dask](https://github.com/dask/dask) and [pycudadecon](https://github.com/tlambert03/pycudadecon). - Thanks in particular to the developers of open source projects: [LLSpy](https://github.com/tlambert03/LLSpy) and [lls_dd](https://github.com/VolkerH/Lattice_Lightsheet_Deskew_Deconv) as they were referred to extensively for developing napari-lattice. - Thanks to the imagesc forum! - -## Issues - -If you encounter any problems, please [file an issue](https://github.com/BioimageAnalysisCoreWEHI/napari_lattice/issues) along with a detailed description. - -[napari]: https://github.com/napari/napari -[Cookiecutter]: https://github.com/audreyr/cookiecutter -[@napari]: https://github.com/napari -[MIT]: http://opensource.org/licenses/MIT -[BSD-3]: http://opensource.org/licenses/BSD-3-Clause -[GGPL-3.0 License]: http://www.gnu.org/licenses/gpl-3.0.txt -[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt -[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0 -[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt -[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin - -[napari]: https://github.com/napari/napari -[tox]: https://tox.readthedocs.io/en/latest/ -[pip]: https://pypi.org/project/pip/ -[PyPI]: https://pypi.org/ -","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']","['Bug Tracker, https://github.com/BioimageAnalysisCoreWEHI/napari_lattice/issues', 'Documentation, https://github.com/BioimageAnalysisCoreWEHI/napari_lattice/wiki', 'Source Code, https://github.com/BioimageAnalysisCoreWEHI/napari_lattice', 'User Support, https://github.com/BioimageAnalysisCoreWEHI/napari_lattice/issues']",napari-lattice.get_reader,,napari-lattice._dock_widget,,['*.h5'],,,https://pypi.org/project/napari-lattice,, -210,napari-layer-details-display,0.1.5,2022-02-04,2023-06-18,napari-layer-details-display,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,https://github.com/haesleinhuepf/napari-layer-details-display,A display for layer information and properties,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari-tools-menu']","# napari-layer-details-display +220,Lattice Lightsheet Analysis,1.0.0,,,napari-lattice,"Pradeep Rajasekhar, Lachlan Whitehead, Robert Haase, Michael Milton",,GPL-3.0-only,,Napari plugin for analysing and visualizing lattice lightsheet and Oblique Plane Microscopy data.,>=3.8,"['aicsimageio>=4.6.3', 'dask[distributed]', 'fsspec>=2022.8.2', 'importlib-resources', 'lls-core', 'magic-class<0.8.0,>=0.7.5', 'magicgui<0.8.0', 'napari-spreadsheet', 'napari-workflow-inspector', 'napari-workflows>=0.2.8', 'napari>=0.4.11', 'npy2bdv', 'numpy', 'psutil', 'pyclesperanto-prototype>=0.20.0', 'pydantic', 'qtpy', 'typing-extensions>=4.7.0', 'rich', 'StrEnum', 'xarray', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""']",,"['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']","['Repository, https://github.com/BioimageAnalysisCoreWEHI/napari_lattice', 'BugTracker, https://github.com/BioimageAnalysisCoreWEHI/napari_lattice/issues', 'Documentation, https://github.com/BioimageAnalysisCoreWEHI/napari_lattice/wiki', 'SourceCode, https://github.com/BioimageAnalysisCoreWEHI/napari_lattice', 'UserSupport, https://github.com/BioimageAnalysisCoreWEHI/napari_lattice/issues']",napari-lattice.get_reader,,napari-lattice.dock_widget,,['*.h5'],,,https://pypi.org/project/napari-lattice,, +221,napari-layer-details-display,0.1.5,2022-02-04,2023-06-18,napari-layer-details-display,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,https://github.com/haesleinhuepf/napari-layer-details-display,A display for layer information and properties,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari-tools-menu']","# napari-layer-details-display [![License](https://img.shields.io/pypi/l/napari-layer-details-display.svg?color=green)](https://github.com/haesleinhuepf/napari-layer-details-display/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-layer-details-display.svg?color=green)](https://pypi.org/project/napari-layer-details-display) @@ -21238,7 +22110,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/haesleinhuepf/napari-layer-details-display/issues', 'Documentation, https://github.com/haesleinhuepf/napari-layer-details-display#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-layer-details-display', 'User Support, https://github.com/haesleinhuepf/napari-layer-details-display/issues']",,,napari-layer-details-display.LayerDetailsDisplay,,,,,https://pypi.org/project/napari-layer-details-display,https://github.com/haesleinhuepf/napari-layer-details-display, -211,Layer Table,0.0.13,2022-07-07,2023-06-18,napari-layer-table,Robert Cudmore,rhcudmore@ucdavis.edu,GPL-3.0-only,https://github.com/mapmanager/napari-layer-table,A plugin to display a layer as a table.,>=3.9,['numpy'],"# napari-layer-table +222,Layer Table,0.0.13,2022-07-07,2023-06-18,napari-layer-table,Robert Cudmore,rhcudmore@ucdavis.edu,GPL-3.0-only,https://github.com/mapmanager/napari-layer-table,A plugin to display a layer as a table.,>=3.9,['numpy'],"# napari-layer-table [![License: GPL v3](https://img.shields.io/badge/License-GPLv3-blue.svg)](https://www.gnu.org/licenses/gpl-3.0) [![PyPI version](https://badge.fury.io/py/napari-layer-table.svg)](https://badge.fury.io/py/napari-layer-table) @@ -21342,7 +22214,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']","['Bug Tracker, https://github.com/mapmanager/napari-layer-table/issues', 'Documentation, https://github.com/mapmanager/napari-layer-table#README.md', 'Source Code, https://github.com/mapmanager/napari-layer-table', 'User Support, https://github.com/mapmanager/napari-layer-table/issues']",,,napari-layer-table.make_my_qwidget,,,,,https://pypi.org/project/napari-layer-table,https://github.com/mapmanager/napari-layer-table, -212,napari-lazy-openslide,0.3.0,2022-02-17,2023-06-18,napari-lazy-openslide,Trevor Manz,trevor.j.manz@gmail.com,BSD-3,https://github.com/manzt/napari-lazy-openslide,A plugin to lazily load multiscale whole-slide images with openslide and dask,>=3.6,"['napari-plugin-engine (>=0.1.4)', 'zarr (>=2.11.0)', 'numpy', 'dask[array]', 'openslide-python']","# napari-lazy-openslide +223,napari-lazy-openslide,0.3.0,2022-02-17,2023-06-18,napari-lazy-openslide,Trevor Manz,trevor.j.manz@gmail.com,BSD-3,https://github.com/manzt/napari-lazy-openslide,A plugin to lazily load multiscale whole-slide images with openslide and dask,>=3.6,"['napari-plugin-engine (>=0.1.4)', 'zarr (>=2.11.0)', 'numpy', 'dask[array]', 'openslide-python']","# napari-lazy-openslide [![License](https://img.shields.io/pypi/l/napari-lazy-openslide.svg?color=green)](https://github.com/manzt/napari-lazy-openslide/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-lazy-openslide.svg?color=green)](https://pypi.org/project/napari-lazy-openslide) @@ -21440,7 +22312,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [file an issue]: https://github.com/manzt/napari-lazy-openslide/issues [PyPI]: https://pypi.org/ ","['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License', 'Framework :: napari']",,napari-lazy-openslide.napari_get_reader,,,,['*'],,,https://pypi.org/project/napari-lazy-openslide,https://github.com/manzt/napari-lazy-openslide, -213,napari LF,0.1.6,2023-11-18,2023-11-18,napari-LF,"Geneva Schlafly, Amitabh Verma, Rudolf Oldenbourg","gschlafly@uchicago.edu, averma@mbl.edu, rudolfo@mbl.edu",BSD-3-Clause,https://pypi.org/project/napari-LF,Light field imaging plugin for napari,>=3.7,"['numpy', 'h5py', 'pyopencl', 'napari[all]', 'opencv-python', 'torch', 'torchvision', 'pytorch-lightning']","# napari-LF +224,napari LF,0.1.7,2023-11-18,2023-11-18,napari-LF,"Geneva Schlafly, Amitabh Verma, Rudolf Oldenbourg","gschlafly@uchicago.edu, averma@mbl.edu, rudolfo@mbl.edu",BSD-3-Clause,https://pypi.org/project/napari-LF,Light field imaging plugin for napari,>=3.7,"['numpy', 'h5py', 'pyopencl', 'napari[all]', 'opencv-python', 'torch', 'torchvision', 'pytorch-lightning']","# napari-LF [![License](https://img.shields.io/pypi/l/napari-LF.svg?color=green)](https://github.com/PolarizedLightFieldMicroscopy/napari-LF/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-LF.svg?color=green)](https://pypi.org/project/napari-LF) @@ -21539,7 +22411,7 @@ From the napari menu, select **Plugins > Main Menu (napari-LF)**. Note that you Create a virtual environment from the command line for napari with the python libraries necessary for the light field plugin: - conda create --name napari-lf python==3.9 + conda create -y -n napari-lf -c conda-forge python==3.9 conda activate napari-lf Clone the github repository: @@ -21549,6 +22421,10 @@ Clone the github repository: cd napari-LF pip install -e . +The necessary dependencies should be installed automatically with `napari-LF`. If for some reason `pyopencl` does not get installed properly, try installing with conda: + + conda install -c conda-forge pyopencl + ## Contributing Contributions are very welcome. Tests can be run with [tox], please ensure @@ -21581,7 +22457,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/PolarizedLightFieldMicroscopy/napari-LF/issues', 'Documentation, https://github.com/PolarizedLightFieldMicroscopy/napari-LF#README.md', 'Source Code, https://github.com/PolarizedLightFieldMicroscopy/napari-LF', 'User Support, https://github.com/PolarizedLightFieldMicroscopy/napari-LF/issues']",napari-LF.get_reader,napari-LF.write_multiple,napari-LF.make_lfqwidget,napari-LF.make_sample_data,['*.npy'],,['.npy'],https://pypi.org/project/napari-LF,, -214,Napari Listener,0.1.0b1.post1,,,napari-listener,Ashley Anderson,aandersoniii@chanzuckerberg.com,MIT,,Control napari via local socket.,>=3.8,"['napari', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-listener +225,Napari Listener,0.1.0b1.post1,,,napari-listener,Ashley Anderson,aandersoniii@chanzuckerberg.com,MIT,,Control napari via local socket.,>=3.8,"['napari', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-listener [![License MIT](https://img.shields.io/pypi/l/napari-listener.svg?color=green)](https://github.com/aganders3/napari-listener/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-listener.svg?color=green)](https://pypi.org/project/napari-listener) @@ -21652,7 +22528,7 @@ description. [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11']","['Bug Tracker, https://github.com/aganders3/napari-listener/issues', 'Documentation, https://github.com/aganders3/napari-listener#README.md', 'Source Code, https://github.com/aganders3/napari-listener', 'User Support, https://github.com/aganders3/napari-listener/issues']",,,napari-listener.start_listening,,,,,https://pypi.org/project/napari-listener,, -215,Napari Live Flim,0.1.1,,,napari-live-flim,Kevin Tan,kktangent@gmail.com,GPL-3.0-only,,A plugin for real-time FLIM analysis,>=3.8,"['dataclasses-json', 'flimlib', 'magicgui', 'matplotlib', 'numpy', 'qtpy', 'scipy', 'superqt', 'vispy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-live-flim +226,Napari Live Flim,0.1.1,,,napari-live-flim,Kevin Tan,kktangent@gmail.com,GPL-3.0-only,,A plugin for real-time FLIM analysis,>=3.8,"['dataclasses-json', 'flimlib', 'magicgui', 'matplotlib', 'numpy', 'qtpy', 'scipy', 'superqt', 'vispy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-live-flim [![License GNU GPL v3.0](https://img.shields.io/pypi/l/napari-live-flim.svg?color=green)](https://github.com/uw-loci/napari-live-flim/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-live-flim.svg?color=green)](https://pypi.org/project/napari-live-flim) @@ -21736,7 +22612,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']",,,,napari-live-flim.open,,,,,https://pypi.org/project/napari-live-flim,, -216,napari-live-recording,0.3.8,2022-02-02,2024-03-16,napari-live-recording,jacopo.abramo@gmail.com,jacopo.abramo@gmail.com,MIT,https://github.com/jethro33/napari-live-recording,A napari plugin for live video recording with a generic camera device.,>=3.9,"['superqt', 'numpy', 'opencv-python', 'tifffile', 'napari[all]', 'qtpy', 'microscope >=0.7.0', 'pims', 'pyqtgraph', 'pymmcore-plus >=0.6.7', 'pymmcore-widgets', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-live-recording +227,napari-live-recording,0.3.8,2022-02-02,2024-03-16,napari-live-recording,jacopo.abramo@gmail.com,jacopo.abramo@gmail.com,MIT,https://github.com/jethro33/napari-live-recording,A napari plugin for live video recording with a generic camera device.,>=3.9,"['superqt', 'numpy', 'opencv-python', 'tifffile', 'napari[all]', 'qtpy', 'microscope >=0.7.0', 'pims', 'pyqtgraph', 'pymmcore-plus >=0.6.7', 'pymmcore-widgets', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-live-recording [![License: MIT](https://img.shields.io/badge/License-MIT-green.svg)](https://github.com/jacopoabramo/napari-live-recording/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-live-recording.svg?color=green)](https://pypi.org/project/napari-live-recording) @@ -21836,7 +22712,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Intended Audience :: Science/Research', 'Intended Audience :: Education', 'Framework :: napari', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Visualization']","['Bug Tracker, https://github.com/jacopoabramo/napari-live-recording/issues', 'Documentation, https://github.com/jacopoabramo/napari-live-recording#README.md', 'Source Code, https://github.com/jacopoabramo/napari-live-recording', 'User Support, https://github.com/jacopoabramo/napari-live-recording/issues']",,,napari-live-recording.open,,,,,https://pypi.org/project/napari-live-recording,https://github.com/jethro33/napari-live-recording, -217,napari-locan,0.5.0,2023-11-10,2023-12-08,napari-locan,napari-locan Developers,,BSD 3-Clause,https://pypi.org/project/napari-locan,Use locan methods in napari for single-molecule localization microscopy data.,>=3.9,"['locan >=0.18', 'matplotlib', 'napari', 'napari-matplotlib', 'numpy', 'qtpy', ""black ; extra == 'dev'"", ""build ; extra == 'dev'"", ""coverage[toml] ; extra == 'dev'"", ""mypy ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""ruff ; extra == 'dev'"", ""twine ; extra == 'dev'"", ""furo ; extra == 'docs'"", ""ipython ; extra == 'docs'"", ""myst-nb ; extra == 'docs'"", ""napari >=0.4.17 ; extra == 'docs'"", ""sphinx ; extra == 'docs'"", ""sphinx-autodoc-typehints ; extra == 'docs'"", ""sphinx-copybutton ; extra == 'docs'"", ""pytest ; extra == 'test'"", ""pytest-qt ; extra == 'test'""]","![logo](./docs/_static/logo.png) napari-locan +228,napari-locan,0.5.0,2023-11-10,2023-12-08,napari-locan,napari-locan Developers,,BSD 3-Clause,https://pypi.org/project/napari-locan,Use locan methods in napari for single-molecule localization microscopy data.,>=3.9,"['locan >=0.18', 'matplotlib', 'napari', 'napari-matplotlib', 'numpy', 'qtpy', ""black ; extra == 'dev'"", ""build ; extra == 'dev'"", ""coverage[toml] ; extra == 'dev'"", ""mypy ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""ruff ; extra == 'dev'"", ""twine ; extra == 'dev'"", ""furo ; extra == 'docs'"", ""ipython ; extra == 'docs'"", ""myst-nb ; extra == 'docs'"", ""napari >=0.4.17 ; extra == 'docs'"", ""sphinx ; extra == 'docs'"", ""sphinx-autodoc-typehints ; extra == 'docs'"", ""sphinx-copybutton ; extra == 'docs'"", ""pytest ; extra == 'test'"", ""pytest-qt ; extra == 'test'""]","![logo](./docs/_static/logo.png) napari-locan ================================================== [![License](https://img.shields.io/github/license/super-resolution/napari-locan)](https://github.com/super-resolution/napari-locan/blob/main/LICENSE.md) @@ -21919,7 +22795,7 @@ This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookie [documentation on development]: https://napari-locan.readthedocs.io/en/latest/source/development.html [file an issue]: https://github.com/super-resolution/napari-locan/issues ","['Development Status :: 3 - Alpha', 'Environment :: X11 Applications :: Qt', 'Framework :: napari', 'Intended Audience :: Education', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: BSD License', 'Operating System :: MacOS', 'Operating System :: Microsoft :: Windows', 'Operating System :: POSIX', 'Operating System :: Unix', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Topic :: Scientific/Engineering :: Visualization']","['homepage, https://github.com/super-resolution/napari-locan', 'documentation, https://napari-locan.readthedocs.io/', 'issues, https://github.com/super-resolution/napari-locan/issues', 'discussions, https://github.com/super-resolution/napari-locan/discussions', 'changelog, https://github.com/super-resolution/napari-locan/CHANGES.rst', 'Source Code, https://github.com/super-resolution/napari-locan', 'Bug Tracker, https://github.com/super-resolution/napari-locan/issues', 'User Support, https://github.com/super-resolution/napari-locan/discussions']",,,napari-locan.smlm_data_qwidget,napari-locan.make_image_npc,,,,https://pypi.org/project/napari-locan,, -218,napari-locpix,0.0.6,2023-03-30,2023-06-18,napari-locpix,Oliver Umney,scou@leeds.ac.uk,MIT,https://github.com/oubino/napari-locpix,Load in SMLM data and annotate within napari,>=3.8,"['numpy', 'qtpy', 'polars', 'pyarrow', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-locpix +229,napari-locpix,0.0.6,2023-03-30,2023-06-18,napari-locpix,Oliver Umney,scou@leeds.ac.uk,MIT,https://github.com/oubino/napari-locpix,Load in SMLM data and annotate within napari,>=3.8,"['numpy', 'qtpy', 'polars', 'pyarrow', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-locpix [![License MIT](https://img.shields.io/pypi/l/napari-locpix.svg?color=green)](https://github.com/oubino/napari-locpix/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-locpix.svg?color=green)](https://pypi.org/project/napari-locpix) @@ -22033,7 +22909,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/oubino/napari-locpix/issues', 'Documentation, https://github.com/oubino/napari-locpix#README.md', 'Source Code, https://github.com/oubino/napari-locpix', 'User Support, https://github.com/oubino/napari-locpix/issues']",,,napari-locpix.widget,napari-locpix.make_sample_data,,,,https://pypi.org/project/napari-locpix,https://github.com/oubino/napari-locpix, -219,napari macro-kit,0.0.1,2023-03-30,2023-06-18,napari-macrokit,Hanjin Liu,liuhanjin-sc@g.ecc.u-tokyo.ac.jp,BSD-3-Clause,https://github.com/hanjinliu/napari-macrokit,Executable script generation for napari plugins,>=3.8,"['numpy', 'magicgui', 'qtpy', 'macro-kit (>=0.4.0)', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-macrokit +230,napari macro-kit,0.0.1,2023-03-30,2023-06-18,napari-macrokit,Hanjin Liu,liuhanjin-sc@g.ecc.u-tokyo.ac.jp,BSD-3-Clause,https://github.com/hanjinliu/napari-macrokit,Executable script generation for napari plugins,>=3.8,"['numpy', 'magicgui', 'qtpy', 'macro-kit (>=0.4.0)', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-macrokit [![License BSD-3](https://img.shields.io/pypi/l/napari-macrokit.svg?color=green)](https://github.com/hanjinliu/napari-macrokit/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-macrokit.svg?color=green)](https://pypi.org/project/napari-macrokit) @@ -22218,7 +23094,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/hanjinliu/napari-macrokit/issues', 'Documentation, https://github.com/hanjinliu/napari-macrokit#README.md', 'Source Code, https://github.com/hanjinliu/napari-macrokit', 'User Support, https://github.com/hanjinliu/napari-macrokit/issues']",,,napari-macrokit.make_qwidget,,,,,https://pypi.org/project/napari-macrokit,https://github.com/hanjinliu/napari-macrokit, -220,Manual registration,0.0.2,,,napari-manual-registration,"Alice Gros, Jules Vanaret",jules.vanaret@univ-amu.fr,BSD-3-Clause,,A simple plugin to register 2 views of the same object,>=3.8,"['numpy', 'scipy', 'magicgui', 'qtpy', 'pyclesperanto-prototype', 'scikit-image', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# :herb: napari-manual-registration +231,Manual registration,0.0.2,,,napari-manual-registration,"Alice Gros, Jules Vanaret",jules.vanaret@univ-amu.fr,BSD-3-Clause,,A simple plugin to register 2 views of the same object,>=3.8,"['numpy', 'scipy', 'magicgui', 'qtpy', 'pyclesperanto-prototype', 'scikit-image', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# :herb: napari-manual-registration [![License BSD-3](https://img.shields.io/pypi/l/napari-manual-registration.svg?color=green)](https://github.com/jules-vanaret/napari-manual-registration/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-manual-registration.svg?color=green)](https://pypi.org/project/napari-manual-registration) @@ -22361,7 +23237,7 @@ This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookie [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/jules-vanaret/napari-manual-registration/issues', 'Documentation, https://github.com/jules-vanaret/napari-manual-registration#README.md', 'Source Code, https://github.com/jules-vanaret/napari-manual-registration', 'User Support, https://github.com/jules-vanaret/napari-manual-registration/issues']",,,napari-manual-registration.run_registration,,,,,https://pypi.org/project/napari-manual-registration,, -221,Manual Transforms,0.0.3,2022-07-11,2023-06-18,napari-manual-transforms,Talley Lambert,talley.lambert@gmail.com,BSD-3-Clause,https://github.com/tlambert03/napari-manual-transforms,Interface to manually edit layer affine transforms,>=3.8,"['magicgui', 'napari', 'numpy', 'pytransform3d', 'qtpy', 'scipy', 'vispy', ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]","# napari-manual-transforms +232,Manual Transforms,0.0.3,2022-07-11,2023-06-18,napari-manual-transforms,Talley Lambert,talley.lambert@gmail.com,BSD-3-Clause,https://github.com/tlambert03/napari-manual-transforms,Interface to manually edit layer affine transforms,>=3.8,"['magicgui', 'napari', 'numpy', 'pytransform3d', 'qtpy', 'scipy', 'vispy', ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]","# napari-manual-transforms [![License](https://img.shields.io/pypi/l/napari-manual-transforms.svg?color=green)](https://github.com/tlambert03/napari-manual-transforms/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-manual-transforms.svg?color=green)](https://pypi.org/project/napari-manual-transforms) @@ -22444,7 +23320,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['Bug Tracker, https://github.com/tlambert03/napari-manual-transforms/issues', 'Documentation, https://github.com/tlambert03/napari-manual-transforms#README.md', 'Source Code, https://github.com/tlambert03/napari-manual-transforms', 'User Support, https://github.com/tlambert03/napari-manual-transforms/issues']",,,napari-manual-transforms.make_rotation_helper,,,,,https://pypi.org/project/napari-manual-transforms,https://github.com/tlambert03/napari-manual-transforms, -222,napari mat file reader,0.0.2,2023-04-11,2023-06-18,napari-mat-file-reader,Ruben Lopez,rjlopez2@gmail.com,BSD-3-Clause,https://github.com/rjlopez2/napari-mat-file-reader,This is a simple wraper to read .mat files from Matlab,>=3.8,"['numpy', 'mat73', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-mat-file-reader +233,napari mat file reader,0.0.2,2023-04-11,2023-06-18,napari-mat-file-reader,Ruben Lopez,rjlopez2@gmail.com,BSD-3-Clause,https://github.com/rjlopez2/napari-mat-file-reader,This is a simple wraper to read .mat files from Matlab,>=3.8,"['numpy', 'mat73', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-mat-file-reader [![License BSD-3](https://img.shields.io/pypi/l/napari-mat-file-reader.svg?color=green)](https://github.com/rjlopez2/napari-mat-file-reader/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-mat-file-reader.svg?color=green)](https://pypi.org/project/napari-mat-file-reader) @@ -22512,7 +23388,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/rjlopez2/napari-mat-file-reader/issues', 'Documentation, https://github.com/rjlopez2/napari-mat-file-reader#README.md', 'Source Code, https://github.com/rjlopez2/napari-mat-file-reader', 'User Support, https://github.com/rjlopez2/napari-mat-file-reader/issues']",napari-mat-file-reader.get_reader,,,napari-mat-file-reader.make_sample_data,['*.mat'],,,https://pypi.org/project/napari-mat-file-reader,https://github.com/rjlopez2/napari-mat-file-reader, -223,napari-mat-images,0.1.3,2022-02-04,2023-06-18,napari-mat-images,Hector Munoz,hectormz.git@gmail.com,BSD-3,https://github.com/hectormz/napari-mat-images,A plugin to load images stored in MATLAB .mat files with napari,>=3.6,"['dask[delayed]', 'h5py', 'numpy', 'pluggy', 'scipy']","# napari-mat-images +234,napari-mat-images,0.1.3,2022-02-04,2023-06-18,napari-mat-images,Hector Munoz,hectormz.git@gmail.com,BSD-3,https://github.com/hectormz/napari-mat-images,A plugin to load images stored in MATLAB .mat files with napari,>=3.6,"['dask[delayed]', 'h5py', 'numpy', 'pluggy', 'scipy']","# napari-mat-images [![PyPI version](https://img.shields.io/pypi/v/napari-mat-images.svg)](https://pypi.org/project/napari-mat-images) @@ -22579,7 +23455,7 @@ This [napari](https://github.com/napari/napari) plugin was generated with [Cooki ","['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.6', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: Implementation :: CPython', 'Programming Language :: Python :: Implementation :: PyPy', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']",,,,,,,,,https://pypi.org/project/napari-mat-images,https://github.com/hectormz/napari-mat-images, -224,napari math,0.0.1b0,2022-01-28,2023-06-18,napari-math,"Zach Marin, Talley Lambert",zach.marin@yale.edu,MIT,https://github.com/zacsimile/napari-math,"Simple mathematical operations on image, point and surface layers.",>=3.7,['numpy'],"# napari-math +235,napari math,0.0.1b0,2022-01-28,2023-06-18,napari-math,"Zach Marin, Talley Lambert",zach.marin@yale.edu,MIT,https://github.com/zacsimile/napari-math,"Simple mathematical operations on image, point and surface layers.",>=3.7,['numpy'],"# napari-math [![License](https://img.shields.io/pypi/l/napari-math.svg?color=green)](https://github.com/zacsimile/napari-math/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-math.svg?color=green)](https://pypi.org/project/napari-math) @@ -22650,7 +23526,7 @@ If you encounter any problems, please file an [issue] along with a detailed desc ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['Bug Tracker, https://github.com/zacsimile/napari-math/issues', 'Documentation, https://github.com/zacsimile/napari-math#README.md', 'Source Code, https://github.com/zacsimile/napari-math', 'User Support, https://github.com/zacsimile/napari-math/issues']",,,napari-math.math_widget,,,,,https://pypi.org/project/napari-math,https://github.com/zacsimile/napari-math, -225,napari Matplotlib,2.0.3,2022-06-08,2024-07-13,napari-matplotlib,David Stansby,d.stansby@ucl.ac.uk,BSD-3-Clause,https://github.com/matplotlib/napari-matplotlib,A plugin to use Matplotlib with napari,>=3.10,"['matplotlib', 'napari <0.5', 'numpy >=1.23', 'tinycss2', ""napari[all] ; extra == 'docs'"", ""numpydoc ; extra == 'docs'"", ""pydantic <2 ; extra == 'docs'"", ""pydata-sphinx-theme ; extra == 'docs'"", ""sphinx ; extra == 'docs'"", ""sphinx-automodapi ; extra == 'docs'"", ""sphinx-gallery ; extra == 'docs'"", ""napari[pyqt6_experimental] >=0.4.18 ; extra == 'testing'"", ""pooch ; extra == 'testing'"", ""pyqt6 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-mock ; extra == 'testing'"", ""pytest-mpl ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'"", 'pytest-xvfb ; (sys_platform == ""linux"") and extra == \'testing\'']","# napari-matplotlib +236,napari Matplotlib,3.0.0,2022-06-08,2024-10-08,napari-matplotlib,David Stansby,d.stansby@ucl.ac.uk,BSD-3-Clause,https://github.com/matplotlib/napari-matplotlib,A plugin to use Matplotlib with napari,>=3.10,"['matplotlib', 'napari >=0.5', 'numpy >=1.23', 'tinycss2', ""napari[all] ; extra == 'docs'"", ""numpydoc ; extra == 'docs'"", ""pydantic <2 ; extra == 'docs'"", ""pydata-sphinx-theme ; extra == 'docs'"", ""sphinx ; extra == 'docs'"", ""sphinx-automodapi ; extra == 'docs'"", ""sphinx-gallery ; extra == 'docs'"", ""napari[pyqt6_experimental] >=0.4.18 ; extra == 'testing'"", ""pooch ; extra == 'testing'"", ""pyqt6 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-mock ; extra == 'testing'"", ""pytest-mpl ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'"", 'pytest-xvfb ; (sys_platform == ""linux"") and extra == \'testing\'']","# napari-matplotlib [![License](https://img.shields.io/pypi/l/napari-matplotlib.svg?color=green)](https://github.com/matplotlib/napari-matplotlib/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-matplotlib.svg?color=green)](https://pypi.org/project/napari-matplotlib) @@ -22667,7 +23543,7 @@ A plugin to create Matplotlib plots from napari layers ## Introduction `napari-matplotlib` is a bridge between `napari` and `matplotlib`, making it easy to create publication quality `Matplotlib` plots based on the data loaded in `napari` layers. -Documentaiton can be found at https://napari-matplotlib.github.io/ +Documentation can be found at https://napari-matplotlib.github.io/ ## Contributing @@ -22693,7 +23569,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 5 - Production/Stable', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Topic :: Software Development :: Testing']","['Bug Tracker, https://github.com/matplotlib/napari-matplotlib/issues', 'Documentation, https://napari-matplotlib.github.io', 'Source Code, https://github.com/matplotlib/napari-matplotlib', 'User Support, https://github.com/matplotlib/napari-matplotlib/issues']",,,napari-matplotlib.histogram,,,,,https://pypi.org/project/napari-matplotlib,https://github.com/matplotlib/napari-matplotlib, -226,napari-mclabel,1.0.1.dev0,2023-08-02,2023-08-02,napari-mclabel,Jonas Utz,jonas.utz@fau.de,BSD-3-Clause,https://pypi.org/project/napari-mclabel,Napari plugin for semi-automatic labeling of macrophages,>=3.8,"['napari[all]', 'napari-plugin-engine (>=0.1.4)', 'imaris-ims-file-reader (>=0.1.5)', 'numpy', 'h5py', 'dask', 'napari-imaris-loader', 'scikit-image', 'scipy']","# Napari McLabel +237,napari-mclabel,1.0.1.dev0,2023-08-02,2023-08-02,napari-mclabel,Jonas Utz,jonas.utz@fau.de,BSD-3-Clause,https://pypi.org/project/napari-mclabel,Napari plugin for semi-automatic labeling of macrophages,>=3.8,"['napari[all]', 'napari-plugin-engine (>=0.1.4)', 'imaris-ims-file-reader (>=0.1.5)', 'numpy', 'h5py', 'dask', 'napari-imaris-loader', 'scikit-image', 'scipy']","# Napari McLabel ## What is the purpose of this tool? @@ -22761,7 +23637,7 @@ isbn=""978-3-658-41657-7"" ``` ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://gitlab.cs.fau.de/xo04syge/mclabel/-/issues', 'Documentation, https://gitlab.cs.fau.de/xo04syge/mclabel/-/blob/main/README.md', 'Source Code, https://gitlab.cs.fau.de/xo04syge/mclabel', 'User Support, https://gitlab.cs.fau.de/xo04syge/mclabel/-/issues']",,,napari-mclabel.McLabel,,,,,https://pypi.org/project/napari-mclabel,, -227,napari-medical-image-formats,0.3.8,2022-02-13,2023-06-18,napari-medical-image-formats,"Marc Boucsein, Marc Buckmakowski",,BSD-3,https://github.com/MBPhys/napari-medical-image-formats,A Plugin in order to read medical image formats such as DICOM and NIfTI,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'pydicom', 'SimpleITK', 'itk', 'itk-napari-conversion']","# napari-medical-image-formats +238,napari-medical-image-formats,0.3.8,2022-02-13,2023-06-18,napari-medical-image-formats,"Marc Boucsein, Marc Buckmakowski",,BSD-3,https://github.com/MBPhys/napari-medical-image-formats,A Plugin in order to read medical image formats such as DICOM and NIfTI,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'pydicom', 'SimpleITK', 'itk', 'itk-napari-conversion']","# napari-medical-image-formats [![License](https://img.shields.io/pypi/l/napari-medical-image-formats.svg?color=green)](https://github.com/MBPhys/napari-medical-image-formats/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-medical-image-formats.svg?color=green)](https://pypi.org/project/napari-medical-image-formats) @@ -22810,7 +23686,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']",,napari-medical-image-formats.napari_get_reader,napari-medical-image-formats.napari_write_image,,,['*'],,,https://pypi.org/project/napari-medical-image-formats,https://github.com/MBPhys/napari-medical-image-formats, -228,Melt Pool Tracker,0.1.2,2023-11-18,2023-11-18,napari-melt-pool-tracker,Florian Aymanns,florian.aymanns@epfl.ch,BSD-3-Clause,https://pypi.org/project/napari-melt-pool-tracker,Plugin for tracking the width and depth of the melt pool and keyhole in x-ray images of laser powder bed fusion experiments.,>=3.8,"['numpy', 'magicgui', 'qtpy', 'h5py', 'napari-cursor-tracker', 'napari', 'pandas', 'scikit-image', 'tifffile', 'scipy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]"," +239,Melt Pool Tracker,0.1.2,2023-11-18,2023-11-18,napari-melt-pool-tracker,Florian Aymanns,florian.aymanns@epfl.ch,BSD-3-Clause,https://pypi.org/project/napari-melt-pool-tracker,Plugin for tracking the width and depth of the melt pool and keyhole in x-ray images of laser powder bed fusion experiments.,>=3.8,"['numpy', 'magicgui', 'qtpy', 'h5py', 'napari-cursor-tracker', 'napari', 'pandas', 'scikit-image', 'tifffile', 'scipy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]"," # napari-melt-pool-tracker @@ -22938,7 +23814,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']",,napari-melt-pool-tracker.get_reader,napari-melt-pool-tracker.write_multiple,napari-melt-pool-tracker.make_qwidget,napari-melt-pool-tracker.make_sample_data,['*.h5'],,['.npy'],https://pypi.org/project/napari-melt-pool-tracker,, -229,StarDist OPP,0.1.1,2023-12-04,2023-12-04,napari-merge-stardist-masks,Niklas Netter,niknett@gmail.com,BSD-3-Clause,https://pypi.org/project/napari-merge-stardist-masks,Segment non-star-convex objects with StarDist by merging masks.,>=3.8,"['numpy', 'magicgui', 'qtpy', 'importlib-resources', 'stardist-napari >=2022.7.5', 'merge-stardist-masks >=0.1.0', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# StarDist OPP napari plugin +240,StarDist OPP,0.1.1,2023-12-04,2023-12-04,napari-merge-stardist-masks,Niklas Netter,niknett@gmail.com,BSD-3-Clause,https://pypi.org/project/napari-merge-stardist-masks,Segment non-star-convex objects with StarDist by merging masks.,>=3.8,"['numpy', 'magicgui', 'qtpy', 'importlib-resources', 'stardist-napari >=2022.7.5', 'merge-stardist-masks >=0.1.0', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# StarDist OPP napari plugin [![License BSD-3](https://img.shields.io/pypi/l/napari-merge-stardist-masks.svg?color=green)](https://github.com/gatoniel/napari-merge-stardist-masks/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-merge-stardist-masks.svg?color=green)](https://pypi.org/project/napari-merge-stardist-masks) @@ -23032,7 +23908,7 @@ This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookie [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/gatoniel/napari-merge-stardist-masks/issues', 'Documentation, https://github.com/gatoniel/napari-merge-stardist-masks#README.md', 'Source Code, https://github.com/gatoniel/napari-merge-stardist-masks', 'User Support, https://github.com/gatoniel/napari-merge-stardist-masks/issues']",,,napari-merge-stardist-masks.stardist_opp_widget,napari-merge-stardist-masks.stardist_opp_sample_data,,,,https://pypi.org/project/napari-merge-stardist-masks,, -230,meshio,0.0.1,2023-03-30,2023-06-18,napari-meshio,Genevieve Buckley,yourname@example.com,MIT,https://github.com/GenevieveBuckley/napari-meshio,I/O for mesh files.,>=3.8,"['numpy', 'meshio', 'pooch', 'rich', ""mkdocs ; extra == 'testing'"", ""mkdocs-gen-files ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-meshio +241,meshio,0.0.1,2023-03-30,2023-06-18,napari-meshio,Genevieve Buckley,yourname@example.com,MIT,https://github.com/GenevieveBuckley/napari-meshio,I/O for mesh files.,>=3.8,"['numpy', 'meshio', 'pooch', 'rich', ""mkdocs ; extra == 'testing'"", ""mkdocs-gen-files ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-meshio [![License MIT](https://img.shields.io/pypi/l/napari-meshio.svg?color=green)](https://github.com/GenevieveBuckley/napari-meshio/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-meshio.svg?color=green)](https://pypi.org/project/napari-meshio) @@ -23198,7 +24074,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template. ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/GenevieveBuckley/napari-meshio/issues', 'Documentation, https://github.com/GenevieveBuckley/napari-meshio#README.md', 'Source Code, https://github.com/GenevieveBuckley/napari-meshio', 'User Support, https://github.com/GenevieveBuckley/napari-meshio/issues']",napari-meshio.get_reader,napari-meshio.write_multiple,,napari-meshio.bunny,"['*.inp', '*.msh', '*.avs', '*.cgns', '*.xml', '*.e', '*.exo', '*.f3grid', '*.h5m', '*.mdpa', '*.mesh', '*.meshb', '*.med', '*.bdf', '*.fem', '*.nas', '*.vol', '*.vol.gz', '*.msh', '*.obj', '*.off', '*.post', '*.post.gz', '*.dato', '*.dato.gz', '*.ply', '*.stl', '*.dat', '*.node', '*.ele', '*.su2', '*.ugrid', '*.vtk', '*.vtu', '*.wkt', '*.xdmf', '*.xmf']",,"['.inp', '.msh', '.avs', '.cgns', '.xml', '.e', '.exo', '.f3grid', '.h5m', '.mdpa', '.mesh', '.meshb', '.med', '.bdf', '.fem', '.nas', '.vol', '.vol.gz', '.msh', '.obj', '.off', '.post', '.post.gz', '.dato', '.dato.gz', '.ply', '.stl', '.dat', '.node', '.ele', '.su2', '.ugrid', '.vtk', '.vtu', '.wkt', '.xdmf', '.xmf']",https://pypi.org/project/napari-meshio,https://github.com/GenevieveBuckley/napari-meshio, -231,MesoField,0.1.0,,,napari-mesofield,Jacob Gronemeyer,jgronemeyer@psu.edu," +242,MesoField,0.1.0,,,napari-mesofield,Jacob Gronemeyer,jgronemeyer@psu.edu," Mozilla Public License Version 2.0 ================================== @@ -23640,7 +24516,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Mozilla Public License 2.0 (MPL 2.0)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/Gronemeyer/napari-mesofield/issues', 'Documentation, https://github.com/Gronemeyer/napari-mesofield#README.md', 'Source Code, https://github.com/Gronemeyer/napari-mesofield', 'User Support, https://github.com/Gronemeyer/napari-mesofield/issues']",napari-mesofield.get_reader,napari-mesofield.write_multiple,napari-mesofield.make_container_widget,napari-mesofield.make_sample_data,['*.npy'],,['.npy'],https://pypi.org/project/napari-mesofield,, -232,napari METROID,0.0.5,2022-08-19,2023-06-18,napari-metroid,Marcelo Leomil Zoccoler,marcelo.zoccoler@tu-dresden.de,BSD-3-Clause,https://github.com/zoccoler/napari-metroid,This napari plugin creates several regions of interest of similar area over cells in a fluorescence video (2D+time). It then gets ROIs means over time and performs signal denoising: fixes photobleaching and separates signal from noise by means of blind source separation (with or without wavelet filtering).,"<3.9,>=3.7","['numpy', 'scikit-learn', 'scikit-image', 'statsmodels', 'scipy', 'matplotlib', 'napari-skimage-regionprops (>=0.3.1)']","# napari-metroid +243,napari METROID,0.0.5,2022-08-19,2023-06-18,napari-metroid,Marcelo Leomil Zoccoler,marcelo.zoccoler@tu-dresden.de,BSD-3-Clause,https://github.com/zoccoler/napari-metroid,This napari plugin creates several regions of interest of similar area over cells in a fluorescence video (2D+time). It then gets ROIs means over time and performs signal denoising: fixes photobleaching and separates signal from noise by means of blind source separation (with or without wavelet filtering).,"<3.9,>=3.7","['numpy', 'scikit-learn', 'scikit-image', 'statsmodels', 'scipy', 'matplotlib', 'napari-skimage-regionprops (>=0.3.1)']","# napari-metroid [![License](https://img.shields.io/pypi/l/napari-metroid.svg?color=green)](https://github.com/zoccoler/napari-metroid/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-metroid.svg?color=green)](https://pypi.org/project/napari-metroid) @@ -23817,7 +24693,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/zoccoler/napari-metroid/issues', 'Documentation, https://github.com/zoccoler/napari-metroid#README.md', 'Source Code, https://github.com/zoccoler/napari-metroid', 'User Support, https://github.com/zoccoler/napari-metroid/issues']",,napari-metroid.write_multiple,napari-metroid.make_qwidget,napari-metroid.make_cell1_AP1_data,,,['.npy'],https://pypi.org/project/napari-metroid,https://github.com/zoccoler/napari-metroid, -233,napari-micromanager,0.1.3,2022-02-14,2023-10-17,napari-micromanager,"Federico Gasparoli, Talley Lambert","Federico Gasparoli , Talley Lambert ",BSD 3-Clause,https://github.com/tlambert03/napari-micromanager,Micro-Manager GUI interface in napari.,>=3.9,"['fonticon-materialdesignicons6', 'napari>=0.4.13', 'pymmcore-plus>=0.9.3', 'pymmcore-widgets>=0.7.0rc1', 'superqt>=0.5.1', 'tifffile', 'useq-schema>=0.4.1', 'zarr', ""mda-simulator; extra == 'dev'"", ""mypy; extra == 'dev'"", ""pre-commit; extra == 'dev'"", ""ruff; extra == 'dev'"", ""mkdocs-material; extra == 'docs'"", ""mkdocstrings-python; extra == 'docs'"", ""pyqt5; extra == 'pyqt5'"", ""pyqt6; extra == 'pyqt6'"", ""pyside2; extra == 'pyside2'"", ""pyside6; extra == 'pyside6'"", ""pytest; extra == 'test'"", ""pytest-cov; extra == 'test'"", ""pytest-qt; extra == 'test'""]","# napari-micromanager +244,napari-micromanager,0.1.3,2022-02-14,2023-10-17,napari-micromanager,"Federico Gasparoli, Talley Lambert","Federico Gasparoli , Talley Lambert ",BSD 3-Clause,https://github.com/tlambert03/napari-micromanager,Micro-Manager GUI interface in napari.,>=3.9,"['fonticon-materialdesignicons6', 'napari>=0.4.13', 'pymmcore-plus>=0.9.3', 'pymmcore-widgets>=0.7.0rc1', 'superqt>=0.5.1', 'tifffile', 'useq-schema>=0.4.1', 'zarr', ""mda-simulator; extra == 'dev'"", ""mypy; extra == 'dev'"", ""pre-commit; extra == 'dev'"", ""ruff; extra == 'dev'"", ""mkdocs-material; extra == 'docs'"", ""mkdocstrings-python; extra == 'docs'"", ""pyqt5; extra == 'pyqt5'"", ""pyqt6; extra == 'pyqt6'"", ""pyside2; extra == 'pyside2'"", ""pyside6; extra == 'pyside6'"", ""pytest; extra == 'test'"", ""pytest-cov; extra == 'test'"", ""pytest-qt; extra == 'test'""]","# napari-micromanager [![License](https://img.shields.io/pypi/l/napari-micromanager.svg?color=green)](https://github.com/napari/napari-micromanager/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-micromanager.svg?color=green)](https://pypi.org/project/napari-micromanager) @@ -23896,7 +24772,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [file an issue]: https://github.com/pymmcore-plus/napari-micromanager/issues [pip]: https://pypi.org/project/pip/ ","['Development Status :: 3 - Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: System :: Hardware', 'Topic :: System :: Hardware :: Hardware Drivers', 'Topic :: Utilities']","['Source, https://github.com/pymmcore-plus/napari-micromanager', 'Tracker, https://github.com/pymmcore-plus/napari-micromanager/issues']",,,napari-micromanager.MainWindow,,,,,https://pypi.org/project/napari-micromanager,https://github.com/tlambert03/napari-micromanager, -234,napari-microscope,0.0.3,2022-02-23,2023-06-18,napari-microscope,David Miguel Susano Pinto,david.pinto@bioch.ox.ac.uk,GPL-3.0-or-later,https://pypi.org/project/napari-microscope/,Napari plugin for Microscope.,>=3.6,"['Pyro4', 'microscope', 'napari-plugin-engine']","Microscope control plugin for Napari via Python Microscope. +245,napari-microscope,0.0.3,2022-02-23,2023-06-18,napari-microscope,David Miguel Susano Pinto,david.pinto@bioch.ox.ac.uk,GPL-3.0-or-later,https://pypi.org/project/napari-microscope/,Napari plugin for Microscope.,>=3.6,"['Pyro4', 'microscope', 'napari_plugin_engine']","Microscope control plugin for Napari via Python Microscope. Current development stage is whatever comes before alpha and ""proof of concept"". @@ -23993,7 +24869,7 @@ returned. Changing the stage coordinates changes the image that is returned (but beware of the corners, pixels outside the image size are not handled yet and will give an error). ","['Development Status :: 3 - Alpha', 'Environment :: Plugins', 'Framework :: napari ', 'Intended Audience :: Science/Research', 'Operating System :: OS Independent', 'Topic :: Scientific/Engineering']",,,,napari-microscope.MicroscopeWidget,,,,,https://pypi.org/project/napari-microscope/,, -235,Microtubule Analyzer,0.0.1a7,2023-11-18,2023-11-22,napari-microtubule-analyzer,Daniel Krentzel,dkrentzel@pm.me,MIT,https://pypi.org/project/napari-microtubule-analyzer,A plugin to analyze microtubule organization,>=3.8,"['setuptools', 'packaging', 'numpy', 'magicgui', 'qtpy', 'opencv-python', 'matplotlib', 'scikit-image', 'tqdm', 'tifffile', 'scipy', 'pyefd', 'pyqtgraph', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# napari-microtubule-analyzer +246,Microtubule Analyzer,0.0.1a7,2023-11-18,2023-11-22,napari-microtubule-analyzer,Daniel Krentzel,dkrentzel@pm.me,MIT,https://pypi.org/project/napari-microtubule-analyzer,A plugin to analyze microtubule organization,>=3.8,"['setuptools', 'packaging', 'numpy', 'magicgui', 'qtpy', 'opencv-python', 'matplotlib', 'scikit-image', 'tqdm', 'tifffile', 'scipy', 'pyefd', 'pyqtgraph', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# napari-microtubule-analyzer [![License MIT](https://img.shields.io/pypi/l/napari-microtubule-analyzer.svg?color=green)](https://github.com/krentzd/napari-microtubule-analyzer/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-microtubule-analyzer.svg?color=green)](https://pypi.org/project/napari-microtubule-analyzer) @@ -24061,7 +24937,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/krentzd/napari-microtubule-analyzer/issues', 'Documentation, https://github.com/krentzd/napari-microtubule-analyzer#README.md', 'Source Code, https://github.com/krentzd/napari-microtubule-analyzer', 'User Support, https://github.com/krentzd/napari-microtubule-analyzer/issues']",napari-microtubule-analyzer.get_reader,,napari-microtubule-analyzer.degree_of_radiality,napari-microtubule-analyzer.sample_data,"['*.tif', '*.tiff']",,,https://pypi.org/project/napari-microtubule-analyzer,, -236,napari-mm3,0.0.16,,,napari-mm3,"Gursharan Ahir, Michael Sandler, Ryan Thiermann",ryan.thiermann@gmail.com,BSD-3-Clause,,a plugin for mother machine image analysis,>=3.9,"['napari-plugin-engine >=0.1.4', 'numpy', 'h5py', 'tifffile ==2021.11.2', 'scikit-learn', 'scikit-image', 'tensorflow', 'nd2reader', 'seaborn', 'elasticdeform']","# napari-mm3 +247,napari-mm3,0.0.16,,,napari-mm3,"Gursharan Ahir, Michael Sandler, Ryan Thiermann",ryan.thiermann@gmail.com,BSD-3-Clause,,a plugin for mother machine image analysis,>=3.9,"['napari-plugin-engine >=0.1.4', 'numpy', 'h5py', 'tifffile ==2021.11.2', 'scikit-learn', 'scikit-image', 'tensorflow', 'nd2reader', 'seaborn', 'elasticdeform']","# napari-mm3 [![License](https://img.shields.io/pypi/l/napari-mm3.svg?color=green)](https://github.com/junlabucsd/napari-mm3/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-mm3.svg?color=green)](https://pypi.org/project/napari-mm3) @@ -24214,7 +25090,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/junlabucsd/napari-mm3/issues', 'Documentation, https://github.com/junlabucsd/napari-mm3#README.md', 'Source Code, https://github.com/junlabucsd/napari-mm3', 'User Support, https://github.com/junlabucsd/napari-mm3/issues']",,,napari-mm3.TIFFConverter,,,,,https://pypi.org/project/napari-mm3,, -237,napari molecule reader,0.1.2,2022-01-31,2023-06-18,napari-molecule-reader,Lorenzo Gaifas,brisvag@gmail.com,BSD-3-Clause,https://github.com/brisvag/napari-molecule-reader,A napari plugin that read molecular structure files.,>=3.7,"['numpy', 'pandas', 'scipy', 'atomium']","# napari-molecule-reader +248,napari molecule reader,0.1.2,2022-01-31,2023-06-18,napari-molecule-reader,Lorenzo Gaifas,brisvag@gmail.com,BSD-3-Clause,https://github.com/brisvag/napari-molecule-reader,A napari plugin that read molecular structure files.,>=3.7,"['numpy', 'pandas', 'scipy', 'atomium']","# napari-molecule-reader [![License](https://img.shields.io/pypi/l/napari-molecule-reader.svg?color=green)](https://github.com/brisvag/napari-molecule-reader/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-molecule-reader.svg?color=green)](https://pypi.org/project/napari-molecule-reader) @@ -24289,7 +25165,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/brisvag/napari-molecule-reader/issues', 'Documentation, https://github.com/brisvag/napari-molecule-reader#README.md', 'Source Code, https://github.com/brisvag/napari-molecule-reader', 'User Support, https://github.com/brisvag/napari-molecule-reader/issues']",napari-molecule-reader.get_reader,,,,"['*.pdb', '*.cif']",,,https://pypi.org/project/napari-molecule-reader,https://github.com/brisvag/napari-molecule-reader, -238,molSEEQ,1.0.4,,,napari-molseeq,Piers Turner,piers.turner@physics.ox.ac.uk,MIT,,A Napari plugin for extracting single molecule sequences from single/multi-channel SMLM microscopy data.,>=3.9,"['napari[all] ==0.5.0', 'numpy', 'magicgui', 'qtpy', 'scipy', 'pyqtgraph', 'picassosr', 'pandas', 'matplotlib >=3.7.0', 'opencv-python', 'tqdm', 'originpro', 'pyqt5-tools', 'trackpy', 'shapely', 'astropy', 'mat4py', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-molSEEQ +249,molSEEQ,1.0.5,,,napari-molseeq,Piers Turner,piers.turner@physics.ox.ac.uk,MIT,,A Napari plugin for extracting single molecule sequences from single/multi-channel SMLM microscopy data.,>=3.9,"['napari[all]==0.5.0', 'numpy', 'magicgui', 'qtpy', 'scipy', 'pyqtgraph', 'picassosr==0.7.3', 'pandas', 'matplotlib>=3.7.0', 'opencv-python', 'tqdm', 'originpro', 'pyqt5-tools', 'trackpy', 'shapely', 'astropy', 'mat4py', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# napari-molSEEQ [![License MIT](https://img.shields.io/pypi/l/napari-GapSeq2.svg?color=green)](https://github.com/piedrro/napari-molseeq/blob/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-GapSeq2.svg?color=green)](https://pypi.org/project/napari-molseeq/) @@ -24307,8 +25183,6 @@ napari-molseeq traces can be analysed with TraceAnalyser: https://github.com/pie This is still undergoing development, so some features may not work as expected. -Formally known as **napari-pixseq**. - This was built by Dr Piers Turner from the Kapanidis Lab, University of Oxford. ---------------------------------- @@ -24360,7 +25234,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/piedrro/napari-molseeq/issues', 'Documentation, https://github.com/piedrro/napari-molseeq#README.md', 'Source Code, https://github.com/piedrro/napari-molseeq', 'User Support, https://github.com/piedrro/napari-molseeq/issues']",,,napari-molseeq.make_qwidget,,,,,https://pypi.org/project/napari-molseeq,, -239,MolTrack,0.1.4,,,napari-moltrack,Piers Turner,piers.turner@physics.ox.ac.uk," +250,MolTrack,0.1.6,,,napari-moltrack,Piers Turner,piers.turner@physics.ox.ac.uk," Copyright (c) 2024, Piers Turner All rights reserved. @@ -24388,7 +25262,7 @@ SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. -",,"A user-friendly SMLM analysis platfrom for napari, which includes single molecule localisation, tracking, and analysis features.",>=3.9,"['napari[all]==0.5.0', 'bactfit>=0.1.6', 'numpy', 'magicgui', 'qtpy', 'scipy', 'pyqtgraph', 'picassosr', 'pandas', 'matplotlib>=3.7.0', 'opencv-python', 'tqdm', 'originpro', 'pyqt5-tools', 'torch', 'cellpose>=3.0.1', 'omnipose', 'trackpy', 'shapely', 'astropy', 'mat4py', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# napari-moltrack +",,"A user-friendly SMLM analysis platfrom for napari, which includes single molecule localisation, tracking, and analysis features.",>=3.9,"['napari[all]==0.5.0', 'bactfit>=0.1.6', 'numpy', 'magicgui', 'qtpy', 'scipy', 'pyqtgraph', 'picassosr==0.7.3', 'pandas', 'matplotlib>=3.7.0', 'opencv-python', 'tqdm', 'originpro', 'pyqt5-tools', 'torch', 'torchvision', 'cellpose==3.0.1', 'omnipose', 'trackpy', 'shapely', 'astropy', 'mat4py', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# napari-moltrack [![License BSD-3](https://img.shields.io/pypi/l/napari-moltrack.svg?color=green)](https://github.com/piedrro/napari-moltrack/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-moltrack.svg?color=green)](https://pypi.org/project/napari-moltrack) @@ -24488,7 +25362,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/piedrro/napari-moltrack/issues', 'Documentation, https://github.com/piedrro/napari-moltrack#README.md', 'Source Code, https://github.com/piedrro/napari-moltrack', 'User Support, https://github.com/piedrro/napari-moltrack/issues']",,,napari-moltrack.make_qwidget,,,,,https://pypi.org/project/napari-moltrack,, -240,napari-morphodynamics,0.1.2,2023-12-09,2023-12-09,napari-morphodynamics,Guillaume Witz,guillaume.witz@unibe.ch,BSD-3-Clause,https://pypi.org/project/napari-morphodynamics,Interface to run the morphodynamics package.,>=3.9,"['morphodynamics', 'napari-convpaint', 'napari-guitils', 'napari-matplotlib', ""cellpose ; extra == 'cellpose'""]","# napari-morphodynamics +251,napari-morphodynamics,0.1.2,2023-12-09,2023-12-09,napari-morphodynamics,Guillaume Witz,guillaume.witz@unibe.ch,BSD-3-Clause,https://pypi.org/project/napari-morphodynamics,Interface to run the morphodynamics package.,>=3.9,"['morphodynamics', 'napari-convpaint', 'napari-guitils', 'napari-matplotlib', ""cellpose ; extra == 'cellpose'""]","# napari-morphodynamics [![License](https://img.shields.io/pypi/l/napari-morphodynamics.svg?color=green)](https://github.com/guiwitz/napari-morphodynamics/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-morphodynamics.svg?color=green)](https://pypi.org/project/napari-morphodynamics) @@ -24545,7 +25419,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/guiwitz/napari-morphodynamics/issues', 'Documentation, https://github.com/guiwitz/napari-morphodynamics#README.md', 'Source Code, https://github.com/guiwitz/napari-morphodynamics', 'User Support, https://github.com/guiwitz/napari-morphodynamics/issues']",,,napari-morphodynamics.make_qwidget,,,,,https://pypi.org/project/napari-morphodynamics,, -241,napari-mouse-controls,0.1.3,2022-02-04,2023-06-18,napari-mouse-controls,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,https://github.com/haesleinhuepf/napari-mouse-controls,Control napari using a touch screen,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari', 'napari-tools-menu']","# napari-mouse-controls +252,napari-mouse-controls,0.1.3,2022-02-04,2023-06-18,napari-mouse-controls,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,https://github.com/haesleinhuepf/napari-mouse-controls,Control napari using a touch screen,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari', 'napari-tools-menu']","# napari-mouse-controls [![License](https://img.shields.io/pypi/l/napari-mouse-controls.svg?color=green)](https://github.com/haesleinhuepf/napari-mouse-controls/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-mouse-controls.svg?color=green)](https://pypi.org/project/napari-mouse-controls) @@ -24636,7 +25510,7 @@ If you encounter any problems, please create a thread on [image.sc] along with a ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/haesleinhuepf/napari-mouse-control/issues', 'Documentation, https://github.com/haesleinhuepf/napari-mouse-controls#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-mouse-controls', 'User Support, https://github.com/haesleinhuepf/napari-mouse-controls/issues']",,,napari-mouse-controls.MouseControls,,,,,https://pypi.org/project/napari-mouse-controls,https://github.com/haesleinhuepf/napari-mouse-controls, -242,napari-mrcfile-handler,0.0.6,2022-02-11,2023-06-18,napari-mrcfile-handler,Philipp Schoennenbeck,p.schoennenbeck@fz-juelich.de,BSD-3-Clause,https://github.com/Croxa/napari-mrcfile_handler,"A simple plugin to read, write and adjust mrcfiles in napari.",>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'mrcfile']","# napari-mrcfile_handler +253,napari-mrcfile-handler,0.0.6,2022-02-11,2023-06-18,napari-mrcfile-handler,Philipp Schoennenbeck,p.schoennenbeck@fz-juelich.de,BSD-3-Clause,https://github.com/Croxa/napari-mrcfile_handler,"A simple plugin to read, write and adjust mrcfiles in napari.",>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'mrcfile']","# napari-mrcfile_handler [![License](https://img.shields.io/pypi/l/napari-mrcfile_handler.svg?color=green)](https://github.com/Croxa/napari-mrcfile_handler/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-mrcfile_handler.svg?color=green)](https://pypi.org/project/napari-mrcfile_handler) @@ -24696,7 +25570,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/Croxa/napari-mrcfile_handler/issues', 'Documentation, https://github.com/Croxa/napari-mrcfile_handler#README.md', 'Source Code, https://github.com/Croxa/napari-mrcfile_handler', 'User Support, https://github.com/Croxa/napari-mrcfile_handler/issues']",napari-mrcfile-handler.napari_get_reader,napari-mrcfile-handler.napari_write_image,napari-mrcfile-handler.PixelSpacing,,['*'],,,https://pypi.org/project/napari-mrcfile-handler,https://github.com/Croxa/napari-mrcfile_handler, -243,napari-mrcfile-reader,0.2.0,2022-01-31,2023-07-26,napari-mrcfile-reader,Alister Burt,alisterburt@gmail.com,BSD-3-Clause,https://github.com/alisterburt/napari-mrcfile-reader,Read MRC2014 files in napari using mrcfile.,>=3.8,"['numpy', 'mrcfile', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-mrcfile-reader +254,napari-mrcfile-reader,0.2.0,2022-01-31,2023-07-26,napari-mrcfile-reader,Alister Burt,alisterburt@gmail.com,BSD-3-Clause,https://github.com/alisterburt/napari-mrcfile-reader,Read MRC2014 files in napari using mrcfile.,>=3.8,"['numpy', 'mrcfile', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-mrcfile-reader [![License](https://img.shields.io/pypi/l/napari-mrcfile-reader.svg?color=green)](https://github.com/alisterburt/napari-mrcfile-reader/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-mrcfile-reader.svg?color=green)](https://pypi.org/project/napari-mrcfile-reader) @@ -24752,7 +25626,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/alisterburt/napari-mrcfile-reader/issues', 'Documentation, https://github.com/alisterburt/napari-mrcfile-reader#README.md', 'Source Code, https://github.com/alisterburt/napari-mrcfile-reader', 'User Support, https://github.com/alisterburt/napari-mrcfile-reader/issues']",napari-mrcfile-reader.get_reader,,,,"['*.mrc', '*.mrcs', '*.map', '*.st', '*.rec', '*.preali', '*.ali']",,,https://pypi.org/project/napari-mrcfile-reader,https://github.com/alisterburt/napari-mrcfile-reader, -244,napari-multitask,0.0.2,2022-02-24,2023-06-18,napari-multitask,Hanjin Liu,liuhanjin-sc@g.ecc.u-tokyo.ac.jp,BSD 3-Clause,https://pypi.org/project/napari-multitask/,Multitasking in napari,>=3.8,['magic-class (>=0.5.11)'],"# napari-multitask +255,napari-multitask,0.0.2,2022-02-24,2023-06-18,napari-multitask,Hanjin Liu,liuhanjin-sc@g.ecc.u-tokyo.ac.jp,BSD 3-Clause,https://pypi.org/project/napari-multitask/,Multitasking in napari,>=3.8,['magic-class (>=0.5.11)'],"# napari-multitask Multitasking on napari. @@ -24768,7 +25642,7 @@ pip install napari-multitask ","['Framework :: napari', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9']",,,,napari-multitask.TaskView,,,,,https://pypi.org/project/napari-multitask/,, -245,Napari Mzarr,0.0.3,2023-10-23,2023-10-23,napari-mzarr,Karol Gotkowski,karol.gotkowski@dkfz.de,Apache-2.0,https://pypi.org/project/napari-mzarr,A reader and writer plugin for the Mzarr image format.,>=3.8,"['numpy', 'zarr', 'numcodecs', 'imagecodecs ==2023.1.23', 'dask', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-mzarr +256,Napari Mzarr,0.0.3,2023-10-23,2023-10-23,napari-mzarr,Karol Gotkowski,karol.gotkowski@dkfz.de,Apache-2.0,https://pypi.org/project/napari-mzarr,A reader and writer plugin for the Mzarr image format.,>=3.8,"['numpy', 'zarr', 'numcodecs', 'imagecodecs ==2023.1.23', 'dask', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-mzarr [![License Apache Software License 2.0](https://img.shields.io/pypi/l/napari-mzarr.svg?color=green)](https://github.com/Karol-G/napari-mzarr/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-mzarr.svg?color=green)](https://pypi.org/project/napari-mzarr) @@ -24830,7 +25704,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']",,napari-mzarr.get_reader,napari-mzarr.write_multiple,,,"['*.mzarr', '*.mzz']",,['.mzarr'],https://pypi.org/project/napari-mzarr,, -246,napari n2v,0.1.1,2022-12-30,2023-09-06,napari-n2v,"Tom Burke, Joran Deschamps",joran.deschamps@fht.org,BSD-3-Clause,https://github.com/juglab/napari-n2v,A self-supervised denoising algorithm now usable by all in napari.,>=3.8,"['scikit-image', 'bioimageio.core', 'n2v >=0.3.2', 'napari-time-slicer >=0.4.9', 'napari', 'qtpy', 'pyqtgraph', 'tensorflow >=2.10.0 ; platform_system != ""Darwin"" or platform_machine != ""arm64""', 'tensorflow-macos ; platform_system == ""Darwin"" and platform_machine == ""arm64""', 'tensorflow-metal ; platform_system == ""Darwin"" and platform_machine == ""arm64""', 'numpy <1.24.0 ; python_version < ""3.9""', 'numpy ; python_version >= ""3.9""', ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-n2v +257,napari n2v,0.1.1,2022-12-30,2023-09-06,napari-n2v,"Tom Burke, Joran Deschamps",joran.deschamps@fht.org,BSD-3-Clause,https://github.com/juglab/napari-n2v,A self-supervised denoising algorithm now usable by all in napari.,>=3.8,"['scikit-image', 'bioimageio.core', 'n2v >=0.3.2', 'napari-time-slicer >=0.4.9', 'napari', 'qtpy', 'pyqtgraph', 'tensorflow >=2.10.0 ; platform_system != ""Darwin"" or platform_machine != ""arm64""', 'tensorflow-macos ; platform_system == ""Darwin"" and platform_machine == ""arm64""', 'tensorflow-metal ; platform_system == ""Darwin"" and platform_machine == ""arm64""', 'numpy <1.24.0 ; python_version < ""3.9""', 'numpy ; python_version >= ""3.9""', ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-n2v [![License](https://img.shields.io/pypi/l/napari-n2v.svg?color=green)](https://github.com/juglab/napari-n2v/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-n2v.svg?color=green)](https://pypi.org/project/napari-n2v) @@ -24918,7 +25792,7 @@ Distributed under the terms of the [BSD-3] license, [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Framework :: napari', 'Development Status :: 4 - Beta', 'Intended Audience :: Science/Research', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/juglab/napari-n2v/issues', 'Documentation, https://juglab.github.io/napari-n2v/', 'Source Code, https://github.com/juglab/napari-n2v', 'User Support, https://github.com/juglab/napari-n2v/issues']",,,napari-n2v.make_n2v_trainwidget,napari-n2v.data_2D,,,,https://pypi.org/project/napari-n2v,https://github.com/juglab/napari-n2v, -247,napari NanoPyx,0.1.5,,,napari-nanopyx,"Ricardo Henriques, Bruno Saraiva, Inês Cunha, António Brito",bruno.msaraiva2@gmail.com,LGPL-3.0-only,,"napari plugin of Nanoscopy Python library (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging",>=3.9,"['napari', 'nanopyx >=0.3.1', 'scikit-image', 'magicgui', ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-nanopyx +258,napari NanoPyx,0.1.5,,,napari-nanopyx,"Ricardo Henriques, Bruno Saraiva, Inês Cunha, António Brito",bruno.msaraiva2@gmail.com,LGPL-3.0-only,,"napari plugin of Nanoscopy Python library (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging",>=3.9,"['napari', 'nanopyx >=0.3.1', 'scikit-image', 'magicgui', ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-nanopyx @@ -24998,7 +25872,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc If you found this work useful, please cite: [preprint](https://www.biorxiv.org/content/10.1101/2023.08.13.553080v1) and [![DOI](https://zenodo.org/badge/505388398.svg)](https://zenodo.org/badge/latestdoi/505388398) ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU Lesser General Public License v3 (LGPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Topic :: Software Development :: Testing']","['Bug Tracker, https://github.com/HenriquesLab/napari-NanoPyx/issues', 'Documentation, https://github.com/HenriquesLab/napari-NanoPyx/wiki', 'Source Code, https://github.com/HenriquesLab/napari-NanoPyx', 'User Support, https://github.com/HenriquesLab/napari-NanoPyx/issues']",,,napari-nanopyx.benchmark,,,,,https://pypi.org/project/napari-nanopyx,, -248,Napari Napari,0.0.1,2023-08-01,2023-08-01,napari-napari,Jordao Bragantini,jordao.bragantini@gmail.com,BSD-3-Clause,https://github.com/jookuma/napari-napari,A napari viewer of the napari viewer,>=3.8,"['numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# [napari-napari](https://github.com/jookuma/napari-napari) +259,Napari Napari,0.0.1,2023-08-01,2023-08-01,napari-napari,Jordao Bragantini,jordao.bragantini@gmail.com,BSD-3-Clause,https://github.com/jookuma/napari-napari,A napari viewer of the napari viewer,>=3.8,"['numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# [napari-napari](https://github.com/jookuma/napari-napari) [![License BSD-3](https://img.shields.io/pypi/l/napari-napari.svg?color=green)](https://github.com/jookuma/napari-napari/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-napari.svg?color=green)](https://pypi.org/project/napari-napari) @@ -25068,7 +25942,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/jookuma/napari-napari/issues', 'Documentation, https://github.com/jookuma/napari-napari#README.md', 'Source Code, https://github.com/jookuma/napari-napari', 'User Support, https://github.com/jookuma/napari-napari/issues']",,,napari-napari.napari,,,,,https://pypi.org/project/napari-napari,https://github.com/jookuma/napari-napari, -249,NASA sample images,0.0.5,2022-08-18,2023-06-18,napari-nasa-samples,Loic A. Royer,royerloic@gmail.com,MPL-2.0,https://github.com/royerloic/napari-nasa-samples,This napari plugin provides sample datasets from NASA.,>=3.8,"['numpy', 'requests', 'pillow', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-nasa-samples +260,NASA sample images,0.0.5,2022-08-18,2023-06-18,napari-nasa-samples,Loic A. Royer,royerloic@gmail.com,MPL-2.0,https://github.com/royerloic/napari-nasa-samples,This napari plugin provides sample datasets from NASA.,>=3.8,"['numpy', 'requests', 'pillow', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-nasa-samples [![License Mozilla Public License 2.0](https://img.shields.io/pypi/l/napari-nasa-samples.svg?color=green)](https://github.com/royerlab/napari-nasa-samples/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-nasa-samples.svg?color=green)](https://pypi.org/project/napari-nasa-samples) @@ -25143,7 +26017,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Mozilla Public License 2.0 (MPL 2.0)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/royerloic/napari-nasa-samples/issues', 'Documentation, https://github.com/royerloic/napari-nasa-samples#README.md', 'Source Code, https://github.com/royerloic/napari-nasa-samples', 'User Support, https://github.com/royerloic/napari-nasa-samples/issues']",,,,napari-nasa-samples.messier_101,,,,https://pypi.org/project/napari-nasa-samples,https://github.com/royerloic/napari-nasa-samples, -250,Annotation Toolbox,0.2.3,2022-07-11,2023-06-18,napari-nD-annotator,"David Bauer, Jozsef Molnar, Dominik Hirling",dbauer@brc.hu,BSD-3-Clause,https://github.com/bauerdavid/napari-nD-annotator,A toolbox for annotating objects one by one in nD,>=3.8,"['numpy', 'magicgui', 'qtpy', 'opencv-python', 'matplotlib', 'napari >=0.4.11', 'scikit-image >=0.19', 'SimpleITK', ""napari-bbox ; extra == 'all'"", ""minimal-surface ; extra == 'all'"", ""napari-bbox ; extra == 'bbox'"", ""minimal-surface ; extra == 'ms'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""numpy ; extra == 'testing'""]","# napari-nD-annotator +261,Annotation Toolbox,0.2.3,2022-07-11,2024-12-03,napari-nD-annotator,"David Bauer, Jozsef Molnar, Dominik Hirling",dbauer@brc.hu,BSD-3-Clause,https://github.com/bauerdavid/napari-nD-annotator,A toolbox for annotating objects one by one in nD,>=3.8,"['numpy', 'magicgui', 'qtpy', 'opencv-python', 'matplotlib', 'napari >=0.4.11', 'scikit-image >=0.19', 'SimpleITK', ""napari-bbox ; extra == 'all'"", ""minimal-surface ; extra == 'all'"", ""napari-bbox ; extra == 'bbox'"", ""minimal-surface ; extra == 'ms'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""numpy ; extra == 'testing'""]","# napari-nD-annotator [![License BSD-3](https://img.shields.io/pypi/l/napari-nD-annotator.svg?color=green)](https://github.com/bauerdavid/napari-nD-annotator/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-nD-annotator.svg?color=green)](https://pypi.org/project/napari-nD-annotator) @@ -25342,7 +26216,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [napari-bbox]: https://github.com/bauerdavid/napari-bbox [minimal-surface]: https://pypi.org/project/minimal-surface ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: C', 'Programming Language :: Cython', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Programming Language :: Python :: Implementation :: CPython', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/bauerdavid/napari-nD-annotator/issues', 'Documentation, https://github.com/bauerdavid/napari-nD-annotator/blob/main/README.md', 'Source Code, https://github.com/bauerdavid/napari-nD-annotator', 'User Support, https://github.com/bauerdavid/napari-nD-annotator/issues']",,,napari-nD-annotator.annotator_widget,,,,,https://pypi.org/project/napari-nD-annotator,https://github.com/bauerdavid/napari-nD-annotator, -251,napari-nd-cropper,0.1.3,2022-03-06,2023-06-18,napari-nd-cropper,"Marc Boucsein, Robin Koch",,BSD-3-Clause,https://github.com/MBPhys/napari-nd-cropper,A napari plugin in order to crop nd-images via different modes,>=3.9,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari-tools-menu', 'qtpy', 'superqt', 'magicgui']","# napari-nd-cropper +262,napari-nd-cropper,0.1.3,2022-03-06,2023-06-18,napari-nd-cropper,"Marc Boucsein, Robin Koch",,BSD-3-Clause,https://github.com/MBPhys/napari-nd-cropper,A napari plugin in order to crop nd-images via different modes,>=3.9,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari-tools-menu', 'qtpy', 'superqt', 'magicgui']","# napari-nd-cropper [![License](https://img.shields.io/pypi/l/napari-medical-image-formats.svg?color=green)](https://github.com/MBPhys/napari-nd-cropper/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-nd-cropper.svg?color=green)](https://pypi.org/project/napari-nd-cropper) @@ -25397,7 +26271,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 3 - Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/MBPhys/napari-nd-cropper/issues', 'Documentation, https://github.com/MBPhys/napari-nd-cropper', 'Source Code, https://github.com/MBPhys/napari-nd-cropper', 'User Support, https://github.com/MBPhys/napari-nd-cropper/issues']",,,napari-nd-cropper.nd_Cropper,,,,,https://pypi.org/project/napari-nd-cropper,https://github.com/MBPhys/napari-nd-cropper, -252,napari nd2 folder viewer,0.0.13,2022-08-18,2023-06-18,napari-nd2-folder-viewer,Niklas Netter,niknett@gmail.com,BSD-3-Clause,https://github.com/gatoniel/napari-nd2-folder-viewer,Look through separate nd2 files in one viewer.,>=3.8,"['numpy', 'magicgui', 'qtpy', 'pyyaml', 'marshmallow', 'desert', 'nd2 (>=0.4.3)', 'dask', 'pandas', 'openpyxl', 'julian', 'napari-animation', 'scikit-learn', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-nd2-folder-viewer +263,napari nd2 folder viewer,0.0.13,2022-08-18,2023-06-18,napari-nd2-folder-viewer,Niklas Netter,niknett@gmail.com,BSD-3-Clause,https://github.com/gatoniel/napari-nd2-folder-viewer,Look through separate nd2 files in one viewer.,>=3.8,"['numpy', 'magicgui', 'qtpy', 'pyyaml', 'marshmallow', 'desert', 'nd2 (>=0.4.3)', 'dask', 'pandas', 'openpyxl', 'julian', 'napari-animation', 'scikit-learn', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-nd2-folder-viewer [![License BSD-3](https://img.shields.io/pypi/l/napari-nd2-folder-viewer.svg?color=green)](https://github.com/gatoniel/napari-nd2-folder-viewer/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-nd2-folder-viewer.svg?color=green)](https://pypi.org/project/napari-nd2-folder-viewer) @@ -25465,7 +26339,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/gatoniel/napari-nd2-folder-viewer/issues', 'Documentation, https://github.com/gatoniel/napari-nd2-folder-viewer#README.md', 'Source Code, https://github.com/gatoniel/napari-nd2-folder-viewer', 'User Support, https://github.com/gatoniel/napari-nd2-folder-viewer/issues']",,,napari-nd2-folder-viewer.make_qwidget,,,,,https://pypi.org/project/napari-nd2-folder-viewer,https://github.com/gatoniel/napari-nd2-folder-viewer, -253,neuralDev,0.8.2,2023-03-30,2023-11-07,napari-ndev,Tim Monko,timmonko@gmail.com,BSD-3-Clause,https://github.com/TimMonko/napari-ndev,A collection of widgets to process images from start to finish--focused on neural development.,>=3.9,"['numpy', 'magicgui>=0.8.3', 'qtpy', 'aicsimageio', 'napari>=0.4.19', 'apoc', 'pyclesperanto-prototype', 'dask', 'napari-workflows', 'seaborn', 'stackview', 'bioio>=1.1.0', 'bioio-ome-tiff', 'bioio-imageio', 'tifffile>=2023.3.15', 'scikit-image>=0.18.0', 'ruff; extra == ""dev""', 'pre-commit; extra == ""dev""', 'mkdocs; extra == ""docs""', 'mkdocs-autorefs; extra == ""docs""', 'mkdocs-material; extra == ""docs""', 'mkdocstrings; extra == ""docs""', 'mkdocstrings-python; extra == ""docs""', 'mkdocs-jupyter; extra == ""docs""', 'mkdocs-spellcheck[all]; extra == ""docs""', 'mkdocs-literate-nav; extra == ""docs""', 'black; extra == ""docs""', 'napari-pyclesperanto-assistant; extra == ""extra-plugins""', 'napari-segment-blobs-and-things-with-membranes; extra == ""extra-plugins""', 'napari-simpleitk-image-processing; extra == ""extra-plugins""', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""', 'napari-segment-blobs-and-things-with-membranes; extra == ""testing""']","# napari-ndev +264,neuralDev,0.9.5,2023-03-30,2024-12-05,napari-ndev,Tim Monko,timmonko@gmail.com,BSD-3-Clause,https://github.com/TimMonko/napari-ndev,A collection of widgets to process images from start to finish--focused on neural development.,>=3.9,"['numpy<2.0,>=1.26', 'siphash24>=1.6', 'magicgui>=0.8.3', 'magic-class', 'napari[all]>=0.4.19', 'apoc', 'pyclesperanto-prototype', 'pyclesperanto', 'dask', 'napari-workflows', 'napari-pyclesperanto-assistant', 'napari-segment-blobs-and-things-with-membranes', 'natsort', 'seaborn', 'stackview', 'tifffile>=2023.3.15', 'scikit-image>=0.18.0', 'bioio>=1.1.0', 'bioio-ome-tiff>=1', 'bioio-tifffile>=1', 'bioio-imageio>=1', 'bioio-ome-zarr>=1', 'bioio-nd2>=1', 'napari-ndev[extras]; extra == ""all""', 'napari-ndev[gpl_extras]; extra == ""all""', 'ruff; extra == ""dev""', 'pre-commit; extra == ""dev""', 'napari-ndev[testing]; extra == ""dev-all""', 'napari-ndev[docs]; extra == ""dev-all""', 'napari-ndev[dev]; extra == ""dev-all""', 'mkdocs; extra == ""docs""', 'mkdocs-autorefs; extra == ""docs""', 'mkdocs-material; extra == ""docs""', 'mkdocstrings; extra == ""docs""', 'mkdocstrings-python; extra == ""docs""', 'mkdocs-jupyter; extra == ""docs""', 'mkdocs-pdf; extra == ""docs""', 'mkdocs-spellcheck[all]; extra == ""docs""', 'mkdocs-literate-nav; extra == ""docs""', 'mkdocs-table-reader-plugin; extra == ""docs""', 'black; extra == ""docs""', 'napari-simpleitk-image-processing; extra == ""extras""', 'bioio-czi>=1.0.1; extra == ""gpl-extras""', 'bioio-lif>=1; extra == ""gpl-extras""', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""', 'bioio-czi>=1.0.1; extra == ""testing""', 'napari-ndev[extras]; extra == ""testing""']","# napari-ndev [![License BSD-3](https://img.shields.io/pypi/l/napari-ndev.svg?color=green)](https://github.com/TimMonko/napari-ndev/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-ndev.svg?color=green)](https://pypi.org/project/napari-ndev) @@ -25474,15 +26348,21 @@ If you encounter any problems, please [file an issue] along with a detailed desc [![codecov](https://codecov.io/gh/TimMonko/napari-ndev/branch/main/graph/badge.svg)](https://codecov.io/gh/TimMonko/napari-ndev) [![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-ndev)](https://napari-hub.org/plugins/napari-ndev) - + -A collection of widgets intended to serve any person seeking to process microscopy images from start to finish. The wide breadth of this plugin's scope is only made possible by the amazing libraries and plugins from the napari community. +A collection of widgets intended to serve any person seeking to process microscopy images from start to finish, *with no coding necessary*. `napari-ndev` was designed to address the **gap between the napari viewer and batch python scripting**. -## Docs +* Accepts **diverse image formats**, dimensionality, file size, and maintains key metadata. +* Allows **advanced, arbitrary image processing** workflows to be used by novices. +* **User-friendly** sparse annotation and batch training of **machine learning classifiers**. +* Flexible label measurements, parsing of metadata, and summarization for **easily readable datasets**. +* Designed for ease of use, modification, and reproducibility. -[https://timmonko.github.io/napari-ndev/](https://timmonko.github.io/napari-ndev/) +## [Check out the Docs to learn more!](https://timmonko.github.io/napari-ndev/) ----------------------------------- +### See the [poster presented at BINA 2024](https://timmonko.github.io/napari-ndev/BINA_poster/) for an overview of the plugins in action! + +### Try out the [Virtual I2K 2024 Workshop](https://timmonko.github.io/napari-ndev/tutorial/00_setup/) for an interactive tutorial! ## Installation @@ -25492,16 +26372,38 @@ A collection of widgets intended to serve any person seeking to process microsco pip install napari-ndev ``` -You may also like to install `napari-aicsimageio` to properly handle metadata with the `Image Utilities` widget. +The easiest way to get started with **napari-ndev** is to install all the optional dependencies (see note below) with: + +```bash +pip install napari-ndev[all] +``` + +---------------------------------- + +### Optional Libraries + +**napari-ndev** is most useful when interacting with some other napari plugins (e.g. napari-assistant) and can read additional filetypes. A few extra BSD3 compatible napari-plugins may be installed with [pip]: + +```bash +pip install napari-ndev[extras] +``` + +**napari-ndev** can optionally use GPL-3 licensed libraries to enhance its functionality, but are not required. If you choose to install and use these optional dependencies, you must comply with the GPL-3 license terms. The main functional improvement is from some `bioio` libraries to support extra image formats, including `czi` and `lif` files. These libraries can be installed with [pip]: ```bash -pip install napari-aicsimageio +pip install napari-ndev[gpl-extras] ``` -In addition, you may need to install specific [`bioio` readers](https://github.com/bioio-devs/bioio) to support your specific image, such as `bioio-czi` or `bioio-lif`. +In addition, you may need to install specific [`bioio` readers](https://github.com/bioio-devs/bioio) to support your specific image, such as `bioio-czi` and `bioio-lif` (included in `[gpl-extras]`) or `bioio-bioformats`. + +### Development Libraries + +For development use the `[dev]` optional libraries. You may also like to install `[docs]` and `[testing]` to verify your changes. However, `tox` will test any pull requests. You can also install `[dev-all]` to get all three of these dev dependencies. ---------------------------------- +The wide breadth of this plugin's scope is only made possible by the amazing libraries and plugins from the python and napari community, especially [Robert Haase](https://github.com/haesleinhuepf). + This [napari] plugin was generated with [Cookiecutter] using [napari]'s [cookiecutter-napari-plugin] template. ## Contributing @@ -25512,7 +26414,9 @@ the coverage at least stays the same before you submit a pull request. ## License Distributed under the terms of the [BSD-3] license, -""napari-ndev"" is free and open source software +""napari-ndev"" is free and open source software. + +Some optional libraries can be installed to add functionality to `napari-ndev`, including some that may be more restrictive than this package's BSD-3-Clause. ## Issues @@ -25525,8 +26429,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ -","['Development Status :: 3 - Alpha', 'Framework :: napari', 'Intended Audience :: Education', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Visualization', 'Topic :: Software Development :: User Interfaces', 'Topic :: Software Development :: Libraries :: Python Modules', 'Topic :: Utilities']","['Bug Tracker, https://github.com/TimMonko/napari-ndev/issues', 'Documentation, https://timmonko.github.io/napari-ndev/', 'Source Code, https://github.com/TimMonko/napari-ndev']",,,napari-ndev.make_utilities_container,,,,,https://pypi.org/project/napari-ndev,https://github.com/TimMonko/napari-ndev, -254,napari-ndtiffs,0.2.1,2022-01-27,2023-06-18,napari-ndtiffs,Talley Lambert,Talley Lambert ,BSD-3-Clause,https://github.com/tlambert03/napari-ndtiffs,napari plugin for nd tiff folders with OpenCl deskew,>=3.8,"['dask[array]', 'napari-plugin-engine>=0.1.4', 'numpy', 'python-dateutil', 'scipy', 'tifffile', ""black; extra == 'dev'"", ""ipython; extra == 'dev'"", ""mypy; extra == 'dev'"", ""pdbpp; extra == 'dev'"", ""rich; extra == 'dev'"", ""ruff; extra == 'dev'"", ""pyopencl; extra == 'opencl'"", ""pyopencl; extra == 'test'"", ""pytest; extra == 'test'"", ""pytest-cov; extra == 'test'""]","# napari-ndtiffs +","['Development Status :: 3 - Alpha', 'Framework :: napari', 'Intended Audience :: Education', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Visualization', 'Topic :: Software Development :: User Interfaces', 'Topic :: Software Development :: Libraries :: Python Modules', 'Topic :: Utilities']","['Bug Tracker, https://github.com/TimMonko/napari-ndev/issues', 'Documentation, https://timmonko.github.io/napari-ndev/', 'Source Code, https://github.com/TimMonko/napari-ndev']",napari-ndev.get_reader,,napari-ndev.make_utilities_container,,"['*.1sc', '*.2fl', '*.3fr', '*.acff', '*.acqp', '*.afi', '*.afm', '*.aim', '*.al3d', '*.ali', '*.am', '*.amiramesh', '*.ano', '*.apl', '*.arf', '*.array-like', '*.arw', '*.avi', '*.bay', '*.bif', '*.bin', '*.bip', '*.bmp', '*.bmq', '*.bsdf', '*.bufr', '*.bw', '*.c01', '*.cap', '*.cat', '*.cfg', '*.ch5', '*.cif', '*.cine', '*.cr2', '*.crw', '*.cs1', '*.csv', '*.ct', '*.ct.img', '*.cur', '*.cut', '*.cxd', '*.czi', '*.dat', '*.db', '*.dc2', '*.dcm', '*.dcr', '*.dcx', '*.dds', '*.df3', '*.dicom', '*.dm2', '*.dm3', '*.dng', '*.drf', '*.dsc', '*.dti', '*.dv', '*.ecw', '*.emf', '*.eps', '*.epsi', '*.erf', '*.exp', '*.exr', '*.fake', '*.fdf', '*.fff', '*.ffr', '*.fid', '*.fit', '*.fits', '*.flc', '*.flex', '*.fli', '*.fpx', '*.frm', '*.ftc', '*.fts', '*.ftu', '*.fz', '*.g3', '*.gbr', '*.gdcm', '*.gel', '*.gif', '*.gipl', '*.grey', '*.grib', '*.h5', '*.hdf', '*.hdf5', '*.hdp', '*.hdr', '*.hed', '*.his', '*.htd', '*.htm', '*.html', '*.hx', '*.i2i', '*.ia', '*.icns', '*.ico', '*.ics', '*.ids', '*.iff', '*.iim', '*.iiq', '*.im', '*.im3', '*.img', '*.imggz', '*.ims', '*.inf', '*.inr', '*.ipl', '*.ipm', '*.ipw', '*.j2c', '*.j2k', '*.jfif', '*.jif', '*.jng', '*.jp2', '*.jpc', '*.jpe', '*.jpeg', '*.jpf', '*.jpg', '*.jpk', '*.jpx', '*.jxr', '*.k25', '*.kc2', '*.kdc', '*.klb', '*.koa', '*.l2d', '*.labels', '*.lbm', '*.lei', '*.lfp', '*.lfr', '*.lif', '*.liff', '*.lim', '*.lms', '*.lsm', '*.mdb', '*.mdc', '*.mef', '*.mgh', '*.mha', '*.mhd', '*.mic', '*.mkv', '*.mnc', '*.mnc2', '*.mng', '*.mod', '*.mos', '*.mov', '*.mp4', '*.mpeg', '*.mpg', '*.mpo', '*.mrc', '*.mri', '*.mrw', '*.msp', '*.msr', '*.mtb', '*.mvd2', '*.naf', '*.nd', '*.nd2', '*.ndpi', '*.ndpis', '*.nef', '*.nhdr', '*.nia', '*.nii', '*.nii.gz', '*.niigz', '*.npz', '*.nrrd', '*.nrw', '*.obf', '*.oib', '*.oif', '*.oir', '*.ome', '*.ome.tif', '*.ome.tiff', '*.orf', '*.par', '*.pbm', '*.pcd', '*.pcoraw', '*.pct', '*.pcx', '*.pef', '*.pfm', '*.pgm', '*.pic', '*.pict', '*.png', '*.pnl', '*.ppm', '*.pr3', '*.ps', '*.psd', '*.ptx', '*.pxn', '*.pxr', '*.qptiff', '*.qtk', '*.r3d', '*.raf', '*.ras', '*.raw', '*.rcpnl', '*.rdc', '*.rec', '*.rgb', '*.rgba', '*.rw2', '*.rwl', '*.rwz', '*.scan', '*.scn', '*.sdt', '*.seq', '*.sif', '*.sld', '*.sm2', '*.sm3', '*.spc', '*.spe', '*.spi', '*.sr2', '*.srf', '*.srw', '*.st', '*.sti', '*.stk', '*.stp', '*.svs', '*.swf', '*.sxm', '*.targa', '*.tfr', '*.tga', '*.thm', '*.tif', '*.tiff', '*.tim', '*.tnb', '*.top', '*.txt', '*.v', '*.vff', '*.vms', '*.vsi', '*.vtk', '*.vws', '*.wap', '*.wat', '*.wav', '*.wbm', '*.wbmp', '*.wdp', '*.webp', '*.wlz', '*.wmf', '*.wmv', '*.wpi', '*.xbm', '*.xdce', '*.xml', '*.xpm', '*.xqd', '*.xqf', '*.xv', '*.xys', '*.zfp', '*.zfr', '*.zip', '*.zpo', '*.zvi']",,,https://pypi.org/project/napari-ndev,https://github.com/TimMonko/napari-ndev, +265,napari-ndtiffs,0.2.1,2022-01-27,2023-06-18,napari-ndtiffs,Talley Lambert,Talley Lambert ,BSD-3-Clause,https://github.com/tlambert03/napari-ndtiffs,napari plugin for nd tiff folders with OpenCl deskew,>=3.8,"['dask[array]', 'napari-plugin-engine>=0.1.4', 'numpy', 'python-dateutil', 'scipy', 'tifffile', ""black; extra == 'dev'"", ""ipython; extra == 'dev'"", ""mypy; extra == 'dev'"", ""pdbpp; extra == 'dev'"", ""rich; extra == 'dev'"", ""ruff; extra == 'dev'"", ""pyopencl; extra == 'opencl'"", ""pyopencl; extra == 'test'"", ""pytest; extra == 'test'"", ""pytest-cov; extra == 'test'""]","# napari-ndtiffs [![License](https://img.shields.io/pypi/l/napari-ndtiffs.svg?color=green)](https://raw.githubusercontent.com/tlambert03/napari-ndtiffs/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-ndtiffs.svg?color=green)](https://pypi.org/project/napari-ndtiffs) @@ -25659,7 +26563,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyOpenCL]: https://documen.tician.de/pyopencl/ [CuPy]: https://docs.cupy.dev/ ","['Development Status :: 3 - Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10']","['Bug Tracker, https://github.com/tlambert03/napari-ndtiffs/issues', 'Documentation, https://github.com/tlambert03/napari-ndtiffs#README.md', 'Source Code, https://github.com/tlambert03/napari-ndtiffs', 'User Support, https://github.com/tlambert03/napari-ndtiffs/issues']",napari-ndtiffs.get_reader,,,,['*'],,,https://pypi.org/project/napari-ndtiffs,https://github.com/tlambert03/napari-ndtiffs, -255,Napari NiBabel,0.1.0,2023-04-11,2023-06-18,napari-nibabel,Ashley Anderson,aandersoniii@chanzuckerberg.com,MIT,https://pypi.org/project/napari-nibabel/,Read access to some common neuroimaging file formats,>=3.8,"['numpy', 'nibabel[dicom,dicomfs,spm]', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-nibabel +266,Napari NiBabel,0.1.0,2023-04-11,2023-06-18,napari-nibabel,Ashley Anderson,aandersoniii@chanzuckerberg.com,MIT,https://pypi.org/project/napari-nibabel/,Read access to some common neuroimaging file formats,>=3.8,"['numpy', 'nibabel[dicom,dicomfs,spm]', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-nibabel [![License MIT](https://img.shields.io/pypi/l/napari-nibabel.svg?color=green)](https://github.com/aganders3/napari-nibabel/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-nibabel.svg?color=green)](https://pypi.org/project/napari-nibabel) @@ -25716,7 +26620,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']",,napari-nibabel.get_reader,,,,"['*.par', '*.hdr', '*.nii', '*.nii.gz', '*.gii', '*.dcm']",,,https://pypi.org/project/napari-nibabel/,, -256,napari-nifti,0.0.16,2023-04-19,2023-07-26,napari-nifti,Karol Gotkowski,karol.gotkowski@dkfz.de,Apache-2.0,https://github.com/MIC-DKFZ/napari-nifti,A napari plugin for reading and writing NIFTI files that have the extension .nii or .nii.gz.,>=3.8,"['medvol', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""']","# napari-nifti +267,napari-nifti,0.0.17,2023-04-19,2023-07-26,napari-nifti,Karol Gotkowski,karol.gotkowski@dkfz.de,Apache-2.0,https://github.com/MIC-DKFZ/napari-nifti,A napari plugin for reading and writing NIFTI files that have the extension .nii or .nii.gz.,>=3.8,"['medvol', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""']","# napari-nifti [![License Apache Software License 2.0](https://img.shields.io/pypi/l/napari-nifti.svg?color=green)](https://github.com/MIC-DKFZ/napari-nifti/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-nifti.svg?color=green)](https://pypi.org/project/napari-nifti) @@ -25792,8 +26696,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc napari-nifti is developed and maintained by the Applied Computer Vision Lab (ACVL) of [Helmholtz Imaging](http://helmholtz-imaging.de) and the [Division of Medical Image Computing](https://www.dkfz.de/en/mic/index.php) at the [German Cancer Research Center (DKFZ)](https://www.dkfz.de/en/index.html). -","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/MIC-DKFZ/napari-nifti/issues', 'Documentation, https://github.com/MIC-DKFZ/napari-nifti#README.md', 'Source Code, https://github.com/MIC-DKFZ/napari-nifti', 'User Support, https://github.com/MIC-DKFZ/napari-nifti/issues']",napari-nifti.get_reader,napari-nifti.write_single_image,,,"['*.nii', '*.nii.gz', '*.nrrd']","['.nii', '.nii.gz', '.nrrd']","['.nii', '.nii.gz', '.nrrd']",https://pypi.org/project/napari-nifti,https://github.com/MIC-DKFZ/napari-nifti, -257,napari-nikon-nd2,0.1.3,2022-02-07,2023-06-18,napari-nikon-nd2,Chris Wood,cwood1967@gmail.com,Apache Software License 2.0,https://github.com/cwood1967/napari-nikon-nd2,Opens Nikon ND2 files into napari.,>=3.6,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'nd2reader']","# napari-nikon-nd2 +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/MIC-DKFZ/napari-nifti/issues', 'Documentation, https://github.com/MIC-DKFZ/napari-nifti#README.md', 'Source Code, https://github.com/MIC-DKFZ/napari-nifti', 'User Support, https://github.com/MIC-DKFZ/napari-nifti/issues']",napari-nifti.get_reader,napari-nifti.write_single_image,,,"['*.gz', '*.nii', '*.nii.gz', '*.nrrd']","['.gz', '.nii', '.nii.gz', '.nrrd']","['.gz', '.nii', '.nii.gz', '.nrrd']",https://pypi.org/project/napari-nifti,https://github.com/MIC-DKFZ/napari-nifti, +268,napari-nikon-nd2,0.1.3,2022-02-07,2023-06-18,napari-nikon-nd2,Chris Wood,cwood1967@gmail.com,Apache Software License 2.0,https://github.com/cwood1967/napari-nikon-nd2,Opens Nikon ND2 files into napari.,>=3.6,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'nd2reader']","# napari-nikon-nd2 [![License](https://img.shields.io/pypi/l/napari-nikon-nd2.svg?color=green)](https://github.com/cwood1967/napari-nikon-nd2/blob/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-nikon-nd2.svg?color=green)](https://pypi.org/project/napari-nikon-nd2) @@ -25862,7 +26766,7 @@ the [Allen Institute IO] plugin as examples. [Napari Delta Vision Reader]: https://github.com/tlambert03/napari-dv ","['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: Apache Software License']",,napari-nikon-nd2.napari_get_reader,,,,['*'],,,https://pypi.org/project/napari-nikon-nd2,https://github.com/cwood1967/napari-nikon-nd2, -258,napari NLM,0.0.4,2023-07-13,2023-07-13,napari-nlm,Martin Weigert,marweigert@gmail.com,BSD-3-Clause,https://github.com/maweigert/napari-nlm,NLM (non local means) denoising,>=3.8,"['numpy', 'magicgui', 'qtpy', 'pyopencl (==2022.1.5)', 'gputools', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-nlm +269,napari NLM,0.0.4,2023-07-13,2023-07-13,napari-nlm,Martin Weigert,marweigert@gmail.com,BSD-3-Clause,https://github.com/maweigert/napari-nlm,NLM (non local means) denoising,>=3.8,"['numpy', 'magicgui', 'qtpy', 'pyopencl (==2022.1.5)', 'gputools', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-nlm [![License BSD-3](https://img.shields.io/pypi/l/napari-nlm.svg)](https://github.com/maweigert/napari-nlm/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-nlm.svg)](https://pypi.org/project/napari-nlm) @@ -25903,7 +26807,7 @@ You can install `napari-nlm` via [pip]: Distributed under the terms of the [BSD-3] license, ""napari-nlm"" is free and open source software ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/maweigert/napari-nlm/issues', 'Documentation, https://github.com/maweigert/napari-nlm#README.md', 'Source Code, https://github.com/maweigert/napari-nlm', 'User Support, https://github.com/maweigert/napari-nlm/issues']",,,napari-nlm.denoise_nlm,napari-nlm.make_sample_data_2d,,,,https://pypi.org/project/napari-nlm,https://github.com/maweigert/napari-nlm, -259,Napari nucleAIzer plugin,0.2.5,,,napari-nucleaizer,Ervin Tasnadi,tasnadi.ervin@brc.hu,BSD-3,,A GUI interface for training and prediction using the nucleAIzer nuclei detection method.,>=3.8,"['napari', 'qtpy', 'jsonpickle', 'numpy', 'scikit-image', 'imageio', 'nucleaizer-backend']","# napari_nucleaizer +270,Napari nucleAIzer plugin,0.2.5,,,napari-nucleaizer,Ervin Tasnadi,tasnadi.ervin@brc.hu,BSD-3,,A GUI interface for training and prediction using the nucleAIzer nuclei detection method.,>=3.8,"['napari', 'qtpy', 'jsonpickle', 'numpy', 'scikit-image', 'imageio', 'nucleaizer-backend']","# napari_nucleaizer [![License](https://img.shields.io/pypi/l/napari-nucleaizer.svg?color=green)](https://github.com/etasnadi/napari-nucleaizer/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-nucleaizer.svg?color=green)](https://pypi.org/project/napari-nucleaizer) @@ -25993,7 +26897,7 @@ Use the github issue tracker if you experinece unexpected behaviour. You can contact me in [e-mail](mailto:tasnadi.ervin@MY-INSTITUTE) where MY-INSTITUTE is `brc.hu`. ","['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/etasnadi/napari_nucleaizer/issues', 'Documentation, https://napari-nucleaizer-docs.readthedocs.io/en/latest/index.html', 'Source Code, https://github.com/etasnadi/napari_nucleaizer', 'User Support, https://github.com/etasnadi/napari_nucleaizer/issues']",,,napari-nucleaizer.launch,,,,,https://pypi.org/project/napari-nucleaizer,, -260,napari-nyxus,0.2.0,,,napari-nyxus,Jesse McKinzie,Jesse.McKinzie@axleinfo.com,,,A napari plugin for calculating features from intensity-label image data,,"['napari', 'pandas', 'numpy', 'nyxus >=0.5.0', 'imagecodecs', 'magicgui', 'napari-workflows', 'qtpy', 'superqt', 'napari-skimage-regionprops >=0.10.1', 'matplotlib', 'filepattern >=2.0.0']","# Nyxus Napari +271,napari-nyxus,0.2.0,2024-11-20,2024-11-20,napari-nyxus,Jesse McKinzie,Jesse.McKinzie@axleinfo.com,,https://pypi.org/project/napari-nyxus,A napari plugin for calculating features from intensity-label image data,,"['napari', 'pandas', 'numpy', 'nyxus >=0.5.0', 'imagecodecs', 'magicgui', 'napari-workflows', 'qtpy', 'superqt', 'napari-skimage-regionprops >=0.10.1', 'matplotlib', 'filepattern >=2.0.0']","# Nyxus Napari Nyxus Napari is a Napari plugin for running feature calculations on image-segmentation image pairs, using the Nyxus application to compute features. Nyxus is a feature-rich, highly optimized, Python/C++ application capable @@ -26114,7 +27018,7 @@ it does not provide functionality to handle large single images that do not fit limitations of Napari. For large images, it is recommended to install the Python or CLI version of Nyxus. For more information, see https://github.com/PolusAI/nyxus. ",['Framework :: napari'],,,,napari-nyxus.nyxus_widget,,,,,https://pypi.org/project/napari-nyxus,, -261,obj file reader,1.0.0,2023-04-12,2023-06-18,napari-obj,Léo Guignard,leo.guignard@univ-amu.fr,MIT,https://github.com/guignardlab/napari-obj,A plugin to read .obj files,>=3.8,"['numpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-obj +272,obj file reader,1.0.0,2023-04-12,2023-06-18,napari-obj,Léo Guignard,leo.guignard@univ-amu.fr,MIT,https://github.com/guignardlab/napari-obj,A plugin to read .obj files,>=3.8,"['numpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-obj + +## Usage + +napari-phasors is composed of a few widgets that allow reading a few specific FLIM and hyperspectral file formats, perform phasor analysis, and display and export the results of manual phasor selections. + +### Sample Data + +Two sample datasets for FLIM are provided, along with their corresponding calibration images. Additionally, a paramecium image is included as sample data for hyperspectral analysis. + +![sample_data](https://github.com/napari-phasors/napari-phasors/raw/main/gifs/sample_data.gif) + +### Phasor Analysis + +#### Plot FLIM Data + +FLIM phasor data can be plotted as a 2D histogram or scatter plot. The colormap, the number of bins and the scale of the colors can be customized. +Filtering and thresholding can also be applied to process phasor data and the mean intensity image. + +![phasors_flim](https://github.com/napari-phasors/napari-phasors/raw/main/gifs/phasors_flim.gif) + +#### Plot Hyperspectral Data + +Hyperspectral phasor data can also be plotted as a 2D histogram or scatter plot and visualized in the full universal circle. + +![phasors_hyperspectral](https://github.com/napari-phasors/napari-phasors/raw/main/gifs/phasors_hyperspectral.gif) + +### Apparent Lifetime Display + +A FLIM image can be colormapped according to the phase or modulation apparent lifetime. A histogram is also created for visualization of the distribution of apparent lifetimes of the FLIM image. + +![lifetimes](https://github.com/napari-phasors/napari-phasors/raw/main/gifs/lifetimes.gif) + +### Phasor Calibration + +FLIM images can be calibrated using a reference image acquired under the same experimental parameters. This reference image should consist of a homogeneous solution of a fluorophore with a known fluorescence lifetime and the laser frequency used in the experiment. This ensures accuracy and consistency in lifetime measurements. + +![calibration](https://github.com/napari-phasors/napari-phasors/raw/main/gifs/calibration.gif) + +### Phasor Custom Import + +Supported file formats (`.tif`, `.ptu`, `.sdt`, `.fbd`, `.lsm`, `.ome.tif`) can be read and transformed to the phasor space. Additional options, such as the harmonics, channels and frames, can be specified depending on the file format to be read. + +![custom_import](https://github.com/napari-phasors/napari-phasors/raw/main/gifs/custom_import.gif) + +### Phasor Export + +The average intensity image and the phasor coordinates can be exported as OME-TIF files that can be read by napari-phasors and PhasorPy. Alternatively, the phasor coordinates, as well as the selections (cursors) can be exported as a CSV file. + +![export_phasors](https://github.com/napari-phasors/napari-phasors/raw/main/gifs/export_phasors.gif) + +## Installation + +You can install `napari-phasors` via [pip]. Follow these steps from a terminal. + +We recommend using `miniforge` whenever possible. Click [here](https://github.com/conda-forge/miniforge?tab=readme-ov-file#miniforge) to choose the right download option for your OS. +**If you do not use `miniforge`, but rather Anaconda or Miniconda, replace the `mamba` term whenever you see it below with `conda`.** + +Create a conda environment with napari by typing : + + mamba create -n napari-phasors-env napari pyqt python=3.10 + +Activate the environment : + + mamba activate napari-phasors-env + +Install `napari-phasors` via [pip] : + + pip install napari-phasors + +Alternatively, install latest development version with : + + pip install git+https://github.com/napari-phasors/napari-phasors.git + +## Contributing + +Contributions are very welcome. Tests can be run with [tox], please ensure +the coverage at least stays the same before you submit a pull request. + +## License + +Distributed under the terms of the [BSD-3] license, +""napari-phasors"" is free and open source software + +## Issues + +If you encounter any problems, please [file an issue] along with a detailed description. + +[napari]: https://github.com/napari/napari +[Cookiecutter]: https://github.com/audreyr/cookiecutter +[@napari]: https://github.com/napari +[MIT]: http://opensource.org/licenses/MIT +[BSD-3]: http://opensource.org/licenses/BSD-3-Clause +[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt +[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt +[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0 +[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt +[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin + +[file an issue]: https://github.com/napari-phasors/napari-phasors/issues + +[napari]: https://github.com/napari/napari +[tox]: https://tox.readthedocs.io/en/latest/ +[pip]: https://pypi.org/project/pip/ +[PyPI]: https://pypi.org/ +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/napari-phasors/napari-phasors/issues', 'Documentation, https://github.com/napari-phasors/napari-phasors#README.md', 'Source Code, https://github.com/napari-phasors/napari-phasors', 'User Support, https://github.com/napari-phasors/napari-phasors/issues']",napari-phasors.get_reader,napari-phasors.write_ome_tiff,napari-phasors.PhasorTransform,napari-phasors.convallaria_FLIM_sample_data,"['*.fbd', '*.ptu', '*.lsm', '*ome.tif', '*.tif', '*.sdt']",,,https://pypi.org/project/napari-phasors,, +288,napari-PHILOW,0.2.0,2022-08-18,2024-05-21,napari-PHILOW,Hiroki Kawai,h.kawai888@gmail.com,GPLv3,https://github.com/neurobiology-ut/PHILOW,PHILOW is an interactive deep learning-based platform for 3D datasets,>=3.8,"['numpy', 'scikit-image', 'dask-image', 'opencv-python', 'matplotlib', 'pandas', 'torch', 'torchvision', 'segmentation-models-pytorch', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-PHILOW [![License](https://img.shields.io/pypi/l/napari-PHILOW.svg?color=green)](https://github.com/neurobiology-ut/PHILOW/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-PHILOW.svg?color=green)](https://pypi.org/project/napari-PHILOW) @@ -27619,7 +28650,7 @@ Shogo Suga, Koki Nakamura, Yu Nakanishi, Bruno M Humbel, Hiroki Kawai, Yusuke Hi [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/neurobiology-ut/PHILOW/issues', 'Documentation, https://github.com/neurobiology-ut/PHILOW#README.md', 'Source Code, https://github.com/neurobiology-ut/PHILOW', 'User Support, https://github.com/neurobiology-ut/PHILOW/issues']",,,napari-PHILOW.AnnotationMode,,,,,https://pypi.org/project/napari-PHILOW,https://github.com/neurobiology-ut/PHILOW, -277,napari-PICASSO,0.3.0,2022-07-07,2023-06-18,napari-PICASSO,Kunal Pandit,kpandit@nygenome.org,GPL-3.0-only,https://github.com/nygctech/PICASSO,Blind fluorescence unmixing,>=3.8,"['numpy', 'magicgui', 'qtpy', 'dask', 'psutil', ""tox ; extra == 'testing'"", ""napari[all] ; extra == 'testing'"", ""torch ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""xarray ; extra == 'testing'""]","# napari-PICASSO +289,napari-PICASSO,0.3.0,2022-07-07,2023-06-18,napari-PICASSO,Kunal Pandit,kpandit@nygenome.org,GPL-3.0-only,https://github.com/nygctech/PICASSO,Blind fluorescence unmixing,>=3.8,"['numpy', 'magicgui', 'qtpy', 'dask', 'psutil', ""tox ; extra == 'testing'"", ""napari[all] ; extra == 'testing'"", ""torch ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""xarray ; extra == 'testing'""]","# napari-PICASSO [![License](https://img.shields.io/pypi/l/napari-curtain.svg?color=green)](https://github.com/nygctech/PICASSO/blob/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-PICASSO.svg?color=green)](https://pypi.org/project/napari-PICASSO) @@ -27671,7 +28702,7 @@ PICASSO is an algorithm to remove spillover fluorescence by minimizing the mutua [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']","['Bug Tracker, https://github.com/nygctech/PICASSO/issues']",,,napari-PICASSO.PicassoWidget,,,,,https://pypi.org/project/napari-PICASSO,https://github.com/nygctech/PICASSO, -278,Pixel correction,0.1.4,,,napari-pixel-correction,Herearii Metuarea,herearii.metuarea@gmail.com,BSD-3-Clause,,Plugin to correct manually pixel wrongly predicted on image by annotation,>=3.8,"['numpy', 'magicgui', 'qtpy', 'scikit-image', 'napari', 'matplotlib', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-pixel-correction +290,Pixel correction,0.1.4,,,napari-pixel-correction,Herearii Metuarea,herearii.metuarea@gmail.com,BSD-3-Clause,,Plugin to correct manually pixel wrongly predicted on image by annotation,>=3.8,"['numpy', 'magicgui', 'qtpy', 'scikit-image', 'napari', 'matplotlib', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-pixel-correction [![License BSD-3](https://img.shields.io/pypi/l/napari-pixel-correction.svg?color=green)](https://github.com/hereariim/napari-pixel-correction/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-pixel-correction.svg?color=green)](https://pypi.org/project/napari-pixel-correction) @@ -27768,7 +28799,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['Bug Tracker, https://github.com/hereariim/napari-pixel-correction/issues', 'Documentation, https://github.com/hereariim/napari-pixel-correction#README.md', 'Source Code, https://github.com/hereariim/napari-pixel-correction', 'User Support, https://github.com/hereariim/napari-pixel-correction/issues']",napari-pixel-correction.get_reader,napari-pixel-correction.write_multiple,napari-pixel-correction.load,,['*.npy'],,['.npy'],https://pypi.org/project/napari-pixel-correction,, -279,PixSeq,1.0.3,,,napari-PixSeq,Piers Turner,piers.turner@physics.ox.ac.uk,MIT,,A Napari plugin for extracting time series traces from Single Molecule Localisation Microsocpy (SMLM) data.,>=3.8,"['napari[all]', 'numpy', 'magicgui', 'qtpy', 'scipy', 'pyqtgraph', 'picassosr', 'pandas', 'matplotlib', 'opencv-python', 'tqdm', 'originpro', 'pyqt5-tools', 'torch', 'cellpose >=3.0.1', 'omnipose', 'trackpy', 'shapely', 'astropy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-PixSeq +291,PixSeq,1.0.3,,,napari-PixSeq,Piers Turner,piers.turner@physics.ox.ac.uk,MIT,,A Napari plugin for extracting time series traces from Single Molecule Localisation Microsocpy (SMLM) data.,>=3.8,"['napari[all]', 'numpy', 'magicgui', 'qtpy', 'scipy', 'pyqtgraph', 'picassosr', 'pandas', 'matplotlib', 'opencv-python', 'tqdm', 'originpro', 'pyqt5-tools', 'torch', 'cellpose >=3.0.1', 'omnipose', 'trackpy', 'shapely', 'astropy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-PixSeq [![License MIT](https://img.shields.io/pypi/l/napari-GapSeq2.svg?color=green)](https://github.com/piedrro/napari-PixSeq/blob/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-GapSeq2.svg?color=green)](https://pypi.org/project/napari-PixSeq/) @@ -27844,7 +28875,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/piedrro/napari-PixSeq/issues', 'Documentation, https://github.com/piedrro/napari-PixSeq#README.md', 'Source Code, https://github.com/piedrro/napari-PixSeq', 'User Support, https://github.com/piedrro/napari-PixSeq/issues']",,,napari-PixSeq.make_qwidget,,,,,https://pypi.org/project/napari-PixSeq,, -280,napari-plot,0.1.5,2022-02-04,2023-06-18,napari-plot,Lukasz G. Migas,lukas.migas@yahoo.com,BSD-3,https://github.com/lukasz-migas/napari-1d,Plugin providing support for 1d plotting in napari.,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'qtpy', 'qtawesome', 'napari (<0.4.15,>=0.4.13)', 'matplotlib', 'vispy (>=0.9.6)', ""PySide2 (!=5.15.0,>=5.13.2) ; extra == 'all'"", ""pre-commit (>=2.9.0) ; extra == 'dev'"", ""black (==22.1.0) ; extra == 'dev'"", ""flake8 (==4.0.1) ; extra == 'dev'"", ""PySide2 (!=5.15.0,>=5.13.2) ; extra == 'dev'"", ""pytest ; extra == 'dev'"", ""pytest-qt ; extra == 'dev'"", ""scikit-image ; extra == 'dev'"", ""PyQt5 (!=5.15.0,>=5.12.3) ; extra == 'pyqt'"", ""PyQt5 (!=5.15.0,>=5.12.3) ; extra == 'pyqt5'"", ""PySide2 (!=5.15.0,>=5.13.2) ; extra == 'pyside'"", ""PySide2 (!=5.15.0,>=5.13.2) ; extra == 'pyside2'"", ""PyQt5 (!=5.15.0,>=5.12.3) ; extra == 'qt'"", ""pytest ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""scikit-image ; extra == 'testing'""]","# napari-plot +292,napari-plot,0.1.5,2022-02-04,2023-06-18,napari-plot,Lukasz G. Migas,lukas.migas@yahoo.com,BSD-3,https://github.com/lukasz-migas/napari-1d,Plugin providing support for 1d plotting in napari.,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'qtpy', 'qtawesome', 'napari (<0.4.15,>=0.4.13)', 'matplotlib', 'vispy (>=0.9.6)', ""PySide2 (!=5.15.0,>=5.13.2) ; extra == 'all'"", ""pre-commit (>=2.9.0) ; extra == 'dev'"", ""black (==22.1.0) ; extra == 'dev'"", ""flake8 (==4.0.1) ; extra == 'dev'"", ""PySide2 (!=5.15.0,>=5.13.2) ; extra == 'dev'"", ""pytest ; extra == 'dev'"", ""pytest-qt ; extra == 'dev'"", ""scikit-image ; extra == 'dev'"", ""PyQt5 (!=5.15.0,>=5.12.3) ; extra == 'pyqt'"", ""PyQt5 (!=5.15.0,>=5.12.3) ; extra == 'pyqt5'"", ""PySide2 (!=5.15.0,>=5.13.2) ; extra == 'pyside'"", ""PySide2 (!=5.15.0,>=5.13.2) ; extra == 'pyside2'"", ""PyQt5 (!=5.15.0,>=5.12.3) ; extra == 'qt'"", ""pytest ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""scikit-image ; extra == 'testing'""]","# napari-plot [![License](https://img.shields.io/pypi/l/napari-plot.svg?color=green)](https://github.com/lukasz-migas/napari-1d/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-plot.svg?color=green)](https://pypi.org/project/napari-plot) @@ -27964,7 +28995,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/lukasz-migas/napari-1d/issues', 'Documentation, https://github.com/lukasz-migas/napari-1d#README.md', 'Source Code, https://github.com/lukasz-migas/napari-1d', 'User Support, https://github.com/lukasz-migas/napari-1d/issues']",,,napari-plot.NapariPlotWidget,,,,,https://pypi.org/project/napari-plot,https://github.com/lukasz-migas/napari-1d, -281,napari-plot-profile,0.2.2,2022-02-05,2023-06-18,napari-plot-profile,"Robert Haase, Marcelo Leomil Zoccoler",robert.haase@tu-dresden.de,BSD-3-Clause,https://github.com/haesleinhuepf/napari-plot-profile,Plot intensity along a line and create topographical views in napari,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'pyqtgraph', 'napari', 'napari-tools-menu', 'napari-skimage-regionprops (>=0.2.4)', 'imageio (!=2.22.1)']","# napari-plot-profile (npp) +293,napari-plot-profile,0.2.2,2022-02-05,2023-06-18,napari-plot-profile,"Robert Haase, Marcelo Leomil Zoccoler",robert.haase@tu-dresden.de,BSD-3-Clause,https://github.com/haesleinhuepf/napari-plot-profile,Plot intensity along a line and create topographical views in napari,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'pyqtgraph', 'napari', 'napari-tools-menu', 'napari-skimage-regionprops (>=0.2.4)', 'imageio (!=2.22.1)']","# napari-plot-profile (npp) [![License](https://img.shields.io/pypi/l/napari-plot-profile.svg?color=green)](https://github.com/haesleinhuepf/napari-plot-profile/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-plot-profile.svg?color=green)](https://pypi.org/project/napari-plot-profile) @@ -28047,7 +29078,7 @@ If you encounter any problems, please create a thread on [image.sc] along with a [image.sc]: https://image.sc [@haesleinhuepf]: https://twitter.com/haesleinhuepf ","['Development Status :: 3 - Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/haesleinhuepf/napari-plot-profile/issues', 'Documentation, https://github.com/haesleinhuepf/napari-plot-profile#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-plot-profile', 'User Support, https://github.com/haesleinhuepf/napari-plot-profile/issues']",,,napari-plot-profile.PlotProfile,,,,,https://pypi.org/project/napari-plot-profile,https://github.com/haesleinhuepf/napari-plot-profile, -282,napari-plugin-search,0.1.4,2022-02-04,2023-06-18,napari-plugin-search,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,https://github.com/haesleinhuepf/napari-plugin-search,Find napari plugins,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari-tools-menu']","# napari-plugin-search +294,napari-plugin-search,0.1.4,2022-02-04,2023-06-18,napari-plugin-search,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,https://github.com/haesleinhuepf/napari-plugin-search,Find napari plugins,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari-tools-menu']","# napari-plugin-search [![License](https://img.shields.io/pypi/l/napari-plugin-search.svg?color=green)](https://github.com/haesleinhuepf/napari-plugin-search/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-plugin-search.svg?color=green)](https://pypi.org/project/napari-plugin-search) @@ -28106,7 +29137,7 @@ If you encounter any problems, please create a thread on [image.sc] along with a [image.sc]: https://image.sc [@haesleinhuepf]: https://twitter.com/haesleinhuepf ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/haesleinhuepf/napari-plugin-search/issues', 'Documentation, https://github.com/haesleinhuepf/napari-plugin-search#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-plugin-search', 'User Support, https://github.com/haesleinhuepf/napari-plugin-search/issues']",,,napari-plugin-search.PluginSearch,,,,,https://pypi.org/project/napari-plugin-search,https://github.com/haesleinhuepf/napari-plugin-search, -283,Points2Regions,0.0.2,,,napari-points2regions,Jonas Windhager,jonas@windhager.io,MIT,,A napari plugin for Points2Regions,>=3.9,"['colorcet', 'magicgui', 'napari', 'numpy', 'pandas', 'points2regions >=0.0.4', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-points2regions +295,Points2Regions,0.0.2,,,napari-points2regions,Jonas Windhager,jonas@windhager.io,MIT,,A napari plugin for Points2Regions,>=3.9,"['colorcet', 'magicgui', 'napari', 'numpy', 'pandas', 'points2regions >=0.0.4', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-points2regions [![License MIT](https://img.shields.io/pypi/l/napari-points2regions.svg?color=green)](https://github.com/wahlby-lab/napari-points2regions/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-points2regions.svg?color=green)](https://pypi.org/project/napari-points2regions) @@ -28173,7 +29204,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Framework :: napari', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/wahlby-lab/napari-points2regions/issues', 'Documentation, https://github.com/wahlby-lab/napari-points2regions#README.md', 'Source Code, https://github.com/wahlby-lab/napari-points2regions', 'User Support, https://github.com/wahlby-lab/napari-points2regions/issues']",,,napari-points2regions.load_points,,,,,https://pypi.org/project/napari-points2regions,, -284,Projection of Points layers,0.0.2,2023-04-12,2023-06-18,napari-pointslayer-projection,Niklas Netter,niknett@gmail.com,BSD-3-Clause,https://github.com/gatoniel/napari-pointslayer-projection,This plugin creates a 2d projection of all your points.,>=3.8,"['numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-pointslayer-projection +296,Projection of Points layers,0.0.2,2023-04-12,2023-06-18,napari-pointslayer-projection,Niklas Netter,niknett@gmail.com,BSD-3-Clause,https://github.com/gatoniel/napari-pointslayer-projection,This plugin creates a 2d projection of all your points.,>=3.8,"['numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-pointslayer-projection [![License BSD-3](https://img.shields.io/pypi/l/napari-pointslayer-projection.svg?color=green)](https://github.com/gatoniel/napari-pointslayer-projection/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-pointslayer-projection.svg?color=green)](https://pypi.org/project/napari-pointslayer-projection) @@ -28241,7 +29272,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/gatoniel/napari-pointslayer-projection/issues', 'Documentation, https://github.com/gatoniel/napari-pointslayer-projection#README.md', 'Source Code, https://github.com/gatoniel/napari-pointslayer-projection', 'User Support, https://github.com/gatoniel/napari-pointslayer-projection/issues']",,,napari-pointslayer-projection.make_func_widget,,,,,https://pypi.org/project/napari-pointslayer-projection,https://github.com/gatoniel/napari-pointslayer-projection, -285,Differentiable Potential Field Navigation,0.1.1,,,napari-potential-field-navigation,Robin CREMESE,robin.cremese@gmail.com,MPL-2.0,,A simple plugin for trajectories visualisations in napari for lung navigation in CTs scans,>=3.8,"['napari', 'numpy', 'magicgui', 'qtpy', 'scikit-image', 'napari-itk-io', 'taichi', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-potential-field-navigation +297,Differentiable Potential Field Navigation,0.1.1,,,napari-potential-field-navigation,Robin CREMESE,robin.cremese@gmail.com,MPL-2.0,,A simple plugin for trajectories visualisations in napari for lung navigation in CTs scans,>=3.8,"['napari', 'numpy', 'magicgui', 'qtpy', 'scikit-image', 'napari-itk-io', 'taichi', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-potential-field-navigation [![License Mozilla Public License 2.0](https://img.shields.io/pypi/l/napari-potential-field-navigation.svg?color=green)](https://github.com/rcremese/napari-potential-field-navigation/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-potential-field-navigation.svg?color=green)](https://pypi.org/project/napari-potential-field-navigation) @@ -28309,7 +29340,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Mozilla Public License 2.0 (MPL 2.0)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/rcremese/napari-potential-field-navigation/issues', 'Documentation, https://github.com/rcremese/napari-potential-field-navigation#README.md', 'Source Code, https://github.com/rcremese/napari-potential-field-navigation', 'User Support, https://github.com/rcremese/napari-potential-field-navigation/issues']",napari-potential-field-navigation.get_reader,napari-potential-field-navigation.write_multiple,napari-potential-field-navigation.make_diff_apf_widget,napari-potential-field-navigation.make_sample_data,['*.npy'],,['.npy'],https://pypi.org/project/napari-potential-field-navigation,, -286,Power Spectrum,0.0.6,2022-06-16,2023-06-18,napari-power-spectrum,Giorgia Tortora,giorgiatortora2@gmail.com,BSD-3-Clause,https://github.com/GiorgiaTortora/napari-power-spectrum,A simple plugin to get the power spectrum of frames of a stack image,>=3.8,"['numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-power-spectrum +298,Power Spectrum,0.0.6,2022-06-16,2023-06-18,napari-power-spectrum,Giorgia Tortora,giorgiatortora2@gmail.com,BSD-3-Clause,https://github.com/GiorgiaTortora/napari-power-spectrum,A simple plugin to get the power spectrum of frames of a stack image,>=3.8,"['numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-power-spectrum [![License](https://img.shields.io/pypi/l/napari-power-spectrum.svg?color=green)](https://github.com/GiorgiaTortora/napari-power-spectrum/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-power-spectrum.svg?color=green)](https://pypi.org/project/napari-power-spectrum) @@ -28379,7 +29410,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/GiorgiaTortora/napari-power-spectrum/issues', 'Documentation, https://github.com/GiorgiaTortora/napari-power-spectrum#README.md', 'Source Code, https://github.com/GiorgiaTortora/napari-power-spectrum', 'User Support, https://github.com/GiorgiaTortora/napari-power-spectrum/issues']",,,napari-power-spectrum.make_powerspectrum_widget,,,,,https://pypi.org/project/napari-power-spectrum,https://github.com/GiorgiaTortora/napari-power-spectrum, -287,napari-power-widgets,0.0.1,2022-11-27,2023-06-18,napari-power-widgets,Hanjin Liu,liuhanjin-sc@g.ecc.u-tokyo.ac.jp,BSD-3-Clause,https://github.com/hanjinliu/napari-power-widgets,Powerful widgets and type annotations for napari plugin widgets,>=3.8,"['numpy', 'pandas', 'typing-extensions', 'magicgui', 'napari', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-power-widgets +299,napari-power-widgets,0.0.1,2022-11-27,2023-06-18,napari-power-widgets,Hanjin Liu,liuhanjin-sc@g.ecc.u-tokyo.ac.jp,BSD-3-Clause,https://github.com/hanjinliu/napari-power-widgets,Powerful widgets and type annotations for napari plugin widgets,>=3.8,"['numpy', 'pandas', 'typing-extensions', 'magicgui', 'napari', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-power-widgets [![License BSD-3](https://img.shields.io/pypi/l/napari-power-widgets.svg?color=green)](https://github.com/hanjinliu/napari-power-widgets/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-power-widgets.svg?color=green)](https://pypi.org/project/napari-power-widgets) @@ -28531,7 +29562,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/hanjinliu/napari-power-widgets/issues', 'Documentation, https://github.com/hanjinliu/napari-power-widgets#README.md', 'Source Code, https://github.com/hanjinliu/napari-power-widgets', 'User Support, https://github.com/hanjinliu/napari-power-widgets/issues']",,,,,,,,https://pypi.org/project/napari-power-widgets,https://github.com/hanjinliu/napari-power-widgets, -288,napari PRAM,0.1.3,2022-07-06,2023-06-18,napari-pram,Hieu Hoang,hthieu@illinois.edu,MIT,https://pypi.org/project/napari-pram/,plugin for PRAM data annotation and processing,>=3.7,"['numpy', 'magicgui', 'qtpy', 'opencv-python', 'scipy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-pram +300,napari PRAM,0.1.3,2022-07-06,2023-06-18,napari-pram,Hieu Hoang,hthieu@illinois.edu,MIT,https://pypi.org/project/napari-pram/,plugin for PRAM data annotation and processing,>=3.7,"['numpy', 'magicgui', 'qtpy', 'opencv-python', 'scipy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-pram [![License](https://img.shields.io/pypi/l/napari-pram.svg?color=green)](https://github.com/hthieu166/napari-pram/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-pram.svg?color=green)](https://pypi.org/project/napari-pram) @@ -28642,7 +29673,116 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']",,napari-pram.get_img_reader,napari-pram.write_multiple,napari-pram.open_panel,napari-pram.make_sample_data,['*.png'],,['.npy'],https://pypi.org/project/napari-pram/,, -289,napari-process-points-and-surfaces,0.5.0,2023-04-13,2023-06-18,napari-process-points-and-surfaces,"Robert Haase, Johannes Soltwedel",robert.haase@tu-dresden.de,BSD-3-Clause,https://github.com/haesleinhuepf/napari-process-points-and-surfaces,Process and analyze surfaces using open3d and vedo in napari,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari', 'napari-tools-menu (>=0.1.14)', 'napari-time-slicer (>=0.4.5)', 'napari-workflows (>=0.2.3)', 'vedo (>=2022.4.1)', 'napari-skimage-regionprops (>=0.5.5)', 'pandas', 'imageio (!=2.22.1)', 'stackview (>=0.5.2)']","# napari-process-points-and-surfaces (nppas) +301,napari prism,0.1.3,,,napari-prism,Rafael Tubelleza,rafaelrtubelleza@gmail.com,MIT,,A Python package for the inteRactive and Integrated analySis of Multiplexed tissue microarrays,>=3.10,"['numpy', 'magicgui', 'qtpy', 'scikit-image', 'spatialdata', 'imagecodecs', 'napari[all]==0.4.19.post1', 'napari-matplotlib<2.0.2', 'napari-spatialdata', 'matplotlib', 'PyComplexHeatmap', 'scikit-learn', 'cellpose>=3.0.10', 'scanpy>=1.10.0', 'phenograph', 'squidpy', 'kneed', 'ipykernel; extra == ""docs""', 'ipython; extra == ""docs""', 'myst-nb>=1.1; extra == ""docs""', 'myst-parser; extra == ""docs""', 'sphinx>=4; extra == ""docs""', 'sphinx-autodoc-typehints; extra == ""docs""', 'sphinx-book-theme>=1; extra == ""docs""', 'sphinx-copybutton; extra == ""docs""', 'sphinx-qt-documentation; extra == ""docs""', 'sphinxcontrib-bibtex>=1; extra == ""docs""', 'sphinx-tabs; extra == ""docs""', 'sphinxext-opengraph; extra == ""docs""', 'dask-cudf-cu12==24.10.*; extra == ""gpu""', 'rapids-singlecell[rapids12]; extra == ""gpu""', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-lazy-fixtures; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'qtpy; extra == ""testing""']","# PRISM: A **P**ython package for the inte**R**active and **I**ntegrated analy**S**is of **M**ultiplexed tissue microarrays + + + +[![License MIT](https://img.shields.io/pypi/l/napari-prism.svg?color=green)](https://github.com/clinicalomx/napari-prism/raw/main/LICENSE) +[![PyPI](https://img.shields.io/pypi/v/napari-prism.svg?color=green)](https://pypi.org/project/napari-prism) +[![Python Version](https://img.shields.io/pypi/pyversions/napari-prism.svg?color=green)](https://python.org) +[![tests](https://github.com/clinicalomx/napari-prism/workflows/tests/badge.svg)](https://github.com/clinicalomx/napari-prism/actions) +[![codecov](https://codecov.io/gh/clinicalomx/napari-prism/branch/main/graph/badge.svg)](https://codecov.io/gh/clinicalomx/napari-prism) +[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-prism)](https://napari-hub.org/plugins/napari-prism) + +**NOTE: PRISM is still in heavy development.** +PRISM or napari-prism is a package and [napari] plugin designed for interactive processing, analysing and visualising multiplxed tissue microarrays. + +Currently, end-to-end capabilities (i.e. starting from importing the raw image file, to basic spatial analysis of annotated cells) are available for images generated from the +Akoya Phenocycler™-Fusion platform. However, the modular structure of the +package allows for usage at any stage of processing and/or analysis, given a pre-built SpatialData object using readers from either +[spatialdata-io] or [sopa]. + +PRISM uses [spatialdata] as the core data framework, allowing for: + +1. The rich integration of tools from the ([scverse]) Python bioinformatics ecosystem with highly interactive graphical user interfaces from [napari] and [napari-spatialdata]. +2. The storage of images, shapes, annotations and their linked `AnnData` objects in a standardized, FAIR-compliant data structure, addressing the non-standard and fragmented organization of files before, during, and after a multiplexed image analysis pipeline. + +The package was designed to be used completely within the [napari] application and therefore require little to no knowledge of Python programming. Therefore, documentation for usage via the API is currently in progress. + +## Installation: CPU only + +Install this package via [pip]: + +```bash +pip install napari-prism +``` + +Install the latest development version: + +```bash +pip install git+https://github.com/clinicalomx/napari-prism.git@main +``` + +## Installation: GPU-accelerated + +### General computations with RAPIDS and rapids-singlecell + +General larger scale and/or computationally demanding functions can be accelerated with the [NVIDIA RAPIDS suite](https://rapids.ai/). We utilise some packages from this suite, as well as the GPU-accelerated implementation of scanpy with [rapids-singlecell]. + +1. [Check and configure the system requirements from RAPIDS](https://docs.rapids.ai/install/#system-req). + - Currently, only Linux distributions (or Windows systems with WSL2) are supported. + - Install the [CUDA12.2](https://developer.nvidia.com/cuda-12-2-2-download-archive) or [CUDA12.5](https://developer.nvidia.com/cuda-12-5-1-download-archive) toolkit. +2. Install the package together with [RAPIDS] and [rapids-singlecell] via [pip]: + +```bash +pip install napari-prism[gpu] --extra-index-url=https://pypi.nvidia.com +``` + +### Cell segmentation with Cellpose + +To run [cellpose] on the GPU, install the [CUDA version of PyTorch](https://pytorch.org/get-started/locally/). You may need to [remove any installed CPU versions of PyTorch](https://github.com/MouseLand/cellpose?tab=readme-ov-file#gpu-version-cuda-on-windows-or-linux). + +## Getting Started + +To start using `napari-prism`, please see the [tutorials](https://napari-prism.readthedocs.io/en/latest/notebooks/getting_started.html#): + +- [Getting started](https://napari-prism.readthedocs.io/en/latest/notebooks/getting_started.html) +- To learn how to interactively analyse raw .qptiff TMAs, see [TMA Image Analysis](https://napari-prism.readthedocs.io/en/latest/notebooks/tma_usage.html) +- To learn how to interactively analyse AnnData-contained SpatialData objects, see [Anndata Analysis](https://napari-prism.readthedocs.io/en/latest/notebooks/adata_usage.html) + +## Contributing + +Contributions are very welcome. Tests can be run with [tox], please ensure +the coverage at least stays the same before you submit a pull request. + +## License + +Distributed under the terms of the [MIT] license, +""napari-prism"" is free and open source software + +## Issues + +If you encounter any problems, please [file an issue] along with a detailed description. + +## Citation + +\*\*tba + +[napari]: https://github.com/napari/napari +[@napari]: https://github.com/napari +[MIT]: http://opensource.org/licenses/MIT +[BSD-3]: http://opensource.org/licenses/BSD-3-Clause +[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt +[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt +[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0 +[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt +[file an issue]: https://github.com/clinicalomx/napari-prism/issues +[tox]: https://tox.readthedocs.io/en/latest/ +[pip]: https://pypi.org/project/pip/ +[PyPI]: https://pypi.org/ +[PyTorch]: https://pytorch.org/ +[cellpose]: https://github.com/MouseLand/cellpose +[RAPIDS]: https://rapids.ai/ +[rapids-singlecell]: https://github.com/scverse/rapids_singlecell +[spatialdata]: https://github.com/scverse/spatialdata/tree/main +[napari-spatialdata]: https://github.com/scverse/napari-spatialdata/tree/main +[spatialdata-io]: https://github.com/scverse/spatialdata-io +[sopa]: https://github.com/gustaveroussy/sopa +[scverse]: https://scverse.org/ +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/clinicalomx/napari-prism/issues', 'Documentation, https://github.com/clinicalomx/napari-prism#README.md', 'Source Code, https://github.com/clinicalomx/napari-prism', 'User Support, https://github.com/clinicalomx/napari-prism/issues']",napari-prism.get_reader,,napari-prism.TMAImageAnalysis,,"['*.qptiff', '*.zarr']",,,https://pypi.org/project/napari-prism,, +302,napari-process-points-and-surfaces,0.5.0,2023-04-13,2023-06-18,napari-process-points-and-surfaces,"Robert Haase, Johannes Soltwedel",robert.haase@tu-dresden.de,BSD-3-Clause,https://github.com/haesleinhuepf/napari-process-points-and-surfaces,Process and analyze surfaces using open3d and vedo in napari,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari', 'napari-tools-menu (>=0.1.14)', 'napari-time-slicer (>=0.4.5)', 'napari-workflows (>=0.2.3)', 'vedo (>=2022.4.1)', 'napari-skimage-regionprops (>=0.5.5)', 'pandas', 'imageio (!=2.22.1)', 'stackview (>=0.5.2)']","# napari-process-points-and-surfaces (nppas) [![License](https://img.shields.io/pypi/l/napari-process-points-and-surfaces.svg?color=green)](https://github.com/haesleinhuepf/napari-process-points-and-surfaces/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-process-points-and-surfaces.svg?color=green)](https://pypi.org/project/napari-process-points-and-surfaces) @@ -28773,7 +29913,7 @@ If you encounter any problems, please create a thread on [image.sc] along with a [image.sc]: https://image.sc [@haesleinhuepf]: https://twitter.com/haesleinhuepf ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/haesleinhuepf/napari-process-points-and-surfaces/issues', 'Documentation, https://github.com/haesleinhuepf/napari-process-points-and-surfaces#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-process-points-and-surfaces', 'User Support, https://github.com/haesleinhuepf/napari-process-points-and-surfaces/issues']",,,napari-process-points-and-surfaces.SurfaceAnnotationWidget,napari-process-points-and-surfaces._vedo_stanford_bunny_layerdatatuple,,,,https://pypi.org/project/napari-process-points-and-surfaces,https://github.com/haesleinhuepf/napari-process-points-and-surfaces, -290,napari proofread brainbow,0.3.0,2023-04-11,2023-06-18,napari-proofread-brainbow,Seongbin Lim,seongbin.lim@polytechnique.edu,MIT,https://pypi.org/project/napari-proofread-brainbow/,proofreading Brainbow images with napari,>=3.8,"['numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""pytest-xvfb ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""qtpy ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-proofread-brainbow +303,napari proofread brainbow,0.3.0,2023-04-11,2023-06-18,napari-proofread-brainbow,Seongbin Lim,seongbin.lim@polytechnique.edu,MIT,https://pypi.org/project/napari-proofread-brainbow/,proofreading Brainbow images with napari,>=3.8,"['numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""pytest-xvfb ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""qtpy ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-proofread-brainbow [![License](https://img.shields.io/pypi/l/napari-proofread-brainbow.svg?color=green)](https://github.com/sbinnee/napari-proofread-brainbow/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-proofread-brainbow.svg?color=green)](https://pypi.org/project/napari-proofread-brainbow) @@ -28835,7 +29975,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']",,,,napari-proofread-brainbow.make_qwidget,,,,,https://pypi.org/project/napari-proofread-brainbow/,, -291,napari-properties-plotter,0.2.2,2022-01-28,2023-06-18,napari-properties-plotter,Lorenzo Gaifas,lorenzo.gaifas@gmail.com,BSD-3,https://github.com/brisvag/napari-properties-plotter,A napari plugin that automatically generates interactive plots based on layer properties.,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'pandas', 'pyqtgraph', 'qtpy']","# napari-properties-plotter +304,napari-properties-plotter,0.2.2,2022-01-28,2023-06-18,napari-properties-plotter,Lorenzo Gaifas,lorenzo.gaifas@gmail.com,BSD-3,https://github.com/brisvag/napari-properties-plotter,A napari plugin that automatically generates interactive plots based on layer properties.,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'pandas', 'pyqtgraph', 'qtpy']","# napari-properties-plotter [![License](https://img.shields.io/pypi/l/napari-properties-plotter.svg?color=green)](https://github.com/brisvag/napari-properties-plotter/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-properties-plotter.svg?color=green)](https://pypi.org/project/napari-properties-plotter) @@ -28895,7 +30035,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/brisvag/napari-properties-plotter/issues', 'Documentation, https://github.com/brisvag/napari-properties-plotter#README.md', 'Source Code, https://github.com/brisvag/napari-properties-plotter', 'User Support, https://github.com/brisvag/napari-properties-plotter/issues']",,,napari-properties-plotter.PropertyPlotter,,,,,https://pypi.org/project/napari-properties-plotter,https://github.com/brisvag/napari-properties-plotter, -292,napari-properties-viewer,0.0.2,2022-02-10,2023-06-18,napari-properties-viewer,Kevin Yamauchi,kevin.yamauchi@gmail.com,BSD-3,https://github.com/kevinyamauchi/napari-properties-viewer,A viewer for napari layer properties,>=3.6,"['napari-plugin-engine (>=0.1.4)', 'numpy']","# napari-properties-viewer +305,napari-properties-viewer,0.0.2,2022-02-10,2023-06-18,napari-properties-viewer,Kevin Yamauchi,kevin.yamauchi@gmail.com,BSD-3,https://github.com/kevinyamauchi/napari-properties-viewer,A viewer for napari layer properties,>=3.6,"['napari-plugin-engine (>=0.1.4)', 'numpy']","# napari-properties-viewer [![License](https://img.shields.io/pypi/l/napari-properties-viewer.svg?color=green)](https://github.com/napari/napari-properties-viewer/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-properties-viewer.svg?color=green)](https://pypi.org/project/napari-properties-viewer) @@ -28962,7 +30102,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']",,,,napari-properties-viewer.QtPropertiesTable,,,,,https://pypi.org/project/napari-properties-viewer,https://github.com/kevinyamauchi/napari-properties-viewer, -293,PSF simulator,0.3.1,2022-07-07,2023-11-07,napari-psf-simulator,Andrea Bassi,andrea1.bassi@polimi.it,BSD-3-Clause,https://github.com/andreabassi78/napari-psf-simulator,"A plugin for simulations of the Point Spread Function, with aberrations",>=3.8,"['numpy', 'magicgui', 'qtpy', 'PyCustomFocus >=3.3.6', 'matplotlib', 'scikit-image', 'scipy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""qtpy ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""PyCustomFocus >=3.3.6 ; extra == 'testing'"", ""matplotlib ; extra == 'testing'"", ""scikit-image ; extra == 'testing'"", ""scipy ; extra == 'testing'""]","# napari-psf-simulator +306,PSF simulator,0.3.1,2022-07-07,2023-11-07,napari-psf-simulator,Andrea Bassi,andrea1.bassi@polimi.it,BSD-3-Clause,https://github.com/andreabassi78/napari-psf-simulator,"A plugin for simulations of the Point Spread Function, with aberrations",>=3.8,"['numpy', 'magicgui', 'qtpy', 'PyCustomFocus >=3.3.6', 'matplotlib', 'scikit-image', 'scipy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""qtpy ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""PyCustomFocus >=3.3.6 ; extra == 'testing'"", ""matplotlib ; extra == 'testing'"", ""scikit-image ; extra == 'testing'"", ""scipy ; extra == 'testing'""]","# napari-psf-simulator [![License](https://img.shields.io/pypi/l/napari-psf-simulator.svg?color=green)](https://github.com/andreabassi78/napari-psf-simulator/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-psf-simulator.svg?color=green)](https://pypi.org/project/napari-psf-simulator) @@ -29073,7 +30213,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [here]: https://github.com/andreabassi78/napari-psf-simulator/raw/main/docs/pyfocus_seminar.pptx ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/andreabassi78/napari-psf-simulator/issues', 'Documentation, https://github.com/andreabassi78/napari-psf-simulator#README.md', 'Source Code, https://github.com/andreabassi78/napari-psf-simulator', 'User Support, https://github.com/andreabassi78/napari-psf-simulator/issues']",,,napari-psf-simulator.make_widget,,,,,https://pypi.org/project/napari-psf-simulator,https://github.com/andreabassi78/napari-psf-simulator, -294,napari PSSR,0.1,2023-04-18,2023-06-18,napari-pssr,William Patton,will.hunter.patton@gmail.com,MIT,https://github.com/pattonw/napari-pssr,A plugin for training and applying pssr,>=3.7,"['numpy', 'zarr', 'magicgui', 'bioimageio.core', 'gunpowder', 'matplotlib', 'torch', 'napari']","# napari-pssr +307,napari PSSR,0.1,2023-04-18,2023-06-18,napari-pssr,William Patton,will.hunter.patton@gmail.com,MIT,https://github.com/pattonw/napari-pssr,A plugin for training and applying pssr,>=3.7,"['numpy', 'zarr', 'magicgui', 'bioimageio.core', 'gunpowder', 'matplotlib', 'torch', 'napari']","# napari-pssr [![License](https://img.shields.io/pypi/l/napari-pssr.svg?color=green)](https://github.com/pattonw/napari-pssr/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-pssr.svg?color=green)](https://pypi.org/project/napari-pssr) @@ -29155,196 +30295,75 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['Bug Tracker, https://github.com/pattonw/napari-pssr/issues', 'Documentation, https://github.com/pattonw/napari-pssr#README.md', 'Source Code, https://github.com/pattonw/napari-pssr', 'User Support, https://github.com/pattonw/napari-pssr/issues']",,,napari-pssr.make_pssr_widget,napari-pssr.lr_em,,,,https://pypi.org/project/napari-pssr,https://github.com/pattonw/napari-pssr, -295,napari-pyclesperanto-assistant,0.22.1,2022-04-01,2023-06-18,napari-pyclesperanto-assistant,"Robert Haase, Talley Lambert",robert.haase@tu-dresden.de,BSD-3-Clause,https://github.com/clesperanto/napari_pyclesperanto_assistant,GPU-accelerated image processing in napari using OpenCL,>=3.6,"['napari-plugin-engine (>=0.1.4)', 'pyopencl', 'toolz', 'scikit-image', 'napari (>=0.4.15)', 'pyclesperanto-prototype (>=0.22.0)', 'magicgui', 'numpy (!=1.19.4)', 'pyperclip', 'loguru', 'jupytext', 'jupyter', 'pandas', 'napari-tools-menu (>=0.1.8)', 'napari-time-slicer (>=0.4.0)', 'napari-skimage-regionprops (>=0.2.0)', 'napari-workflows (>=0.1.1)', 'napari-assistant (>=0.2.0)']","# napari-pyclesperanto-assistant -[![Image.sc forum](https://img.shields.io/badge/dynamic/json.svg?label=forum&url=https%3A%2F%2Fforum.image.sc%2Ftag%2Fclesperanto.json&query=%24.topic_list.tags.0.topic_count&colorB=brightgreen&suffix=%20topics&logo=data:image/png;base64,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)](https://forum.image.sc/tag/clesperanto) -[![website](https://img.shields.io/website?url=http%3A%2F%2Fclesperanto.net)](http://clesperanto.net) -[![License](https://img.shields.io/pypi/l/napari-pyclesperanto-assistant.svg?color=green)](https://github.com/clesperanto/napari-pyclesperanto-assistant/raw/master/LICENSE) -[![PyPI](https://img.shields.io/pypi/v/napari-pyclesperanto-assistant.svg?color=green)](https://pypi.org/project/napari-pyclesperanto-assistant) -[![Python Version](https://img.shields.io/pypi/pyversions/napari-pyclesperanto-assistant.svg?color=green)](https://python.org) -[![tests](https://github.com/clesperanto/napari_pyclesperanto_assistant/workflows/tests/badge.svg)](https://github.com/clesperanto/napari_pyclesperanto_assistant/actions) -[![codecov](https://codecov.io/gh/clesperanto/napari_pyclesperanto_assistant/branch/master/graph/badge.svg)](https://codecov.io/gh/clesperanto/napari_pyclesperanto_assistant) -[![Development Status](https://img.shields.io/pypi/status/napari_pyclesperanto_assistant.svg)](https://en.wikipedia.org/wiki/Software_release_life_cycle#Alpha) -[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-pyclesperanto-assistant)](https://napari-hub.org/plugins/napari-pyclesperanto-assistant) -[![DOI](https://zenodo.org/badge/322312181.svg)](https://zenodo.org/badge/latestdoi/322312181) - -The py-clEsperanto-assistant is a yet experimental [napari](https://github.com/napari/napari) plugin for building GPU-accelerated image processing workflows. -It is part of the [clEsperanto](http://clesperanto.net) project and thus, aims at removing programming language related barriers between image processing ecosystems in the life sciences. -It uses [pyclesperanto](https://github.com/clEsperanto/pyclesperanto_prototype) and with that [pyopencl](https://documen.tician.de/pyopencl/) as backend for processing images. - -This napari plugin adds some menu entries to the Tools menu. You can recognize them with their suffix `(clEsperanto)` in brackets. -Furthermore, it can be used from the [napari-assistant](https://www.napari-hub.org/plugins/napari-assistant) graphical user interface. -Therefore, just click the menu `Tools > Utilities > Assistant (na)` or run `naparia` from the command line. - -![](https://github.com/clEsperanto/napari_pyclesperanto_assistant/raw/master/docs/images/virtual_4d_support1.gif) - -## Usage - -### Start up the assistant -Start up napari, e.g. from the command line: -``` -napari -``` - -Load example data, e.g. from the menu `File > Open Samples > clEsperanto > CalibZAPWfixed` and -start the assistant from the menu `Tools > Utilities > Assistant (na)`. - -![](https://github.com/clEsperanto/napari_pyclesperanto_assistant/raw/master/docs/images/screenshot1.png) - -In case of two dimensional timelapse data, an initial conversion step might be necessary depending on your data source. -Click the menu `Tools > Utilities > Convert to 2d timelapse`. In the dialog, select the dataset and click ok. -You can delete the original dataset afterwards: - -![](https://github.com/clEsperanto/napari_pyclesperanto_assistant/raw/master/docs/images/screenshot1a.png) - -### Set up a workflow - -Choose categories of operations in the top right panel, for example start with denoising using a Gaussian Blur with sigma 1 in x and y. - -![](https://github.com/clEsperanto/napari_pyclesperanto_assistant/raw/master/docs/images/screenshot2.png) +308,pyav video plugin,0.0.8,,,napari-pyav,jlab.berlin,yourname@example.com,MIT,,Napari plugin for reading videos using PyAV,>=3.9,"['numpy', 'av', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""']","# napari-pyav -Continue with background removal using the top-hat filter with radius 5 in x and y. +[![License MIT](https://img.shields.io/pypi/l/napari-pyav.svg?color=green)](https://github.com/danionella/napari-pyav/raw/main/LICENSE) +[![PyPI](https://img.shields.io/pypi/v/napari-pyav.svg?color=green)](https://pypi.org/project/napari-pyav) +[![Python Version](https://img.shields.io/pypi/pyversions/napari-pyav.svg?color=green)](https://python.org) +[![tests](https://github.com/danionella/napari-pyav/workflows/tests/badge.svg)](https://github.com/danionella/napari-pyav/actions) +[![codecov](https://codecov.io/gh/danionella/napari-pyav/branch/main/graph/badge.svg)](https://codecov.io/gh/danionella/napari-pyav) +[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-pyav)](https://napari-hub.org/plugins/napari-pyav) -![](https://github.com/clEsperanto/napari_pyclesperanto_assistant/raw/master/docs/images/screenshot2a.png) +Napari plugin for reading videos using [PyAV](https://github.com/PyAV-Org/PyAV). Inspired by the [napari-video](https://github.com/janclemenslab/napari-video) project, which served us very well for many years. For some long videos, however, its dependency on opencv caused seek glitches, so we implemented this alternative plugin based on PyAV. -For labeling the objects, use [Voronoi-Otsu-Labeling](https://nbviewer.jupyter.org/github/clEsperanto/pyclesperanto_prototype/blob/master/demo/segmentation/voronoi_otsu_labeling.ipynb) with both sigma parameters set to 2. - -![](https://github.com/clEsperanto/napari_pyclesperanto_assistant/raw/master/docs/images/screenshot2b.png) - -The labeled objects can be extended using a Voronoi diagram to derive a estimations of cell boundaries. - -![](https://github.com/clEsperanto/napari_pyclesperanto_assistant/raw/master/docs/images/screenshot2c.png) - -You can then configure napari to show the label boundaries on top of the original image: +---------------------------------- -![](https://github.com/clEsperanto/napari_pyclesperanto_assistant/raw/master/docs/images/screenshot2d.png) +This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template. -When your workflow is set up, click the play button below your dataset: + -### Neighbor statistics +## Installation -When working with 2D or 3D data you can analyze measurements in relationship with their neighbors. -For example, you can measure the area of blobs as shown in the example shown below using the menu -`Tools > Measurements > Statistics of labeled pixels (clesperant)` and visualize it as `area` image by double-clicking on the table column (1). -Additionally, you can measure the maximum area of the 6 nearest neighbors using the menu `Tools > Measurments > Neighborhood statistics of measurements`. -The new column will then be called ""max_nn6_area..."" (2). When visualizing such parametric images next by each other, it is recommended to use -[napari-brightness-contrast](https://www.napari-hub.org/plugins/napari-brightness-contrast) and visualize the same intensity range to see differences correctly. +You can install `napari-pyav` via [pip]: -![](https://github.com/clEsperanto/napari_pyclesperanto_assistant/raw/master/docs/images/neighbor_statistics.png) + pip install napari-pyav -### Code generation -You can also export your workflow as Python/Jython code or as notebook. See the [napari-assistant documentation](https://www.napari-hub.org/plugins/napari-assistant) for details. -## Features -[pyclesperanto](https://github.com/clEsperanto/pyclesperanto_prototype) offers various possibilities for processing images. It comes from developers who work in life sciences and thus, it may be focused towards processing two- and three-dimensional microscopy image data showing cells and tissues. A selection of pyclesperanto's functionality is available via the assistant user interface. Typical workflows which can be built with this assistant include -* image filtering - * denoising / noise reduction (mean, median, Gaussian blur) - * background subtraction for uneven illumination or out-of-focus light (bottom-hat, top-hat, subtract Gaussian background) - * grey value morphology (local minimum, maximum. variance) - * gamma correction - * Laplace operator - * Sobel operator -* combining images - * masking - * image math (adding, subtracting, multiplying, dividing images) - * absolute / squared difference -* image transformations - * translation - * rotation - * scale - * reduce stack - * sub-stacks -* image projections - * minimum / mean / maximum / sum / standard deviation projections -* image segmentation - * binarization (thresholding, local maxima detection) - * labeling - * regionalization - * instance segmentation - * semantic segmentation - * detect label edges - * label spots - * connected component labeling - * Voronoi-Otsu-labeling -* post-processing of binary images - * dilation - * erosion - * binary opening - * binary closing - * binary and / or / xor -* post-processing of label images - * dilation (expansion) of labels - * extend labels via Voronoi - * exclude labels on edges - * exclude labels within / out of size / value range - * merge touching labels -* parametric maps - * proximal / touching neighbor count - * distance measurements to touching / proximal / n-nearest neighbors - * pixel count map - * mean / maximum / extension ratio map -* label measurements / post processing of parametric maps - * minimum / mean / maximum / standard deviation intensity maps - * minimum / mean / maximum / standard deviation of touching / n-nearest / neighbors -* neighbor meshes - * touching neighbors - * n-nearest neighbors - * proximal neighbors - * distance meshes -* measurements based on label images - * bounding box 2D / 3D - * minimum / mean / maximum / sum / standard deviation intensity - * center of mass - * centroid - * mean / maximum distance to centroid (and extension ratio shape descriptor) - * mean / maximum distance to center of mass (and extension ratio shape descriptor) - * statistics of neighbors (See related [publication](https://www.frontiersin.org/articles/10.3389/fcomp.2021.774396/full)) -* code export - * python / Fiji-compatible jython - * python jupyter notebooks -* pyclesperanto scripting - * cell segmentation - * cell counting - * cell differentiation - * tissue classification -## Installation +To install latest development version : -It is recommended to install the assistant using conda. If you have never used conda before, it is recommended to read -[this blog post](https://biapol.github.io/blog/johannes_mueller/anaconda_getting_started/) first. + pip install git+https://github.com/danionella/napari-pyav.git -```shell -conda create --name cle_39 python=3.9 napari-pyclesperanto-assistant -conda activate cle_39 -``` -Mac-users please also install this: +## Contributing - conda install -c conda-forge ocl_icd_wrapper_apple - -Linux users please also install this: - - conda install -c conda-forge ocl-icd-system +Contributions are very welcome. Tests can be run with [tox], please ensure +the coverage at least stays the same before you submit a pull request. -You can then start the napari-assistant using this command: +## License -``` -naparia -``` +Distributed under the terms of the [MIT] license, +""napari-pyav"" is free and open source software +## Issues -## Feedback and contributions welcome! -clEsperanto is developed in the open because we believe in the open source community. See our [community guidelines](https://clij.github.io/clij2-docs/community_guidelines). Feel free to drop feedback as [github issue](https://github.com/clEsperanto/pyclesperanto_prototype/issues) or via [image.sc](https://image.sc) +If you encounter any problems, please [file an issue] along with a detailed description. -## Acknowledgements -This project was supported by the Deutsche Forschungsgemeinschaft under Germany’s Excellence Strategy – EXC2068 - Cluster of Excellence ""Physics of Life"" of TU Dresden. -This project has been made possible in part by grant number [2021-240341 (Napari plugin accelerator grant)](https://chanzuckerberg.com/science/programs-resources/imaging/napari/improving-image-processing/) from the Chan Zuckerberg Initiative DAF, an advised fund of the Silicon Valley Community Foundation. +[napari]: https://github.com/napari/napari +[Cookiecutter]: https://github.com/audreyr/cookiecutter +[@napari]: https://github.com/napari +[MIT]: http://opensource.org/licenses/MIT +[BSD-3]: http://opensource.org/licenses/BSD-3-Clause +[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt +[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt +[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0 +[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt +[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin -[Imprint](https://clesperanto.github.io/imprint) +[file an issue]: https://github.com/danionella/napari-pyav/issues -","['Programming Language :: Python :: 3', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Framework :: napari', 'Intended Audience :: Science/Research', 'Development Status :: 3 - Alpha']","['Bug Tracker, https://github.com/clEsperanto/napari_pyclesperanto_assistant/issues', 'Documentation, https://github.com/clEsperanto/napari_pyclesperanto_assistant/', 'Source Code, https://github.com/clEsperanto/napari_pyclesperanto_assistant', 'User Support, https://forum.image.sc/tag/clij']",,,napari-pyclesperanto-assistant.Assistant,napari-pyclesperanto-assistant._load_Lund,,,,https://pypi.org/project/napari-pyclesperanto-assistant,https://github.com/clesperanto/napari_pyclesperanto_assistant, -296,napari pymeshlab,0.0.6,,,napari-pymeshlab,"Zach Marin, Robert Haase",zach.marin@yale.edu,MIT,,"Interfaces between napari and pymeshlab library to allow import, export and construction of surfaces.",>=3.8,"['napari', 'npe2', 'numpy', 'pymeshlab']","# napari-pymeshlab +[napari]: https://github.com/napari/napari +[tox]: https://tox.readthedocs.io/en/latest/ +[pip]: https://pypi.org/project/pip/ +[PyPI]: https://pypi.org/ +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['Homepage, https://github.com/danionella/napari-pyav', 'Bug Tracker, https://github.com/danionella/napari-pyav/issues', 'Documentation, https://github.com/danionella/napari-pyav#README.md', 'Source Code, https://github.com/danionella/napari-pyav', 'User Support, https://github.com/danionella/napari-pyav/issues']",napari-pyav.get_reader,,,,['*.mp4'],,,https://pypi.org/project/napari-pyav,, +309,napari pymeshlab,0.0.6,,,napari-pymeshlab,"Zach Marin, Robert Haase",zach.marin@yale.edu,MIT,,"Interfaces between napari and pymeshlab library to allow import, export and construction of surfaces.",>=3.8,"['napari', 'npe2', 'numpy', 'pymeshlab']","# napari-pymeshlab [![License](https://img.shields.io/pypi/l/napari-pymeshlab.svg?color=green)](https://github.com/zacsimile/napari-pymeshlab/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-pymeshlab.svg?color=green)](https://pypi.org/project/napari-pymeshlab) @@ -29425,7 +30444,7 @@ If you encounter any problems, please [file an issue](https://github.com/zacsimi [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']","['Bug Tracker, https://github.com/zacsimile/napari-pymeshlab/issues', 'Documentation, https://github.com/zacsimile/napari-pymeshlab#README.md', 'Source Code, https://github.com/zacsimile/napari-pymeshlab', 'User Support, https://github.com/zacsimile/napari-pymeshlab/issues']",napari-pymeshlab.get_mesh_reader,napari-pymeshlab.write_single_surface,napari-pymeshlab.screened_poisson_reconstruction,napari-pymeshlab.make_sphere,"['*.3ds', '*.apts', '*.asc', '*.bre', '*.ctm', '*.dae', '*.e57', '*.es', '*.fbx', '*.glb', '*.gltf', '*.obj', '*.off', '*.pdb', '*.ply', '*.ptx', '*.qobj', '*.stl', '*.vmi', '*.wrl', '*.x3d', '.x3dv']","['.3ds', '.apts', '.asc', '.bre', '.ctm', '.dae', '.e57', '.es', '.fbx', '.glb', '.gltf', '.obj', '.off', '.pdb', '.ply', '.ptx', '.qobj', '.stl', '.vmi', '.wrl', '.x3d', '.x3dv']",,https://pypi.org/project/napari-pymeshlab,, -297,napari pystackreg,0.1.4,2022-07-18,2023-06-18,napari-pystackreg,Gregor Lichtner,gregor.lichtner@med.uni-greifswald.de,Apache-2.0,https://github.com/glichtner/napari-pystackreg,Robust image registration for napari,>=3.8,"['magicgui', 'numpy', 'pystackreg (>=0.2.6)', 'qtpy', ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]","# napari-pystackreg +310,napari pystackreg,0.1.4,2022-07-18,2023-06-18,napari-pystackreg,Gregor Lichtner,gregor.lichtner@med.uni-greifswald.de,Apache-2.0,https://github.com/glichtner/napari-pystackreg,Robust image registration for napari,>=3.8,"['magicgui', 'numpy', 'pystackreg (>=0.2.6)', 'qtpy', ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]","# napari-pystackreg [![License](https://img.shields.io/pypi/l/napari-pystackreg.svg?color=green)](https://github.com/glichtner/napari-pystackreg/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-pystackreg.svg?color=green)](https://pypi.org/project/napari-pystackreg) @@ -29609,7 +30628,7 @@ This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookie [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 4 - Beta', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['Bug Tracker, https://github.com/glichtner/napari-pystackreg/issues', 'Documentation, https://github.com/glichtner/napari-pystackreg#README.md', 'Source Code, https://github.com/glichtner/napari-pystackreg', 'User Support, https://github.com/glichtner/napari-pystackreg/issues']",,,napari-pystackreg.pystackreg,napari-pystackreg.load_sample_data,,,,https://pypi.org/project/napari-pystackreg,https://github.com/glichtner/napari-pystackreg, -298,QR-Code,0.0.1,2023-03-30,2023-06-18,napari-qrcode,Kyle Harrington,czi@kyleharrington.com,BSD-3-Clause,https://github.com/kephale/napari-qrcode,A napari plugin to generate QR-Codes,>=3.8,"['numpy', 'magicgui', 'qtpy', 'qrcode', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-qrcode +311,QR-Code,0.0.1,2023-03-30,2023-06-18,napari-qrcode,Kyle Harrington,czi@kyleharrington.com,BSD-3-Clause,https://github.com/kephale/napari-qrcode,A napari plugin to generate QR-Codes,>=3.8,"['numpy', 'magicgui', 'qtpy', 'qrcode', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-qrcode [![License BSD-3](https://img.shields.io/pypi/l/napari-qrcode.svg?color=green)](https://github.com/kephale/napari-qrcode/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-qrcode.svg?color=green)](https://pypi.org/project/napari-qrcode) @@ -29677,7 +30696,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/kephale/napari-qrcode/issues', 'Documentation, https://github.com/kephale/napari-qrcode#README.md', 'Source Code, https://github.com/kephale/napari-qrcode', 'User Support, https://github.com/kephale/napari-qrcode/issues']",,,napari-qrcode.qrcode_widget,,,,,https://pypi.org/project/napari-qrcode,https://github.com/kephale/napari-qrcode, -299,napari Quoll,0.0.1,,,napari-quoll,Elaine Ho,Elaine.Ho@rfi.ac.uk,Apache-2.0,,Resolution estimation for electron tomography,>=3.7,"['numpy', 'magicgui', 'qtpy', 'quoll', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-quoll +312,napari Quoll,0.0.1,,,napari-quoll,Elaine Ho,Elaine.Ho@rfi.ac.uk,Apache-2.0,,Resolution estimation for electron tomography,>=3.7,"['numpy', 'magicgui', 'qtpy', 'quoll', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-quoll [![License](https://img.shields.io/badge/License-Apache_2.0-green.svg)](https://opensource.org/licenses/Apache-2.0) [![PyPI](https://img.shields.io/pypi/v/napari-quoll.svg?color=green)](https://pypi.org/project/napari-quoll) @@ -29751,7 +30770,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/rosalindfranklininstitute/napari-quoll/issues', 'Documentation, https://github.com/rosalindfranklininstitute/napari-quoll#README.md', 'Source Code, https://github.com/rosalindfranklininstitute/napari-quoll', 'User Support, https://github.com/rosalindfranklininstitute/napari-quoll/issues']",,,napari-quoll.make_quoll_widget,,,,,https://pypi.org/project/napari-quoll,, -300,Napari Select Foreground,0.0.7,2023-11-18,2024-07-11,napari-rembg,Mallory Wittwer,mallory.wittwer@epfl.ch,BSD-3-Clause,https://pypi.org/project/napari-rembg,AI-based foreground extraction in scientific and natural images.,>=3.8,"['magicgui', 'qtpy', 'napari[all] >=0.4.16', ""rembg ; extra == 'local'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","![EPFL Center for Imaging logo](https://imaging.epfl.ch/resources/logo-for-gitlab.svg) +313,Napari Select Foreground,0.0.7,2023-11-18,2024-07-11,napari-rembg,Mallory Wittwer,mallory.wittwer@epfl.ch,BSD-3-Clause,https://pypi.org/project/napari-rembg,AI-based foreground extraction in scientific and natural images.,>=3.8,"['magicgui', 'qtpy', 'napari[all] >=0.4.16', ""rembg ; extra == 'local'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","![EPFL Center for Imaging logo](https://imaging.epfl.ch/resources/logo-for-gitlab.svg) # napari-rembg Segment images using a collection of fast and lightweight generalist segmentation models in Napari. This plugin is based on the [rembg](https://github.com/danielgatis/rembg) project. @@ -29861,7 +30880,7 @@ If you encounter any problems, please file an issue along with a detailed descri This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template. ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Source Code, https://github.com/EPFL-Center-for-Imaging/napari-rembg.git']",,,napari-rembg.local,,,,,https://pypi.org/project/napari-rembg,, -301,Result stack,0.0.1,2023-04-04,2023-06-18,napari-result-stack,Hanjin Liu,liuhanjin-sc@g.ecc.u-tokyo.ac.jp,BSD-3-Clause,https://github.com/hanjinliu/napari-result-stack,Widgets and type annotations for storing function results of any types,>=3.8,"['numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-result-stack +314,Result stack,0.0.1,2023-04-04,2023-06-18,napari-result-stack,Hanjin Liu,liuhanjin-sc@g.ecc.u-tokyo.ac.jp,BSD-3-Clause,https://github.com/hanjinliu/napari-result-stack,Widgets and type annotations for storing function results of any types,>=3.8,"['numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-result-stack [![License BSD-3](https://img.shields.io/pypi/l/napari-result-stack.svg?color=green)](https://github.com/hanjinliu/napari-result-stack/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-result-stack.svg?color=green)](https://pypi.org/project/napari-result-stack) @@ -30005,7 +31024,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/hanjinliu/napari-result-stack/issues', 'Documentation, https://github.com/hanjinliu/napari-result-stack#README.md', 'Source Code, https://github.com/hanjinliu/napari-result-stack', 'User Support, https://github.com/hanjinliu/napari-result-stack/issues']",,,napari-result-stack.make_qwidget,,,,,https://pypi.org/project/napari-result-stack,https://github.com/hanjinliu/napari-result-stack, -302,Rioxarray Plugin,0.0.1,2023-04-12,2023-06-18,napari-rioxarray,Dr. Andrew Annex,ama6fy@virginia.edu,BSD-3-Clause,https://github.com/AndrewAnnex/napari-rioxarray,A rioxarray plugin for napari supporting GDAL raster datatypes,>=3.8,"['numpy', 'napari', 'rioxarray', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-rioxarray +315,Rioxarray Plugin,0.0.1,2023-04-12,2023-06-18,napari-rioxarray,Dr. Andrew Annex,ama6fy@virginia.edu,BSD-3-Clause,https://github.com/AndrewAnnex/napari-rioxarray,A rioxarray plugin for napari supporting GDAL raster datatypes,>=3.8,"['numpy', 'napari', 'rioxarray', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-rioxarray [![License BSD-3](https://img.shields.io/pypi/l/napari-rioxarray.svg?color=green)](https://github.com/AndrewAnnex/napari-rioxarray/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-rioxarray.svg?color=green)](https://pypi.org/project/napari-rioxarray) @@ -30073,7 +31092,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/AndrewAnnex/napari-rioxarray/issues', 'Documentation, https://github.com/AndrewAnnex/napari-rioxarray#README.md', 'Source Code, https://github.com/AndrewAnnex/napari-rioxarray', 'User Support, https://github.com/AndrewAnnex/napari-rioxarray/issues']",napari-rioxarray.get_reader,,,,"['*.vrt', '*.tif', '*.tiff', '*.TIF', '*.TIFF', '*.img', '*.lbl', '*.cub', '*.fits', '*.IMG', '*.LBL', '*.CUB', '*.FITS']",,,https://pypi.org/project/napari-rioxarray,https://github.com/AndrewAnnex/napari-rioxarray, -303,napari-roi,0.1.8,2022-01-31,2023-06-18,napari-roi,Jonas Windhager,jonas@windhager.io,MIT,https://github.com/BodenmillerGroup/napari-roi,Select regions of interest (ROIs) using napari,>=3.8,"['numpy', 'pandas', 'qtpy']","# napari-roi +316,napari-roi,0.1.8,2022-01-31,2023-06-18,napari-roi,Jonas Windhager,jonas@windhager.io,MIT,https://github.com/BodenmillerGroup/napari-roi,Select regions of interest (ROIs) using napari,>=3.8,"['numpy', 'pandas', 'qtpy']","# napari-roi [![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-roi)](https://napari-hub.org/plugins/napari-roi) [![PyPI](https://img.shields.io/pypi/v/napari-roi.svg?color=green)](https://pypi.org/project/napari-roi) @@ -30128,7 +31147,7 @@ Maintained by [Milad Adibi](mailto:milad.adibi@uzh.ch) from February 2023. [MIT](https://github.com/BodenmillerGroup/napari-roi/blob/main/LICENSE) ","['Framework :: napari', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'License :: OSI Approved :: MIT License']","['Bug Tracker, https://github.com/BodenmillerGroup/napari-roi/issues', 'Documentation, https://github.com/BodenmillerGroup/napari-roi#README.md', 'Source Code, https://github.com/BodenmillerGroup/napari-roi', 'User Support, https://github.com/BodenmillerGroup/napari-roi/issues']",,,napari-roi.ROIWidget,,,,,https://pypi.org/project/napari-roi,https://github.com/BodenmillerGroup/napari-roi, -304,ROI Manager,0.0.3,,,napari-roi-manager,Hanjin Liu,Hanjin Liu ,,,A ROI Manager Widget with an UI similar to ImageJ,>=3.9,"['numpy', 'qtpy', ""napari; extra == 'testing'"", ""pyqt5; extra == 'testing'"", ""pytest; extra == 'testing'"", ""pytest-cov; extra == 'testing'"", ""pytest-qt; extra == 'testing'"", ""tox; extra == 'testing'""]","# napari-roi-manager +317,ROI Manager,0.0.3,,,napari-roi-manager,Hanjin Liu,Hanjin Liu ,,,A ROI Manager Widget with an UI similar to ImageJ,>=3.9,"['numpy', 'qtpy', ""napari; extra == 'testing'"", ""pyqt5; extra == 'testing'"", ""pytest; extra == 'testing'"", ""pytest-cov; extra == 'testing'"", ""pytest-qt; extra == 'testing'"", ""tox; extra == 'testing'""]","# napari-roi-manager [![License BSD-3](https://img.shields.io/pypi/l/napari-roi-manager.svg?color=green)](https://github.com/hanjinliu/napari-roi-manager/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-roi-manager.svg?color=green)](https://pypi.org/project/napari-roi-manager) @@ -30193,7 +31212,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/hanjinliu/napari-roi-manager/issues', 'Documentation, https://github.com/hanjinliu/napari-roi-manager#README.md', 'Homepage, https://github.com/hanjinliu/napari-roi-manager', 'Source Code, https://github.com/hanjinliu/napari-roi-manager', 'User Support, https://github.com/hanjinliu/napari-roi-manager/issues']",,,napari-roi-manager.make_qwidget,,,,,https://pypi.org/project/napari-roi-manager,, -305,Roi Registration,0.1.4,2022-06-16,2023-11-07,napari-roi-registration,Andrea Bassi and Giorgia Tortora,giorgia.tortora@polimi.it,BSD-3-Clause,https://github.com/GiorgiaTortora/napari-roi-registration,A plugin to perform registration of regions-of-interests in time-lapse data.,>=3.8,"['numpy', 'magicgui', 'qtpy', 'scikit-image', 'opencv-python', 'matplotlib', 'openpyxl', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""scikit-image ; extra == 'testing'"", ""opencv-python-headless ; extra == 'testing'"", ""matplotlib ; extra == 'testing'"", ""openpyxl ; extra == 'testing'""]","# napari-roi-registration +318,Roi Registration,0.1.4,2022-06-16,2023-11-07,napari-roi-registration,Andrea Bassi and Giorgia Tortora,giorgia.tortora@polimi.it,BSD-3-Clause,https://github.com/GiorgiaTortora/napari-roi-registration,A plugin to perform registration of regions-of-interests in time-lapse data.,>=3.8,"['numpy', 'magicgui', 'qtpy', 'scikit-image', 'opencv-python', 'matplotlib', 'openpyxl', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""scikit-image ; extra == 'testing'"", ""opencv-python-headless ; extra == 'testing'"", ""matplotlib ; extra == 'testing'"", ""openpyxl ; extra == 'testing'""]","# napari-roi-registration [![License](https://img.shields.io/pypi/l/napari-roi-registration.svg?color=green)](https://github.com/GiorgiaTortora/napari-roi-registration/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-roi-registration.svg?color=green)](https://pypi.org/project/napari-roi-registration) @@ -30303,7 +31322,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/GiorgiaTortora/napari-roi-registration/issues', 'Documentation, https://github.com/GiorgiaTortora/napari-roi-registration#README.md', 'Source Code, https://github.com/GiorgiaTortora/napari-roi-registration', 'User Support, https://github.com/GiorgiaTortora/napari-roi-registration/issues']",,,napari-roi-registration.make_background_widget,,,,,https://pypi.org/project/napari-roi-registration,https://github.com/GiorgiaTortora/napari-roi-registration, -306,napari sairyscan,0.0.2,,,napari-sairyscan,Sylvain Prigent,meriadec.prigent@gmail.com,BSD-3-Clause,,Airyscan image reconstruction,>=3.8,"['numpy', 'magicgui', 'qtpy', 'sairyscan (>=0.0.2)', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-sairyscan +319,napari sairyscan,0.0.2,,,napari-sairyscan,Sylvain Prigent,meriadec.prigent@gmail.com,BSD-3-Clause,,Airyscan image reconstruction,>=3.8,"['numpy', 'magicgui', 'qtpy', 'sairyscan (>=0.0.2)', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-sairyscan [![License](https://img.shields.io/pypi/l/napari-sairyscan.svg?color=green)](https://github.com/sylvainprigent/napari-sairyscan/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-sairyscan.svg?color=green)](https://pypi.org/project/napari-sairyscan) @@ -30371,7 +31390,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/sylvainprigent/napari-sairyscan/issues', 'Documentation, https://github.com/sylvainprigent/napari-sairyscan#README.md', 'Source Code, https://github.com/sylvainprigent/napari-sairyscan', 'User Support, https://github.com/sylvainprigent/napari-sairyscan/issues']",napari-sairyscan.get_reader,,napari-sairyscan.make_qwidget,napari-sairyscan.make_sample_data,['*.czi'],,,https://pypi.org/project/napari-sairyscan,, -307,Segment Anything,0.4.13,2023-05-05,2023-08-03,napari-sam,Karol Gotkowski,karol.gotkowski@dkfz.de,Apache-2.0,https://github.com/MIC-DKFZ/napari-sam,Segment anything with Meta AI's new SAM model!,>=3.8,"['numpy', 'magicgui', 'qtpy', 'napari', 'vispy', 'tqdm', 'napari-nifti', 'superqt', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# Segment Anything Model (SAM) in Napari +320,Segment Anything,0.4.13,2023-05-05,2023-08-03,napari-sam,Karol Gotkowski,karol.gotkowski@dkfz.de,Apache-2.0,https://github.com/MIC-DKFZ/napari-sam,Segment anything with Meta AI's new SAM model!,>=3.8,"['numpy', 'magicgui', 'qtpy', 'napari', 'vispy', 'tqdm', 'napari-nifti', 'superqt', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# Segment Anything Model (SAM) in Napari [![License Apache Software License 2.0](https://img.shields.io/pypi/l/napari-sam.svg?color=green)](https://github.com/MIC-DKFZ/napari-sam/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-sam.svg?color=green)](https://pypi.org/project/napari-sam) @@ -30476,7 +31495,7 @@ napari-sam is developed and maintained by the Applied Computer Vision Lab (ACVL) and the [Division of Medical Image Computing](https://www.dkfz.de/en/mic/index.php) at the [German Cancer Research Center (DKFZ)](https://www.dkfz.de/en/index.html). ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/MIC-DKFZ/napari-sam/issues', 'Documentation, https://github.com/MIC-DKFZ/napari-sam#README.md', 'Source Code, https://github.com/MIC-DKFZ/napari-sam', 'User Support, https://github.com/MIC-DKFZ/napari-sam/issues']",,,napari-sam.make_qwidget,,,,,https://pypi.org/project/napari-sam,https://github.com/MIC-DKFZ/napari-sam, -308,napari-SAM4IS,0.0.6,2023-05-05,2023-12-08,napari-SAM4IS,Hiroki Kawai,h.kawai888@gmail.com,Apache-2.0,https://github.com/hiroalchem/napari-SAM4IS,Create annotations for instance segmentation using Segment Anything models,>=3.8,"['numpy', 'magicgui', 'qtpy', 'torch', 'torchvision', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-SAM4IS +321,napari-SAM4IS,0.0.6,2023-05-05,2023-12-08,napari-SAM4IS,Hiroki Kawai,h.kawai888@gmail.com,Apache-2.0,https://github.com/hiroalchem/napari-SAM4IS,Create annotations for instance segmentation using Segment Anything models,>=3.8,"['numpy', 'magicgui', 'qtpy', 'torch', 'torchvision', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-SAM4IS [![License Apache Software License 2.0](https://img.shields.io/pypi/l/napari-SAM4IS.svg?color=green)](https://github.com/hiroalchem/napari-SAM4IS/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-SAM4IS.svg?color=green)](https://pypi.org/project/napari-SAM4IS) @@ -30608,7 +31627,133 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/hiroalchem/napari-SAM4IS/issues', 'Documentation, https://github.com/hiroalchem/napari-SAM4IS#README.md', 'Source Code, https://github.com/hiroalchem/napari-SAM4IS', 'User Support, https://github.com/hiroalchem/napari-SAM4IS/issues']",,,napari-SAM4IS.make_sam_widget,,,,,https://pypi.org/project/napari-SAM4IS,https://github.com/hiroalchem/napari-SAM4IS, -309,napari-save-transformed,0.0.2,,,napari-save-transformed,Jan Eglinger,Jan Eglinger ,,,Napari plugin to save layers with their transforms applied.,>=3.9,['napari'],"# napari-save-transformed +322,Segment Anything V2,0.0.5,,,napari-SAMV2,Krishnan Venkataraman,krishvraman95@gmail.com," +Copyright (c) 2024, Krishnan Venkataraman +All rights reserved. + +Redistribution and use in source and binary forms, with or without +modification, are permitted provided that the following conditions are met: + +* Redistributions of source code must retain the above copyright notice, this + list of conditions and the following disclaimer. + +* Redistributions in binary form must reproduce the above copyright notice, + this list of conditions and the following disclaimer in the documentation + and/or other materials provided with the distribution. + +* Neither the name of copyright holder nor the names of its + contributors may be used to endorse or promote products derived from + this software without specific prior written permission. + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ""AS IS"" +AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE +IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE +DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE +FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL +DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR +SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER +CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, +OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE +OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. +",,Napari plugin for segment anything version 2 model from meta. Plugin primarily useful for segmenting 3d volumetric data or 3d time series data. ,>=3.9,"['numpy', 'magicgui', 'qtpy', 'scikit-image', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""', 'numpy; extra == ""testing""']","# napari-SAMV2 + +Napari plugin to use segment anything version 2 models from Meta. + +Plugin primarily made for segmenting 3d volumetric data or 3d time series data. + +---------------------------------- + + +## Installation + +Pre-requisite of samv2 installation needed: --- Our current plugin supports only sam v 2.0 not 2.1. So, we need to pull the SAM repo around september 15 ,2024 (last update of SAM2.0) + + git clone https://github.com/facebookresearch/segment-anything-2.git + cd segment-anything-2 + git rev-list -n 1 --before=""2024-09-15"" HEAD + git checkout + pip install -e . + +You can install `napari-SAMV2` via [pip]: + + pip install napari-SAMV2 + +****** + +The plugin and installation tested with python 3.10 in conda environment with pytorch-cuda=12.1 + +conda environment with example : + + conda create -n samv2_env python=3.10 + conda activate samv2_env + conda install pytorch torchvision torchaudio pytorch-cuda=12.1 -c pytorch -c nvidia + python -m pip install ""napari[all]"" + + git clone https://github.com/facebookresearch/segment-anything-2.git + cd segment-anything-2 + git rev-list -n 1 --before=""2024-09-15"" HEAD + + git checkout + pip install -e . + pip install napari-SAMV2 + +***** + +## Usage + +Middle mouse click - positive point + +Ctrl + Middle mouse click - negative point + +Time Series Segmentation : + +![samv2_time_series_demo](https://github.com/user-attachments/assets/078ca2bb-3016-4257-ac7c-c3cde8f9d125) + + + +Volume Segmentation : + +![samv2_volume_segmentation](https://github.com/user-attachments/assets/af05fcc4-a60d-44e8-ae05-70764d96e828) + + + +Reference : + +Example Data from in demo videos from, +Cell tracking challenge - https://celltrackingchallenge.net/ +FlyEM project - https://www.janelia.org/project-team/flyem/hemibrain + + +## License + +Distributed under the terms of the [BSD-3] license, +""napari-SAMV2"" is free and open source software + + + +## Issues + +If you encounter any problems, please [file an issue] along with a detailed description. + +[napari]: https://github.com/napari/napari +[Cookiecutter]: https://github.com/audreyr/cookiecutter +[@napari]: https://github.com/napari +[MIT]: http://opensource.org/licenses/MIT +[BSD-3]: http://opensource.org/licenses/BSD-3-Clause +[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt +[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt +[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0 +[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt +[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin + +[file an issue]: https://github.com/Krishvraman/napari-SAMV2/issues + +[napari]: https://github.com/napari/napari +[tox]: https://tox.readthedocs.io/en/latest/ +[pip]: https://pypi.org/project/pip/ +[PyPI]: https://pypi.org/ +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/Krishvraman/napari-SAMV2/issues', 'Documentation, https://github.com/Krishvraman/napari-SAMV2#README.md', 'Source Code, https://github.com/Krishvraman/napari-SAMV2', 'User Support, https://github.com/Krishvraman/napari-SAMV2/issues']",,,napari-SAMV2.make_qwidget,,,,,https://pypi.org/project/napari-SAMV2,, +323,napari-save-transformed,0.0.2,,,napari-save-transformed,Jan Eglinger,Jan Eglinger ,,,Napari plugin to save layers with their transforms applied.,>=3.9,['napari'],"# napari-save-transformed [![PyPI - Version](https://img.shields.io/pypi/v/napari-save-transformed.svg)](https://pypi.org/project/napari-save-transformed) [![PyPI - Python Version](https://img.shields.io/pypi/pyversions/napari-save-transformed.svg)](https://pypi.org/project/napari-save-transformed) @@ -30630,7 +31775,7 @@ pip install napari-save-transformed `napari-save-transformed` is distributed under the terms of the [BSD-3-Clause](https://spdx.org/licenses/BSD-3-Clause.html) license. ","['Development Status :: 4 - Beta', 'Framework :: napari', 'Programming Language :: Python', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Programming Language :: Python :: Implementation :: CPython', 'Programming Language :: Python :: Implementation :: PyPy']","['Documentation, https://github.com/fmi-faim/napari-save-transformed#readme', 'Issues, https://github.com/fmi-faim/napari-save-transformed/issues', 'Source, https://github.com/fmi-faim/napari-save-transformed']",,napari-save-transformed.write_transformed_layers,,,,['.tif'],,https://pypi.org/project/napari-save-transformed,, -310,sc3D Viewer,1.1.0,2022-08-18,2023-07-27,napari-sc3D-viewer,Leo Guignard,leo.guignard@univ-amu.fr,MIT,https://github.com/GuignardLab/napari-sc3D-viewer,A plugin to visualize 3D single cell omics,>=3.8,"['numpy', 'magicgui', 'qtpy', 'sc-3D', 'matplotlib', ""pyvista ; extra == 'pyvista'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-sc3D-viewer +324,sc3D Viewer,1.1.0,2022-08-18,2023-07-27,napari-sc3D-viewer,Leo Guignard,leo.guignard@univ-amu.fr,MIT,https://github.com/GuignardLab/napari-sc3D-viewer,A plugin to visualize 3D single cell omics,>=3.8,"['numpy', 'magicgui', 'qtpy', 'sc-3D', 'matplotlib', ""pyvista ; extra == 'pyvista'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-sc3D-viewer [![License](https://img.shields.io/pypi/l/napari-sc3D-viewer.svg?color=green)](https://raw.githubusercontent.com/GuignardLab/napari-sc3D-viewer/main/LICENSE) [![Python Version](https://img.shields.io/pypi/pyversions/napari-sc3D-viewer.svg?color=green)](https://python.org) @@ -30883,7 +32028,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [anndata]: https://anndata.readthedocs.io/en/latest/ [conda]: https://conda.io ","['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['Bug Tracker, https://github.com/GuignardLab/napari-sc3D-viewer/issues', 'Documentation, https://github.com/GuignardLab/napari-sc3D-viewer#README.md', 'Source Code, https://github.com/GuignardLab/napari-sc3D-viewer', 'User Support, https://github.com/GuignardLab/napari-sc3D-viewer/issues', 'Twitter, https://twitter.com/guignardlab']",,,napari-sc3D-viewer.load_atlas,,,,,https://pypi.org/project/napari-sc3D-viewer,https://github.com/GuignardLab/napari-sc3D-viewer, -311,napari-script-editor,0.2.10,2022-02-14,2023-07-08,napari-script-editor,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,https://github.com/haesleinhuepf/napari-script-editor,A python script editor for napari,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari', 'haesleinhuepf-pyqode.core (>=2.15.5)', 'haesleinhuepf-pyqode.python (>=2.15.2)', 'napari-tools-menu', 'jedi (>=0.18.0)', 'pyflakes (<=2.4.0)', 'imageio (!=2.22.1)']","# napari-script-editor +325,napari-script-editor,0.2.10,2022-02-14,2023-07-08,napari-script-editor,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,https://github.com/haesleinhuepf/napari-script-editor,A python script editor for napari,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari', 'haesleinhuepf-pyqode.core (>=2.15.5)', 'haesleinhuepf-pyqode.python (>=2.15.2)', 'napari-tools-menu', 'jedi (>=0.18.0)', 'pyflakes (<=2.4.0)', 'imageio (!=2.22.1)']","# napari-script-editor [![License](https://img.shields.io/pypi/l/napari-script-editor.svg?color=green)](https://github.com/haesleinhuepf/napari-script-editor/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-script-editor.svg?color=green)](https://pypi.org/project/napari-script-editor) @@ -30986,7 +32131,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Text Editors :: Integrated Development Environments (IDE)', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/haesleinhuepf/napari-script-editor/issues', 'Documentation, https://github.com/haesleinhuepf/napari-script-editor#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-script-editor', 'User Support, https://github.com/haesleinhuepf/napari-script-editor/issues']",,,napari-script-editor.ScriptEditor,,,,,https://pypi.org/project/napari-script-editor,https://github.com/haesleinhuepf/napari-script-editor, -312,napari sdeconv,1.0.1,2022-02-13,2023-06-18,napari-sdeconv,Sylvain Prigent,meriadec.prigent@gmail.com,BSD-3-Clause,https://github.com/sylvainprigent/napari-sdeconv,2D and 3D deconvolution,>=3.8,"['numpy', 'magicgui', 'qtpy', 'sdeconv (>=1.0.1)', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""sdeconv (>=1.0.1) ; extra == 'testing'""]","# napari-sdeconv +326,napari sdeconv,1.0.1,2022-02-13,2023-06-18,napari-sdeconv,Sylvain Prigent,meriadec.prigent@gmail.com,BSD-3-Clause,https://github.com/sylvainprigent/napari-sdeconv,2D and 3D deconvolution,>=3.8,"['numpy', 'magicgui', 'qtpy', 'sdeconv (>=1.0.1)', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""sdeconv (>=1.0.1) ; extra == 'testing'""]","# napari-sdeconv [![License BSD-3](https://img.shields.io/pypi/l/napari-sdeconv.svg?color=green)](https://github.com/sylvainprigent/napari-sdeconv/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-sdeconv.svg?color=green)](https://pypi.org/project/napari-sdeconv) @@ -31054,7 +32199,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['Bug Tracker, https://github.com/sylvainprigent/napari-sdeconv/issues', 'Documentation, https://github.com/sylvainprigent/napari-sdeconv#README.md', 'Source Code, https://github.com/sylvainprigent/napari-sdeconv', 'User Support, https://github.com/sylvainprigent/napari-sdeconv/issues']",,,napari-sdeconv.gaussian_widget,napari-sdeconv.make_sample_data,,,,https://pypi.org/project/napari-sdeconv,https://github.com/sylvainprigent/napari-sdeconv, -313,napari Sediment,0.2.1,,,napari-sediment,Guillaume Witz,guillaume.witz@unibe.ch,BSD-3-Clause,,A plugin to process hyperspectral images of sediments,>=3.9,"['numpy', 'zarr', 'magicgui', 'qtpy', 'napari-guitils', 'napari-convpaint', 'superqt', 'natsort', 'spectral', 'matplotlib', 'scikit-image', 'scikit-learn', 'PyYAML', 'microfilm', 'dask', 'distributed', 'tqdm', 'cmap', 'colour-science', 'torch; extra == ""classifier""', 'torchvision; extra == ""classifier""', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# napari-sediment +327,napari Sediment,0.2.3,,,napari-sediment,Guillaume Witz,guillaume.witz@unibe.ch,BSD-3-Clause,,A plugin to process hyperspectral images of sediments,>=3.9,"['numpy<2', 'zarr', 'magicgui', 'qtpy', 'napari-guitils', 'napari-convpaint', 'superqt', 'natsort', 'spectral', 'matplotlib', 'scikit-image', 'scikit-learn', 'PyYAML', 'microfilm', 'dask', 'distributed', 'tqdm', 'cmap', 'colour-science', 'torch; extra == ""classifier""', 'torchvision; extra == ""classifier""', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# napari-sediment [![License BSD-3](https://img.shields.io/pypi/l/napari-sediment.svg?color=green)](https://github.com/guiwitz/napari-sediment/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-sediment.svg?color=green)](https://pypi.org/project/napari-sediment) @@ -31128,7 +32273,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/guiwitz/napari-sediment/issues', 'Documentation, https://github.com/guiwitz/napari-sediment#README.md', 'Source Code, https://github.com/guiwitz/napari-sediment', 'User Support, https://github.com/guiwitz/napari-sediment/issues']",napari-sediment.get_reader,,napari-sediment.make_qwidget,,"['*.hdr', '*.zarr']",,,https://pypi.org/project/napari-sediment,, -314,SeedSeg Segmentation,0.0.2,2023-08-01,2023-08-03,napari-seedseg,Reza Akbarian Bafghi,reza.akb98@gmail.com,BSD-3,https://github.com/rezaakb/napari-seedseg,A simple plugin for segmentation,>=3.8,"['napari', 'numpy', 'magicgui', 'qtpy', 'opencv-python-headless', 'scikit-image>=0.19.3', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# napari-seedseg +328,SeedSeg Segmentation,0.0.2,2023-08-01,2023-08-03,napari-seedseg,Reza Akbarian Bafghi,reza.akb98@gmail.com,BSD-3,https://github.com/rezaakb/napari-seedseg,A simple plugin for segmentation,>=3.8,"['napari', 'numpy', 'magicgui', 'qtpy', 'opencv-python-headless', 'scikit-image>=0.19.3', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# napari-seedseg [![License BSD-3](https://img.shields.io/pypi/l/napari-seedseg.svg?color=green)](https://github.com/rezaakb/napari-seedseg/tree/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-seedseg.svg?color=green)](https://pypi.org/project/napari-seedseg) @@ -31219,7 +32364,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/rezaakb/napari-seedseg/issues', 'Documentation, https://github.com/rezaakb/napari-seedseg#README.md', 'Source Code, https://github.com/rezaakb/napari-seedseg', 'User Support, https://github.com/rezaakb/napari-seedseg/issues']",,,napari-seedseg.make_qwidget,,,,,https://pypi.org/project/napari-seedseg,https://github.com/rezaakb/napari-seedseg, -315,Segment organoid,0.3.12,2023-04-23,2023-09-07,napari-segment,Andrey Aristov,aaristov@pasteur.fr,BSD-3-Clause,https://github.com/aaristov/napari-segment,Segment organoids and measure intensities,>=3.8,"['dask', 'imageio-ffmpeg', 'matplotlib', 'napari', 'nd2', 'numpy', 'pytest-qt', 'scikit-image', 'zarr']","# napari-segment +329,Segment organoid,0.3.12,2023-04-23,2023-09-07,napari-segment,Andrey Aristov,aaristov@pasteur.fr,BSD-3-Clause,https://github.com/aaristov/napari-segment,Segment organoids and measure intensities,>=3.8,"['dask', 'imageio-ffmpeg', 'matplotlib', 'napari', 'nd2', 'numpy', 'pytest-qt', 'scikit-image', 'zarr']","# napari-segment [![License](https://img.shields.io/pypi/l/napari-segment.svg?color=green)](https://github.com/aaristov/napari-segment/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-segment.svg?color=green)](https://pypi.org/project/napari-segment) @@ -31320,7 +32465,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['Bug Tracker, https://github.com/aaristov/napari-segment/issues', 'Documentation, https://github.com/aaristov/napari-segment#README.md', 'Source Code, https://github.com/aaristov/napari-segment', 'User Support, https://github.com/aaristov/napari-segment/issues']",napari-segment.get_reader,napari-segment.write_multiple,napari-segment.make_qwidget,napari-segment.make_late_aggregate,"['*.npy', '*.nd2', '*.tif']",,['.npy'],https://pypi.org/project/napari-segment,https://github.com/aaristov/napari-segment, -316,Segment Anything,0.1.4,2023-05-05,2023-06-18,napari-segment-anything,Jordao Bragantini,jordao.bragantini@czbiohub.org,Apache-2.0,https://github.com/jookuma/napari-segment-anything,Napari plugin of Segment Anything Model (SAM),>=3.8,"['numpy', 'torch', 'torchvision', 'segment-anything', 'qtpy', 'magicgui', 'napari', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-segment-anything +330,Segment Anything,0.1.4,2023-05-05,2023-06-18,napari-segment-anything,Jordao Bragantini,jordao.bragantini@czbiohub.org,Apache-2.0,https://github.com/jookuma/napari-segment-anything,Napari plugin of Segment Anything Model (SAM),>=3.8,"['numpy', 'torch', 'torchvision', 'segment-anything', 'qtpy', 'magicgui', 'napari', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-segment-anything [![License Apache Software License 2.0](https://img.shields.io/pypi/l/napari-segment-anything.svg?color=green)](https://github.com/jookuma/napari-segment-anything/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-segment-anything.svg?color=green)](https://pypi.org/project/napari-segment-anything) @@ -31416,7 +32561,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/jookuma/napari-segment-anything/issues', 'Documentation, https://github.com/jookuma/napari-segment-anything#README.md', 'Source Code, https://github.com/jookuma/napari-segment-anything', 'User Support, https://github.com/jookuma/napari-segment-anything/issues']",,,napari-segment-anything.samwidget,,,,,https://pypi.org/project/napari-segment-anything,https://github.com/jookuma/napari-segment-anything, -317,Segment Anything 2,0.0.1,,,napari-segment-anything-2,Jordão Bragantini,jordao.bragantini@czbiohub.org," +331,Segment Anything 2,0.0.1,,,napari-segment-anything-2,Jordão Bragantini,jordao.bragantini@czbiohub.org," Copyright (c) 2024, Jordão Bragantini All rights reserved. @@ -31512,7 +32657,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/JoOkuma/napari-segment-anything-2/issues', 'Documentation, https://github.com/JoOkuma/napari-segment-anything-2#README.md', 'Source Code, https://github.com/JoOkuma/napari-segment-anything-2', 'User Support, https://github.com/JoOkuma/napari-segment-anything-2/issues']",,,napari-segment-anything-2.sam2,,,,,https://pypi.org/project/napari-segment-anything-2,, -318,napari-segment-blobs-and-things-with-membranes,0.3.8,2022-02-05,2024-03-26,napari-segment-blobs-and-things-with-membranes,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,https://github.com/haesleinhuepf/napari-segment-blobs-and-things-with-membranes,A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/or membranes,>=3.8,"['napari-plugin-engine >=0.1.4', 'numpy', 'scikit-image', 'scipy', 'napari-tools-menu >=0.1.17', 'napari-time-slicer >=0.4.8', 'napari-assistant', 'stackview >=0.3.2']","# napari-segment-blobs-and-things-with-membranes (nsbatwm) +332,napari-segment-blobs-and-things-with-membranes,0.3.12,2022-02-05,2024-12-26,napari-segment-blobs-and-things-with-membranes,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,https://github.com/haesleinhuepf/napari-segment-blobs-and-things-with-membranes,A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/or membranes,>=3.8,"['napari-plugin-engine>=0.1.4', 'numpy', 'scikit-image', 'scipy', 'napari-tools-menu>=0.1.17', 'napari-time-slicer>=0.4.8', 'napari-assistant', 'stackview>=0.9.1']","# napari-segment-blobs-and-things-with-membranes (nsbatwm) [![License](https://img.shields.io/pypi/l/napari-segment-blobs-and-things-with-membranes.svg?color=green)](https://github.com/haesleinhuepf/napari-segment-blobs-and-things-with-membranes/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-segment-blobs-and-things-with-membranes.svg?color=green)](https://pypi.org/project/napari-segment-blobs-and-things-with-membranes) @@ -31653,7 +32798,7 @@ If you encounter any problems, please create a thread on [image.sc] along with a [image.sc]: https://image.sc [@haesleinhuepf]: https://twitter.com/haesleinhuepf ","['Development Status :: 3 - Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/haesleinhuepf/napari-segment-blobs-and-things-with-membranes/issues', 'Documentation, https://github.com/haesleinhuepf/napari-segment-blobs-and-things-with-membranes#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-segment-blobs-and-things-with-membranes', 'User Support, https://github.com/haesleinhuepf/napari-segment-blobs-and-things-with-membranes/issues']",,,napari-segment-blobs-and-things-with-membranes.napari_experimental_provide_function,,,,,https://pypi.org/project/napari-segment-blobs-and-things-with-membranes,https://github.com/haesleinhuepf/napari-segment-blobs-and-things-with-membranes, -319,Napari Segment Everything,0.1.6,,,napari-segment-everything,"Brian Northan, Ian Coccimiglio",bnorthan@gmail.com,BSD-3-Clause,,A Napari SAM plugin to segment everything in your image (not just some things),>=3.9,"['numpy', 'torch', 'torchvision', 'segment-anything', 'magicgui', 'qtpy', 'scikit-image', 'napari', 'gdown', 'opencv-python', 'timm', 'torchpack', 'onnx', 'onnxsim', 'matplotlib', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-segment-everything +333,Napari Segment Everything,0.1.6,,,napari-segment-everything,"Brian Northan, Ian Coccimiglio",bnorthan@gmail.com,BSD-3-Clause,,A Napari SAM plugin to segment everything in your image (not just some things),>=3.9,"['numpy', 'torch', 'torchvision', 'segment-anything', 'magicgui', 'qtpy', 'scikit-image', 'napari', 'gdown', 'opencv-python', 'timm', 'torchpack', 'onnx', 'onnxsim', 'matplotlib', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-segment-everything [![License BSD-3](https://img.shields.io/pypi/l/napari-segment-everything.svg?color=green)](https://github.com/True-North-Intelligent-Algorithms/napari-segment-everything/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-segment-everything.svg?color=green)](https://pypi.org/project/napari-segment-everything) @@ -31726,7 +32871,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']",,,,napari-segment-everything.napari_segment_everything,,,,,https://pypi.org/project/napari-segment-everything,, -320,Segmentation Filter Overlap,0.0.1,,,napari-segmentation-overlap-filter,Vanessa Dao,vanessadao31@yahoo.co.uk,BSD-3-Clause,,A simple plugin to remove overlapping segmentations from images,>=3.8,"['numpy', 'magicgui', 'qtpy', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# PARSEG +334,Segmentation Filter Overlap,0.0.1,,,napari-segmentation-overlap-filter,Vanessa Dao,vanessadao31@yahoo.co.uk,BSD-3-Clause,,A simple plugin to remove overlapping segmentations from images,>=3.8,"['numpy', 'magicgui', 'qtpy', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# PARSEG [![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/FrancisCrickInstitute/CALM_Template/HEAD?labpath=blob%2Fmain%2Fsegment_image.ipynb) [![Python 3.11](https://img.shields.io/badge/python-3.11-blue.svg)](https://www.python.org/downloads/release/python-3115/) @@ -31779,7 +32924,7 @@ If you encounter any problems, please file an issue along with a detailed descri [pip]: https://pypi.org/project/pip/ [example notebook]: https://github.com/FrancisCrickInstitute/PARSEG/blob/main/Notebooks/Combine_Segmentations_And_Filter_Overlaps.ipynb ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']",,,,napari-segmentation-overlap-filter.make_plugin_widget,,,,,https://pypi.org/project/napari-segmentation-overlap-filter,, -321,serialcellpose,0.2.2,2023-12-04,2023-12-04,napari-serialcellpose,Guillaume Witz,guillaume.witz@unibe.ch,BSD-3-Clause,https://pypi.org/project/napari-serialcellpose,A simple plugin to batch segment cells with cellpose,>=3.8,"['cellpose', 'numpy', 'magicgui', 'qtpy', 'matplotlib', 'napari-skimage-regionprops', 'napari-aicsimageio', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-serialcellpose +335,serialcellpose,0.2.2,2023-12-04,2023-12-04,napari-serialcellpose,Guillaume Witz,guillaume.witz@unibe.ch,BSD-3-Clause,https://pypi.org/project/napari-serialcellpose,A simple plugin to batch segment cells with cellpose,>=3.8,"['cellpose', 'numpy', 'magicgui', 'qtpy', 'matplotlib', 'napari-skimage-regionprops', 'napari-aicsimageio', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-serialcellpose [![License](https://img.shields.io/pypi/l/napari-serialcellpose.svg?color=green)](https://github.com/guiwitz/napari-serialcellpose/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-serialcellpose.svg?color=green)](https://pypi.org/project/napari-serialcellpose) @@ -31909,7 +33054,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/guiwitz/napari-serialcellpose/issues', 'Documentation, https://github.com/guiwitz/napari-serialcellpose#README.md', 'Source Code, https://github.com/guiwitz/napari-serialcellpose', 'User Support, https://github.com/guiwitz/napari-serialcellpose/issues']",,,napari-serialcellpose.make_qwidget,,,,,https://pypi.org/project/napari-serialcellpose,, -322,shape odyssey,0.1.1,,,napari-shape-odyssey,Johannes Soltwedel,johannes_richard.soltwedel@tu-dresden.de,BSD-3-Clause,,Analyze shapes of meshes,>=3.8,"['numpy', 'vedo', 'pandas', 'napari', 'napari-stress', 'napari-process-points-and-surfaces', 'pyfmaps', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""PyQt5 ; extra == 'testing'""]","# napari-shape-odyssey +336,shape odyssey,0.1.1,,,napari-shape-odyssey,Johannes Soltwedel,johannes_richard.soltwedel@tu-dresden.de,BSD-3-Clause,,Analyze shapes of meshes,>=3.8,"['numpy', 'vedo', 'pandas', 'napari', 'napari-stress', 'napari-process-points-and-surfaces', 'pyfmaps', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""PyQt5 ; extra == 'testing'""]","# napari-shape-odyssey [![License BSD-3](https://img.shields.io/pypi/l/napari-shape-odyssey.svg?color=green)](https://github.com/jo-mueller/napari-shape-odyssey/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-shape-odyssey.svg?color=green)](https://pypi.org/project/napari-shape-odyssey) @@ -31998,7 +33143,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/jo-mueller/napari-shape-odyssey/issues', 'Documentation, https://jo-mueller.github.io/napari-shape-odyssey/intro.html', 'Source Code, https://github.com/jo-mueller/napari-shape-odyssey', 'User Support, https://github.com/jo-mueller/napari-shape-odyssey/issues']",napari-shape-odyssey.get_reader,napari-shape-odyssey.write_multiple,napari-shape-odyssey.shape_fingerprint_spectral,,"['*.obj', '*.stl', '*.off', '*.ply', '*.vtk', '*.vtp']",,['.npy'],https://pypi.org/project/napari-shape-odyssey,, -323,napari sif file reader,0.0.2,2023-04-11,2023-11-06,napari-sif-reader,Ruben Lopez,rjlopez2@gmail.com,BSD-3-Clause,https://github.com/rjlopez2/napari-sif-reader,This is a simple wraper to read .sif format files from Andor Technology.,>=3.8,"['numpy', 'sif-parser', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pillow ; extra == 'testing'""]","# napari-sif-reader +337,napari sif file reader,0.0.2,2023-04-11,2023-11-06,napari-sif-reader,Ruben Lopez,rjlopez2@gmail.com,BSD-3-Clause,https://github.com/rjlopez2/napari-sif-reader,This is a simple wraper to read .sif format files from Andor Technology.,>=3.8,"['numpy', 'sif-parser', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pillow ; extra == 'testing'""]","# napari-sif-reader [![License BSD-3](https://img.shields.io/pypi/l/napari-sif-reader.svg?color=green)](https://github.com/rjlopez2/napari-sif-reader/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-sif-reader.svg?color=green)](https://pypi.org/project/napari-sif-reader) @@ -32066,7 +33211,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/rjlopez2/napari-sif-reader/issues', 'Documentation, https://github.com/rjlopez2/napari-sif-reader#README.md', 'Source Code, https://github.com/rjlopez2/napari-sif-reader', 'User Support, https://github.com/rjlopez2/napari-sif-reader/issues']",napari-sif-reader.get_reader,,,napari-sif-reader.make_sample_data,['*.sif'],,,https://pypi.org/project/napari-sif-reader,https://github.com/rjlopez2/napari-sif-reader, -324,SIFTReg,0.1.2,2022-08-18,2023-06-18,napari-sift-registration,John Fozard,john.fozard@gmail.com,BSD-3-Clause,https://github.com/jfozard/napari-sift-registration,"Simple plugin for SIFT keypoint detection, and affine registration with RANSAC, based on scikit-image",>=3.8,"['numpy', 'magicgui', 'qtpy', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# skimage-sift-registration +338,SIFTReg,0.1.2,2022-08-18,2023-06-18,napari-sift-registration,John Fozard,john.fozard@gmail.com,BSD-3-Clause,https://github.com/jfozard/napari-sift-registration,"Simple plugin for SIFT keypoint detection, and affine registration with RANSAC, based on scikit-image",>=3.8,"['numpy', 'magicgui', 'qtpy', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# skimage-sift-registration [![License BSD-3](https://img.shields.io/pypi/l/napari-sift-registration.svg?color=green)](https://github.com/jfozard/napari-sift-registration/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-sift-registration.svg?color=green)](https://pypi.org/project/napari-sift-registration) @@ -32181,7 +33326,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/jfozard/napari-sift-registration/issues', 'Documentation, https://github.com/jfozard/napari-sift-registration#README.md', 'Source Code, https://github.com/jfozard/napari-sift-registration', 'User Support, https://github.com/jfozard/napari-sift-registration/issues']",,,napari-sift-registration.make_magic_widget,,,,,https://pypi.org/project/napari-sift-registration,https://github.com/jfozard/napari-sift-registration, -325,Napari Signal Selector,0.0.3,2023-10-29,2023-10-29,napari-signal-selector,Marcelo Leomil Zoccoler,marzoccoler@gmail.com,BSD-3-Clause,https://pypi.org/project/napari-signal-selector,"An interactive signal selector for napari, based on napari-matplotlib.",>=3.8,"['numpy', 'magicgui', 'qtpy', 'napari-matplotlib >=1.1.0', 'napari-skimage-regionprops', 'cmap', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-signal-selector +339,Napari Signal Selector,0.0.6,2023-10-29,2023-10-29,napari-signal-selector,Marcelo Leomil Zoccoler,marzoccoler@gmail.com,BSD-3-Clause,https://pypi.org/project/napari-signal-selector,"An interactive signal selector for napari, based on matplotlib.",>=3.8,"['numpy', 'magicgui', 'qtpy', 'cmap', 'nap-plot-tools>=0.1.2', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari>=0.4.19; extra == ""testing""', 'pyqt5; extra == ""testing""']","# napari-signal-selector [![License BSD-3](https://img.shields.io/pypi/l/napari-signal-selector.svg?color=green)](https://github.com/zoccoler/napari-signal-selector/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-signal-selector.svg?color=green)](https://pypi.org/project/napari-signal-selector) @@ -32189,8 +33334,9 @@ If you encounter any problems, please [file an issue] along with a detailed desc [![tests](https://github.com/zoccoler/napari-signal-selector/workflows/tests/badge.svg)](https://github.com/zoccoler/napari-signal-selector/actions) [![codecov](https://codecov.io/gh/zoccoler/napari-signal-selector/branch/main/graph/badge.svg)](https://codecov.io/gh/zoccoler/napari-signal-selector) [![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-signal-selector)](https://napari-hub.org/plugins/napari-signal-selector) +[![DOI](https://zenodo.org/badge/661588266.svg)](https://zenodo.org/doi/10.5281/zenodo.10041219) -An interactive signal selector and annotator for napari, based on [napari-matplotlib](https://github.com/matplotlib/napari-matplotlib#napari-matplotlib). +An interactive signal selector and annotator for napari, based on [matplotlib](https://matplotlib.org/stable/). [Jump to Intallation](#installation) @@ -32284,7 +33430,7 @@ Also, with the selection tool enbaled, by holding 'SHIFT' and left-clicking, you ### Exporting Annotations -The table with annotations can be displayed in napari using the 'Show table' widget from [napari-skimage-regionprops plugin](https://github.com/haesleinhuepf/napari-skimage-regionprops#napari-skimage-regionprops-nsr), which is available under `Tools > Measurements > Show Table (nsr)`. +The table with annotations can be displayed in napari using the 'Show table' widget from [napari-skimage-regionprops plugin](https://github.com/haesleinhuepf/napari-skimage-regionprops#napari-skimage-regionprops-nsr), which is available under `Tools > Measurements > Show Table (nsr)`. This plugin may require a specific napari version, so check its documentation for more details. ![](https://github.com/zoccoler/napari-signal-selector/raw/main/images/table_view.gif) @@ -32292,6 +33438,14 @@ By the way, with `'show selected'` checked, you can click on a label row in the To export the table, click on `'Save as csv...'`. +Another option is to run the following code in the napari console (replace `'Labels'` with the name of your Labels layer and `'annotations.csv'` with the desired file name or file path): + +```python +import pandas as pd +df = viewer.layers['Labels'].data.features +df.to_csv('annotations.csv') +``` + ## Installation You can install `napari-signal-selector` via [pip]. Follow these steps from a terminal. @@ -32347,8 +33501,8 @@ If you encounter any problems, please [file an issue] along with a detailed desc [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/zoccoler/napari-signal-selector/issues', 'Documentation, https://github.com/zoccoler/napari-signal-selector#README.md', 'Source Code, https://github.com/zoccoler/napari-signal-selector', 'User Support, https://github.com/zoccoler/napari-signal-selector/issues']",,,napari-signal-selector.make_inter_features_line_widget,napari-signal-selector.load_flashing_polygons_data,,,,https://pypi.org/project/napari-signal-selector,, -326,napari SIM processor,0.1.1,2022-07-07,2023-11-07,napari-sim-processor,Andrea Bassi and Mark Neil,andrea1.bassi@polimi.it,BSD-3-Clause,https://github.com/andreabassi78/napari-sim-processor,A plugin to process Structured Illumination Microscopy data with gpu acceleration,>=3.8,"['numpy', 'scipy', 'magicgui', 'qtpy', 'matplotlib', 'superqt >=0.3.2', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""matplotlib ; extra == 'testing'"", ""numpy ; extra == 'testing'"", ""scipy ; extra == 'testing'"", ""superqt ; extra == 'testing'""]","# napari-sim-processor +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/zoccoler/napari-signal-selector/issues', 'Documentation, https://github.com/zoccoler/napari-signal-selector#README.md', 'Source Code, https://github.com/zoccoler/napari-signal-selector', 'User Support, https://github.com/zoccoler/napari-signal-selector/issues']",,,napari-signal-selector.make_inter_features_line_widget,napari-signal-selector.load_flashing_polygons_data,,,,https://pypi.org/project/napari-signal-selector,, +340,napari SIM processor,0.1.1,2022-07-07,2023-11-07,napari-sim-processor,Andrea Bassi and Mark Neil,andrea1.bassi@polimi.it,BSD-3-Clause,https://github.com/andreabassi78/napari-sim-processor,A plugin to process Structured Illumination Microscopy data with gpu acceleration,>=3.8,"['numpy', 'scipy', 'magicgui', 'qtpy', 'matplotlib', 'superqt >=0.3.2', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""matplotlib ; extra == 'testing'"", ""numpy ; extra == 'testing'"", ""scipy ; extra == 'testing'"", ""superqt ; extra == 'testing'""]","# napari-sim-processor [![License](https://img.shields.io/pypi/l/napari-sim-processor.svg?color=green)](https://github.com/andreabassi78/napari-sim-processor/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-sim-processor.svg?color=green)](https://pypi.org/project/napari-sim-processor) @@ -32493,7 +33647,88 @@ If you encounter any problems, please [file an issue] along with a detailed desc [3dSIM]: https://github.com/andreabassi78/napari-sim-processor/tree/3dSIM [SIMulator]: https://www.napari-hub.org/plugins/napari-generic-SIMulator ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/andreabassi78/napari-sim-processor/issues', 'Documentation, https://github.com/andreabassi78/napari-sim-processor#README.md', 'Source Code, https://github.com/andreabassi78/napari-sim-processor', 'User Support, https://github.com/andreabassi78/napari-sim-processor/issues']",,,napari-sim-processor.make_sim_widget,,,,,https://pypi.org/project/napari-sim-processor,https://github.com/andreabassi78/napari-sim-processor, -327,SimpleAnnotate,0.0.5,2023-11-18,2024-08-06,napari-simpleannotate,Hiroki Kawai,h.kawai888@gmail.com,BSD-3-Clause,https://pypi.org/project/napari-simpleannotate,A simple plugin to label image,>=3.8,"['numpy', 'magicgui', 'pyyaml', 'qtpy', 'scikit-image', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# napari-simpleannotate +341,Orthogonal Viewer,0.0.5,,,napari-simple-orthoviewer,Krishnan Venkataraman,krishvraman95@gmail.com," +Copyright (c) 2024, Krishnan Venkataraman +All rights reserved. + +Redistribution and use in source and binary forms, with or without +modification, are permitted provided that the following conditions are met: + +* Redistributions of source code must retain the above copyright notice, this + list of conditions and the following disclaimer. + +* Redistributions in binary form must reproduce the above copyright notice, + this list of conditions and the following disclaimer in the documentation + and/or other materials provided with the distribution. + +* Neither the name of copyright holder nor the names of its + contributors may be used to endorse or promote products derived from + this software without specific prior written permission. + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ""AS IS"" +AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE +IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE +DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE +FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL +DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR +SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER +CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, +OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE +OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. +",,A simple orthogonal viewer in napari,>=3.9,"['numpy', 'magicgui', 'qtpy', 'matplotlib', 'tifffile', 'napari', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# napari-simple-orthoviewer + +A simple orthogonal viewer in napari + +---------------------------------- +## Installation + +You can install `napari-simple-orthoviewer` via [pip]: + + pip install napari-simple-orthoviewer + + + +To install latest development version : + + pip install git+https://github.com/Krishvraman/napari-simple-orthoviewer.git + + +## Usage + +![ortho_views_with_overlay](https://github.com/user-attachments/assets/33c00852-13b8-42ca-aa37-cbd28743297c) + + + + +## License + +Distributed under the terms of the [BSD-3] license, +""napari-simple-orthoviewer"" is free and open source software + +## Issues + +If you encounter any problems, please [file an issue] along with a detailed description. + + +[napari]: https://github.com/napari/napari +[Cookiecutter]: https://github.com/audreyr/cookiecutter +[@napari]: https://github.com/napari +[MIT]: http://opensource.org/licenses/MIT +[BSD-3]: http://opensource.org/licenses/BSD-3-Clause +[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt +[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt +[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0 +[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt +[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin + +[file an issue]: https://github.com/Krishvraman/napari-simple-orthoviewer/issues + +[napari]: https://github.com/napari/napari +[tox]: https://tox.readthedocs.io/en/latest/ +[pip]: https://pypi.org/project/pip/ +[PyPI]: https://pypi.org/ +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/Krishvraman/napari-simple-orthoviewer/issues', 'Documentation, https://github.com/Krishvraman/napari-simple-orthoviewer#README.md', 'Source Code, https://github.com/Krishvraman/napari-simple-orthoviewer', 'User Support, https://github.com/Krishvraman/napari-simple-orthoviewer/issues']",,,napari-simple-orthoviewer.make_qwidget,,,,,https://pypi.org/project/napari-simple-orthoviewer,, +342,SimpleAnnotate,0.0.5,2023-11-18,2024-08-06,napari-simpleannotate,Hiroki Kawai,h.kawai888@gmail.com,BSD-3-Clause,https://pypi.org/project/napari-simpleannotate,A simple plugin to label image,>=3.8,"['numpy', 'magicgui', 'pyyaml', 'qtpy', 'scikit-image', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# napari-simpleannotate [![License BSD-3](https://img.shields.io/pypi/l/napari-simpleannotate.svg?color=green)](https://github.com/hiroalchem/napari-simpleannotate/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-simpleannotate.svg?color=green)](https://pypi.org/project/napari-simpleannotate) @@ -32584,7 +33819,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/hiroalchem/napari-simpleannotate/issues', 'Documentation, https://github.com/hiroalchem/napari-simpleannotate#README.md', 'Source Code, https://github.com/hiroalchem/napari-simpleannotate', 'User Support, https://github.com/hiroalchem/napari-simpleannotate/issues']",,,napari-simpleannotate.make_bboxwidget,,,,,https://pypi.org/project/napari-simpleannotate,, -328,napari-simpleitk-image-processing,0.4.7,2022-02-05,2024-09-30,napari-simpleitk-image-processing,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,https://github.com/haesleinhuepf/napari-simpleitk-image-processing,Process and analyze images using SimpleITK in napari,>=3.8,"['napari-plugin-engine>=0.1.4', 'numpy', 'simpleitk', 'napari-tools-menu>=0.1.17', 'napari-time-slicer', 'napari-skimage-regionprops>=0.5.1', 'napari-assistant>=0.3.10', 'pandas', 'stackview>=0.3.2']","# napari-simpleitk-image-processing (n-SimpleITK) +343,napari-simpleitk-image-processing,0.4.9,2022-02-05,2024-12-26,napari-simpleitk-image-processing,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,https://github.com/haesleinhuepf/napari-simpleitk-image-processing,Process and analyze images using SimpleITK in napari,>=3.8,"['napari-plugin-engine>=0.1.4', 'numpy', 'simpleitk', 'napari-tools-menu>=0.1.17', 'napari-time-slicer', 'napari-skimage-regionprops>=0.5.1', 'napari-assistant>=0.3.10', 'pandas', 'stackview>=0.3.2']","# napari-simpleitk-image-processing (n-SimpleITK) [![License](https://img.shields.io/pypi/l/napari-simpleitk-image-processing.svg?color=green)](https://github.com/haesleinhuepf/napari-simpleitk-image-processing/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-simpleitk-image-processing.svg?color=green)](https://pypi.org/project/napari-simpleitk-image-processing) @@ -32803,7 +34038,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 3 - Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/haesleinhuepf/napari-simpleitk-image-processing/issues', 'Documentation, https://github.com/haesleinhuepf/napari-simpleitk-image-processing#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-simpleitk-image-processing', 'User Support, https://github.com/haesleinhuepf/napari-simpleitk-image-processing/issues']",,,napari-simpleitk-image-processing.napari_experimental_provide_function,,,,,https://pypi.org/project/napari-simpleitk-image-processing,https://github.com/haesleinhuepf/napari-simpleitk-image-processing, -329,Sketchpose,0.1.8,,,napari-sketchpose,Clément Cazorla,clement.cazorla31@gmail.com,GPL-3.0-only,,A segmentation plugin to adapt Omnipose implementation to partial labelling.,>=3.8,"['numpy', 'magicgui', 'qtpy', 'cellpose-omni ==0.9.1', 'omnipose ==0.4.4', 'pyqtgraph ==0.13.3', 'matplotlib', 'light-the-torch', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-sketchpose +344,Sketchpose,0.1.8,,,napari-sketchpose,Clément Cazorla,clement.cazorla31@gmail.com,GPL-3.0-only,,A segmentation plugin to adapt Omnipose implementation to partial labelling.,>=3.8,"['numpy', 'magicgui', 'qtpy', 'cellpose-omni ==0.9.1', 'omnipose ==0.4.4', 'pyqtgraph ==0.13.3', 'matplotlib', 'light-the-torch', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-sketchpose [![License GNU GPL v3.0](https://img.shields.io/pypi/l/napari-sketchpose.svg?color=green)](https://github.com/koopa31/napari-sketchpose/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-sketchpose.svg?color=green)](https://pypi.org/project/napari-sketchpose) @@ -32909,7 +34144,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ [documentation]: https://sketchpose-doc.readthedocs.io/en/latest/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://bitbucket.org/koopa31/napari-sketchpose/issues?status=new&status=open&status=submitted&is_spam=!spam', 'Documentation, https://sketchpose-doc.readthedocs.io/en/latest/', 'Source Code, https://bitbucket.org/koopa31/napari-sketchpose/src/master', 'User Support, https://bitbucket.org/koopa31/napari-sketchpose/issues?status=new&status=open&status=submitted&is_spam=!spam']",napari-sketchpose.get_reader,napari-sketchpose.write_multiple,napari-sketchpose.make_qwidget,napari-sketchpose.make_sample_data,['*.npy'],,['.npy'],https://pypi.org/project/napari-sketchpose,, -330,napari skimage,0.4.0,2024-09-19,2024-09-19,napari-skimage,Guillaume Witz,guillaume.witz@unibe.ch," +345,napari skimage,0.4.0,2024-09-19,2024-09-19,napari-skimage,Guillaume Witz,guillaume.witz@unibe.ch," Copyright (c) 2024, Guillaume Witz, Data Science Lab, University of Bern All rights reserved. @@ -33035,7 +34270,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/guiwitz/napari-skimage/issues', 'Documentation, https://github.com/guiwitz/napari-skimage#README.md', 'Source Code, https://github.com/guiwitz/napari-skimage', 'User Support, https://github.com/guiwitz/napari-skimage/issues']",,,napari-skimage.make_farid_widget,,,,,https://pypi.org/project/napari-skimage/,, -331,napari-skimage-regionprops,0.10.1,2022-02-02,2023-06-18,napari-skimage-regionprops,"Marcelo Zoccoler, Robert Haase",robert.haase@tu-dresden.de,BSD-3,https://github.com/haesleinhuepf/napari-skimage-regionprops,A regionprops table widget plugin for napari,>=3.8,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'scikit-image', 'napari', 'pandas', 'napari-tools-menu (>=0.1.19)', 'napari-workflows', 'imageio (!=2.22.1)', 'Deprecated']","# napari-skimage-regionprops (nsr) +346,napari-skimage-regionprops,0.10.1,2022-02-02,2023-06-18,napari-skimage-regionprops,"Marcelo Zoccoler, Robert Haase",robert.haase@tu-dresden.de,BSD-3,https://github.com/haesleinhuepf/napari-skimage-regionprops,A regionprops table widget plugin for napari,>=3.8,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'scikit-image', 'napari', 'pandas', 'napari-tools-menu (>=0.1.19)', 'napari-workflows', 'imageio (!=2.22.1)', 'Deprecated']","# napari-skimage-regionprops (nsr) @@ -33376,7 +34611,7 @@ If you encounter any problems, please create a thread on [image.sc] along with a [@haesleinhuepf]: https://twitter.com/haesleinhuepf ","['Development Status :: 4 - Beta', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']",,,,napari-skimage-regionprops.napari_experimental_provide_function,,,,,https://pypi.org/project/napari-skimage-regionprops,https://github.com/haesleinhuepf/napari-skimage-regionprops, -332,BP04 Practical,0.1.3,,,napari-SMLMLAB,Piers Turner,Piers Turner ," +347,BP04 Practical,0.1.4,,,napari-SMLMLAB,Piers Turner,Piers Turner ," Copyright (c) 2024, Piers Turner All rights reserved. @@ -33404,7 +34639,7 @@ SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. -",,Napari widget for BP04 Practical.,>=3.9,"['napari[all] ==0.5.0', 'numpy', 'magicgui', 'qtpy', 'scipy', 'pyqtgraph', 'picassosr', 'matplotlib', 'tqdm', 'pyqt5-tools', 'trackpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-SMLMLAB +",,Napari widget for BP04 Practical.,>=3.9,"['napari[all]==0.5.0', 'numpy', 'magicgui', 'qtpy', 'scipy', 'pyqtgraph', 'picassosr==0.7.3', 'matplotlib', 'tqdm', 'pyqt5-tools', 'trackpy', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# napari-SMLMLAB [![License BSD-3](https://img.shields.io/pypi/l/napari-SMLMLAB.svg?color=green)](https://github.com/piedrro/napari-SMLMLAB/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-SMLMLAB.svg?color=green)](https://pypi.org/project/napari-SMLMLAB) @@ -33479,7 +34714,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Framework :: napari', 'Environment :: Plugins', 'License :: OSI Approved :: BSD License', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent']","['Homepage, https://github.com/piedrro/napari-bacseg', 'Bug Tracker, https://github.com/piedrro/napari-bacseg/issues']",,,napari-SMLMLAB.make_qwidget,,,,,https://pypi.org/project/napari-SMLMLAB,, -333,Napari Solarized,0.1.1,2023-03-30,2023-06-18,napari-solarized,Ashley Anderson,aandersoniii@chanzuckerberg.com,MIT,https://github.com/aganders3/napari-solarized,Solarized themes for napari,>=3.8,"[""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""npe2 ; extra == 'testing'"", ""typer ; extra == 'testing'"", ""importlib-resources ; extra == 'testing'""]","# napari-solarized +348,Napari Solarized,0.1.1,2023-03-30,2023-06-18,napari-solarized,Ashley Anderson,aandersoniii@chanzuckerberg.com,MIT,https://github.com/aganders3/napari-solarized,Solarized themes for napari,>=3.8,"[""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""npe2 ; extra == 'testing'"", ""typer ; extra == 'testing'"", ""importlib-resources ; extra == 'testing'""]","# napari-solarized Solarized (-ish) themes for napari, based on [solarized](https://ethanschoonover.com/solarized/). @@ -33540,7 +34775,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Mozilla Public License 2.0 (MPL 2.0)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/aganders3/napari-solarized/issues', 'Documentation, https://github.com/aganders3/napari-solarized#README.md', 'Source Code, https://github.com/aganders3/napari-solarized', 'User Support, https://github.com/aganders3/napari-solarized/issues']",,,,,,,,https://pypi.org/project/napari-solarized,https://github.com/aganders3/napari-solarized, -334,napari-spacetx-explorer,0.1.8,2022-02-10,2023-06-18,napari-spacetx-explorer,Sebastian Gonzalez-Tirado,sebastian.gonzalez@embl.de,BSD-3,https://github.com/sebgoti/napari-spacetx-explorer,visualizer for spatial omic data,>=3.7,"['napari', 'napari-plugin-engine (>=0.1.4)', 'numpy', 'pandas']","# napari-spacetx-explorer +349,napari-spacetx-explorer,0.1.8,2022-02-10,2023-06-18,napari-spacetx-explorer,Sebastian Gonzalez-Tirado,sebastian.gonzalez@embl.de,BSD-3,https://github.com/sebgoti/napari-spacetx-explorer,visualizer for spatial omic data,>=3.7,"['napari', 'napari-plugin-engine (>=0.1.4)', 'numpy', 'pandas']","# napari-spacetx-explorer [![License](https://img.shields.io/pypi/l/napari-spacetx-explorer.svg?color=green)](https://github.com/sebgoti/napari-spacetx-explorer/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-spacetx-explorer.svg?color=green)](https://pypi.org/project/napari-spacetx-explorer) @@ -33627,7 +34862,7 @@ If you encounter any problems or would like some support, please [file an issue] ","['Development Status :: 3 - Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/sebgoti/napari-spacetx-explorer/issues', 'Documentation, https://github.com/sebgoti/napari-spacetx-explorer#README.md', 'Source Code, https://github.com/sebgoti/napari-spacetx-explorer', 'User Support, https://github.com/sebgoti/napari-spacetx-explorer/issues']",napari-spacetx-explorer.napari_get_reader,,napari-spacetx-explorer.napari_experimental_provide_function,,['*'],,,https://pypi.org/project/napari-spacetx-explorer,https://github.com/sebgoti/napari-spacetx-explorer, -335,Spatial Correlation Plotter,0.0.3,,,napari-spatial-correlation-plotter,Jules Vanaret,jules.vanaret@univ-amu.fr,MIT,,A plugin to compute and display spatial correlation histograms in Napari,>=3.8,"['numpy', 'magicgui', 'matplotlib', 'scikit-image', 'qtpy', 'pyclesperanto-prototype', 'tapenade', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# :herb: napari-spatial-correlation-plotter +350,Spatial Correlation Plotter,0.0.3,,,napari-spatial-correlation-plotter,Jules Vanaret,jules.vanaret@univ-amu.fr,MIT,,A plugin to compute and display spatial correlation histograms in Napari,>=3.8,"['numpy', 'magicgui', 'matplotlib', 'scikit-image', 'qtpy', 'pyclesperanto-prototype', 'tapenade', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# :herb: napari-spatial-correlation-plotter [![License MIT](https://img.shields.io/pypi/l/napari-spatial-correlation-plotter.svg?color=green)](https://github.com/jules-vanaret/napari-spatial-correlation-plotter/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-spatial-correlation-plotter.svg?color=green)](https://pypi.org/project/napari-spatial-correlation-plotter) @@ -33736,7 +34971,7 @@ This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookie [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/jules-vanaret/napari-spatial-correlation-plotter/issues', 'Documentation, https://github.com/jules-vanaret/napari-spatial-correlation-plotter#README.md', 'Source Code, https://github.com/jules-vanaret/napari-spatial-correlation-plotter', 'User Support, https://github.com/jules-vanaret/napari-spatial-correlation-plotter/issues']",,,napari-spatial-correlation-plotter.make_widget,,,,,https://pypi.org/project/napari-spatial-correlation-plotter,, -336,napari-spatial-omics,0.0.8,2022-02-13,2023-06-18,napari-spatial-omics,Sebastian Gonzalez-Tirado,sebgoti8@gmail.com,BSD-3-Clause,https://github.com/sebgoti/napari-spatial-omics,A simple plugin to visualize spatial omic data stored in CSV format,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'pandas']","# napari-spatial-omics +351,napari-spatial-omics,0.0.8,2022-02-13,2023-06-18,napari-spatial-omics,Sebastian Gonzalez-Tirado,sebgoti8@gmail.com,BSD-3-Clause,https://github.com/sebgoti/napari-spatial-omics,A simple plugin to visualize spatial omic data stored in CSV format,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'pandas']","# napari-spatial-omics [![License](https://img.shields.io/pypi/l/napari-spatial-omics.svg?color=green)](https://github.com/sebgoti/napari-spatial-omics/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-spatial-omics.svg?color=green)](https://pypi.org/project/napari-spatial-omics) @@ -33806,7 +35041,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/sebgoti/napari-spatial-omics/issues', 'Documentation, https://github.com/sebgoti/napari-spatial-omics#README.md', 'Source Code, https://github.com/sebgoti/napari-spatial-omics', 'User Support, https://github.com/sebgoti/napari-spatial-omics/issues']",napari-spatial-omics.napari_get_reader,,napari-spatial-omics.example_magic_widget,,['*'],,,https://pypi.org/project/napari-spatial-omics,https://github.com/sebgoti/napari-spatial-omics, -337,napari spatialdata,0.5.3,2022-08-18,2024-09-27,napari-spatialdata,giovanni palla,giov.pll@gmail.com,BSD-3-Clause,https://github.com/scverse/napari-spatialdata.git,Interactive visualization of spatial omics data with napari,>=3.9.2,"['anndata', 'click', 'cycler', 'dask>=2024.4.1', 'geopandas', 'loguru', 'matplotlib', 'napari>=0.4.19.post1', 'napari-matplotlib', 'numba', 'numpy', 'packaging', 'pandas', 'pillow', 'qtpy', 'scanpy', 'scipy', 'shapely', 'scikit-learn', 'spatialdata>=0.2.1', 'superqt', 'typing-extensions>=4.8.0', 'vispy', 'xarray', 'xarray-datatree', 'napari[pyqt5]; extra == ""all""', 'sphinx>=4.5; extra == ""doc""', 'sphinx-book-theme>=1.0.0; extra == ""doc""', 'myst-parser; extra == ""doc""', 'sphinxcontrib-bibtex>=1.0.0; extra == ""doc""', 'sphinx-autodoc-typehints>=1.11.0; extra == ""doc""', 'sphinx-autobuild; extra == ""doc""', 'scanpydoc; extra == ""doc""', 'ipykernel; extra == ""doc""', 'ipython; extra == ""doc""', 'sphinx-copybutton; extra == ""doc""', 'sphinx-qt-documentation; extra == ""doc""', 'myst-nb; extra == ""doc""', 'squidpy; extra == ""doc""', 'spatialdata>=0.1.0-pre0; extra == ""pre""', 'pydantic<2; extra == ""readthedocs""', 'loguru; extra == ""test""', 'pytest; extra == ""test""', 'pytest-cov; extra == ""test""', 'pytest-qt; extra == ""test""', 'pre-commit>=2.9.0; extra == ""test""']","![SpatialData banner](https://github.com/scverse/spatialdata/blob/main/docs/_static/img/spatialdata_horizontal.png?raw=true) +352,napari spatialdata,0.5.4.post0,2022-08-18,2024-09-27,napari-spatialdata,giovanni palla,giov.pll@gmail.com,BSD-3-Clause,https://github.com/scverse/napari-spatialdata.git,Interactive visualization of spatial omics data with napari,>=3.10,"['anndata', 'click', 'cycler', 'dask>=2024.4.1', 'geopandas', 'loguru', 'matplotlib', 'napari>=0.4.19.post1', 'napari-matplotlib', 'numba', 'numpy', 'packaging', 'pandas', 'pillow', 'qtpy', 'scanpy', 'scipy', 'shapely', 'scikit-learn', 'spatialdata>=0.2.6', 'superqt', 'typing_extensions>=4.8.0', 'vispy', 'xarray', 'xarray-datatree', 'loguru; extra == ""test""', 'pytest; extra == ""test""', 'pytest-cov; extra == ""test""', 'pytest-qt; extra == ""test""', 'pre-commit>=2.9.0; extra == ""test""', 'sphinx>=4.5; extra == ""doc""', 'sphinx-book-theme>=1.0.0; extra == ""doc""', 'myst-parser; extra == ""doc""', 'sphinxcontrib-bibtex>=1.0.0; extra == ""doc""', 'sphinx-autodoc-typehints>=1.11.0; extra == ""doc""', 'sphinx-autobuild; extra == ""doc""', 'scanpydoc; extra == ""doc""', 'ipykernel; extra == ""doc""', 'ipython; extra == ""doc""', 'sphinx-copybutton; extra == ""doc""', 'sphinx-qt-documentation; extra == ""doc""', 'myst-nb; extra == ""doc""', 'squidpy; extra == ""doc""', 'pydantic<2; extra == ""readthedocs""', 'spatialdata>=0.1.0-pre0; extra == ""pre""', 'napari[pyqt5]; extra == ""all""']","![SpatialData banner](https://github.com/scverse/spatialdata/blob/main/docs/_static/img/spatialdata_horizontal.png?raw=true) # napari-spatialdata: interactive exploration and annotation of spatial omics data @@ -33819,7 +35054,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-spatialdata)](https://napari-hub.org/plugins/napari-spatialdata) [![DOI](https://zenodo.org/badge/477021400.svg)](https://zenodo.org/badge/latestdoi/477021400) -This repository contains a napari plugin for interactively exploring and annotating SpatialData objects. `napari-spatialdata` is part of the `SpatialData` ecosystem. To learn more about SpatialData, please see the [documentation](https://spatialdata.scverse.org/). +This repository contains a napari plugin for interactively exploring and annotating SpatialData objects. Here you can find the [napari-spatialdata documentation](https://spatialdata.scverse.org/projects/napari/en/latest/notebooks/spatialdata.html). `napari-spatialdata` is part of the `SpatialData` ecosystem. To learn more about SpatialData, please see the [spatialdata documentation](https://spatialdata.scverse.org/). ## Installation @@ -33889,8 +35124,172 @@ Marconato, L., Palla, G., Yamauchi, K.A. et al. SpatialData: an open and univers [pip]: https://pypi.org/project/pip/ [pypi]: https://pypi.org/ [issue]: https://github.com/scverse/napari-spatialdata/issues -","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/scverse/napari-spatialdata/issues', 'Documentation, https://spatialdata.scverse.org/projects/napari/en/latest/notebooks/spatialdata.html', 'Source Code, https://github.com/scverse/napari-spatialdata', 'User Support, https://github.com/scverse/napari-spatialdata/issues']",napari-spatialdata.get_reader,,napari-spatialdata.QtAdataScatterWidget,,['*.zarr'],,,https://pypi.org/project/napari-spatialdata,https://github.com/scverse/napari-spatialdata.git, -338,SplineDist,0.3.1,2023-11-18,2023-11-18,napari-splinedist,Dr. Thorsten Beier,derthorstebeier@gmail.com,MIT,https://pypi.org/project/napari-splinedist,A napari SplineDist plugin,>=3.8,"['pydantic', 'numpy', 'magicgui', 'qtpy', 'stardist (>=0.8.3)', 'splinedist (>=0.1.2)', 'napari-splineit (>=0.3.0)', 'requests', 'tensorflow', 'opencv-python-headless', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-splinedist +","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/scverse/napari-spatialdata/issues', 'Documentation, https://spatialdata.scverse.org/projects/napari/en/latest/notebooks/spatialdata.html', 'Source Code, https://github.com/scverse/napari-spatialdata', 'User Support, https://github.com/scverse/napari-spatialdata/issues']",napari-spatialdata.get_reader,,napari-spatialdata.QtAdataScatterWidget,,['*.zarr'],,,https://pypi.org/project/napari-spatialdata,https://github.com/scverse/napari-spatialdata.git, +353,single particle,0.1.0,,,napari-spfluo,Jean Plumail,Jean Plumail ,MIT,,A plugin to use spfluo within napari,>=3.8,"['magicgui', 'numpy', 'qtpy', 'scikit-image', 'spfluo[ab-initio-reconstruction]']","# napari-spfluo + +[![License MIT](https://img.shields.io/pypi/l/napari-spfluo.svg?color=green)](https://github.com/jplumail/napari-spfluo/raw/main/LICENSE) +[![PyPI](https://img.shields.io/pypi/v/napari-spfluo.svg?color=green)](https://pypi.org/project/napari-spfluo) +[![Python Version](https://img.shields.io/pypi/pyversions/napari-spfluo.svg?color=green)](https://python.org) +[![tests](https://github.com/jplumail/napari-spfluo/workflows/tests/badge.svg)](https://github.com/jplumail/napari-spfluo/actions) +[![codecov](https://codecov.io/gh/jplumail/napari-spfluo/branch/main/graph/badge.svg)](https://codecov.io/gh/jplumail/napari-spfluo) +[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-spfluo)](https://napari-hub.org/plugins/napari-spfluo) + +A plugin to use spfluo within napari + +---------------------------------- + +This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template. + + + +## Installation + +You can install `napari-spfluo` via [pip]: + + pip install napari-spfluo + + + +To install latest development version : + + pip install git+https://github.com/jplumail/napari-spfluo.git + + +## Contributing + +Contributions are very welcome. Tests can be run with [tox], please ensure +the coverage at least stays the same before you submit a pull request. + +## License + +Distributed under the terms of the [MIT] license, +""napari-spfluo"" is free and open source software + +## Issues + +If you encounter any problems, please [file an issue] along with a detailed description. + +[napari]: https://github.com/napari/napari +[Cookiecutter]: https://github.com/audreyr/cookiecutter +[@napari]: https://github.com/napari +[MIT]: http://opensource.org/licenses/MIT +[BSD-3]: http://opensource.org/licenses/BSD-3-Clause +[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt +[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt +[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0 +[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt +[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin + +[file an issue]: https://github.com/jplumail/napari-spfluo/issues + +[napari]: https://github.com/napari/napari +[tox]: https://tox.readthedocs.io/en/latest/ +[pip]: https://pypi.org/project/pip/ +[PyPI]: https://pypi.org/ +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/jplumail/napari-spfluo/issues', 'Documentation, https://github.com/jplumail/napari-spfluo#README.md', 'Homepage, https://github.com/jplumail/napari-spfluo', 'Source Code, https://github.com/jplumail/napari-spfluo', 'User Support, https://github.com/jplumail/napari-spfluo/issues']",,,napari-spfluo.make_ab_initio_widget,napari-spfluo.make_generated_anisotropic,,,,https://pypi.org/project/napari-spfluo,, +354,splinebox,0.0.3a0,,,napari-splinebox,Florian Aymanns,florian.aymanns@epfl.ch," +Copyright (c) 2024, Florian Aymanns +All rights reserved. + +Redistribution and use in source and binary forms, with or without +modification, are permitted provided that the following conditions are met: + +* Redistributions of source code must retain the above copyright notice, this + list of conditions and the following disclaimer. + +* Redistributions in binary form must reproduce the above copyright notice, + this list of conditions and the following disclaimer in the documentation + and/or other materials provided with the distribution. + +* Neither the name of copyright holder nor the names of its + contributors may be used to endorse or promote products derived from + this software without specific prior written permission. + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ""AS IS"" +AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE +IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE +DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE +FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL +DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR +SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER +CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, +OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE +OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. +",,A plugin to create splines with napari.,>=3.9,"['numpy', 'magicgui', 'qtpy', 'splinebox', 'pandas', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# napari-splinebox + +[![License BSD-3](https://img.shields.io/pypi/l/napari-splinebox.svg?color=green)](https://github.com/EPFL-Center-for-Imaging/napari-splinebox/raw/main/LICENSE) +[![PyPI](https://img.shields.io/pypi/v/napari-splinebox.svg?color=green)](https://pypi.org/project/napari-splinebox) +[![Python Version](https://img.shields.io/pypi/pyversions/napari-splinebox.svg?color=green)](https://python.org) +[![tests](https://github.com/EPFL-Center-for-Imaging/napari-splinebox/workflows/tests/badge.svg)](https://github.com/EPFL-Center-for-Imaging/napari-splinebox/actions) +[![codecov](https://codecov.io/gh/EPFL-Center-for-Imaging/napari-splinebox/branch/main/graph/badge.svg)](https://codecov.io/gh/EPFL-Center-for-Imaging/napari-splinebox) +[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-splinebox)](https://napari-hub.org/plugins/napari-splinebox) + +A plugin to create splines with napari. + +---------------------------------- + +This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template. + + + +## Installation + +You can install `napari-splinebox` via [pip]: + + pip install napari-splinebox + + + +To install latest development version : + + pip install git+https://github.com/EPFL-Center-for-Imaging/napari-splinebox.git + + +## Contributing + +Contributions are very welcome. Tests can be run with [tox], please ensure +the coverage at least stays the same before you submit a pull request. + +## License + +Distributed under the terms of the [BSD-3] license, +""napari-splinebox"" is free and open source software + +## Issues + +If you encounter any problems, please [file an issue] along with a detailed description. + +[napari]: https://github.com/napari/napari +[Cookiecutter]: https://github.com/audreyr/cookiecutter +[@napari]: https://github.com/napari +[MIT]: http://opensource.org/licenses/MIT +[BSD-3]: http://opensource.org/licenses/BSD-3-Clause +[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt +[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt +[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0 +[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt +[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin + +[file an issue]: https://github.com/EPFL-Center-for-Imaging/napari-splinebox/issues + +[napari]: https://github.com/napari/napari +[tox]: https://tox.readthedocs.io/en/latest/ +[pip]: https://pypi.org/project/pip/ +[PyPI]: https://pypi.org/ +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/EPFL-Center-for-Imaging/napari-splinebox/issues', 'Documentation, https://github.com/EPFL-Center-for-Imaging/napari-splinebox#README.md', 'Source Code, https://github.com/EPFL-Center-for-Imaging/napari-splinebox', 'User Support, https://github.com/EPFL-Center-for-Imaging/napari-splinebox/issues']",,,napari-splinebox.make_container_widget,,,,,https://pypi.org/project/napari-splinebox,, +355,SplineDist,0.3.1,2023-11-18,2023-11-18,napari-splinedist,Dr. Thorsten Beier,derthorstebeier@gmail.com,MIT,https://pypi.org/project/napari-splinedist,A napari SplineDist plugin,>=3.8,"['pydantic', 'numpy', 'magicgui', 'qtpy', 'stardist (>=0.8.3)', 'splinedist (>=0.1.2)', 'napari-splineit (>=0.3.0)', 'requests', 'tensorflow', 'opencv-python-headless', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-splinedist [![License MIT](https://img.shields.io/pypi/l/napari-splinedist.svg?color=green)](https://github.com/DerThorsten/napari-splinedist/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-splinedist.svg?color=green)](https://pypi.org/project/napari-splinedist) @@ -33958,7 +35357,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/DerThorsten/napari-splinedist/issues', 'Documentation, https://github.com/DerThorsten/napari-splinedist#README.md', 'Source Code, https://github.com/DerThorsten/napari-splinedist', 'User Support, https://github.com/DerThorsten/napari-splinedist/issues']",,,napari-splinedist.make_qwidget,napari-splinedist.sample_data_bbbc038,,,,https://pypi.org/project/napari-splinedist,, -339,Napari SplineIt2,0.3.0,2022-07-11,2023-06-18,napari-splineit,Thorsten Beier,derthorstenbeier@gmail.com,BSD-3-Clause,https://github.com/uhlmanngroup/napari-splineit,A napari plugin for spline manipulation,>=3.7,"['numpy', 'qtpy', 'scikit-image', 'scipy', ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]","# napari-splineit +356,Napari SplineIt2,0.3.0,2022-07-11,2023-06-18,napari-splineit,Thorsten Beier,derthorstenbeier@gmail.com,BSD-3-Clause,https://github.com/uhlmanngroup/napari-splineit,A napari plugin for spline manipulation,>=3.7,"['numpy', 'qtpy', 'scikit-image', 'scipy', ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]","# napari-splineit [![License](https://img.shields.io/pypi/l/napari-splineit.svg?color=green)](https://github.com/uhlmanngroup/napari-splineit/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-splineit.svg?color=green)](https://pypi.org/project/napari-splineit) @@ -34026,7 +35425,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['Bug Tracker, https://github.com/uhlmanngroup/napari-splineit/issues', 'Documentation, https://github.com/uhlmanngroup/napari-splineit#README.md', 'Source Code, https://github.com/uhlmanngroup/napari-splineit', 'User Support, https://github.com/uhlmanngroup/napari-splineit/issues']",napari-splineit.read_splineit,napari-splineit.write_splineit_json,napari-splineit.make_qwidget,napari-splineit.make_sample_data_coins,['*.splineit'],['.splineit'],,https://pypi.org/project/napari-splineit,https://github.com/uhlmanngroup/napari-splineit, -340,Spot Finder,0.0.1,,,napari-spofi,Christian Schulze,drchrisch@gmail.com,BSD-3-Clause,,napari plugin to interactively train and test a StarDist model,>=3.8,"['numpy', 'pandas', 'magicgui', 'qtpy', 'scikit-image', 'pyclesperanto', 'tensorflow', 'stardist', ""tox ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-spofi +357,Spot Finder,0.0.1,,,napari-spofi,Christian Schulze,drchrisch@gmail.com,BSD-3-Clause,,napari plugin to interactively train and test a StarDist model,>=3.8,"['numpy', 'pandas', 'magicgui', 'qtpy', 'scikit-image', 'pyclesperanto', 'tensorflow', 'stardist', ""tox ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-spofi [![License BSD-3](https://img.shields.io/pypi/l/napari-spofi.svg?color=green)](https://github.com/githubuser/napari-spofi/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-spofi.svg?color=green)](https://pypi.org/project/napari-spofi) @@ -34146,7 +35545,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Visualization']","['Bug Tracker, https://github.com/drchrisch/napari-spofi/issues', 'Documentation, https://github.com/drchrisch/napari-spofi#README.md', 'Source Code, https://github.com/drchrisch/napari-spofi', 'User Support, https://github.com/drchrisch/napari-spofi/issues']",,,napari-spofi.widget,,,,,https://pypi.org/project/napari-spofi,, -341,napari-spotiflow,0.3.2,,,napari-spotiflow,"Albert Dominguez Mantes, Martin Weigert","albert.dominguezmantes@epfl.ch, martin.weigert@epfl.ch",BSD 3-Clause,,Napari plugin for Spotiflow,"<3.12,>=3.9","['spotiflow', 'npe2', 'napari']","[![License: BSD-3](https://img.shields.io/badge/License-BSD3-blue.svg)](https://www.gnu.org/licenses/bsd3) +358,napari-spotiflow,0.3.4,,,napari-spotiflow,"Albert Dominguez Mantes, Martin Weigert","albert.dominguezmantes@epfl.ch, martin.weigert@epfl.ch",BSD 3-Clause,,Napari plugin for Spotiflow,"<3.13,>=3.9","['spotiflow', 'npe2', 'napari>=0.5']","[![License: BSD-3](https://img.shields.io/badge/License-BSD3-blue.svg)](https://www.gnu.org/licenses/bsd3) [![PyPI](https://img.shields.io/pypi/v/napari-spotiflow.svg?color=green)](https://pypi.org/project/napari-spotiflow) [![Python Version](https://img.shields.io/pypi/pyversions/napari-spotiflow.svg?color=green)](https://python.org) [![tests](https://github.com/weigertlab/napari-spotiflow/workflows/tests/badge.svg)](https://github.com/weigertlab/napari-spotiflow/actions) @@ -34158,7 +35557,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc # Spotiflow: napari plugin -Napari plugin for *Spotiflow*, a deep learning-based, threshold-agnostic, and subpixel-accurate spot detection method for fluorescence microscopy. The plugin allows using several pre-trained models as well as user-trained ones. For the main repository, see [here](https://github.com/weigertlab/spotiflow). +Napari plugin for *Spotiflow*, a deep learning-based, threshold-agnostic, and subpixel-accurate spot detection method for 2D and 3D fluorescence microscopy images. The plugin allows using several pre-trained models as well as user-trained ones. For the main repository, see [here](https://github.com/weigertlab/spotiflow). https://github.com/weigertlab/napari-spotiflow/assets/11042162/02940480-daa9-4a21-8cf5-ad73c26c9838 @@ -34184,11 +35583,13 @@ pip install napari-spotiflow ## Supported input formats - 2D (YX, YXC or CYX) - 2D+t (TYX, TYXC or TCYX) +- 3D (ZYX, ZYXC or CZYX) +- 3D+t (TZYX, TZYXC or TCZYX) ## How to cite See the [main repository's _How to cite_ section](https://github.com/weigertlab/spotiflow?tab=readme-ov-file#how-to-cite). -","['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/weigertlab/napari-spotiflow/issues', 'Documentation, https://github.com/weigertlab/napari-spotiflow#README.md', 'Source Code, https://github.com/weigertlab/napari-spotiflow', 'User Support, https://github.com/weigertlab/napari-spotiflow/issues']",napari-spotiflow.reader,,napari-spotiflow.widget,napari-spotiflow.data.hybiss_2d,['*.csv'],,,https://pypi.org/project/napari-spotiflow,, -342,Spreadsheet,0.0.4,2023-12-08,2023-12-08,napari-spreadsheet,Hanjin Liu,liuhanjin-sc@g.ecc.u-tokyo.ac.jp,BSD-3-Clause,https://pypi.org/project/napari-spreadsheet,A spreadsheet widget for napari,>=3.8,"['magicgui', 'napari', 'numpy', 'pandas', 'qtpy', 'tabulous (>=0.5.0)', ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]","# napari-spreadsheet +","['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/weigertlab/napari-spotiflow/issues', 'Documentation, https://github.com/weigertlab/napari-spotiflow#README.md', 'Source Code, https://github.com/weigertlab/napari-spotiflow', 'User Support, https://github.com/weigertlab/napari-spotiflow/issues']",napari-spotiflow.reader,,napari-spotiflow.widget,napari-spotiflow.data.hybiss_2d,['*.csv'],,,https://pypi.org/project/napari-spotiflow,, +359,Spreadsheet,0.0.4,2023-12-08,2023-12-08,napari-spreadsheet,Hanjin Liu,liuhanjin-sc@g.ecc.u-tokyo.ac.jp,BSD-3-Clause,https://pypi.org/project/napari-spreadsheet,A spreadsheet widget for napari,>=3.8,"['magicgui', 'napari', 'numpy', 'pandas', 'qtpy', 'tabulous (>=0.5.0)', ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]","# napari-spreadsheet [![License BSD-3](https://img.shields.io/pypi/l/napari-spreadsheet.svg?color=green)](https://github.com/hanjinliu/napari-spreadsheet/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-spreadsheet.svg?color=green)](https://pypi.org/project/napari-spreadsheet) @@ -34266,7 +35667,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/hanjinliu/napari-spreadsheet/issues', 'Documentation, https://github.com/hanjinliu/napari-spreadsheet#README.md', 'Source Code, https://github.com/hanjinliu/napari-spreadsheet', 'User Support, https://github.com/hanjinliu/napari-spreadsheet/issues']",napari-spreadsheet.read_table_data,,napari-spreadsheet.make_qwidget,,"['*.txt', '*.dat', '*.csv', '*.xlsx']",,,https://pypi.org/project/napari-spreadsheet,, -343,Stable Diffusion,0.1.1,2023-04-17,2023-07-25,napari-stable-diffusion,Kyle Harrington,napari@kyleharrington.com,BSD-3-Clause,https://github.com/kephale/napari-stable-diffusion,A demo of stable diffusion in napari,>=3.8,"['napari', 'napari-plugin-engine (>=0.1.4)', 'numpy', 'magicgui', 'qtpy', 'diffusers', 'transformers', 'torch', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-stable-diffusion +360,Stable Diffusion,0.1.1,2023-04-17,2023-07-25,napari-stable-diffusion,Kyle Harrington,napari@kyleharrington.com,BSD-3-Clause,https://github.com/kephale/napari-stable-diffusion,A demo of stable diffusion in napari,>=3.8,"['napari', 'napari-plugin-engine (>=0.1.4)', 'numpy', 'magicgui', 'qtpy', 'diffusers', 'transformers', 'torch', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-stable-diffusion [![License BSD-3](https://img.shields.io/pypi/l/napari-stable-diffusion.svg?color=green)](https://github.com/kephale/napari-stable-diffusion/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-stable-diffusion.svg?color=green)](https://pypi.org/project/napari-stable-diffusion) @@ -34362,7 +35763,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/kephale/napari-stable-diffusion/issues', 'Documentation, https://github.com/kephale/napari-stable-diffusion#README.md', 'Source Code, https://github.com/kephale/napari-stable-diffusion', 'User Support, https://github.com/kephale/napari-stable-diffusion/issues']",,,napari-stable-diffusion.make_qwidget,,,,,https://pypi.org/project/napari-stable-diffusion,https://github.com/kephale/napari-stable-diffusion, -344,napari Steinpose,0.1.0,2023-12-09,2023-12-09,napari-steinpose,Guillaume Witz,guillaume.witz@unibe.ch,BSD-3-Clause,https://pypi.org/project/napari-steinpose,A plugin to process Imaging Mass Cytometry data with cellpose and steinbock,>=3.8,"['torch (==1.11.0)', 'cellpose', 'numpy', 'magicgui', 'qtpy', 'matplotlib', 'readimc', 'steinbock', 'pandas', 'aicsimageio', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest-order ; extra == 'testing'""]","# napari-steinpose +361,napari Steinpose,0.1.0,2023-12-09,2023-12-09,napari-steinpose,Guillaume Witz,guillaume.witz@unibe.ch,BSD-3-Clause,https://pypi.org/project/napari-steinpose,A plugin to process Imaging Mass Cytometry data with cellpose and steinbock,>=3.8,"['torch (==1.11.0)', 'cellpose', 'numpy', 'magicgui', 'qtpy', 'matplotlib', 'readimc', 'steinbock', 'pandas', 'aicsimageio', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest-order ; extra == 'testing'""]","# napari-steinpose [![License BSD-3](https://img.shields.io/pypi/l/napari-steinpose.svg?color=green)](https://github.com/guiwitz/napari-steinpose/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-steinpose.svg?color=green)](https://pypi.org/project/napari-steinpose) @@ -34481,7 +35882,64 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/guiwitz/napari-steinpose/issues', 'Documentation, https://github.com/guiwitz/napari-steinpose#README.md', 'Source Code, https://github.com/guiwitz/napari-steinpose', 'User Support, https://github.com/guiwitz/napari-steinpose/issues']",napari-steinpose.get_reader,,napari-steinpose.make_qwidget,,['*.mcd'],,,https://pypi.org/project/napari-steinpose,, -345,napari-stl-exporter,0.1.5,2022-02-02,2023-07-25,napari-stl-exporter,Johannes Soltwedel,johannes_richard.soltwedel@tu-dresden.de,BSD-3-Clause,https://github.com/jo-mueller/napari-stl-exporter,Exports label images to 3D-printable stl files.,>=3.7,"['napari', 'scikit-image', 'vedo (>=2023.4.6)', 'npe2', 'numpy']","# napari-stl-exporter +362,napari-stitcher,0.1.0,,,napari-stitcher,Marvin Albert,marvin.albert@gmail.com,BSD-3-Clause,,Stitch napari image layers in 2-3D+t,>=3.9,"['numpy>=1.18', 'magicgui', 'qtpy', 'tifffile>=2022.7.28', 'multiview-stitcher[aicsimageio]==0.1.14', 'spatial-image==0.3.0', 'multiscale-spatial-image==0.11.2', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""', 'tox; extra == ""testing-no-gui""', 'pytest; extra == ""testing-no-gui""', 'pytest-cov; extra == ""testing-no-gui""', 'pytest-qt; extra == ""testing-no-gui""']","[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-stitcher)](https://napari-hub.org/plugins/napari-stitcher) +[![License {{cookiecutter.license}}](https://img.shields.io/pypi/l/napari-stitcher.svg?color=green)](https://github.com/multiview-stitcher/napari-stitcher/raw/main/LICENSE) +[![PyPI](https://img.shields.io/pypi/v/napari-stitcher.svg?color=green)](https://pypi.org/project/napari-stitcher) +[![Python Version](https://img.shields.io/pypi/pyversions/napari-stitcher.svg?color=green)](https://python.org) +[![tests](https://github.com/multiview-stitcher/napari-stitcher/actions/workflows/test_and_deploy.yml/badge.svg)](https://github.com/multiview-stitcher/napari-stitcher/actions) +[![codecov](https://codecov.io/gh/multiview-stitcher/napari-stitcher/branch/main/graph/badge.svg)](https://codecov.io/gh/multiview-stitcher/napari-stitcher) +[![DOI](https://zenodo.org/badge/697999800.svg)](https://zenodo.org/doi/10.5281/zenodo.13151252) + + +# napari-stitcher + +A napari plugin for stitching large multi-positioning datasets in 2/3D+t using [`multiview-stitcher`](https://github.com/multiview-stitcher/multiview-stitcher). + +![](docs/images/napari-stitcher-loaded-mosaic-annotated.png) +Image data by Arthur Michaut @ Jérôme Gros Lab @ Institut Pasteur. + +#### Quick guide: + +1. Directly stitch napari layers: Use napari to load, visualize and [preposition](prearrangement.md) the tiles to be stitched. +2. When working with multi-channel data, stick to the following [naming convention](naming_convention.md): `{tile} :: {channel}`. +3. Load either all or just a subset of the layers into the plugin. +4. Choose registration options: registration channel, binning and more. +5. Stitching = registration (refining the positions, optional) + fusion (joining the tiles into a single image). +6. The registration result is shown in the viewer and the fused channels are added as new layers. + +## Demo + +https://github.com/user-attachments/assets/8773e49f-af18-4ff3-ab2f-2a5f1b1cadf2 + +This demo uses the awesome [`napari-threedee`](https://github.com/napari-threedee/napari-threedee) for prepositioning the tiles. Image data: [BigStitcher](https://imagej.net/plugins/bigstitcher/). + +## Documentation + +Head over to the [user guide](https://multiview-stitcher.github.io/napari-stitcher/main/) for more details. + +## Installation + +You can install `napari-stitcher` via `pip`: + +```bash +pip install napari-stitcher +``` + +For more installation options, see the [installation docs](https://multiview-stitcher.github.io/napari-stitcher/main/installation/). + +## Contributing + +Contributions are very welcome. Tests can be run with `tox`. + +## License + +Distributed under the terms of the [BSD-3] license, ""napari-stitcher"" is free and open source software + +## Issues + +If you encounter any problems, please [file an issue](https://github.com/multiview-stitcher/napari-stitcher/issues) along with a detailed description. +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/multiview-stitcher/napari-stitcher/issues', 'Documentation, https://multiview-stitcher.github.io/napari-stitcher/', 'Source Code, https://github.com/multiview-stitcher/napari-stitcher', 'User Support, https://github.com/multiview-stitcher/napari-stitcher/issues']",napari-stitcher.get_reader,napari-stitcher.write_multiple,napari-stitcher.make_qwidget,napari-stitcher.make_sample_data,['*.czi'],['.tif'],,https://pypi.org/project/napari-stitcher,, +363,napari-stl-exporter,0.1.5,2022-02-02,2023-07-25,napari-stl-exporter,Johannes Soltwedel,johannes_richard.soltwedel@tu-dresden.de,BSD-3-Clause,https://github.com/jo-mueller/napari-stl-exporter,Exports label images to 3D-printable stl files.,>=3.7,"['napari', 'scikit-image', 'vedo (>=2023.4.6)', 'npe2', 'numpy']","# napari-stl-exporter [![License](https://img.shields.io/pypi/l/napari-stl-exporter.svg?color=green)](https://github.com/jo-mueller/napari-stl-exporter/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-stl-exporter.svg?color=green)](https://pypi.org/project/napari-stl-exporter) @@ -34611,7 +36069,7 @@ If you encounter any problems, please [file an issue](https://github.com/jo-muel [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Project Site, https://github.com/jo-mueller/napari-stl-exporter', 'Report Issues, https://github.com/jo-mueller/napari-stl-exporter/issues', 'Documentation, https://pypi.org/project/napari-stl-exporter/', 'User Support, https://github.com/jo-mueller/napari-stl-exporter/issues', 'Twitter, https://twitter.com/jm_mightypirate']",napari-stl-exporter.import_surface,napari-stl-exporter.write_labels,napari-stl-exporter.convert_image_to_surface,napari-stl-exporter.make_pyramid_label,"['*.stl', '*.ply', '*.obj']","['.stl', '.ply', '.obj']","['.stl', '.ply', '.obj']",https://pypi.org/project/napari-stl-exporter,https://github.com/jo-mueller/napari-stl-exporter, -346,napari-stracking,0.1.10,2022-08-18,2023-06-18,napari-stracking,Sylvain Prigent,sylvain.prigent@inria.fr,BSD 3-Clause,https://github.com/sylvainprigent/napari-stracking,Linking and tracks analysis,>=3.8,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'stracking >=0.1.10']","# napari-stracking +364,napari-stracking,0.1.10,2022-08-18,2023-06-18,napari-stracking,Sylvain Prigent,sylvain.prigent@inria.fr,BSD 3-Clause,https://github.com/sylvainprigent/napari-stracking,Linking and tracks analysis,>=3.8,"['napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'stracking >=0.1.10']","# napari-stracking [![License](https://img.shields.io/pypi/l/napari-stracking.svg?color=green)](https://github.com/sylvainprigent/napari-stracking/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-stracking.svg?color=green)](https://pypi.org/project/napari-stracking) @@ -34671,7 +36129,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/sylvainprigent/napari-stracking/issues', 'Documentation, https://github.com/sylvainprigent/napari-stracking#README.md', 'Source Code, https://github.com/sylvainprigent/napari-stracking', 'User Support, https://github.com/sylvainprigent/napari-stracking/issues']",,,napari-stracking.SParticlesProperties,,,,,https://pypi.org/project/napari-stracking,https://github.com/sylvainprigent/napari-stracking, -347,napari-subboxer,0.0.1,2022-02-02,2023-06-18,napari-subboxer,Alister Burt,alisterburt@gmail.com,BSD-3-Clause,https://github.com/alisterburt/napari-subboxer,A napari plugin for interacting with electron cryotomograms,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari[pyqt5] (==0.4.12)', 'mrcfile', 'typer', 'eulerangles', 'starfile', 'einops', 'pydantic']","# napari-subboxer +365,napari-subboxer,0.0.1,2022-02-02,2023-06-18,napari-subboxer,Alister Burt,alisterburt@gmail.com,BSD-3-Clause,https://github.com/alisterburt/napari-subboxer,A napari plugin for interacting with electron cryotomograms,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari[pyqt5] (==0.4.12)', 'mrcfile', 'typer', 'eulerangles', 'starfile', 'einops', 'pydantic']","# napari-subboxer [![License](https://img.shields.io/pypi/l/napari-subboxer.svg?color=green)](https://github.com/alisterburt/napari-subboxer/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-subboxer.svg?color=green)](https://pypi.org/project/napari-subboxer) @@ -34747,7 +36205,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/alisterburt/napari-subboxer/issues', 'Documentation, https://github.com/alisterburt/napari-subboxer#README.md', 'Source Code, https://github.com/alisterburt/napari-subboxer', 'User Support, https://github.com/alisterburt/napari-subboxer/issues']",,,napari-subboxer.SubboxingWidget,,,,,https://pypi.org/project/napari-subboxer,https://github.com/alisterburt/napari-subboxer, -348,superres,0.1.1,2023-12-09,2023-12-09,napari-superres,rocco.dantuono@hotmail.it,rocco.dantuono@hotmail.it,BSD-3-Clause,https://pypi.org/project/napari-superres,Fluorescence Fluctuation-based Super Resolution (FF-SRM) Methods,>=3.8,"['matplotlib', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-superres +366,superres,0.1.1,2023-12-09,2023-12-09,napari-superres,rocco.dantuono@hotmail.it,rocco.dantuono@hotmail.it,BSD-3-Clause,https://pypi.org/project/napari-superres,Fluorescence Fluctuation-based Super Resolution (FF-SRM) Methods,>=3.8,"['matplotlib', 'magicgui', 'qtpy', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# napari-superres [![License BSD-3](https://img.shields.io/pypi/l/napari-superres.svg?color=green)](https://github.com/RoccoDAnt/napari-superres/blob/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-superres.svg?color=green)](https://pypi.org/project/napari-superres) @@ -34892,118 +36350,47 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/RoccoDAnt/napari-superres/issues', 'Documentation, https://github.com/RoccoDAnt/napari-superres#README.md', 'Source Code, https://github.com/RoccoDAnt/napari-superres', 'User Support, https://github.com/RoccoDAnt/napari-superres/issues']",napari-superres.get_reader,napari-superres.write_multiple,napari-superres.make_mssr_caller,,['*.npy'],,['.npy'],https://pypi.org/project/napari-superres,, -349,napari-svetlana,1.0.1,,,napari-svetlana,Clément Cazorla,clement.cazorla31@gmail.com,GPL-3.0-only,,A classification plugin for the ROIs of a segmentation mask.,>=3.9,"['napari-plugin-engine >=0.1.4', 'numpy', 'albumentations ==1.0.3', 'joblib ==1.2.0', 'light-the-torch', 'matplotlib', 'opencv-python ==4.8.1.78', 'PyQt5', 'cupy-cuda102 ==10.6.0', 'xlsxwriter', 'pandas', 'npe2', 'pooch', 'cucim ==22.6.0 ; platform_system == ""Linux""']"," # napari_svetlana - -[![License](https://img.shields.io/pypi/l/napari_svetlana.svg?color=green)](https://bitbucket.org/koopa31/napari_svetlana/src/main/LICENSE) -[![PyPI](https://img.shields.io/pypi/v/napari_svetlana.svg?color=green)](https://pypi.org/project/napari_svetlana) -[![Python Version](https://img.shields.io/pypi/pyversions/napari_svetlana.svg?color=green)](https://python.org) -[![tests](https://bitbucket.org/koopa31/napari_svetlana/workflows/tests/badge.svg)](https://bitbucket.org/koopa31/napari_svetlana/actions) -[![codecov](https://codecov.io/gh/koopa31/napari_svetlana/branch/main/graph/badge.svg)](https://codecov.io/gh/koopa31/napari_svetlana) -[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-svetlana)](https://napari-hub.org/plugins/napari-svetlana) -[![Documentation](https://readthedocs.org/projects/svetlana-documentation/badge/?version=latest)](https://svetlana-documentation.readthedocs.io/en/latest/) - -The aim of this plugin is to classify the output of a segmentation algorithm. -The inputs are : -
    -
  • A folder of raw images
    • -
  • Their segmentation masks where each ROI has its own label.
    • -
- -Svetlana can process 2D, 3D and multichannel image. If you want to use it to work on cell images, we strongly -recommend the use of [Cellpose](https://www.cellpose.org) for the segmentation part, as it provides excellent quality results and a standard output format -accepted by Svetlana (labels masks). - -If you use this plugin please cite the [paper](https://www.nature.com/articles/s41598-024-60916-8): - -Cazorla, C., Weiss, P., & Morin, R. (2024). Svetlana: a Supervised Segmentation Classifier for Napari. - -```bibtex -@article{cazorla2024svetlana, - title={Svetlana a supervised segmentation classifier for Napari}, - author={Cazorla, Cl{\'e}ment and Morin, Renaud and Weiss, Pierre}, - journal={Scientific Reports}, - volume={14}, - number={1}, - pages={11604}, - year={2024}, - publisher={Nature Publishing Group UK London} -} - -``` - +367,napari SVG,0.2.0,2020-06-03,2024-12-13,napari-svg,"Nicholas Sofroniew, napari core devs","Nicholas Sofroniew , napari core devs ",BSD-3,https://github.com/napari/napari-svg,A plugin for writing svg files with napari,>=3.9,"['imageio >=2.5.0', 'numpy >=1.16.0', 'vispy >=0.6.4', ""napari >=0.4 ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-svg -![](https://bitbucket.org/koopa31/napari_svetlana/raw/bca8788111b38d97bd172c7caac87cc488ace699/images/Videogif.gif) +[![License](https://img.shields.io/pypi/l/napari-svg.svg?color=green)](https://github.com/napari/napari-svg/raw/master/LICENSE) +[![PyPI](https://img.shields.io/pypi/v/napari-svg.svg?color=green)](https://pypi.org/project/napari-svg) +[![Python Version](https://img.shields.io/pypi/pyversions/napari-svg.svg?color=green)](https://python.org) +[![tests](https://github.com/napari/napari-svg/workflows/tests/badge.svg)](https://github.com/napari/napari-svg/actions) +[![codecov](https://codecov.io/gh/napari/napari-svg/branch/master/graph/badge.svg)](https://codecov.io/gh/napari/napari-svg) +A plugin for writing svg files with napari ---------------------------------- -This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template. +This [napari] plugin was generated with [Cookiecutter] using with [@napari]'s [cookiecutter-napari-plugin] template. ## Installation -First install Napari in a Python 3.9 Conda environment following these instructions : - -```bash -conda create -n svetlana_env python=3.9 -conda activate svetlana_env -conda install pip -python -m pip install ""napari[all]""==0.4.17 -``` - -Then, you can install `napari_svetlana` via [pip](https://pypi.org/project/napari-svetlana/), or directly from the Napari plugin manager (see Napari documentation): -```bash -pip install napari_svetlana -``` -WARNING: - -If you have a Cuda compatible GPU on your computer, some computations may be accelerated -using [Cupy](https://pypi.org/project/cupy/). Unfortunately, Cupy needs Cudatoolkit to be installed. This library can only be installed via -Conda while the plugin is a pip plugin, so it must be installed manually for the moment: -```bash -conda install cudatoolkit=10.2 -``` -Also note that the library ([Cucim](https://pypi.org/project/cucim/)) that we use to improve these performances, computing morphological operations on GPU -is unfortunately only available for Linux systems. Hence, if you are a Windows user, this installation is not necessary. - -## Tutorial - -Many advanced features are available in Svetlana, such as data augmentation or contextual information reduction, to optimize the performance of your classifier. Thus, we strongly encourage you to -check our [Youtube tutorial](https://www.youtube.com/watch?v=u_FKuHta-RE) and -our [documentation](https://svetlana-documentation.readthedocs.io/en/latest/). -A button called **TRY ON DEMO IMAGE** is available in the annotation plugin and enables you to apply the YouTube -tutorial to the same test images to learn how to use the plugin. Feel free to try it to test all the features -that Svetlana offers. - -## Similar Napari plugins +You can install `napari-svg` via [pip]: -Joel Luethi developed a similar method for objects classification called [napari feature classifier](https://www.napari-hub.org/plugins/napari-feature-classifier). -Also, [apoc](https://www.napari-hub.org/plugins/napari-accelerated-pixel-and-object-classification) by Robert Haase is available in Napari for pixels and objects classification. + pip install napari-svg ## Contributing -Contributions are very welcome. +Contributions are very welcome. Tests can be run with [tox], please ensure +the coverage at least stays the same before you submit a pull request. ## License Distributed under the terms of the [BSD-3] license, -""napari_svetlana"" is free and open source software - -## Acknowledgements - -The method was developed by [Clément Cazorla](https://koopa31.github.io/), [Renaud Morin](https://www.linkedin.com/in/renaud-morin-6a42665b/?originalSubdomain=fr) and [Pierre Weiss](https://www.math.univ-toulouse.fr/~weiss/). And the plugin was written by -Clément Cazorla. The project is co-funded by [Imactiv-3D](https://www.imactiv-3d.com/) and [CNRS](https://www.cnrs.fr/fr). +""napari-svg"" is free and open source software ## Issues -If you encounter any problems, please [file an issue](https://bitbucket.org/koopa31/napari_svetlana/issues?status=new&status=open) along with a detailed description. +If you encounter any problems, please [file an issue] along with a detailed description. [napari]: https://github.com/napari/napari [Cookiecutter]: https://github.com/audreyr/cookiecutter @@ -35015,39 +36402,83 @@ If you encounter any problems, please [file an issue](https://bitbucket.org/koop [Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0 [Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt [cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin - +[file an issue]: https://github.com/napari/napari-svg/issues [napari]: https://github.com/napari/napari [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']","['Bug Tracker, https://bitbucket.org/koopa31/napari_svetlana/issues?status=new&status=open', 'Documentation, https://svetlana-documentation.readthedocs.io/en/latest/', 'Source Code, https://bitbucket.org/koopa31/napari_svetlana/src/main/', 'User Support, https://bitbucket.org/koopa31/napari_svetlana/issues?status=new&status=open']",napari-svetlana.get_reader,napari-svetlana.write_image,napari-svetlana.Annotation,,['*.npy'],,,https://pypi.org/project/napari-svetlana,, -350,napari SVG,0.2.0,2020-06-03,2024-06-25,napari-svg,"Nicholas Sofroniew, napari core devs","Nicholas Sofroniew , napari core devs ",BSD-3,https://github.com/napari/napari-svg,A plugin for writing svg files with napari,>=3.9,"['imageio >=2.5.0', 'numpy >=1.16.0', 'vispy >=0.6.4', ""napari >=0.4 ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-svg +","['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Source, https://github.com/napari/napari-svg', 'Bug Tracker, https://github.com/napari/napari-svg/issues']",,napari-svg.svg_writer,,,,['.svg'],,https://pypi.org/project/napari-svg,https://github.com/napari/napari-svg, +368,napari-swc-reader,0.1.3,,,napari-swc-reader,Clément Caporal,caporal.clement@gmail.com," +Copyright (c) 2024, Clément Caporal +All rights reserved. -[![License](https://img.shields.io/pypi/l/napari-svg.svg?color=green)](https://github.com/napari/napari-svg/raw/master/LICENSE) -[![PyPI](https://img.shields.io/pypi/v/napari-svg.svg?color=green)](https://pypi.org/project/napari-svg) -[![Python Version](https://img.shields.io/pypi/pyversions/napari-svg.svg?color=green)](https://python.org) -[![tests](https://github.com/napari/napari-svg/workflows/tests/badge.svg)](https://github.com/napari/napari-svg/actions) -[![codecov](https://codecov.io/gh/napari/napari-svg/branch/master/graph/badge.svg)](https://codecov.io/gh/napari/napari-svg) +Redistribution and use in source and binary forms, with or without +modification, are permitted provided that the following conditions are met: + +* Redistributions of source code must retain the above copyright notice, this + list of conditions and the following disclaimer. + +* Redistributions in binary form must reproduce the above copyright notice, + this list of conditions and the following disclaimer in the documentation + and/or other materials provided with the distribution. + +* Neither the name of copyright holder nor the names of its + contributors may be used to endorse or promote products derived from + this software without specific prior written permission. + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ""AS IS"" +AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE +IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE +DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE +FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL +DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR +SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER +CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, +OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE +OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. +",,A simple napari plugin to load swc file to napari viewer,>=3.9,"['numpy', 'pandas', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""']","# napari-swc-reader + +[![License BSD-3](https://img.shields.io/pypi/l/napari-swc-reader.svg?color=green)](https://github.com/LaboratoryOpticsBiosciences/napari-swc-reader/raw/main/LICENSE) +[![PyPI](https://img.shields.io/pypi/v/napari-swc-reader.svg?color=green)](https://pypi.org/project/napari-swc-reader) +[![Python Version](https://img.shields.io/pypi/pyversions/napari-swc-reader.svg?color=green)](https://python.org) +[![tests](https://github.com/LaboratoryOpticsBiosciences/napari-swc-reader/workflows/tests/badge.svg)](https://github.com/LaboratoryOpticsBiosciences/napari-swc-reader/actions) +[![codecov](https://codecov.io/gh/LaboratoryOpticsBiosciences/napari-swc-reader/branch/main/graph/badge.svg)](https://codecov.io/gh/LaboratoryOpticsBiosciences/napari-swc-reader) +[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-swc-reader)](https://napari-hub.org/plugins/napari-swc-reader) + +A minimal napari plugin to load swc file to napari viewer. + +![image](https://github.com/user-attachments/assets/1c9e5788-0e74-48ab-be0b-0fb74b35192c) -A plugin for writing svg files with napari ---------------------------------- -This [napari] plugin was generated with [Cookiecutter] using with [@napari]'s [cookiecutter-napari-plugin] template. +This [napari] plugin was generated with [copier] using the [napari-plugin-template]. - +- Load swc file(s) to napari viewer +- Display swc file(s) in napari viewer as points layers and lines layers +- Size of points and lines are using the radius of the swc file +- You can load an example swc from https://neuromorpho.org/dableFiles/jacobs/CNG%20version/204-2-6nj.CNG.swc or load it under `File` -> `Open Sample` -> `napari-swc-reader` + +**Limitations:** +- Only support swc file(s) following specs http://www.neuronland.org/NLMorphologyConverter/MorphologyFormats/SWC/Spec.html 7 columns +- Cannot write swc file(s) to disk but you can access the raw swc data from the napari layers from `metadata` attribute with key `raw_swc` + +**Roadmap:** +- Switch to use `napari.layers.Graph` [when it is available](https://github.com/napari/napari/issues/4274) ## Installation -You can install `napari-svg` via [pip]: +You can install `napari-swc-reader` via [pip]: + + pip install napari-swc-reader + + +To install latest development version : + + pip install git+https://github.com/LaboratoryOpticsBiosciences/napari-swc-reader.git - pip install napari-svg ## Contributing @@ -35057,14 +36488,14 @@ the coverage at least stays the same before you submit a pull request. ## License Distributed under the terms of the [BSD-3] license, -""napari-svg"" is free and open source software +""napari-swc-reader"" is free and open source software ## Issues If you encounter any problems, please [file an issue] along with a detailed description. [napari]: https://github.com/napari/napari -[Cookiecutter]: https://github.com/audreyr/cookiecutter +[copier]: https://copier.readthedocs.io/en/stable/ [@napari]: https://github.com/napari [MIT]: http://opensource.org/licenses/MIT [BSD-3]: http://opensource.org/licenses/BSD-3-Clause @@ -35072,14 +36503,16 @@ If you encounter any problems, please [file an issue] along with a detailed desc [GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt [Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0 [Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt -[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin -[file an issue]: https://github.com/napari/napari-svg/issues +[napari-plugin-template]: https://github.com/napari/napari-plugin-template + +[file an issue]: https://github.com/LaboratoryOpticsBiosciences/napari-swc-reader/issues + [napari]: https://github.com/napari/napari [tox]: https://tox.readthedocs.io/en/latest/ [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ -","['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Source, https://github.com/napari/napari-svg', 'Bug Tracker, https://github.com/napari/napari-svg/issues']",,napari-svg.svg_writer,,,,['.svg'],,https://pypi.org/project/napari-svg,https://github.com/napari/napari-svg, -351,napari-tabu,0.1.5,2022-02-02,2023-06-18,napari-tabu,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,https://github.com/haesleinhuepf/napari-tabu,A plugin for handling multiple napari windows,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari', 'napari-tools-menu']","# napari-tabu +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/LaboratoryOpticsBiosciences/napari-swc-reader/issues', 'Documentation, https://github.com/LaboratoryOpticsBiosciences/napari-swc-reader#README.md', 'Source Code, https://github.com/LaboratoryOpticsBiosciences/napari-swc-reader', 'User Support, https://github.com/LaboratoryOpticsBiosciences/napari-swc-reader/issues']",napari-swc-reader.get_reader,,,napari-swc-reader.make_sample_data,['*.swc'],,,https://pypi.org/project/napari-swc-reader,, +369,napari-tabu,0.1.5,2022-02-02,2023-06-18,napari-tabu,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,https://github.com/haesleinhuepf/napari-tabu,A plugin for handling multiple napari windows,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari', 'napari-tools-menu']","# napari-tabu [![License](https://img.shields.io/pypi/l/napari-tabu.svg?color=green)](https://github.com/haesleinhuepf/napari-tabu/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-tabu.svg?color=green)](https://pypi.org/project/napari-tabu) @@ -35145,9 +36578,16 @@ If you encounter any problems, please open a thread on [image.sc](https://image. ","['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/haesleinhuepf/napari-tabu/issues', 'Documentation, https://github.com/haesleinhuepf/napari-tabu#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-tabu', 'User Support, https://github.com/haesleinhuepf/napari-tabu/issues']",,,napari-tabu.napari_experimental_provide_function,,,,,https://pypi.org/project/napari-tabu,https://github.com/haesleinhuepf/napari-tabu, -352,Tapenade Processing,0.0.2,,,napari-tapenade-processing,Jules Vanaret,jules.vanaret@univ-amu.fr,MIT,,A visual pipeline to process images with Tapenade in Napari,>=3.8,"['numpy', 'magicgui', 'qtpy', 'tifffile', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# :herb: napari-tapenade-processing +370,Tapenade Processing,0.0.6,,,napari-tapenade-processing,Jules Vanaret,jules.vanaret@univ-amu.fr,MIT,,A visual pipeline to process images with Tapenade in Napari,>=3.8,"['numpy', 'magicgui', 'qtpy', 'tifffile', 'natsort', 'tapenade>=0.0.13', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# :herb: napari-tapenade-processing - +[![License MIT](https://img.shields.io/pypi/l/napari-tapenade-processing.svg?color=green)](https://github.com/jules-vanaret/napari-tapenade-processing/raw/main/LICENSE) +[![PyPI](https://img.shields.io/pypi/v/napari-tapenade-processing.svg?color=green)](https://pypi.org/project/napari-tapenade-processing) +[![Python Version](https://img.shields.io/pypi/pyversions/napari-tapenade-processing.svg?color=green)](https://python.org) +[![tests](https://github.com/jules-vanaret/napari-tapenade-processing/workflows/tests/badge.svg)](https://github.com/jules-vanaret/napari-tapenade-processing/actions) +[![codecov](https://codecov.io/gh/jules-vanaret/napari-tapenade-processing/branch/main/graph/badge.svg)](https://codecov.io/gh/jules-vanaret/napari-tapenade-processing) +[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-tapenade-processing)](https://napari-hub.org/plugins/napari-tapenade-processing) + + A collection of methods to process images of deep 3D/3D+time tissues in Napari. @@ -35157,6 +36597,8 @@ If you use this plugin for your research, please [cite us](https://github.com/Gu ## Overview + + While working with large and dense 3D and 3D+time gastruloid datasets, we found that being able to visualise and interact with the data dynamically greatly helped processing it. During the pre-processing stage, dynamical exploration and interaction led to faster tuning of the parameters by allowing direct visual feedback, and gave key biophysical insight during the analysis stage. @@ -35258,11 +36700,11 @@ This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookie [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/jules-vanaret/napari-tapenade-processing/issues', 'Documentation, https://github.com/jules-vanaret/napari-tapenade-processing#README.md', 'Source Code, https://github.com/jules-vanaret/napari-tapenade-processing', 'User Support, https://github.com/jules-vanaret/napari-tapenade-processing/issues']",,,napari-tapenade-processing.tapenade_processing,,,,,https://pypi.org/project/napari-tapenade-processing,, -353,TARDIS-em napari plugin,0.3.1,,,napari-tardis-em,Robert Kiewisz,rkiewisz@nysbc.org,MIT,,Tomogram and micrograph segmentation with TARDIS-em,>=3.10,"['setuptools>=70.3.0', 'napari>=0.5.0', 'torch>=2.2.2', 'tardis-em[nd2]==0.3.0', 'numpy>=2.0.0', 'matplotlib>=3.9.1', 'qtpy>=2.4.1', 'pyqt5>=5.15.10', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# Napari plugin for TARDIS-em +371,TARDIS-em napari plugin,0.3.9,,,napari-tardis-em,Robert Kiewisz,rkiewisz@nysbc.org,MIT,,Tomogram and micrograph segmentation with TARDIS-em,>=3.10,"['setuptools>=70.3.0', 'napari>=0.5.0', 'torch>=2.2.2', 'tardis-em[nd2]>=0.3.9', 'numpy>=2.0.0', 'matplotlib>=3.9.1', 'qtpy>=2.4.1', 'pyqt5>=5.15.10', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# Napari plugin for TARDIS-em Napari [gen2] plugin for Cry-EM and Cryo-ET micrograph segmentation with TARDIS-em. ","['Development Status :: 5 - Production/Stable', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']",,napari-tardis-em.import_data,,napari-tardis-em.viewer_train,,"['*.mrc', '*.rec', '*.tif', '*.tiff', '*.nd2', '*.csv']",,,https://pypi.org/project/napari-tardis-em,, -354,napari-text-layer,0.1.2,2022-01-29,2023-06-18,napari-text-layer,Hanjin Liu,liuhanjin-sc@g.ecc.u-tokyo.ac.jp,BSD 3-Clause,https://pypi.org/project/napari-text-layer/,Text layer for bio-image annotation.,>=3.7,,"# napari-text-layer +372,napari-text-layer,0.1.2,2022-01-29,2023-06-18,napari-text-layer,Hanjin Liu,liuhanjin-sc@g.ecc.u-tokyo.ac.jp,BSD 3-Clause,https://pypi.org/project/napari-text-layer/,Text layer for bio-image annotation.,>=3.7,,"# napari-text-layer Napari text layer for bio-image annotation. @@ -35288,7 +36730,7 @@ pip install napari-text-layer ","['Framework :: napari', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9']",,,,napari-text-layer.TextLayerOverview,,,,,https://pypi.org/project/napari-text-layer/,, -355,napari-threedee,0.0.27,2022-10-24,2024-09-19,napari-threedee,napari team,napari-steering-council@googlegroups.com,BSD-3-Clause,https://github.com/alisterburt/napari-threedee,A suite of useful tools based on 3D interactivity in napari,>=3.8,"['einops', 'imageio!=2.11.0,!=2.22.1,>=2.5.0', 'libigl', 'magicgui', 'morphosamplers', 'mrcfile', 'napari', 'numpy', 'pandas', 'pooch', 'psygnal', 'pydantic', 'qtpy', 'scipy', 'superqt', 'vispy', 'zarr', 'lxml[html_clean]>5; extra == ""dev""', 'mkdocs; extra == ""dev""', 'mkdocs-gallery>0.7.6; extra == ""dev""', 'mkdocs-material; extra == ""dev""', 'mkdocstrings[python]; extra == ""dev""', 'mkdocs-video; extra == ""dev""', 'pytest; extra == ""dev""', 'pytest-qt; extra == ""dev""', 'qtgallery; extra == ""dev""', 'scikit-image[data]; extra == ""dev""']","# napari-threedee +373,napari-threedee,0.0.28,2022-10-24,2024-10-09,napari-threedee,napari team,napari-steering-council@googlegroups.com,BSD-3-Clause,https://github.com/alisterburt/napari-threedee,A suite of useful tools based on 3D interactivity in napari,>=3.8,"['einops', 'imageio!=2.11.0,!=2.22.1,>=2.5.0', 'libigl', 'magicgui', 'morphosamplers', 'mrcfile', 'napari', 'numpy', 'pandas', 'pooch', 'psygnal', 'pydantic', 'qtpy', 'scipy', 'superqt', 'vispy', 'zarr', 'lxml[html_clean]>5; extra == ""dev""', 'mkdocs; extra == ""dev""', 'mkdocs-gallery>0.7.6; extra == ""dev""', 'mkdocs-material; extra == ""dev""', 'mkdocstrings[python]; extra == ""dev""', 'mkdocs-video; extra == ""dev""', 'pytest; extra == ""dev""', 'pytest-qt; extra == ""dev""', 'qtgallery; extra == ""dev""', 'scikit-image[data]; extra == ""dev""']","# napari-threedee [![License](https://img.shields.io/pypi/l/napari-threedee.svg?color=green)](https://github.com/alisterburt/napari-threedee/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-threedee.svg?color=green)](https://pypi.org/project/napari-threedee) @@ -35410,7 +36852,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/napari-threedee/napari-threedee/issues', 'Documentation, https://github.com/napari-threedee/napari-threedee#README.md', 'Source Code, https://github.com/napari-threedee/napari-threedee', 'User Support, https://github.com/napari-threedee/napari-threedee/issues']",,,napari-threedee.QtPointAnnotatorWidget,napari-threedee.hiv_particles,,,,https://pypi.org/project/napari-threedee,https://github.com/alisterburt/napari-threedee, -356,napari-tiff,0.1.3,,,napari-tiff,"Genevieve Buckley, napari-tiff contributors",napari core developers ," +374,napari-tiff,0.1.3,,,napari-tiff,"Genevieve Buckley, napari-tiff contributors",napari core developers ," Copyright (c) 2020, Genevieve Buckley All rights reserved. @@ -35496,7 +36938,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Intended Audience :: Education', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Software Development :: Libraries', 'Topic :: Scientific/Engineering', 'Programming Language :: Python :: Implementation :: CPython', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['source, https://github.com/napari/napari-tiff', 'tracker, https://github.com/napari/napari-tiff/issues']",napari-tiff.get_reader,,,,"['*.zip', '*.tiff', '*.tif', '*.ome.tif', '*.lsm', '*.stk', '*.qpi', '*.pcoraw', '*.qptiff', '*.ptiff', '*.ptif', '*.gel', '*.seq', '*.svs', '*.scn', '*.zif', '*.ndpi', '*.bif', '*.tf8', '*.tf2', '*.btf', '*.eer']",,,https://pypi.org/project/napari-tiff,, -357,napari TileDB bioimaging,0.0.1,2023-12-08,2023-12-08,napari-tiledb-bioimg,"TileDB, Inc.",help@tiledb.io,MIT,https://pypi.org/project/napari-tiledb-bioimg,Support reading and writing TileDB-Bioimaging image arrays within Napari,>=3.8,"['dask', 'tiledb-bioimg (>=0.2.1)', ""tiledb-cloud ; extra == 'cloud'"", ""napari ; extra == 'testing'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-tiledb-bioimg +375,napari TileDB bioimaging,0.0.1,2023-12-08,2023-12-08,napari-tiledb-bioimg,"TileDB, Inc.",help@tiledb.io,MIT,https://pypi.org/project/napari-tiledb-bioimg,Support reading and writing TileDB-Bioimaging image arrays within Napari,>=3.8,"['dask', 'tiledb-bioimg (>=0.2.1)', ""tiledb-cloud ; extra == 'cloud'"", ""napari ; extra == 'testing'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-tiledb-bioimg [![License MIT](https://img.shields.io/pypi/l/napari-tiledb-bioimg.svg?color=green)](https://github.com/TileDB-Inc/napari-tiledb-bioimg/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-tiledb-bioimg.svg?color=green)](https://pypi.org/project/napari-tiledb-bioimg) @@ -35560,7 +37002,7 @@ Distributed under the terms of the [MIT] license, If you encounter any problems, please [file an issue](https://github.com/TileDB-Inc/napari-tiledb-bioimg/issues/new) along with a detailed description. ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']",,napari-tiledb-bioimg.get_reader,napari-tiledb-bioimg.write_image_lossless,napari-tiledb-bioimg.make_qwidget,,"['tiledb://*', 's3://*', '*.tdb', '*.tiledb']",,,https://pypi.org/project/napari-tiledb-bioimg,, -358,napari-tiler,0.0.9,2022-02-17,2023-06-18,napari-tiler,Tim Morello,tdmorello@gmail.com,LICENCE,https://pypi.org/project/napari-tiler/,N-dimensional tiling and merging support for napari,">=3.7,<3.11","['importlib-metadata (<4.3); python_version < ""3.8""', 'napari-plugin-engine (>=0.2.0,<0.3.0)', 'napari-tools-menu (>=0.1.7,<0.2.0)', 'numpy (>=1.21.4,<2.0.0)', 'tiler (>=0.4.1,<0.5.0)']","# napari-tiler +376,napari-tiler,0.0.9,2022-02-17,2023-06-18,napari-tiler,Tim Morello,tdmorello@gmail.com,LICENCE,https://pypi.org/project/napari-tiler/,N-dimensional tiling and merging support for napari,">=3.7,<3.11","['importlib-metadata (<4.3); python_version < ""3.8""', 'napari-plugin-engine (>=0.2.0,<0.3.0)', 'napari-tools-menu (>=0.1.7,<0.2.0)', 'numpy (>=1.21.4,<2.0.0)', 'tiler (>=0.4.1,<0.5.0)']","# napari-tiler [![License](https://img.shields.io/pypi/l/napari-tiler.svg?color=green)](https://github.com/tdmorello/napari-tiler/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-tiler.svg?color=green)](https://pypi.org/project/napari-tiler) @@ -35650,7 +37092,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'License :: Other/Proprietary License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Topic :: Software Development :: Testing']","['Bug Tracker, https://github.com/tdmorello/napari-tiler/issues', 'Documentation, https://github.com/tdmorello/napari-tiler#README.md', 'Source Code, https://github.com/tdmorello/napari-tiler', 'User Support, https://github.com/tdmorello/napari-tiler/issues']",,,napari-tiler.TilerWidget,,,,,https://pypi.org/project/napari-tiler/,, -359,TSP,0.0.6,2022-02-01,2023-07-25,napari-time-series-plotter,Christopher Nauroth-Kress,nauroth_C@ukw.de,BSD-3-Clause,https://github.com/ch-n/napari-time_series_plotter,"A Plugin for napari to visualize pixel values over the first dimension (time -> t+3D, t+2D) as graphs.",>=3.8,"['napari-matplotlib (<1.0)', 'numpy', 'pandas', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-time_series_plotter +377,TSP,0.0.6,2022-02-01,2023-07-25,napari-time-series-plotter,Christopher Nauroth-Kress,nauroth_C@ukw.de,BSD-3-Clause,https://github.com/ch-n/napari-time_series_plotter,"A Plugin for napari to visualize pixel values over the first dimension (time -> t+3D, t+2D) as graphs.",>=3.8,"['napari-matplotlib (<1.0)', 'numpy', 'pandas', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-time_series_plotter [![License](https://img.shields.io/pypi/l/napari-time_series_plotter.svg?color=green)](https://github.com/ch-n/napari-time_series_plotter/raw/main/LICENSE) [![Python Version](https://img.shields.io/pypi/pyversions/napari-time_series_plotter.svg?color=green)](https://python.org) @@ -35801,7 +37243,7 @@ Images used in the demo gif were taken from [The Cancer Imaging Archive]
[pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/ch-n/napari-time_series_plotter/issues', 'Documentation, https://github.com/ch-n/napari-time_series_plotter#README.md', 'Source Code, https://github.com/ch-n/napari-time_series_plotter', 'User Support, https://github.com/ch-n/napari-time_series_plotter/issues']",,,napari-time-series-plotter.Explorer,,,,,https://pypi.org/project/napari-time-series-plotter,https://github.com/ch-n/napari-time_series_plotter, -360,napari-time-slicer,0.5.0,2022-02-02,2023-11-12,napari-time-slicer,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,https://github.com/haesleinhuepf/napari-time-slicer,A meta plugin for processing timelapse data in napari timepoint by timepoint,>=3.8,"['napari-plugin-engine >=0.1.4', 'numpy', 'toolz', 'napari-tools-menu', 'napari-workflows']","# napari-time-slicer +378,napari-time-slicer,0.5.0,2022-02-02,2024-12-19,napari-time-slicer,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,https://github.com/haesleinhuepf/napari-time-slicer,A meta plugin for processing timelapse data in napari timepoint by timepoint,>=3.8,"['napari-plugin-engine >=0.1.4', 'numpy', 'toolz', 'napari-tools-menu', 'napari-workflows']","# napari-time-slicer [![License](https://img.shields.io/pypi/l/napari-time-slicer.svg?color=green)](https://github.com/haesleinhuepf/napari-time-slicer/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-time-slicer.svg?color=green)](https://pypi.org/project/napari-time-slicer) @@ -35939,7 +37381,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/haesleinhuepf/napari-time-slicer/issues', 'Documentation, https://github.com/haesleinhuepf/napari-time-slicer#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-time-slicer', 'User Support, https://github.com/haesleinhuepf/napari-time-slicer/issues']",,,napari-time-slicer.napari_experimental_provide_function,,,,,https://pypi.org/project/napari-time-slicer,https://github.com/haesleinhuepf/napari-time-slicer, -361,Timelapse Processor,0.0.2,,,napari-timelapse-processor,Johannes Soltwedel,johannes_richard.soltwedel@tu-dresden.de," +379,Timelapse Processor,0.0.2,,,napari-timelapse-processor,Johannes Soltwedel,johannes_richard.soltwedel@tu-dresden.de," Copyright (c) 2024, Johannes Soltwedel All rights reserved. @@ -36144,7 +37586,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['Repository, https://github.com/jo-mueller/napari-timelapse-processor.git']",,,,,,,,https://pypi.org/project/napari-timelapse-processor,, -362,napari-timeseries-opener-plugin,0.1.8,2022-07-05,2023-06-18,napari-timeseries-opener-plugin,Niklas Netter,niknett@gmail.com,BSD-3-Clause,https://github.com/gatoniel/napari-timeseries-opener-plugin,Simple plugin that opens separate .tif files as a 3-dimensional layer.,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'qtpy', 'magicgui', 'tifffile', 'stardist', 'tensorflow']","# napari-timeseries-opener-plugin +380,napari-timeseries-opener-plugin,0.1.8,2022-07-05,2023-06-18,napari-timeseries-opener-plugin,Niklas Netter,niknett@gmail.com,BSD-3-Clause,https://github.com/gatoniel/napari-timeseries-opener-plugin,Simple plugin that opens separate .tif files as a 3-dimensional layer.,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'qtpy', 'magicgui', 'tifffile', 'stardist', 'tensorflow']","# napari-timeseries-opener-plugin [![License](https://img.shields.io/pypi/l/napari-timeseries-opener-plugin.svg?color=green)](https://github.com/gatoniel/napari-timeseries-opener-plugin/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-timeseries-opener-plugin.svg?color=green)](https://pypi.org/project/napari-timeseries-opener-plugin) @@ -36219,7 +37661,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/gatoniel/napari-timeseries-opener-plugin/issues', 'Documentation, https://github.com/gatoniel/napari-timeseries-opener-plugin#README.md', 'Source Code, https://github.com/gatoniel/napari-timeseries-opener-plugin', 'User Support, https://github.com/gatoniel/napari-timeseries-opener-plugin/issues']",,,napari-timeseries-opener-plugin.LoadWidget,,,,,https://pypi.org/project/napari-timeseries-opener-plugin,https://github.com/gatoniel/napari-timeseries-opener-plugin, -363,Napari TissUUmaps,1.1.2,2022-02-10,2023-06-18,napari-tissuumaps,Nicolas Pielawski,nicolas@pielawski.fr,MIT,https://github.com/TissUUmaps/napari-tissuumaps,A plugin to export Napari projects to TissUUmaps.,>=3.8,"['numpy', ""napari ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""tox ; extra == 'testing'""]","# 🏝 napari-tissuumaps 🧫 +381,Napari TissUUmaps,1.1.2,2022-02-10,2023-06-18,napari-tissuumaps,Nicolas Pielawski,nicolas@pielawski.fr,MIT,https://github.com/TissUUmaps/napari-tissuumaps,A plugin to export Napari projects to TissUUmaps.,>=3.8,"['numpy', ""napari ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""tox ; extra == 'testing'""]","# 🏝 napari-tissuumaps 🧫 [![License MIT](https://img.shields.io/pypi/l/napari-tissuumaps.svg?color=green)](https://github.com/npielawski/napari-tissuumaps/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-tissuumaps.svg?color=green)](https://pypi.org/project/napari-tissuumaps) @@ -36311,10 +37753,11 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Topic :: Scientific/Engineering :: Image Processing']",,,napari-tissuumaps.write_layers,,,,['.tmap'],,https://pypi.org/project/napari-tissuumaps,https://github.com/TissUUmaps/napari-tissuumaps, -364,Tomocube data viewer,2024.4,2023-04-19,2024-04-01,napari-tomocube-data-viewer,Dohyeon Lee,dleh428@kaist.ac.kr,MIT,https://github.com/ehgus/napari-tomocube-data-viewer,"""A plugin to visualize three-dimensional data from Tomocube's microscopy""",>=3.8,"['numpy', 'TCFile', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-tomocube-data-viewer +382,Tomocube data viewer,2024.10.0,2023-04-19,2024-10-16,napari-tomocube-data-viewer,Dohyeon Lee,Dohyeon Lee ,MIT,https://github.com/ehgus/napari-tomocube-data-viewer,A plugin to visualize three-dimensional data from Tomocube's microscopy,>=3.8,"['numpy', 'TCFile>=2024.10.1', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""']","# napari-tomocube-data-viewer [![License MIT](https://img.shields.io/badge/License-MIT-yellow.svg)](https://github.com/ehgus/napari-tomocube-data-viewer/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-tomocube-data-viewer.svg?color=green)](https://pypi.org/project/napari-tomocube-data-viewer) +[![Python Version](https://img.shields.io/pypi/pyversions/napari-tomocube-data-viewer.svg?color=green)](https://python.org) [![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-tomocube-data-viewer)](https://napari-hub.org/plugins/napari-tomocube-data-viewer) A plugin to visualize three-dimensional data from [Tomocube](https://www.tomocube.com/)'s holotomography @@ -36338,6 +37781,10 @@ You can install `napari-tomocube-data-viewer` via [pip] or [conda]: pip install napari-tomocube-data-viewer conda install napari-tomocube-data-viewer +To install latest development version : + + pip install git+https://github.com/ehgus/napari-tomocube-data-viewer.git + ## Contributing Contributions are very welcome. Tests can be run with [tox], please ensure @@ -36361,8 +37808,9 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [conda]: https://docs.anaconda.com/free/miniconda/index.html [file an issue]: https://github.com/ehgus/napari-tomocube-data-viewer/issues -","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/ehgus/napari-tomocube-data-viewer/issues', 'Documentation, https://github.com/ehgus/napari-tomocube-data-viewer #README.md', 'Source Code, https://github.com/ehgus/napari-tomocube-data-viewer', 'User Support, https://github.com/ehgus/napari-tomocube-data-viewer/issues']",napari-tomocube-data-viewer.get_reader,,,,['*.TCF'],,,https://pypi.org/project/napari-tomocube-data-viewer,https://github.com/ehgus/napari-tomocube-data-viewer, -365,ToMoDL Reconstruction,0.1.17,,,napari-tomodl,"Marcos Antonio Obando, Germán Mato, Teresa Correia",marcos.obando@ib.edu.ar,MIT,,A plugin for optical projection tomography reconstruction with model-based neural networks.,<=3.9,"['magicgui', 'qtpy', 'napari[all]', 'pyqt5', 'phantominator', 'opencv-python', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-tomodl +[PyPI]: https://pypi.org/ +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/ehgus/napari-tomocube-data-viewer/issues', 'Documentation, https://github.com/ehgus/napari-tomocube-data-viewer', 'Source Code, https://github.com/ehgus/napari-tomocube-data-viewer', 'User Support, https://github.com/ehgus/napari-tomocube-data-viewer/issues']",napari-tomocube-data-viewer.get_reader,,,,['*.TCF'],,,https://pypi.org/project/napari-tomocube-data-viewer,https://github.com/ehgus/napari-tomocube-data-viewer, +383,ToMoDL Reconstruction,0.1.17,,,napari-tomodl,"Marcos Antonio Obando, Germán Mato, Teresa Correia",marcos.obando@ib.edu.ar,MIT,,A plugin for optical projection tomography reconstruction with model-based neural networks.,<=3.9,"['magicgui', 'qtpy', 'napari[all]', 'pyqt5', 'phantominator', 'opencv-python', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-tomodl [![License MIT](https://img.shields.io/pypi/l/napari-tomodl.svg?color=green)](https://github.com/marcoso96/napari-tomodl/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-tomodl.svg?color=green)](https://pypi.org/project/napari-tomodl) @@ -36458,7 +37906,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']",,,,napari-tomodl.make_reconstruct_widget,,,,,https://pypi.org/project/napari-tomodl,, -366,napari-tomoslice,0.0.7,2022-02-02,2023-06-18,napari-tomoslice,Alister Burt,alisterburt@gmail.com,BSD-3-Clause,https://github.com/alisterburt/napari-tomoslice,A napari plugin for interacting with electron cryotomograms,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari (==0.4.12)', 'mrcfile', 'typer']","# napari-tomoslice +384,napari-tomoslice,0.0.7,2022-02-02,2023-06-18,napari-tomoslice,Alister Burt,alisterburt@gmail.com,BSD-3-Clause,https://github.com/alisterburt/napari-tomoslice,A napari plugin for interacting with electron cryotomograms,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari (==0.4.12)', 'mrcfile', 'typer']","# napari-tomoslice [![License](https://img.shields.io/pypi/l/napari-tomoslice.svg?color=green)](https://github.com/alisterburt/napari-tomoslice/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-tomoslice.svg?color=green)](https://pypi.org/project/napari-tomoslice) @@ -36540,7 +37988,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/alisterburt/napari-tomoslice/issues', 'Documentation, https://github.com/alisterburt/napari-tomoslice#README.md', 'Source Code, https://github.com/alisterburt/napari-tomoslice', 'User Support, https://github.com/alisterburt/napari-tomoslice/issues']",,,napari-tomoslice.TomoSliceWidget,,,,,https://pypi.org/project/napari-tomoslice,https://github.com/alisterburt/napari-tomoslice, -367,TomoTwin,0.4.0,2023-04-05,2023-12-08,napari-tomotwin,Thorsten Wagner,twa1@posteo.de,MPL-2.0,https://github.com/MPI-Dortmund/napari-tomotwin,Several tools for the work with TomoTwin,>=3.10,"['numpy', 'pandas', 'matplotlib', 'scipy', 'napari-clusters-plotter >=0.7.2', 'magicgui', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# napari-tomotwin +385,TomoTwin,0.4.1,2023-04-05,2023-12-08,napari-tomotwin,Thorsten Wagner,twa1@posteo.de,MPL-2.0,https://github.com/MPI-Dortmund/napari-tomotwin,Several tools for the work with TomoTwin,>=3.10,"['numpy', 'pandas', 'matplotlib', 'scipy', 'napari-clusters-plotter>=0.7.2', 'magicgui', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""']","# napari-tomotwin [![License Mozilla Public License 2.0](https://img.shields.io/pypi/l/napari-tomotwin.svg?color=green)](https://github.com/MPI-Dortmund/napari-tomotwin/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-tomotwin.svg?color=green)](https://pypi.org/project/napari-tomotwin) @@ -36581,7 +38029,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Mozilla Public License 2.0 (MPL 2.0)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']",,,,napari-tomotwin.UmapTool,,,,,https://pypi.org/project/napari-tomotwin,https://github.com/MPI-Dortmund/napari-tomotwin, -368,ToothFairy Annotator,0.0.16,2024-04-10,2024-04-24,napari-toothfairy-annotator,Luca Lumetti,lumetti.luca@gmail.com,MIT,https://github.com/LucaLumetti/napari-toothfairy-annotator,The plugin employed to annotate volumes employed in the ToothFairy 2 Challenge,>=3.8,"['numpy', 'magicgui', 'qtpy', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-toothfairy-annotator +386,ToothFairy Annotator,0.0.16,2024-04-10,2024-04-24,napari-toothfairy-annotator,Luca Lumetti,lumetti.luca@gmail.com,MIT,https://github.com/LucaLumetti/napari-toothfairy-annotator,The plugin employed to annotate volumes employed in the ToothFairy 2 Challenge,>=3.8,"['numpy', 'magicgui', 'qtpy', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-toothfairy-annotator [![License MIT](https://img.shields.io/pypi/l/napari-toothfairy-annotator.svg?color=green)](https://github.com/LucaLumetti/napari-toothfairy-annotator/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-toothfairy-annotator.svg?color=green)](https://pypi.org/project/napari-toothfairy-annotator) @@ -36649,7 +38097,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/LucaLumetti/napari-toothfairy-annotator/issues', 'Documentation, https://github.com/LucaLumetti/napari-toothfairy-annotator#README.md', 'Source Code, https://github.com/LucaLumetti/napari-toothfairy-annotator', 'User Support, https://github.com/LucaLumetti/napari-toothfairy-annotator/issues']",napari-toothfairy-annotator.get_reader,napari-toothfairy-annotator.write_multiple,napari-toothfairy-annotator.annotator,,['*'],,['.npy'],https://pypi.org/project/napari-toothfairy-annotator,https://github.com/LucaLumetti/napari-toothfairy-annotator, -369,Napari Topological Skeleton Analysis,0.0.1,,,napari-toska,"Allyson Quinn Ryan, Johannes Soltwedel",allyson_quinn.ryan@tu-dresden.de,BSD-3-Clause,,Extraacts and analyses topological skeletons as undirected graphs,>=3.8,"['numpy', 'magicgui', 'qtpy', 'scikit-image >=0.21.0', 'networkx', 'scipy', 'napari-workflows', 'napari-skimage-regionprops', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-toska +387,Napari Topological Skeleton Analysis,0.0.1,,,napari-toska,"Allyson Quinn Ryan, Johannes Soltwedel",allyson_quinn.ryan@tu-dresden.de,BSD-3-Clause,,Extraacts and analyses topological skeletons as undirected graphs,>=3.8,"['numpy', 'magicgui', 'qtpy', 'scikit-image >=0.21.0', 'networkx', 'scipy', 'napari-workflows', 'napari-skimage-regionprops', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-toska [![License BSD-3](https://img.shields.io/pypi/l/napari-toska.svg?color=green)](https://github.com/allysonryan/napari-toska/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-toska.svg?color=green)](https://pypi.org/project/napari-toska) @@ -36711,7 +38159,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/allysonryan/napari-toska/issues', 'Source Code, https://github.com/allysonryan/napari-toska', 'User Support, https://github.com/allysonryan/napari-toska/issues']",,,napari-toska.labeled_skeleton,,,,,https://pypi.org/project/napari-toska,, -370,Napari Tracer Plugin,1.0.2,,,napari-tracing,Vasudha Jha,reachvasudha27@gmail.com,GPL-3.0-only,,A plugin to trace the brightest path between two points in an image,>=3.8,"['numpy', 'qtpy', 'brightest-path-lib', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-tracing +388,Napari Tracer Plugin,1.0.2,,,napari-tracing,Vasudha Jha,reachvasudha27@gmail.com,GPL-3.0-only,,A plugin to trace the brightest path between two points in an image,>=3.8,"['numpy', 'qtpy', 'brightest-path-lib', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-tracing [![License GNU GPL v3.0](https://img.shields.io/pypi/l/napari-tracing.svg?color=green)](https://github.com/mapmanager/napari-tracing/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-tracing.svg?color=green)](https://pypi.org/project/napari-tracing) @@ -36786,7 +38234,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt [file an issue]: https://github.com/mapmanager/napari-tracing/issues ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/mapmanager/napari-tracing/issues', 'Documentation, https://github.com/mapmanager/napari-tracing#README.md', 'Source Code, https://github.com/mapmanager/napari-tracing', 'User Support, https://github.com/mapmanager/napari-tracing/issues']",,,napari-tracing.make_qwidget,,,,,https://pypi.org/project/napari-tracing,, -371,trackastra,0.1.4,,,napari-trackastra,"Benjamin Gallusser, Martin Weigert","benjamin.gallusser@epfl.ch, martin.weigert@epfl.ch"," +389,trackastra,0.1.6,,,napari-trackastra,"Benjamin Gallusser, Martin Weigert","benjamin.gallusser@epfl.ch, martin.weigert@epfl.ch"," Copyright (c) 2024, Martin Weigert All rights reserved. @@ -36814,7 +38262,7 @@ SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. -",,Napari plugin for cell tracking with trackastra.,>=3.10,"['napari[all] <0.5', 'numpy', 'magicgui', 'qtpy', 'scikit-image', 'trackastra', 'napari-ctc-io', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-trackastra +",,Napari plugin for cell tracking with trackastra.,>=3.10,"['numpy', 'scikit-image', 'trackastra', 'napari-ctc-io', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# napari-trackastra [![PyPI](https://img.shields.io/pypi/v/napari-trackastra.svg?color=green)](https://pypi.org/project/napari-trackastra) [![tests](https://github.com/weigertlab/napari-trackastra/workflows/tests/badge.svg)](https://github.com/weigertlab/napari-trackastra/actions) @@ -36827,14 +38275,15 @@ A napari plugin for cell tracking with [`trackastra`](https://github.com/weigert ## Installation -Install the latest version from PyPI with: -``` -pip install napari-trackastra -``` +1. Please install napari as outlined [here](https://napari.org/stable/tutorials/fundamentals/installation.html). -For tracking with an integer linear program (ILP, which is optional), follow the [installation instructions of the main `trackastra` package](https://github.com/weigertlab/trackastra/blob/main/README.md#installation). +2. After that, install the latest version of this plugin from PyPI with: + ``` + pip install napari-trackastra + ``` Notes: +- For tracking with an integer linear program (ILP, which is optional), follow the [installation instructions of the main `trackastra` package](https://github.com/weigertlab/trackastra/blob/main/README.md#installation). - On Windows currently only supported for Python 3.10. ## Usage @@ -36849,7 +38298,7 @@ Notes: [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 3 - Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/weigertlab/napari-trackastra/issues', 'Documentation, https://github.com/weigertlab/napari-trackastra#README.md', 'Source Code, https://github.com/weigertlab/napari-trackastra', 'User Support, https://github.com/weigertlab/napari-trackastra/issues']",,,napari-trackastra.track,napari-trackastra.example_data_bacteria,,,,https://pypi.org/project/napari-trackastra,, -372,Particle tracking,0.3.0,2023-11-08,2023-11-09,napari-trackpy,Roy Hoitink,L.D.Hoitink@uu.nl,MIT,https://pypi.org/project/napari-trackpy,Plugin to do trackpy particle tracking on microscopy data within napari,>=3.8,"['numpy', 'magicgui', 'qtpy', 'napari', 'napari-aicsimageio', 'readlif', 'trackpy', 'matplotlib', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-trackpy +390,Particle tracking,0.3.0,2023-11-08,2023-11-09,napari-trackpy,Roy Hoitink,L.D.Hoitink@uu.nl,MIT,https://pypi.org/project/napari-trackpy,Plugin to do trackpy particle tracking on microscopy data within napari,>=3.8,"['numpy', 'magicgui', 'qtpy', 'napari', 'napari-aicsimageio', 'readlif', 'trackpy', 'matplotlib', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-trackpy [![License MIT](https://img.shields.io/pypi/l/napari-trackpy.svg?color=green)](https://github.com/rhoitink/napari-trackpy/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-trackpy.svg?color=green)](https://pypi.org/project/napari-trackpy) @@ -36900,7 +38349,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/rhoitink/napari-trackpy/issues', 'Documentation, https://github.com/rhoitink/napari-trackpy#README.md', 'Source Code, https://github.com/rhoitink/napari-trackpy', 'User Support, https://github.com/rhoitink/napari-trackpy/issues']",,napari-trackpy.write_points_xyzfile,napari-trackpy.xyz_tracking,,,['.xyz'],,https://pypi.org/project/napari-trackpy,, -373,napari-tracks-reader,0.1.3,2022-02-11,2023-06-18,napari-tracks-reader,Sylvain Prigent,sylvain.prigent@inria.fr,GNU GPL v3.0,https://github.com/sylvainprigent/napari-tracks-reader,"Read tracks from txt (xml, csv) files to napari",>=3.6,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'pandas (>=1.2.4)']","# napari-tracks-reader +391,napari-tracks-reader,0.1.3,2022-02-11,2023-06-18,napari-tracks-reader,Sylvain Prigent,sylvain.prigent@inria.fr,GNU GPL v3.0,https://github.com/sylvainprigent/napari-tracks-reader,"Read tracks from txt (xml, csv) files to napari",>=3.6,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'pandas (>=1.2.4)']","# napari-tracks-reader [![License](https://img.shields.io/pypi/l/napari-tracks-reader.svg?color=green)](https://github.com/sylvainprigent/napari-tracks-reader/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-tracks-reader.svg?color=green)](https://pypi.org/project/napari-tracks-reader) @@ -36964,7 +38413,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']",,napari-tracks-reader.napari_get_reader,,,,['*'],,,https://pypi.org/project/napari-tracks-reader,https://github.com/sylvainprigent/napari-tracks-reader, -374,napari TRAIT2D,0.1.4,2022-08-18,2023-06-18,napari-trait2d,Jacopo Abramo,jacopo.abramo@gmail.com,BSD-3-Clause,https://github.com/jacopoabramo/napari-trait2d,"A napari plugin for TRAIT2D, a software for quantitative analysis of single particle diffusion data",>=3.8,"['numpy', 'qtpy', 'napari[pyqt5]', 'dacite', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'""]","# napari-trait2d +392,napari TRAIT2D,0.1.4,2022-08-18,2023-06-18,napari-trait2d,Jacopo Abramo,jacopo.abramo@gmail.com,BSD-3-Clause,https://github.com/jacopoabramo/napari-trait2d,"A napari plugin for TRAIT2D, a software for quantitative analysis of single particle diffusion data",>=3.8,"['numpy', 'qtpy', 'napari[pyqt5]', 'dacite', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'""]","# napari-trait2d [![License BSD-3](https://img.shields.io/pypi/l/napari-trait2d.svg?color=green)](https://github.com/jacopoabramo/napari-trait2d/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-trait2d.svg?color=green)](https://pypi.org/project/napari-trait2d) @@ -37032,7 +38481,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10']","['Bug Tracker, https://github.com/jacopoabramo/napari-trait2d/issues', 'Documentation, https://github.com/jacopoabramo/napari-trait2d#README.md', 'Source Code, https://github.com/jacopoabramo/napari-trait2d', 'User Support, https://github.com/jacopoabramo/napari-trait2d/issues']",,,napari-trait2d.trait2d_widget,,,,,https://pypi.org/project/napari-trait2d,https://github.com/jacopoabramo/napari-trait2d, -375,Turing Patterns,0.3.2,2022-08-19,2023-06-18,napari-turing,Léo Guignard,leo.guignard@univ-amu.fr,MIT,https://github.com/leoguignard/napari-turing,A plugin to run simmple simulations of Turing patterns,>=3.8,"['numpy', 'scipy', 'scikit-image', 'magicgui', 'qtpy', 'napari', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-turing +393,Turing Patterns,0.3.2,2022-08-19,2023-06-18,napari-turing,Léo Guignard,leo.guignard@univ-amu.fr,MIT,https://github.com/leoguignard/napari-turing,A plugin to run simmple simulations of Turing patterns,>=3.8,"['numpy', 'scipy', 'scikit-image', 'magicgui', 'qtpy', 'napari', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-turing [![License MIT](https://img.shields.io/pypi/l/napari-turing.svg?color=green)](https://github.com/leoguignard/napari-turing/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-turing.svg?color=green)](https://pypi.org/project/napari-turing) @@ -37259,7 +38708,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/leoguignard/napari-turing/issues', 'Documentation, https://github.com/leoguignard/napari-turing#README.md', 'Source Code, https://github.com/leoguignard/napari-turing', 'User Support, https://github.com/leoguignard/napari-turing/issues']",,,napari-turing.TuringViewer,,,,,https://pypi.org/project/napari-turing,https://github.com/leoguignard/napari-turing, -376,napari tyssue,0.1.2,2023-04-18,2023-06-18,napari-tyssue,Kyle Harrington,czi@kyleharrington.com,BSD-3-Clause,https://github.com/kephale/napari-tyssue,A napari plugin for use with the tyssue library,>=3.8,"['numpy', 'magicgui', 'qtpy', 'tyssue', 'quantities', 'pooch', 'tables', 'imageio-ffmpeg', 'invagination (==0.0.2)', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-tyssue +394,napari tyssue,0.1.2,2023-04-18,2023-06-18,napari-tyssue,Kyle Harrington,czi@kyleharrington.com,BSD-3-Clause,https://github.com/kephale/napari-tyssue,A napari plugin for use with the tyssue library,>=3.8,"['numpy', 'magicgui', 'qtpy', 'tyssue', 'quantities', 'pooch', 'tables', 'imageio-ffmpeg', 'invagination (==0.0.2)', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-tyssue [![License BSD-3](https://img.shields.io/pypi/l/napari-tyssue.svg?color=green)](https://github.com/kephale/napari-tyssue/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-tyssue.svg?color=green)](https://pypi.org/project/napari-tyssue) @@ -37344,7 +38793,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/kephale/napari-tyssue/issues', 'Documentation, https://github.com/kephale/napari-tyssue#README.md', 'Source Code, https://github.com/kephale/napari-tyssue', 'User Support, https://github.com/kephale/napari-tyssue/issues']",,,napari-tyssue.make_apoptosis_widget,,,,,https://pypi.org/project/napari-tyssue,https://github.com/kephale/napari-tyssue, -377,U-FISH,0.0.1,2023-11-20,2023-11-20,napari-ufish,Weize Xu,vet.xwz@gmail.com,MIT,https://pypi.org/project/napari-ufish,Deep learning-based FISH spot calling method.,>=3.9,"['numpy', 'magicgui', 'qtpy', 'scikit-image', 'ufish', 'napari', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-ufish +395,U-FISH,0.0.1,2023-11-20,2023-11-20,napari-ufish,Weize Xu,vet.xwz@gmail.com,MIT,https://pypi.org/project/napari-ufish,Deep learning-based FISH spot calling method.,>=3.9,"['numpy', 'magicgui', 'qtpy', 'scikit-image', 'ufish', 'napari', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-ufish [![License MIT](https://img.shields.io/pypi/l/napari-ufish.svg?color=green)](https://github.com/UFISH-Team/napari-ufish/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-ufish.svg?color=green)](https://pypi.org/project/napari-ufish) @@ -37419,7 +38868,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']",,,,napari-ufish.make_inference_widget,napari-ufish.make_sample_data,,,,https://pypi.org/project/napari-ufish,, -378,Napari UI tracer,0.1.2,2023-03-23,2023-06-18,napari-ui-tracer,Daniel Althviz,dalthviz@gmail.com,MIT,https://github.com/dalthviz/napari-ui-tracer,A plugin to help understand Napari UI components and check their source code definition,>=3.8,"['qtpy (>=2.3.0)', ""pre-commit ; extra == 'pre-commit'"", ""pyqt5 ; extra == 'pyqt5'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'""]","# napari-ui-tracer +396,Napari UI tracer,0.1.2,2023-03-23,2023-06-18,napari-ui-tracer,Daniel Althviz,dalthviz@gmail.com,MIT,https://github.com/dalthviz/napari-ui-tracer,A plugin to help understand Napari UI components and check their source code definition,>=3.8,"['qtpy (>=2.3.0)', ""pre-commit ; extra == 'pre-commit'"", ""pyqt5 ; extra == 'pyqt5'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'""]","# napari-ui-tracer [![License MIT](https://img.shields.io/pypi/l/napari-ui-tracer.svg?color=green)](https://github.com/dalthviz/napari-ui-tracer/raw/main/LICENSE) [![Python Version](https://img.shields.io/pypi/pyversions/napari-ui-tracer.svg?color=green)](https://python.org) @@ -37508,7 +38957,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [PyPI]: https://pypi.org/ [conda]: https://docs.conda.io/projects/conda/en/stable/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/dalthviz/napari-ui-tracer/issues', 'Documentation, https://github.com/dalthviz/napari-ui-tracer#README.md', 'Source Code, https://github.com/dalthviz/napari-ui-tracer', 'User Support, https://github.com/dalthviz/napari-ui-tracer/issues']",,,napari-ui-tracer.make_qwidget,,,,,https://pypi.org/project/napari-ui-tracer,https://github.com/dalthviz/napari-ui-tracer, -379,UMAP,0.0.1,,,napari-umap,Jordao Bragantini,jordao.bragantini@czbiohub.org,BSD-3-Clause,,A simple plugin to use with napari,>=3.8,"['numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-umap +397,UMAP,0.0.1,,,napari-umap,Jordao Bragantini,jordao.bragantini@czbiohub.org,BSD-3-Clause,,A simple plugin to use with napari,>=3.8,"['numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-umap [![License BSD-3](https://img.shields.io/pypi/l/napari-umap.svg?color=green)](https://github.com/royerlab/napari-umap/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-umap.svg?color=green)](https://pypi.org/project/napari-umap) @@ -37576,7 +39025,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/royerlab/napari-umap/issues', 'Documentation, https://github.com/royerlab/napari-umap#README.md', 'Source Code, https://github.com/royerlab/napari-umap', 'User Support, https://github.com/royerlab/napari-umap/issues']",,,napari-umap.make_qwidget,,,,,https://pypi.org/project/napari-umap,, -380,unicell,0.0.1.post3,2023-04-24,2023-06-18,napari-unicell,Jun Ma,junma.ma@mail.utoronto.ca,Apache-2.0,https://github.com/JunMa11/napari-unicell,universal cell segmentation models,>=3.8,"['torch', 'imagecodecs', 'scipy', 'numpy', 'magicgui', 'qtpy', 'scikit-image', 'monai', 'einops', 'PyQt5', 'napari', 'napari-plugin-engine', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-unicell +398,unicell,0.0.1.post3,2023-04-24,2023-06-18,napari-unicell,Jun Ma,junma.ma@mail.utoronto.ca,Apache-2.0,https://github.com/JunMa11/napari-unicell,universal cell segmentation models,>=3.8,"['torch', 'imagecodecs', 'scipy', 'numpy', 'magicgui', 'qtpy', 'scikit-image', 'monai', 'einops', 'PyQt5', 'napari', 'napari-plugin-engine', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-unicell [![License Apache Software License 2.0](https://img.shields.io/pypi/l/napari-unicell.svg?color=green)](https://github.com/JunMa11/napari-unicell/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-unicell.svg?color=green)](https://pypi.org/project/napari-unicell) @@ -37640,7 +39089,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/JunMa11/napari-unicell/issues', 'Documentation, https://github.com/JunMa11/napari-unicell#README.md', 'Source Code, https://github.com/JunMa11/napari-unicell', 'User Support, https://github.com/JunMa11/napari-unicell/issues']",,,napari-unicell.unicell_widget,,,,,https://pypi.org/project/napari-unicell,https://github.com/JunMa11/napari-unicell, -381,Utrack Loader,0.0.1,,,napari-utrack-loader,Jules Vanaret,jules.vanaret@univ-amu.fr,MIT,,"A simple plugin to load images, detections and tracks from the u-track software into napari",>=3.9,"['numpy', 'magicgui', 'qtpy', 'tifffile', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-utrack-loader +399,Utrack Loader,0.0.1,,,napari-utrack-loader,Jules Vanaret,jules.vanaret@univ-amu.fr,MIT,,"A simple plugin to load images, detections and tracks from the u-track software into napari",>=3.9,"['numpy', 'magicgui', 'qtpy', 'tifffile', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-utrack-loader [![License MIT](https://img.shields.io/pypi/l/napari-utrack-loader.svg?color=green)](https://github.com/jules-vanaret/napari-utrack-loader/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-utrack-loader.svg?color=green)](https://pypi.org/project/napari-utrack-loader) @@ -37708,7 +39157,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/jules-vanaret/napari-utrack-loader/issues', 'Documentation, https://github.com/jules-vanaret/napari-utrack-loader#README.md', 'Source Code, https://github.com/jules-vanaret/napari-utrack-loader', 'User Support, https://github.com/jules-vanaret/napari-utrack-loader/issues']",,,napari-utrack-loader.UtrackLoader,,,,,https://pypi.org/project/napari-utrack-loader,, -382,napari validate random label predictions,0.0.1,2023-04-17,2023-06-18,napari-validate-random-label-predictions,Niklas Netter,niknett@gmail.com,BSD-3-Clause,https://github.com/gatoniel/napari-validate-random-label-predictions,Validate separate instances of label predictions manually,>=3.8,"['numpy', 'magicgui', 'qtpy', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-validate-random-label-predictions +400,napari validate random label predictions,0.0.1,2023-04-17,2023-06-18,napari-validate-random-label-predictions,Niklas Netter,niknett@gmail.com,BSD-3-Clause,https://github.com/gatoniel/napari-validate-random-label-predictions,Validate separate instances of label predictions manually,>=3.8,"['numpy', 'magicgui', 'qtpy', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-validate-random-label-predictions [![License BSD-3](https://img.shields.io/pypi/l/napari-validate-random-label-predictions.svg?color=green)](https://github.com/gatoniel/napari-validate-random-label-predictions/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-validate-random-label-predictions.svg?color=green)](https://pypi.org/project/napari-validate-random-label-predictions) @@ -37776,7 +39225,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/gatoniel/napari-validate-random-label-predictions/issues', 'Documentation, https://github.com/gatoniel/napari-validate-random-label-predictions#README.md', 'Source Code, https://github.com/gatoniel/napari-validate-random-label-predictions', 'User Support, https://github.com/gatoniel/napari-validate-random-label-predictions/issues']",,,napari-validate-random-label-predictions.make_qwidget,,,,,https://pypi.org/project/napari-validate-random-label-predictions,https://github.com/gatoniel/napari-validate-random-label-predictions, -383,VASCilia,1.0.0,,,Napari-VASCilia,Yasmin Kassim,ymkgz8@mail.missouri.edu," +401,VASCilia,1.3.0,,,Napari-VASCilia,Yasmin Kassim,ymkgz8@mail.missouri.edu," Copyright (c) 2024, Yasmin Kassim All rights reserved. @@ -37804,7 +39253,7 @@ SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. -",,VASCilia (Vision Analysis StereoCilia): A Napari Plugin for Deep Learning-Based 3D Analysis of Cochlear Hair Cell Stereocilia Bundles,>=3.9,"['numpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# VASCilia (Vision Analysis StereoCilia): A Napari Plugin for Deep Learning-Based 3D Analysis of Cochlear Hair Cell Stereocilia Bundles +",,VASCilia (Vision Analysis StereoCilia): A Napari Plugin for Deep Learning-Based 3D Analysis of Cochlear Hair Cell Stereocilia Bundles,>=3.9,"['numpy', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""']","# VASCilia (Vision Analysis StereoCilia): A Napari Plugin for Deep Learning-Based 3D Analysis of Cochlear Hair Cell Stereocilia Bundles

@@ -37829,7 +39278,7 @@ Furthermore, we are committed to supporting research growth with a comprehensive VASCilia is here to support researchers in their quest for deeper understanding and innovation in the study of cochlear structures. *[click the image to see a highlights reel of the plugin](https://youtu.be/MwMOxJQ_elo)* -[![Watch the video](images/VASCilia_pipeline.png)](https://youtu.be/MwMOxJQ_elo) +[![Watch the video](images/VASCilia_pipeline2.png)](https://youtu.be/MwMOxJQ_elo) *[Click me to see a video demo of the entire workflow](https://youtu.be/mNPJ1g0vEW8)* @@ -37840,7 +39289,7 @@ wsl --install -d Ubuntu-20.04 2. After the setup successfully completes, reboot your computer. Open Ubuntu by typing ""Ubuntu"" in the search bar. A pop-up window for Ubuntu will appear. To check if CUDA and the GPU are correctly installed and available, type nvidia-smi in the terminal STEP2[Download the deep learning trained models]: -1. Download the VASCilia_trained_models from https://www.dropbox.com/scl/fo/xh40g5htgw6lnzxfaqf8f/h?rlkey=9di5nl7f1uq2v623cfc9gki7j&dl=0 +1. Download the VASCilia_trained_models from https://www.dropbox.com/scl/fo/jsvldda8yvma3omfijxxn/ALeDfYUbiOuj69Flbc728rs?rlkey=mtilfz33qiizpul7uyisud5st&st=41kjlbw0&dl=0 now you should have a folder called 'models' - 📁 **models** `[Trained models]` @@ -37849,13 +39298,15 @@ now you should have a folder called 'models' - 📁 **region_prediction** `[has weights for region prediction]` - 📁 **seg_model** `[has the weights for the 3D instance segmentation model]` - 📁 **Train_predict_stereocilia_exe** `[executible needed by the plugin to segment and retrain the model using WSL]` + - 📁 **ZFT_trim_model** `[deep learning model weights for z focus tracker algorithm]` + - 📁 **rotation_correction_model** `[deep learning model weights for correcting the orientation of the stack]` STEP3[download one dataset to test VASCilia]: download one sample from our datasets to try in this link https://www.dropbox.com/scl/fo/pg3i39xaf3vtjydh663n9/h?rlkey=agtnxau73vrv3ism0h55eauek&dl=0 create a folder, called raw_data folder and put the downloaded dataset inside the raw_data folder - 📁 **raw_data** `[raw data (stacks) is placed here]` - - 📄 Litter 12 Mouse 1 MIDDLE - delBUNdelCAP_Airyscan Processing.czi + - 📄 Litter 12 Mouse 4 MIDDLE - delBUNdelCAP_Airyscan Processing.czi Also create another folder called processed_data in which the plugin will use to store the results of the analysis @@ -37875,9 +39326,10 @@ napari ## Option B: Installing via PyPI: ```sh conda create -y -n napari-VASCilia -c conda-forge python=3.10 -conda activate napari-VASCilia +conda activate napari-VASCilia +# Download the requirements.txt file from this repository and ensure you have it in your working directory. pip install -r requirements.txt -pip install napari-vascilia +pip install Napari-VASCilia napari ``` Post-installation: @@ -37893,22 +39345,28 @@ Please update the /.../ portion according to your paths: ```sh { -""rootfolder"": ""C:/Users/.../processed_data/"", -""wsl_executable"": ""C:/Users/.../models/Train_predict_stereocilia_exe/Train_Predict_stereocilia_exe_v2"", -""model"": ""C:/Users/.../models/seg_model/stereocilia_v7/"", -""model_output_path"": ""C:/Users/.../models/new_seg_model/stereocilia_v8/"", -""model_region_prediction"": ""C:/Users/.../models/region_prediction/resnet50_best_checkpoint_resnet50_balancedclass.pth"", -""model_celltype_identification"": ""C:/Users/.../models/cell_type_identification_model/"", -""flag_to_resize"": false, -""flag_to_pad"": false, -""resize_dimension"": 1200, -""pad_dimension"": 1500, -""button_width"": 60, -""button_height"": 22 + ""rootfolder"": ""C:/Users/.../processed_data/"", + ""wsl_executable"": ""C:/Users/.../models/Train_predict_stereocilia_exe/Train_Predict_stereocilia_exe_v2"", + ""model"": ""C:/Users/.../models/seg_model/stereocilia_v7/"", + ""model_output_path"": ""C:/Users/.../models/new_seg_model/stereocilia_v8/"", + ""model_region_prediction"": ""C:/Users/.../models/region_prediction/resnet50_best_checkpoint_resnet50_balancedclass.pth"", + ""model_celltype_identification"": ""C:/Users/.../models/cell_type_identification_model/"", + ""ZFT_trim_model"": ""C:/Users/.../models/ZFT_trim_model/"", + ""rotation_correction_model"": ""C:/Users/.../models/rotation_correction_model/"", + ""green_channel"": 0, + ""red_channel"": 1, + ""blue_channel"": -1, + ""signal_intensity_channel"": 0, + ""flag_to_resize"": false, + ""flag_to_pad"": false, + ""resize_dimension"": 1200, + ""pad_dimension"": 1500, + ""button_width"": 100, + ""button_height"": 35 } ``` -Congratulations :) 🎉, now you are ready to run: Run Napari_VASCilia_v1_0_0.py +Congratulations :) 🎉, now you can enjoy working with the plugin. ## Unique about VASCilia : VASCilia saves all the intermediate results and the variables inside a pickle file while the user is using it in a very effiecint way. That allows a super fast uploading for the analysis if the user or their supervisor wants to keep working or review the analysis steps. @@ -37921,8 +39379,8 @@ There are several buttons inside the blugin in the right hand side of Napari: 1. 'Open CZI Cochlea Files and Preprocess' button: read the CZI file. 2. 'Upload Processed CZI Stack' button: Incase you already have processed the stack, then just uplead your Analysis_state.pkl that usually has all the variables needed to upload your analysis -3. 'Trim Full Stack' button: this button allows you to choose only the slices of interest (will be automated in the near future) -4. ""Rotate' buttom: this button allows to rotate the stack to have proper analysis (will be automated in the near future) +3. 'Trim Full Stack' button: this button allows you to choose only the slices of interest (has been automated in v_1_1_0) +4. ""Rotate' buttom: this button allows to rotate the stack to have proper analysis (has been automated in v_1_1_0) 5. Segment with 3DBundleSeg: it is a two steps algorithm (2D detection + multi-object assignment algorithm across all slices) to produce robust 3D detection. 3DBundleSeg is the first instance segmentation model for stereocilia bundles in the literature. It is trained on P5 and P21 3D stacks (thousands of 2D instances) and it produces highly acccurate boundary delineation even in the most challenging datasets. Here are some examples:

@@ -37978,6 +39436,24 @@ The training section is for the research ear community incase their datasets are VASCilia also equipped with two more buttons for resetting (to facilitate transitions between analyzing several stacks) and also exit VASCilia. We are still working on the documentation, so this gihub will be continiuosly updated. +## Multi-Batch Processing Feature: Required File +The **Multi-Batch Processing** feature in this package requires an additional file: `track_me_SORT_v3_exe.exe`. This file is **not included** in the repository or the pip installation due to size constraints. +### Download the File +You can download the file from the following link: +[Download track_me_SORT_v3_exe.exe]*[[https://www.dropbox.com/your-file-link](https://www.dropbox.com/scl/fo/sud3ziayvo7efcsbzgrd7/ACeJ6uMjNLcyk7ev0upJREE?rlkey=e6nzvpz8aoebzq4w3o5f339le&st=1qtmf3mf&dl=0)] +### If You Clone the Repository +1. Download the file from the link above. +2. Place the file in the following directory within the cloned repository: src/napari_vascilia/core/ +### If You Installed the Package via pip +1. Download the file from the link above. +2. Locate the installation directory for the package. You can find the installation path by running the following Python code: +```python +import napari_vascilia +print(napari_vascilia.__file__) +``` +3. Place the downloaded file in the following directory: /src/napari_vascilia/core/ +Note: All other features of the package will function as expected without this file. This file is exclusively for batch processing of multiple files. + ## Testing Other Lab Data Liberman Data *[Click me to see a video demo of the entire workflow](https://youtu.be/PIG3q7G6Xr0)* Artur Indzhykulian Data *[Click me to see a video demo of the entire workflow](https://youtu.be/WseYK4Zn-3o)* @@ -38020,7 +39496,7 @@ revisions and updates to the manuscript. ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']",,,,Napari-VASCilia.initialize_ui,,,,,https://pypi.org/project/Napari-VASCilia,, -384,napari vedo bridge,0.2.1,2023-08-02,2023-08-02,napari-vedo-bridge,"Johannes Soltwedel, Marco Musy",johannes_richard.soltwedel@tu-dresden.de," +402,napari vedo bridge,0.2.1,2023-08-02,2023-08-02,napari-vedo-bridge,"Johannes Soltwedel, Marco Musy",johannes_richard.soltwedel@tu-dresden.de," Copyright (c) 2023, Johannes Soltwedel, Marco Musy All rights reserved. @@ -38169,7 +39645,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/jo-mueller/napari-vedo-bridge/issues', 'Documentation, https://github.com/jo-mueller/napari-vedo-bridge#README.md', 'Source Code, https://github.com/jo-mueller/napari-vedo-bridge', 'User Support, https://github.com/jo-mueller/napari-vedo-bridge/issues']",napari-vedo-bridge.load_points,napari-vedo-bridge.write_points,napari-vedo-bridge.cutter_widget,napari-vedo-bridge.data.mouse_limb1,['*.vtp'],['.vtp'],"['.vtp', '.vtk', '.obj', '.stl', '.ply']",https://pypi.org/project/napari-vedo-bridge,https://github.com/jo-mueller/napari-vedo-bridge, -385,napari-vemseg,0.0.9,,,napari-vemseg,Matous Elphick,matous.elphick@gmail.com,BSD-3-Clause,,A simple plugin for semi-automated segmentation of volume electron microscopy images.,>=3.8,"['torch', 'numpy', 'scikit-image', 'magicgui', 'qtpy', 'napari', 'tqdm', 'apoc', 'superqt', 'setuptools', 'vemseg']"," +403,napari-vemseg,0.0.9,,,napari-vemseg,Matous Elphick,matous.elphick@gmail.com,BSD-3-Clause,,A simple plugin for semi-automated segmentation of volume electron microscopy images.,>=3.8,"['torch', 'numpy', 'scikit-image', 'magicgui', 'qtpy', 'napari', 'tqdm', 'apoc', 'superqt', 'setuptools', 'vemseg']"," # napari-vemseg @@ -38240,7 +39716,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Topic :: Scientific/Engineering :: Image Processing']",,,,napari-vemseg.vemseg_pixel_classifier,,,,,https://pypi.org/project/napari-vemseg,, -386,Vesicles Segmentation,0.0.1,2022-08-18,2023-06-18,napari-vesicles-segmentation,Alexis Japas,alexis.japas@proton.me,BSD-3-Clause,https://github.com/alexisjapas/napari-vesicles-segmentation,A simple plugin to detect vesicles in cells images.,>=3.8,"['numpy', 'magicgui', 'qtpy', 'scikit-image', 'scipy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""scikit-image ; extra == 'testing'"", ""scipy ; extra == 'testing'""]","# napari-vesicles-segmentation +404,Vesicles Segmentation,0.0.1,2022-08-18,2023-06-18,napari-vesicles-segmentation,Alexis Japas,alexis.japas@proton.me,BSD-3-Clause,https://github.com/alexisjapas/napari-vesicles-segmentation,A simple plugin to detect vesicles in cells images.,>=3.8,"['numpy', 'magicgui', 'qtpy', 'scikit-image', 'scipy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""scikit-image ; extra == 'testing'"", ""scipy ; extra == 'testing'""]","# napari-vesicles-segmentation [![License BSD-3](https://img.shields.io/pypi/l/napari-vesicles-segmentation.svg?color=green)](https://github.com/alexisjapas/napari-vesicles-segmentation/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-vesicles-segmentation.svg?color=green)](https://pypi.org/project/napari-vesicles-segmentation) @@ -38324,7 +39800,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/alexisjapas/napari-vesicles-segmentation/issues', 'Documentation, https://github.com/alexisjapas/napari-vesicles-segmentation#README.md', 'Source Code, https://github.com/alexisjapas/napari-vesicles-segmentation', 'User Support, https://github.com/alexisjapas/napari-vesicles-segmentation/issues']",,,napari-vesicles-segmentation.make_qwidget,,,,,https://pypi.org/project/napari-vesicles-segmentation,https://github.com/alexisjapas/napari-vesicles-segmentation, -387,napari VideoCVDask,0.2.1,,,napari-video-cvdask,Nicholas A. Del Grosso,delgrosso.nick@gmail.com,MIT,,A Video File Reader that uses OpenCV2 and Dask Arrays,>=3.7,"['dask-image', 'av']","# napari-video-cvdask +405,napari VideoCVDask,0.2.1,,,napari-video-cvdask,Nicholas A. Del Grosso,delgrosso.nick@gmail.com,MIT,,A Video File Reader that uses OpenCV2 and Dask Arrays,>=3.7,"['dask-image', 'av']","# napari-video-cvdask [![License](https://img.shields.io/pypi/l/napari-video-cvdask.svg?color=green)](https://github.com/nickdelgrosso/napari-video-cvdask/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-video-cvdask.svg?color=green)](https://pypi.org/project/napari-video-cvdask) @@ -38369,7 +39845,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['Bug Tracker, https://github.com/nickdelgrosso/napari-video-cvdask/issues', 'Documentation, https://github.com/nickdelgrosso/napari-video-cvdask#README.md', 'Source Code, https://github.com/nickdelgrosso/napari-video-cvdask', 'User Support, https://github.com/nickdelgrosso/napari-video-cvdask/issues']",napari-video-cvdask.get_reader,,,,"['*.mp4', '*.mov', '*.avi']",,,https://pypi.org/project/napari-video-cvdask,, -388,VoDEx,1.0.12,2023-04-17,2023-06-18,napari-vodex,Anna Nadtochiy,lemonjustgithub@gmail.com,BSD-3-Clause,https://github.com/LemonJust/napari-vodex,A napari plugin for VoDEx : Volumetric Data and Experiment Manager. Allows to load volumetric data based on experimental conditions.,>=3.8,"['vodex (>=1.0.12)', 'numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-vodex +406,VoDEx,1.0.12,2023-04-17,2023-06-18,napari-vodex,Anna Nadtochiy,lemonjustgithub@gmail.com,BSD-3-Clause,https://github.com/LemonJust/napari-vodex,A napari plugin for VoDEx : Volumetric Data and Experiment Manager. Allows to load volumetric data based on experimental conditions.,>=3.8,"['vodex (>=1.0.12)', 'numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-vodex [![License BSD-3](https://img.shields.io/pypi/l/napari-vodex.svg?color=green)](https://github.com/LemonJust/napari-vodex/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-vodex.svg?color=green)](https://pypi.org/project/napari-vodex) @@ -38441,7 +39917,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 3 - Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/LemonJust/napari-vodex/issues', 'Documentation, https://lemonjust.github.io/vodex/napari/', 'Source Code, https://github.com/LemonJust/napari-vodex', 'User Support, https://github.com/LemonJust/napari-vodex/issues']",,,napari-vodex.vodex_qwidget,,,,,https://pypi.org/project/napari-vodex,https://github.com/LemonJust/napari-vodex, -389,napari-workflow-inspector,0.2.2,2022-02-05,2023-06-18,napari-workflow-inspector,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,https://github.com/haesleinhuepf/napari-workflow-inspector,Inspect relationships between image processing operations in active workflows in napari,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari-tools-menu', 'networkx', 'matplotlib', 'napari-workflows']","# napari-workflow-inspector +407,napari-workflow-inspector,0.2.2,2022-02-05,2023-06-18,napari-workflow-inspector,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,https://github.com/haesleinhuepf/napari-workflow-inspector,Inspect relationships between image processing operations in active workflows in napari,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari-tools-menu', 'networkx', 'matplotlib', 'napari-workflows']","# napari-workflow-inspector [![License](https://img.shields.io/pypi/l/napari-workflow-inspector.svg?color=green)](https://github.com/haesleinhuepf/napari-workflow-inspector/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-workflow-inspector.svg?color=green)](https://pypi.org/project/napari-workflow-inspector) @@ -38505,7 +39981,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Topic :: Scientific/Engineering :: Medical Science Apps.', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/haesleinhuepf/napari-workflow-inspector/issues', 'Documentation, https://github.com/haesleinhuepf/napari-workflow-inspector#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-workflow-inspector', 'User Support, https://github.com/haesleinhuepf/napari-workflow-inspector/issues']",,,napari-workflow-inspector.WorkflowWidget,,,,,https://pypi.org/project/napari-workflow-inspector,https://github.com/haesleinhuepf/napari-workflow-inspector, -390,napari-workflow-optimizer,0.1.4,2022-02-14,2023-06-18,napari-workflow-optimizer,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,https://github.com/haesleinhuepf/napari-workflow-optimizer,Optimize image processing workflows in napari for segmentation quality,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'pyclesperanto-prototype', 'scikit-learn', 'napari-time-slicer', 'matplotlib', 'scipy', 'napari-workflows', 'napari-assistant (>=0.1.9)']","# napari-workflow-optimizer +408,napari-workflow-optimizer,0.1.4,2022-02-14,2023-06-18,napari-workflow-optimizer,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,https://github.com/haesleinhuepf/napari-workflow-optimizer,Optimize image processing workflows in napari for segmentation quality,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'pyclesperanto-prototype', 'scikit-learn', 'napari-time-slicer', 'matplotlib', 'scipy', 'napari-workflows', 'napari-assistant (>=0.1.9)']","# napari-workflow-optimizer [![License](https://img.shields.io/pypi/l/napari-workflow-optimizer.svg?color=green)](https://github.com/haesleinhuepf/napari-workflow-optimizer/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-workflow-optimizer.svg?color=green)](https://pypi.org/project/napari-workflow-optimizer) @@ -38681,7 +40157,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 3 - Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/haesleinhuepf/napari-workflow-optimizer/issues', 'Documentation, https://github.com/haesleinhuepf/napari-workflow-optimizer#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-workflow-optimizer', 'User Support, https://github.com/haesleinhuepf/napari-workflow-optimizer/issues']",,,napari-workflow-optimizer.WorkflowOptimizer,,,,,https://pypi.org/project/napari-workflow-optimizer,https://github.com/haesleinhuepf/napari-workflow-optimizer, -391,Napari Workshop Browser,0.0.3,2023-07-17,2023-10-18,napari-workshop-browser,Kyle Harrington,napari@kyleharrington.com,BSD-3-Clause,https://github.com/kephale/napari-workshop-browser,A plugin to browse and follow napari workshops,>=3.8,"['numpy', 'superqt', 'qtpy', 'notebook <7.0.0', 'jupytext', 'napari', 'appdirs', 'requests', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-workshop-browser +409,Napari Workshop Browser,0.0.3,2023-07-17,2023-10-18,napari-workshop-browser,Kyle Harrington,napari@kyleharrington.com,BSD-3-Clause,https://github.com/kephale/napari-workshop-browser,A plugin to browse and follow napari workshops,>=3.8,"['numpy', 'superqt', 'qtpy', 'notebook <7.0.0', 'jupytext', 'napari', 'appdirs', 'requests', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-workshop-browser [![License BSD-3](https://img.shields.io/pypi/l/napari-workshop-browser.svg?color=green)](https://github.com/kephale/napari-workshop-browser/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-workshop-browser.svg?color=green)](https://pypi.org/project/napari-workshop-browser) @@ -38759,7 +40235,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/kephale/napari-workshop-browser/issues', 'Documentation, https://github.com/kephale/napari-workshop-browser#README.md', 'Source Code, https://github.com/kephale/napari-workshop-browser', 'User Support, https://github.com/kephale/napari-workshop-browser/issues']",,,napari-workshop-browser.make_qwidget,,,,,https://pypi.org/project/napari-workshop-browser,https://github.com/kephale/napari-workshop-browser, -392,Workshop 2023 demo plugin,1.0.4,,,napari-workshop-plugin,MetaCell,sean.martin@metacell.us,MIT,,A plugin to demonstrate some concepts from the 2023 workshop on software development related to napari,>=3.8,"['numpy <2,>=1.23', 'magicgui', 'qtpy', ""mkdocs-material ; extra == 'docs'"", ""mkdocstrings-python ; extra == 'docs'"", ""mkdocstrings ; extra == 'docs'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-workshop-plugin +410,Workshop 2023 demo plugin,1.0.4,,,napari-workshop-plugin,MetaCell,sean.martin@metacell.us,MIT,,A plugin to demonstrate some concepts from the 2023 workshop on software development related to napari,>=3.8,"['numpy <2,>=1.23', 'magicgui', 'qtpy', ""mkdocs-material ; extra == 'docs'"", ""mkdocstrings-python ; extra == 'docs'"", ""mkdocstrings ; extra == 'docs'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-workshop-plugin [![License MIT](https://img.shields.io/pypi/l/napari-workshop-plugin.svg?color=green)](https://github.com/MetaCell/napari-workshop-plugin/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-workshop-plugin.svg?color=green)](https://pypi.org/project/napari-workshop-plugin) @@ -38808,7 +40284,7 @@ If you encounter any problems, please file an issue along with a detailed descri [cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin [pip]: https://pypi.org/project/pip/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/seankmartin/napari-software-development-workshop/issues', 'Documentation, https://seankmartin.github.io/napari-software-development-workshop/', 'Source Code, https://github.com/seankmartin/napari-software-development-workshop', 'User Support, https://napari.zulipchat.com']",napari-workshop-plugin.get_reader,,napari-workshop-plugin.make_widget,napari-workshop-plugin.sample_data,['*.npy'],,,https://pypi.org/project/napari-workshop-plugin,, -393,WSI Reader,0.1.4,2023-03-30,2023-08-22,napari-wsi,Philipp Plewa,philipp.plewa@astrazeneca.com,Apache-2.0,https://github.com/AstraZeneca/napari-wsi,A plugin to read whole slide images within napari.,">=3.10,<3.12","['dask[array] (>=2023)', 'imagecodecs (>=2023.9.18)', 'magicgui (>=0.7.3)', 'matplotlib (>=3.8)', 'napari (>=0.4.18)', 'numpy (>=1.26)', 'rasterio (>=1.3)', 'tifffile (>=2023)', 'zarr (>=2.16)']","# napari-wsi +411,WSI Reader,0.1.4,2023-03-30,2023-08-22,napari-wsi,Philipp Plewa,philipp.plewa@astrazeneca.com,Apache-2.0,https://github.com/AstraZeneca/napari-wsi,A plugin to read whole slide images within napari.,">=3.10,<3.12","['dask[array] (>=2023)', 'imagecodecs (>=2023.9.18)', 'magicgui (>=0.7.3)', 'matplotlib (>=3.8)', 'napari (>=0.4.18)', 'numpy (>=1.26)', 'rasterio (>=1.3)', 'tifffile (>=2023)', 'zarr (>=2.16)']","# napari-wsi [![PyPI](https://img.shields.io/pypi/v/napari-wsi.svg?color=green)](https://pypi.org/project/napari-wsi) [![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-wsi)](https://napari-hub.org/plugins/napari-wsi) @@ -38871,7 +40347,7 @@ viewer.open(""CMU-1.svs"") [tifffile]: https://github.com/cgohlke/tifffile ","['Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: Apache Software License', 'Operating System :: OS Independent', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']","['Repository, https://github.com/AstraZeneca/napari-wsi']",napari-wsi.get_wsi_reader,,napari-wsi.get_wsi_reader_widget,,"['*.bif', '*.ndpi', '*.qptiff', '*.scn', '*.svs', '*.tif', '*.tiff']",,,https://pypi.org/project/napari-wsi,https://github.com/AstraZeneca/napari-wsi, -394,napari-wsireg,0.1.2,,,napari-wsireg,Nathan Heath Patterson,heath.patterson@vanderbilt.edu,BSD-3-Clause,,plugin to perform whole slide image registration with wsireg,>=3.8,"['wsireg (>=0.3.6)', 'SimpleITK', 'czifile', 'dask', 'imagecodecs', 'napari', 'numpy', 'ome-types', 'pint', 'qtpy', 'tifffile', 'zarr (>=2.10.3)', 'napari-geojson', 'networkx', 'matplotlib']","# napari-wsireg +412,napari-wsireg,0.1.2,,,napari-wsireg,Nathan Heath Patterson,heath.patterson@vanderbilt.edu,BSD-3-Clause,,plugin to perform whole slide image registration with wsireg,>=3.8,"['wsireg (>=0.3.6)', 'SimpleITK', 'czifile', 'dask', 'imagecodecs', 'napari', 'numpy', 'ome-types', 'pint', 'qtpy', 'tifffile', 'zarr (>=2.10.3)', 'napari-geojson', 'networkx', 'matplotlib']","# napari-wsireg ![Alt text](https://github.com/NHPatterson/napari-wsireg/blob/main/src/napari_wsireg/gui/resources/wsireg-logo-light.svg?raw=true ""wsireg"") @@ -38949,7 +40425,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 4 - Beta', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Topic :: Software Development :: Testing']","['Bug Tracker, https://github.com/nhpatterson/napari-wsireg/issues', 'Documentation, https://github.com/nhpatterson/napari-wsireg#README.md', 'Source Code, https://github.com/nhpatterson/napari-wsireg', 'User Support, https://github.com/nhpatterson/napari-wsireg/issues']",,,napari-wsireg.make_qwidget,,,,,https://pypi.org/project/napari-wsireg,, -395,Pixel Classification XGBoost,0.1.0,,,napari-xgboost,Robert Haase,robert.haase@uni-leipzig.de," +413,Pixel Classification XGBoost,0.1.0,,,napari-xgboost,Robert Haase,robert.haase@uni-leipzig.de," Copyright (c) 2024, Robert Haase, ScaDS.AI, Uni Leipzig All rights reserved. @@ -39052,7 +40528,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/haesleinhuepf/napari-xgboost/issues', 'Documentation, https://github.com/haesleinhuepf/napari-xgboost#README.md', 'Source Code, https://github.com/haesleinhuepf/napari-xgboost', 'User Support, https://github.com/haesleinhuepf/napari-xgboost/issues']",,,napari-xgboost.make_function_widget,,,,,https://pypi.org/project/napari-xgboost,, -396,napari-yapic-prediction,0.2.0,2022-02-11,2023-06-18,napari-yapic-prediction,"Duway Nicolas Lesmes Leon, Pranjal Dhole","dlesmesleon@hotmail.com, dhole.pranjal@gmail.com",GNU GPL v3.0,https://github.com/yapic/napari-yapic-prediction,napari widget that performs image segmentation with yapic model in the napari window. Install TENSORFLOW to use this plugin.,>=3.6,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari[all]', 'yapic', 'scikit-image']","# napari-yapic-prediction +414,napari-yapic-prediction,0.2.0,2022-02-11,2023-06-18,napari-yapic-prediction,"Duway Nicolas Lesmes Leon, Pranjal Dhole","dlesmesleon@hotmail.com, dhole.pranjal@gmail.com",GNU GPL v3.0,https://github.com/yapic/napari-yapic-prediction,napari widget that performs image segmentation with yapic model in the napari window. Install TENSORFLOW to use this plugin.,>=3.6,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari[all]', 'yapic', 'scikit-image']","# napari-yapic-prediction [![License](https://img.shields.io/pypi/l/napari-yapic-prediction.svg?color=green)](https://github.com/yapic/napari-yapic-prediction/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-yapic-prediction.svg?color=green)](https://pypi.org/project/napari-yapic-prediction) @@ -39120,7 +40596,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']",,,,napari-yapic-prediction.MyWidget,,,,,https://pypi.org/project/napari-yapic-prediction,https://github.com/yapic/napari-yapic-prediction, -397,Yolo5 Mitosis Detector,0.0.1,,,napari-yolo5-mitosis-detector,Titouan Poquillon,titouan.poquillon@gmail.com,BSD-3-Clause,,A simple plugin to use yolo5 for mitosis detection with napari,>=3.9,"['numpy ==1.26.2', 'magicgui ==0.8.0', 'qtpy ==2.4.1', 'scikit-image ==0.20.0', 'opencv-python ==4.8.1.78', 'torch ==2.1.1', 'ultralytics ==8.0.222', 'shapely ==2.0.2', 'importlib-resources ==6.1.1', 'pandas ==2.1.3', 'napari-aicsimageio ==0.7.2', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-yolo5-mitosis-detector +415,Yolo5 Mitosis Detector,0.0.1,,,napari-yolo5-mitosis-detector,Titouan Poquillon,titouan.poquillon@gmail.com,BSD-3-Clause,,A simple plugin to use yolo5 for mitosis detection with napari,>=3.9,"['numpy ==1.26.2', 'magicgui ==0.8.0', 'qtpy ==2.4.1', 'scikit-image ==0.20.0', 'opencv-python ==4.8.1.78', 'torch ==2.1.1', 'ultralytics ==8.0.222', 'shapely ==2.0.2', 'importlib-resources ==6.1.1', 'pandas ==2.1.3', 'napari-aicsimageio ==0.7.2', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-yolo5-mitosis-detector [![License BSD-3](https://img.shields.io/pypi/l/napari-yolo5-mitosis-detector.svg?color=green)](https://github.com/TPoquillon/napari-yolo5-mitosis-detector/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-yolo5-mitosis-detector.svg?color=green)](https://pypi.org/project/napari-yolo5-mitosis-detector) @@ -39190,7 +40666,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/TPoquillon/napari-yolo5-mitosis-detector/issues', 'Documentation, https://github.com/TPoquillon/napari-yolo5-mitosis-detector#README.md', 'Source Code, https://github.com/TPoquillon/napari-yolo5-mitosis-detector', 'User Support, https://github.com/TPoquillon/napari-yolo5-mitosis-detector/issues']",,,napari-yolo5-mitosis-detector.make_yolov5_qwidget,,,,,https://pypi.org/project/napari-yolo5-mitosis-detector,, -398,napari-yolov5,0.2.14,2022-05-16,2023-06-18,napari-yolov5,Richard De Mets,demets.richard@gmail.com,GPL-3.0-only,https://github.com/rdemets/napari-yolov5,Plugin adapted from Ultralytics to bring YOLOv5 into Napari,>=3.7,"['connected-components-3d >=3.6.0', 'flask >=2.2.2', 'imageio-ffmpeg >=0.4.7', 'matplotlib >=3.2.2', 'napari-plugin-engine >=0.1.4', 'napari >=0.4.15', 'numpy >=1.18.5', 'opencv-python >=4.1.2', 'Pillow >=7.1.2', 'PyYAML >=5.3.1', 'qtpy >=2.2.1', 'requests >=2.23.0', 'scikit-image >=0.19.3', 'scipy >=1.4.1', 'tensorboard >=1.15.0', 'tensorflow >=2.10.0', 'torch >=1.9.0', 'torchvision >=0.8.1', 'tqdm >=4.41.0', 'seaborn >=0.11.2', 'wandb >=0.13.4']","# napari-yolov5 +416,napari-yolov5,0.2.14,2022-05-16,2023-06-18,napari-yolov5,Richard De Mets,demets.richard@gmail.com,GPL-3.0-only,https://github.com/rdemets/napari-yolov5,Plugin adapted from Ultralytics to bring YOLOv5 into Napari,>=3.7,"['connected-components-3d>=3.6.0', 'flask>=2.2.2', 'imageio-ffmpeg>=0.4.7', 'matplotlib>=3.2.2', 'napari-plugin-engine>=0.1.4', 'napari>=0.4.15', 'numpy>=1.18.5', 'opencv-python>=4.1.2', 'Pillow>=7.1.2', 'PyYAML>=5.3.1', 'qtpy>=2.2.1', 'requests>=2.23.0', 'scikit-image>=0.19.3', 'scipy>=1.4.1', 'tensorboard>=1.15.0', 'tensorflow>=2.10.0', 'torch>=1.9.0', 'torchvision>=0.8.1', 'tqdm>=4.41.0', 'seaborn>=0.11.2', 'wandb>=0.13.4']","# napari-yolov5 [![License](https://img.shields.io/pypi/l/napari-yolov5.svg?color=green)](https://github.com/rdemets/napari-yolov5/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-yolov5.svg?color=green)](https://pypi.org/project/napari-yolov5) @@ -39315,7 +40791,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)']",,,,napari-yolov5.widget_wrapper,,,,,https://pypi.org/project/napari-yolov5,https://github.com/rdemets/napari-yolov5, -399,napari-zelda,0.1.12,2022-02-10,2023-11-10,napari-zelda,"Rocco D'Antuono, Giuseppina Pisignano",rocco.dantuono@hotmail.it,BSD-3-Clause,https://github.com/RoccoDAnt/napari-zelda,ZELDA: a 3D Image Segmentation and Parent-Child relation plugin for microscopy image analysis in napari,>=3.7,"['datatable', 'json5', 'magicgui', 'matplotlib >=3.4.3', 'napari !=0.4.11', 'napari-plugin-engine >=0.1.4', 'numpy', 'pandas', 'scikit-image', 'scipy']","# napari-zelda +417,napari-zelda,0.1.12,2022-02-10,2023-11-10,napari-zelda,"Rocco D'Antuono, Giuseppina Pisignano",rocco.dantuono@hotmail.it,BSD-3-Clause,https://github.com/RoccoDAnt/napari-zelda,ZELDA: a 3D Image Segmentation and Parent-Child relation plugin for microscopy image analysis in napari,>=3.7,"['datatable', 'json5', 'magicgui', 'matplotlib>=3.4.3', 'napari!=0.4.11', 'napari-plugin-engine>=0.1.4', 'numpy', 'pandas', 'scikit-image', 'scipy']","# napari-zelda [![License](https://img.shields.io/pypi/l/napari-zelda.svg?color=green)](https://github.com/RoccoDAnt/napari-zelda/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-zelda.svg?color=green)](https://pypi.org/project/napari-zelda) @@ -39471,7 +40947,103 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 3 - Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']",,,,napari-zelda.launch_ZELDA,,,,,https://pypi.org/project/napari-zelda,https://github.com/RoccoDAnt/napari-zelda, -400,napari-zulip,0.0.2,2023-05-05,2023-06-18,napari-zulip,Kyle Harrington,czi@kyleharrington.com,BSD-3-Clause,https://github.com/kephale/napari-zulip,A simple plugin for interacting with Zulip from napari,>=3.9,"['numpy', 'magicgui', 'qtpy', 'zulip', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-zulip +418,napari-zplane-depth-colorizer,0.0.1,,,napari-zplane-depth-colorizer,Mai Hoang,maihan.hoang1208@gmail.com," +Copyright (c) 2024, Mai Hoang +All rights reserved. + +Redistribution and use in source and binary forms, with or without +modification, are permitted provided that the following conditions are met: + +* Redistributions of source code must retain the above copyright notice, this + list of conditions and the following disclaimer. + +* Redistributions in binary form must reproduce the above copyright notice, + this list of conditions and the following disclaimer in the documentation + and/or other materials provided with the distribution. + +* Neither the name of copyright holder nor the names of its + contributors may be used to endorse or promote products derived from + this software without specific prior written permission. + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ""AS IS"" +AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE +IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE +DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE +FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL +DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR +SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER +CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, +OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE +OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. +",,A simple plugin to color and merge z-planes of 3D data to give depth information.,>=3.9,"['numpy', 'magicgui', 'qtpy', 'scikit-image', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# napari-zplane-depth-colorizer + +[![License BSD-3](https://img.shields.io/pypi/l/napari-zplane-depth-colorizer.svg?color=green)](https://github.com/maihanhoang/napari-zplane-depth-colorizer/raw/main/LICENSE) +[![PyPI](https://img.shields.io/pypi/v/napari-zplane-depth-colorizer.svg?color=green)](https://pypi.org/project/napari-zplane-depth-colorizer) +[![Python Version](https://img.shields.io/pypi/pyversions/napari-zplane-depth-colorizer.svg?color=green)](https://python.org) +[![tests](https://github.com/maihanhoang/napari-zplane-depth-colorizer/workflows/tests/badge.svg)](https://github.com/maihanhoang/napari-zplane-depth-colorizer/actions) +[![codecov](https://codecov.io/gh/maihanhoang/napari-zplane-depth-colorizer/branch/main/graph/badge.svg)](https://codecov.io/gh/maihanhoang/napari-zplane-depth-colorizer) +[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-zplane-depth-colorizer)](https://napari-hub.org/plugins/napari-zplane-depth-colorizer) + +A simple plugin for 3d+t files that visualizes z-planes in 3 colors for depth information. + +---------------------------------- + +This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template. + + + +## Installation + +You can install `napari-zplane-depth-colorizer` via [pip]: + + pip install napari-zplane-depth-colorizer + + + +To install latest development version : + + pip install git+https://github.com/maihanhoang/napari-zplane-depth-colorizer.git + + +## Contributing + +Contributions are very welcome. Tests can be run with [tox], please ensure +the coverage at least stays the same before you submit a pull request. + +## License + +Distributed under the terms of the [BSD-3] license, +""napari-zplane-depth-colorizer"" is free and open source software + +## Issues + +If you encounter any problems, please [file an issue] along with a detailed description. + +[napari]: https://github.com/napari/napari +[Cookiecutter]: https://github.com/audreyr/cookiecutter +[@napari]: https://github.com/napari +[MIT]: http://opensource.org/licenses/MIT +[BSD-3]: http://opensource.org/licenses/BSD-3-Clause +[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt +[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt +[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0 +[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt +[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin + +[file an issue]: https://github.com/maihanhoang/napari-zplane-depth-colorizer/issues + +[napari]: https://github.com/napari/napari +[tox]: https://tox.readthedocs.io/en/latest/ +[pip]: https://pypi.org/project/pip/ +[PyPI]: https://pypi.org/ +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/maihanhoang/napari-zplane-depth-colorizer/issues', 'Documentation, https://github.com/maihanhoang/napari-zplane-depth-colorizer#README.md', 'Source Code, https://github.com/maihanhoang/napari-zplane-depth-colorizer', 'User Support, https://github.com/maihanhoang/napari-zplane-depth-colorizer/issues']",,,napari-zplane-depth-colorizer.make_qwidget,,,,,https://pypi.org/project/napari-zplane-depth-colorizer,, +419,napari-zulip,0.0.2,2023-05-05,2023-06-18,napari-zulip,Kyle Harrington,czi@kyleharrington.com,BSD-3-Clause,https://github.com/kephale/napari-zulip,A simple plugin for interacting with Zulip from napari,>=3.9,"['numpy', 'magicgui', 'qtpy', 'zulip', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# napari-zulip [![License BSD-3](https://img.shields.io/pypi/l/napari-zulip.svg?color=green)](https://github.com/kephale/napari-zulip/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/napari-zulip.svg?color=green)](https://pypi.org/project/napari-zulip) @@ -39553,11 +41125,13 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/kephale/napari-zulip/issues', 'Documentation, https://github.com/kephale/napari-zulip#README.md', 'Source Code, https://github.com/kephale/napari-zulip', 'User Support, https://github.com/kephale/napari-zulip/issues']",,,napari-zulip.screenshot_to_Zulip,,,,,https://pypi.org/project/napari-zulip,https://github.com/kephale/napari-zulip, -401,CellSeg3D,0.2.0,2022-07-11,2024-06-04,napari_cellseg3d,,,MIT,https://github.com/AdaptiveMotorControlLab/CellSeg3d,Plugin for cell segmentation in 3D,,,,,,,,,,,,,https://pypi.org/project/napari_cellseg3d,https://github.com/AdaptiveMotorControlLab/CellSeg3d, -402,napari_hello,0.1.0,,,napari_hello,Your Name,,,,My napari plugin,,,,,,,,,,,,,https://pypi.org/project/napari_hello,, -403,napari_psf_analysis,1.1.3,2022-07-07,2023-06-18,napari_psf_analysis,Tim-Oliver Buchholz,,BSD-3-Clause,https://github.com/fmi-faim/napari-psf-analysis,A plugin to analyse point spread functions (PSFs).,,,,,,,,,,,,,https://pypi.org/project/napari_psf_analysis,https://github.com/fmi-faim/napari-psf-analysis, -404,napari_stress,0.3.8,2023-12-08,2024-01-15,napari_stress,"Johannes Soltwedel, Ben J. Gross, Elijah Shelton, Carlos Gomez, Otger Campas",,BSD-3-Clause,https://pypi.org/project/napari-stress,Interactive surface analysis in napari for measuring mechanical stresses in biological tissues,,,,,,,,,,,,,https://pypi.org/project/napari-stress,, -405,napari_video,0.2.9,2022-02-05,2023-06-18,napari_video,Jan Clemens,clemensjan@googlemail.com,,https://github.com/janclemenslab/napari-video,napari plugin for reading videos.,>=3.6,"['numpy', 'pyvideoreader']","# napari-video +420,CellSeg3D,0.2.1,2022-07-11,2024-06-04,napari_cellseg3d,,,MIT,https://github.com/AdaptiveMotorControlLab/CellSeg3d,Plugin for cell segmentation in 3D,,,,,,,,,,,,,https://pypi.org/project/napari_cellseg3d,https://github.com/AdaptiveMotorControlLab/CellSeg3d, +421,napari_hello,0.1.0,,,napari_hello,Your Name,,,,My napari plugin,,,,,,,,,,,,,https://pypi.org/project/napari_hello,, +422,napari_psf_analysis,1.1.4,2022-07-07,2023-06-18,napari_psf_analysis,Tim-Oliver Buchholz,,BSD-3-Clause,https://github.com/fmi-faim/napari-psf-analysis,A plugin to analyse point spread functions (PSFs).,,,,,,,,,,,,,https://pypi.org/project/napari_psf_analysis,https://github.com/fmi-faim/napari-psf-analysis, +423,napari_pyclesperanto_assistant,0.25.0,2022-04-01,2024-12-27,napari_pyclesperanto_assistant,"Robert Haase, Talley Lambert",,BSD-3-Clause,https://github.com/clesperanto/napari_pyclesperanto_assistant,GPU-accelerated image processing in napari using OpenCL,,,,,,,,,,,,,https://pypi.org/project/napari_pyclesperanto_assistant,https://github.com/clesperanto/napari_pyclesperanto_assistant, +424,napari_stress,0.3.8,2023-12-08,2024-01-15,napari_stress,"Johannes Soltwedel, Ben J. Gross, Elijah Shelton, Carlos Gomez, Otger Campas",,BSD-3-Clause,https://pypi.org/project/napari-stress,Interactive surface analysis in napari for measuring mechanical stresses in biological tissues,,,,,,,,,,,,,https://pypi.org/project/napari-stress,, +425,napari_svetlana,1.2.0,,,napari_svetlana,Clément Cazorla,,GPL-3.0-only,,A classification plugin for the ROIs of a segmentation mask.,,,,,,,,,,,,,https://pypi.org/project/napari_svetlana,, +426,napari_video,0.2.10,2022-02-05,2023-06-18,napari_video,Jan Clemens,clemensjan@googlemail.com,,https://github.com/janclemenslab/napari-video,napari plugin for reading videos.,>=3.6,"['numpy', 'pyvideoreader']","# napari-video [![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari_video)](https://napari-hub.org/plugins/napari_video) Napari plugin for working with videos. @@ -39606,7 +41180,7 @@ Then ","['License :: OSI Approved :: MIT License', 'Framework :: napari', 'Operating System :: OS Independent']","['Bug Tracker, https://github.com/janclemenslab/napari-video/issues', 'Documentation, https://github.com/janclemenslab/napari-video/blob/main/README.md', 'Source Code, https://github.com/janclemenslab/napari-video', 'User Support, https://github.com/janclemenslab/napari-video/issues']",napari_video.napari_get_reader,,,,['*'],,,https://pypi.org/project/napari_video,https://github.com/janclemenslab/napari-video, -406,napping,0.2.4,,,napping,Jonas Windhager,jonas.windhager@uzh.ch,MIT,,Control point mapping and coordination transformation using napari,>=3.8,"['imagecodecs', 'imageio', 'napari[all] (>=0.4.16)', 'numpy', 'pandas', 'qtpy', 'scikit-image']","# napping +427,napping,0.2.4,,,napping,Jonas Windhager,jonas.windhager@uzh.ch,MIT,,Control point mapping and coordination transformation using napari,>=3.8,"['imagecodecs', 'imageio', 'napari[all] (>=0.4.16)', 'numpy', 'pandas', 'qtpy', 'scikit-image']","# napping [![PyPI](https://img.shields.io/pypi/v/napping.svg?color=green)](https://pypi.org/project/napping) [![License](https://img.shields.io/pypi/l/napping.svg?color=green)](https://github.com/BodenmillerGroup/napping/raw/main/LICENSE) @@ -39646,7 +41220,7 @@ Created and maintained by Jonas Windhager [jonas.windhager@uzh.ch](mailto:jonas. [MIT](https://github.com/BodenmillerGroup/napping/blob/main/LICENSE.md) ","['Development Status :: 4 - Beta', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Topic :: Scientific/Engineering :: Image Processing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: MIT License']","['Bug Tracker, https://github.com/BodenmillerGroup/napping/issues', 'Documentation, https://github.com/BodenmillerGroup/napping/#README.md', 'Source Code, https://github.com/BodenmillerGroup/napping', 'User Support, https://github.com/BodenmillerGroup/napping/issues']",,,,,,,,https://pypi.org/project/napping,, -407,natari,0.2.7,2022-02-02,2023-06-18,natari,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,https://github.com/haesleinhuepf/natari,Napari gaming,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari', 'scipy', 'napari-tools-menu']","# natari +428,natari,0.2.7,2022-02-02,2023-06-18,natari,Robert Haase,robert.haase@tu-dresden.de,BSD-3-Clause,https://github.com/haesleinhuepf/natari,Napari gaming,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari', 'scipy', 'napari-tools-menu']","# natari [![License](https://img.shields.io/pypi/l/natari.svg?color=green)](https://github.com/haesleinhuepf/natari/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/natari.svg?color=green)](https://pypi.org/project/natari) @@ -39727,7 +41301,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 3 - Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/haesleinhuepf/natari/issues', 'Documentation, https://github.com/haesleinhuepf/natari#README.md', 'Source Code, https://github.com/haesleinhuepf/natari', 'User Support, https://github.com/haesleinhuepf/natari/issues']",,,natari.napari_experimental_provide_function,,,,,https://pypi.org/project/natari,https://github.com/haesleinhuepf/natari, -408,Nellie,0.3.2,,,nellie,Austin E. Y. T. Lefebvre,austin.e.lefebvre+nellie@gmail.com,,,"Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy",>=3.9,"['numpy==1.26.4', 'scipy==1.12.0', 'scikit-image==0.22.0', 'nd2==0.9.0', 'ome-types==0.5.2', 'pandas==2.2.1', 'matplotlib==3.8.3', 'napari[all]', 'imagecodecs', 'pydantic==2.9.2', 'pydantic-core==2.23.4']","# Nellie +429,Nellie,0.4.1,,,nellie,Austin E. Y. T. Lefebvre,austin.e.lefebvre+nellie@gmail.com,,,"Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy",>=3.9,"['numpy==1.26.4', 'scipy==1.12.0', 'scikit-image==0.22.0', 'nd2==0.9.0', 'ome-types==0.5.2', 'pandas==2.2.1', 'matplotlib==3.8.3', 'napari[all]', 'imagecodecs', 'pydantic==2.9.2', 'pydantic-core==2.23.4']","# Nellie ## Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy *arXiv* @@ -39748,14 +41322,30 @@ https://github.com/aelefebv/nellie/assets/26515909/1df8bf1b-7116-4d19-b5fb-9658f - It is recommended (but usually not required) to [create a new environment](https://docs.python.org/3/library/venv.html) for Nellie to avoid conflicts with other packages. - May take several minutes to install. - Choose one of the following methods, and only one! +- If you do not already have Python 3.9 or higher installed, download it via the [python website]([url](https://www.python.org/downloads/)). + +https://github.com/user-attachments/assets/50b1cd4b-6df7-4f19-8db3-4dcc03388513 + + ### Option 1. Via Napari plugin manager: If not already installed, install Napari: https://napari.org/stable/tutorials/fundamentals/installation + +https://github.com/user-attachments/assets/0d44abe5-f575-4bd4-962a-2c102faf737c + + 1. Open Napari 2. Go to ```Plugins > Install/Uninstall Plugins...``` 3. Search for Nellie and click ```Install``` +4. Make sure Nellie is updated to the latest version. +5. Restart Napari. ### Option 2. Via PIP: + + +https://github.com/user-attachments/assets/b63df093-e3e1-49cb-925b-7efce36b9015 + + ```bash -pip install nellie +python3 -m pip install nellie ``` #### Option 2a for NVIDIA GPU acceleration, optional (Windows, Linux): To use GPU acceleration via NVIDIA GPUs, you also need to install cupy: @@ -39770,15 +41360,23 @@ pip install cupy-cudaXXx ## Usage The sample dataset shown below is in the repo if you want to play around without, and can be downloaded [here](https://github.com/aelefebv/nellie/tree/main/sample_data). -https://github.com/aelefebv/nellie/assets/26515909/05199fed-ed8c-4237-b3ba-0a3f4cdcb337 - ### General data preparation - It is strongly recommended to have your data in a parsable format, such as .ome.tif, .nd2, or other raw data files from microscopes. - Importing into ImageJ/FIJI and saving via BioFormats with the proper image dimensions should do the trick. - If the metadata cannot be parsed, you will have to manually enter it. - It is also recommended to crop your image as much as possible to reduce processing time and memory usage. But really, unless you have massive lightsheet data, it should be pretty fast (seconds to minutes on a typical modern desktop computer). -https://github.com/aelefebv/nellie/assets/26515909/372d07a8-15a0-4926-8594-108dd4b97280 +### 3D + Timeseries dataset + +https://github.com/user-attachments/assets/531f76ee-f58e-4058-b5dc-4fdf09af3660 + +### 3D (no Timeseries) dataset + +https://github.com/user-attachments/assets/30d55bfa-bade-4987-88f0-255bb36cb7e8 + +### 2D + Timeseries dataset + +https://github.com/user-attachments/assets/d534c6e1-df31-4964-9c12-edff56228be3 ### Running Nellie's processing pipeline 1. Start Napari (open a Terminal and type napari) @@ -39791,15 +41389,13 @@ https://github.com/aelefebv/nellie/assets/26515909/372d07a8-15a0-4926-8594-108dd - If the metadata boxes do not fill in automatically and turn red, this means Nellie did not detect that metadata portion from your image, and you must manually enter it or reformat your image and try again. - The metadata slot will appear green if it is in the correct format. - *Note, if you are batch processing, the metadata must be the same for all images if any of them are in an incorrect format (this will be fixed eventually). If they are different, but all pass validation, then it will process fine. - - You can preview 2 time points of your image via the ```Open preview``` button once the metadata is filled in to ensure it looks correct. + - You can preview your image via the ```Open preview``` button once the metadata is filled in to ensure it looks correct. + - From this tab, you can also choose what time points and channel you want to analyze, if your file contains more than one slice in those dimensions. 4. Click the ```Process``` tab. - - If you have multiple fluorescence channels, select the channel you want to process/analyze. - - If you only want to analyze up to a certain timepoint, you can set this in slider. By default it will run all timepoints. - - If you have odd noise on the edges of your image, check the ```Remove image edges``` checkbox. 5. You can run the full pipeline with ```Run Nellie```, or run individual steps below. - Steps can only be run once its previous step has been run. - Likewise, visualizations in the ```Visualization``` tab can only be opened once its respective step has been run. -6. All intermediate files and output csvs will be saved to ```[image_directory]/nellie_output/```. +6. All intermediate files and output csvs will be saved to ```[image_directory]/nellie_output/```, which can be accessed via the ```Open output directory``` button. - A separate .csv is created for each level of the organellar hierarchy. 7. Once features have been exported, Nellie will automatically detect this, and allow analysis via the ```Analyze``` tab. - Analysis at this point is optional, but can be helpful for visualizing, and selectively exporting data. @@ -39814,16 +41410,12 @@ https://github.com/aelefebv/nellie/assets/26515909/372d07a8-15a0-4926-8594-108dd 4. ```Mocap Markers```: Visualize the mocap markers used for waypoints. 5. ```Reassigned Labels```: Visualize the organelle and branch instance segmentation masks where voxels are reassigned based on the first timepoint. 4. To visualize tracks, open and select one of the segmentation layers. -5. ```Alt+Click``` on a label to visualize the track of that selected organelle/branch across all timepoints. - - If the segmentation labels are selected, it will generate tracks for all voxels in the selected timepoint only. - - If the reassigned labels are selected, you can choose to generate tracks for all voxels across all timepoints. - - You can skip voxels to track so that the area is not too crowded by tracks. - - *Note: If you have a 3D image, toggle to 2D mode via the ```Toggle 2D/3D view``` at the bottom left before ```Alt+Click```ing (eventually I'll get it to work while in 3D mode). +5. To visualize all tracks of all organelles/branches, click the ```Visualize all frame labels' tracks``` button. +6. To visualize all tracks of a specific organelle/branch: + 1. Click on the layer, and use the eyedropper tool at the top to select an organelle/branch to track. + 2. Click the ```Visualize selected label's tracks```. ### Using Nellie's analysis plugin - -https://github.com/aelefebv/nellie/assets/26515909/7f4f09a4-3687-4635-988d-e1d16ad2a4af - 1. Follow the previous processing steps, you only need to do this once per file as long as you don't move or delete the files. 2. Open the ```Analyze``` tab, select the hierarchy level you want to visualize from the dropdown. 3. Select the level-specific feature you want to visualize from the new dropdown. @@ -39892,8 +41484,184 @@ https://github.com/aelefebv/nellie/assets/26515909/db76d388-a9cc-4650-b93d-69d35 https://github.com/aelefebv/nellie/assets/26515909/58bda3cb-6489-4620-8584-a3728cd6b2ec +## Code contents: +Full documentation can be found within the code, and compiled by Sphinx in the file docs/_build/html/index.html + +### Nellie pipeline +All the Nellie pipeline code is found within the nellie folder +- File and metadata loading, and file preparation is found at nellie/im_info/verifier.py +- Preprocessing is found at nellie/segmentation/filtering.py +- Segmentation of organelles is found at nellie/segmentation/labelling.py +- Skeletonization and segmentation of branches is found at nellie/segmentation/networking.py +- Mocap marker detection is found at nellie/segmentation/mocap_marking.py +- Mocap marker tracking is found at nellie/tracking/hu_tracking.py +- Voxel reassignment via flow interpolation is found at nellie/tracking/voxel_reassignment.py +- Hierarchical feature extraction is found at nellie/feature_extraction/hierarchical.py + +### Nellie Napari plugin +All the Napari plugin code is found with the nellie_napari folder +- The home tab is found at nellie_napari/nellie_home.py +- The file selection tab is found at nellie_napari/nellie_fileselect.py +- The processing tab is found at nellie_napari/nellie_processor.py +- The visualization tab is found at nellie_napari/nellie_visualizer.py +- The analysis tab is found at nellie_napari/nellie_analysis.py +- The settings tab is found at nellie_napari/nellie_settings.py ",['Framework :: napari'],,,,nellie.loader,,,,,https://pypi.org/project/nellie,, -409,nfinder,0.3,2022-02-04,2023-06-18,nfinder,Santiago N. Rodriguez Alvarez,rodriguezsantiago96@gmail.com,,https://github.com/santi-rodriguez/nfinder,Automatic inference of neighboring cells based on their Delaunay triangulation.,>=3.7,,"# Nfinder +430,neurofly,0.1.3,,,neurofly,Rubin Zhao,Rubin Zhao ,GPL-3.0-or-later,,A framework to annotate single neurons at whole-brain scale,>=3.8,"['PyQt5', 'napari', 'Rtree', 'networkx', 'tqdm', 'magicgui', 'brightest-path-lib', 'tifffile', 'scikit-image', 'scipy', 'torch', 'tinygrad>=0.9.2', 'pathlib', 'h5py', 'zarr']","# NeuroFly: A framework for single neuron reconstruction at whole-brain scale + +This package provides tools for semi-automatic neuron reconstruction. Features based on deep learning, like image segmentation and deconvolution are implemented in [tinygrad](https://github.com/tinygrad/tinygrad), which can run on almost any GPU (NVIDIA, AMD, Apple, Qualcomm, Intel). + + + +## Installation + +Install the latest version +``` +pip install --upgrade git+https://github.com/beanli161514/neurofly.git +``` +or +``` +pip install neurofly +``` + +## Dataset + +We provide several expert-proofread reconstruction results for testing, model training, and evaluation. [Zenodo Link](https://zenodo.org/records/13328867) + + +### Content of samples +| name | size | species | label type | imaging | +|----------------|-------|---------|-------------|---------| +| rm009_labeled | 629MB | macaque | skeleton | VISoR | +| mouse_labeled | 260MB | mouse | skeleton | VISoR | +| z002_labeled | 204MB | mouse | skeleton | VISoR | +| fmost_labeled | 370MB | mouse | skeleton | fMOST | +| RM009_noisy_1 | 65MB | macaque | morphology | VISoR | +| RM009_noisy_2 | 65MB | macaque | morphology | VISoR | +| fmost_test | 65MB | mouse | morphology | fMOST | +| z002_dendrites | 768MB | mouse | morphology | VISoR | +| RM009_arbor_1 | 288MB | macaque | morphology | VISoR | +| RM009_axons_1 | 600MB | macaque | morphology | VISoR | +| RM009_axons_2 | 600MB | macaque | morphology | VISoR | +| z002 | 8.92G | mouse | morphology* | VISoR | + +$*$ annotation in progress +### Label format +Morphology labels are graphs saved in SQLite database with 3 tables: +| segments | nodes | edges | +|:--------------:|:-------:|:-------:| +| sid | nid | src | +| points | coord | des | +| sampled_points | creator | date | +| | status | creator | +| | type | | +| | date | | +| | checked | | + +Segments are results of the segmentation stage, they are used to generate initial nodes and edges. + + +## Basic usage example + + + +NeuroFly packaged 4 napari plugins for image browsing, image segmentation, and data annotation. + + + +### Segmentation + +NeuroFly supports whole brain image saved in hierarchical data structures(ims, h5, and zarr) in [Imaris File Format](https://imaris.oxinst.com/support/imaris-file-format) and small image volumes saved in single-channel tiff format. Here we use a mouse brain in our dataset named z002.zarr.zip as example. + +This brain is sparsely labeled, which means only a tiny puny part of neurons are lighted and imaged. To extract these foreground singals, you can use the provided command line interface 'seg'. We provide a default weight trained on images captured by VISoR and fMOST. +``` +seg -i z002.zarr.zip -vis -d z002.db +``` +or use the graphical interface + + + + +This process may take about 10 hours depending on your you hardware configuration. When finished, you should see the extracted segments and a database file named z002.db in your working dictionary. + + +An image block with severe contamination and the segmentation result + + + + +### Manual connection and proofreading + +Launch annotation tool from napari menu, Plugin -> neurofly -> Segs Annotator + +#### Load data +Load image file (z002.zarr.zip) and database file (z002.db), then click **refresh panorama** button to show the panorama view. + + + + +#### Select one node as start point of annotation +In panorama mode, you can easily identify sparse, bright signals that are promising for reconstruction. The silde bars 'short segs filter', 'length thres', and 'point size' can be adjusted to hide noise and short segments. + +If you can clearly identify foreground segments, click on one of the conspicuous segments to select it as start point of annotation. Once selected, the id of picked node will be displayed at **node selection**. Then click 'switch mode' to switch to labeling mode, and the tasks will be generated automatically. + + +#### Task generation +Given a selected node, task generator analyses its connected component and extract all unchecked terminal nodes. The tasks are designed very simple: Connect the center node with the surrounding nodes if there should be an edge. The criterion is whether the edge aligns well with the imaged neuron fibers. + + + + +#### Node operations + + +In each task, a center node and nearby segments are rendered, you can add/remove nodes and edges to get a reasonable local structure. + + +Left click on nodes to add/remove an edge between it and the center node + + + +Right click to remove a node + + + +Press 'g' or use left panel to switch to 'image' layer, then right click to add points + + + +Use dropdown selection in right panel to add type label for center node. + + + +#### Deconvolution + +Press 'i' or click on 'deconvolution' to deconvolve the image + + + + +#### Proofreading + +If you find something wrong when labeling, for example, two somas are connected together. You can use proofreading mode to check the neuron branch by branch. + + + + +### Performance +NeuroFly supports rendering of more than ten million points. (tested on M3 Macbook Air and RTX 3090 workstation) + + + + + +### Export as swc file +Switch to panorama mode, adjust 'length_thres' to filter out short segments and keep only complete neurons. Then press 'export swc files', each neuron will be saved as one .swc file in your working dictionary. + + + +","['Framework :: napari', 'Programming Language :: Python :: 3']","['Homepage, https://github.com/beanli161514/neurofly']",,,neurofly.segs_annotator,,,,,https://pypi.org/project/neurofly,, +431,nfinder,0.3,2022-02-04,2023-06-18,nfinder,Santiago N. Rodriguez Alvarez,rodriguezsantiago96@gmail.com,,https://github.com/santi-rodriguez/nfinder,Automatic inference of neighboring cells based on their Delaunay triangulation.,>=3.7,,"# Nfinder Automatic inference of neighboring cells based on their Delaunay triangulation. ## Dependencies @@ -39923,7 +41691,7 @@ For usage examples, please check out the [notebook](https://github.com/santi-rod ","['Development Status :: 4 - Beta', 'Programming Language :: Python :: 3.7', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Framework :: napari']",,,,nfinder.find,,,,,https://pypi.org/project/nfinder,https://github.com/santi-rodriguez/nfinder, -410,Offset-Subtraction,0.0.5,2022-02-10,2023-06-18,Offset-Subtraction,"Marc Boucsein, Robin Koch",,BSD-3,https://github.com/MBPhys/Offset-Subtraction,A napari plugin in oder to subtract an intensity offset such as autofluorescence,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'dask']","# Offset-Subtraction +432,Offset-Subtraction,0.0.5,2022-02-10,2023-06-18,Offset-Subtraction,"Marc Boucsein, Robin Koch",,BSD-3,https://github.com/MBPhys/Offset-Subtraction,A napari plugin in oder to subtract an intensity offset such as autofluorescence,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'dask']","# Offset-Subtraction [![License](https://img.shields.io/pypi/l/napari-medical-image-formats.svg?color=green)](https://github.com/MBPhys/Offset-Subtraction/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/Offset-Subtraction.svg?color=green)](https://pypi.org/project/Offset-Subtraction) @@ -39972,7 +41740,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']",,,,Offset-Subtraction.Subtraction,,,,,https://pypi.org/project/Offset-Subtraction,https://github.com/MBPhys/Offset-Subtraction, -411,napari okapi-em,0.0.10,2023-04-04,2023-06-18,okapi-em,Luis Perdigao,luis.perdigao@rfi.ac.uk,Apache-2.0,https://pypi.org/project/okapi-em/,napari plugin to deal with charging artifacts in tomography electron microscopy data,>=3.7,"['numpy', 'magicgui', 'chafer', 'napari[all]', 'opencv-python', 'quoll >=0.0.4', ""imageio-ffmpeg ; extra == 'all'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'""]","# okapi-em +433,napari okapi-em,0.0.10,2023-04-04,2023-06-18,okapi-em,Luis Perdigao,luis.perdigao@rfi.ac.uk,Apache-2.0,https://pypi.org/project/okapi-em/,napari plugin to deal with charging artifacts in tomography electron microscopy data,>=3.7,"['numpy', 'magicgui', 'chafer', 'napari[all]', 'opencv-python', 'quoll >=0.0.4', ""imageio-ffmpeg ; extra == 'all'"", ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'""]","# okapi-em https://github.com/rosalindfranklininstitute/okapi-em @@ -40083,78 +41851,29 @@ If you encounter any problems, please file an issue along with a detailed descri [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: Apache Software License']",,,,okapi-em.main_qwidget,,,,,https://pypi.org/project/okapi-em/,, -412,Infer sub-Cellular Object Npe2 plugin,0.0.5,,,organelle-segmenter-plugin,Andy Henrie,ergonyc@gmail.com,BSD-3,,"A plugin that enables organelle segmentation, forked from tools from Allen Institute for Cell Science",>=3.8,"['napari', 'napari-plugin-engine >=0.1.4', 'aicssegmentation', 'aicsimageio', 'numpy', 'scikit-image', 'aicsimageio >=4.7.0', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# organelle-segmenter-plugin +434,Infer sub-Cellular Object Npe2 plugin,0.0.6,,,organelle-segmenter-plugin,Andy Henrie,ergonyc@gmail.com,BSD-3,,"A plugin that enables organelle segmentation, forked from tools from Allen Institute for Cell Science",>=3.8,"['napari', 'napari-plugin-engine>=0.1.4', 'aicssegmentation', 'aicsimageio', 'numpy', 'scikit-image', 'aicsimageio>=4.7.0', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# organelle-segmenter-plugin -[![License BSD-3](https://img.shields.io/pypi/l/organelle-segmenter-plugin.svg?color=green)](https://github.com/ergonyc/organelle-segmenter-plugin/raw/main/LICENSE) +[![License BSD-3](https://img.shields.io/pypi/l/organelle-segmenter-plugin.svg?color=green)](https://github.com/ndcn/organelle-segmenter-plugin/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/organelle-segmenter-plugin.svg?color=green)](https://pypi.org/project/organelle-segmenter-plugin) [![Python Version](https://img.shields.io/pypi/pyversions/organelle-segmenter-plugin.svg?color=green)](https://python.org) -[![tests](https://github.com/ergonyc/organelle-segmenter-plugin/workflows/tests/badge.svg)](https://github.com/ergonyc/organelle-segmenter-plugin/actions) -[![codecov](https://codecov.io/gh/ergonyc/organelle-segmenter-plugin/branch/main/graph/badge.svg)](https://codecov.io/gh/ergonyc/organelle-segmenter-plugin) +[![tests](https://github.com/ndcn/organelle-segmenter-plugin/workflows/tests/badge.svg)](https://github.com/ndcn/organelle-segmenter-plugin/actions) +[![codecov](https://codecov.io/gh/ndcn/organelle-segmenter-plugin/branch/main/graph/badge.svg)](https://codecov.io/gh/ndcn/organelle-segmenter-plugin) [![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/organelle-segmenter-plugin)](https://napari-hub.org/plugins/organelle-segmenter-plugin) - 🚧 WIP 🚧 -A plugin that enables image segmentation of organelles from linearly-unmixed florescence images based on the segmenter tools provided by Allen Institute for Cell Science. -A [napari](https://napari.org/stable/) plugin to infer subcellular components leveraging [infer-subc](https://github.com/ergonyc/infer-subc) and [aics-segmenter]( https://allencell.org/segmenter ) +### A [napari](https://napari.org/stable/) plugin implementing [`infer-subc`](https://github.com/ndcn/infer-subc) segmentation workflows. +See [`infer-subc`](https://github.com/ndcn/infer-subc) for more information. -## GOAL -To measure shape, position, size, and interaction of organelles/cellular components (Nuclei (nuc, NU), Nucleus (N1), Lysosomes (LS), Mitochondria (mito, MT), Golgi (GL), Peroxisomes (perox, PO), Endoplasmic Reticulum (ER), Lipid Droplet (LD), Cellmask (soma, cellmask), and cytoplasm (cyto, CT) ) during differentiation of iPSCs, in order to understand the Interactome / Spatiotemporal coordination. - -🚧 WIP 🚧 +# FRAMEWORK, RESOURCES & CONTRIBUTIONS -### Forked from Allen Institute for Cell Science project +## Forked from Allen Institute for Cell Science project The Allen Cell & Structure Segmenter plugin for napari, from which this projects is forked, provides an intuitive graphical user interface to access the powerful segmentation capabilities of an open source 3D segmentation software package developed and maintained by the Allen Institute for Cell Science (classic workflows only with v1.0). ​[The Allen Cell & Structure Segmenter](https://allencell.org/segmenter) is a Python-based open source toolkit developed at the Allen Institute for Cell Science for 3D segmentation of intracellular structures in fluorescence microscope images. This toolkit brings together classic image segmentation and iterative deep learning workflows first to generate initial high-quality 3D intracellular structure segmentations and then to easily curate these results to generate the ground truths for building robust and accurate deep learning models. The toolkit takes advantage of the high replicate 3D live cell image data collected at the Allen Institute for Cell Science of over 30 endogenous fluorescently tagged human induced pluripotent stem cell (hiPSC) lines. Each cell line represents a different intracellular structure with one or more distinct localization patterns within undifferentiated hiPS cells and hiPSC-derived cardiomyocytes. More details about Segmenter can be found at https://allencell.org/segmenter ----------------------------------- - -This [napari] plugin was generated with [Cookiecutter] using with [@napari]'s [cookiecutter-napari-plugin] template. - - - -## Installation 🚧 WIP 🚧 - -### Option 1 (recommended): 🚧 WIP 🚧 -`organelle_segmenter_plugin` is available on `PyPI` via: - -```bash -pip install organelle_segmenter_plugin -``` -### Option 2 🚧 COMING SOON 🚧 (not yet available on napari hub) - -After you installed the lastest version of napari, you can go to ""Plugins"" --> ""Install/Uninstall Package(s)"". Then, you will be able to see all available napari plugins and you can find us by name `organelle-segmenter-plugin`. Just click the ""install"" button to install the Segmenter plugin. - -### Option 3: clone repo + editable install - -```bash -git clone https://github.com/ndcn/organelle-segmenter-plugin.git -cd organelle-segmenter-plugin -pip install -e . -``` -## Quick Start - -In the current version, there are two parts in the plugin: **workflow editor** and **batch processing**. The **workflow editor** allows users adjusting parameters in all the existing workflows in the lookup table, so that the workflow can be optimized on users' data. The adjusted workflow can be saved and then applied to a large batch of files using the **batch processing** part of the plugin. +## Issues -1. Open a file in napari by dragging multi-channel .czi file onto napari which will import a multi-channel, multi-Z 'layer'. (Using the menu's defaults to `aicsIMAGEIO` reader which automatically splits mutliple channels into individual layers. The plugin is able to support multi-dimensional data in .tiff, .tif. ome.tif, .ome.tiff, .czi) -2. Start the plugin (open napari, go to ""Plugins"" --> ""organelle-segmenter-plugin"" --> ""workflow editor"") -3. Select the image and channel to work on -4. Select a workflow based on the example image and target segmentation based on user's data. Ideally, it is recommend to start with the example with very similar morphology as user's data. -5. Click ""Run All"" to execute the whole workflow on the sample data. -6. Adjust the parameters of steps, based on the intermediate results. A complete list of all functions can be found [here](https://github.com/ndcn/infer-subc/blob/main/infer_subc/organelles_config/function_params.md)🚧 WIP 🚧 -7. Click ""Run All"" again after adjusting the parameters and repeat step 6 and 7 until the result is satisfactory. -8. Save the workflow -9. Close the plugin and open the **batch processing** part by (go to ""Plugins"" --> ""organelle-segmenter-plugin"" --> ""batch processing"") -10. Load the customized workflow saved above -11. Load the folder with all the images to process -12. Click ""Run"" -13. Follow the [examples](https://github.com/ndcn/infer-subc/blob/main/notebooks/14_final_workflow.ipynb) in the `infer_subc` [repo](https://github.com/ndcn/infer-subc/) for postprocessing of the saved segmentations and generating the statistics. +If you encounter any problems, please [file an issue] along with a detailed description. ## Contributing @@ -40162,12 +41881,11 @@ Contributions are very welcome. ## License -Distributed under the terms of the [BSD-3] license, -""organelle-segmenter-plugin"" is free and open source software +Distributed under the terms of the [BSD-3] license + +""organelle-segmenter-plugin"" is free and open source software. -## Issues -If you encounter any problems, please [file an issue] along with a detailed description. [napari]: https://github.com/napari/napari [Cookiecutter]: https://github.com/audreyr/cookiecutter @@ -40180,7 +41898,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 3 - Alpha', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Topic :: Scientific/Engineering', 'Topic :: Scientific/Engineering :: Visualization', 'Topic :: Scientific/Engineering :: Information Analysis', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/ndcn/organelle-segmenter-plugin/issues', 'Documentation, https://github.com/ndcn/organelle-segmenter-plugin#README.md', 'Source Code, https://github.com/ndcn/organelle-segmenter-plugin', 'User Support, https://github.com/ndcn/organelle-segmenter-plugin/issues']",organelle-segmenter-plugin.get_reader,,organelle-segmenter-plugin.make_batch_widget,,"['*.xyz', '*.czi', '*.tif', '*.tiff']",,,https://pypi.org/project/organelle-segmenter-plugin,, -413,ortho-view-napari,0.1.1,,,ortho-view-napari,Jordao Bragantini,jordao.bragantini@czbiohub.org,BSD-3,,It displays the lateral view of the current 3D stack. This could be a starting point for a orthorviewer.,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy']","# ortho-view-napari +435,ortho-view-napari,0.1.1,,,ortho-view-napari,Jordao Bragantini,jordao.bragantini@czbiohub.org,BSD-3,,It displays the lateral view of the current 3D stack. This could be a starting point for a orthorviewer.,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy']","# ortho-view-napari [![License](https://img.shields.io/pypi/l/ortho-view-napari.svg?color=green)](https://github.com/JoOkuma/ortho-view-napari/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/ortho-view-napari.svg?color=green)](https://pypi.org/project/ortho-view-napari) @@ -40240,7 +41958,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/JoOkuma/ortho-view-napari/issues', 'Documentation, https://github.com/JoOkuma/ortho-view-napari#README.md', 'Source Code, https://github.com/JoOkuma/ortho-view-napari', 'User Support, https://github.com/JoOkuma/ortho-view-napari/issues']",,,ortho-view-napari.Widget,,,,,https://pypi.org/project/ortho-view-napari,, -414,Palmari,0.3.0,2022-07-06,2023-06-18,palmari,Hippolyte Verdier,hverdier@pasteur.fr,"""CeCILL""",https://github.com/hippover/palmari,"Palmari provides a plugin to analyze PALM movies, as well as microscope recordings of other SMLM-based SPT modalities. Set up your pipeline on one file, run it on a folder !",>=3.8,"['click', 'dask (>=2022.1.0)', 'dask-image (>=2021.12.0)', 'imageio-ffmpeg', 'magicgui (>=0.5.0)', 'matplotlib (>=3.5)', 'munkres', 'napari', 'napari-aicsimageio', 'numpy', 'pandas', 'pyyaml', 'qtpy', 'scikit-image (>=0.18.3)', 'scikit-learn', 'toml', 'tqdm', 'trackpy (>=0.5.0)', ""tox ; extra == 'testing'"", ""PyQt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'""]","# Palmari +436,Palmari,0.3.0,2022-07-06,2023-06-18,palmari,Hippolyte Verdier,hverdier@pasteur.fr,"""CeCILL""",https://github.com/hippover/palmari,"Palmari provides a plugin to analyze PALM movies, as well as microscope recordings of other SMLM-based SPT modalities. Set up your pipeline on one file, run it on a folder !",>=3.8,"['click', 'dask (>=2022.1.0)', 'dask-image (>=2021.12.0)', 'imageio-ffmpeg', 'magicgui (>=0.5.0)', 'matplotlib (>=3.5)', 'munkres', 'napari', 'napari-aicsimageio', 'numpy', 'pandas', 'pyyaml', 'qtpy', 'scikit-image (>=0.18.3)', 'scikit-learn', 'toml', 'tqdm', 'trackpy (>=0.5.0)', ""tox ; extra == 'testing'"", ""PyQt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'""]","# Palmari [![Documentation Status](https://readthedocs.org/projects/palmari/badge/?version=latest)](https://palmari.readthedocs.io/en/latest/?badge=latest) [![Python Version](https://img.shields.io/pypi/pyversions/palmari.svg?color=green)](https://python.org) @@ -40312,7 +42030,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [CeCILL]: http://cecill.info/index.en.html [documentation]: https://palmari.readthedocs.io/en/latest/ ","['Development Status :: 4 - Beta', 'Intended Audience :: Science/Research', 'Framework :: napari', 'Environment :: Plugins', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing', 'Operating System :: OS Independent', 'License :: OSI Approved :: CEA CNRS Inria Logiciel Libre License, version 2.1 (CeCILL-2.1)']","['Bug Tracker, https://github.com/hippover/palmari/issues', 'Documentation, https://palmari.readthedocs.io/en/latest/', 'Source Code, https://github.com/hippover/palmari', 'User Support, https://github.com/hippover/palmari/issues']",,,palmari.make_qwidget,,,,,https://pypi.org/project/palmari,https://github.com/hippover/palmari, -415,Partial-Aligner,0.0.1,2022-01-28,2023-06-18,Partial-Aligner,"Marc Boucsein, Robin Koch",,BSD-3,https://github.com/DKFZ-TMTRR/Partial-Aligner,A napari plugin for manual registration of (a part of) an image,>=3.9,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'packaging', 'dask']","# Partial-Aligner +437,Partial-Aligner,0.0.1,2022-01-28,2023-06-18,Partial-Aligner,"Marc Boucsein, Robin Koch",,BSD-3,https://github.com/DKFZ-TMTRR/Partial-Aligner,A napari plugin for manual registration of (a part of) an image,>=3.9,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'packaging', 'dask']","# Partial-Aligner [![License](https://img.shields.io/pypi/l/napari-medical-image-formats.svg?color=green)](https://github.com/MBPhys/Partial-Aligner/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/Partial-Aligner.svg?color=green)](https://pypi.org/project/Partial-Aligner) @@ -40406,7 +42124,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']",,,,Partial-Aligner.Aligner,,,,,https://pypi.org/project/Partial-Aligner,https://github.com/DKFZ-TMTRR/Partial-Aligner, -416,PartSeg,0.15.4,2022-04-01,2024-10-02,PartSeg,Grzegorz Bokota,Grzegorz Bokota ,BSD-3-Clause,https://4dnucleome.cent.uw.edu.pl/PartSeg/,"PartSeg is python GUI and set of napari plugins for bio imaging analysis especially nucleus analysis,",>=3.8,"['IPython >=7.7.0', 'PartSegCore-compiled-backend <0.16.0,>=0.13.11', 'PartSegData ==0.10.0', 'QtAwesome !=1.2.0,>=1.0.3', 'QtPy >=1.10.0', 'SimpleITK >=2.0.0', 'appdirs >=1.4.4', 'czifile >=2019.5.22', 'defusedxml >=0.6.0', 'fonticon-fontawesome6 >=6.1.1', 'h5py >=3.3.0', 'imagecodecs >=2020.5.30', 'imageio >=2.5.0', 'ipykernel >=5.2.0', 'local-migrator >=0.1.7', 'magicgui !=0.5.0,>=0.4.0', 'mahotas >=1.4.10', 'napari >=0.4.14', 'nme >=0.1.7', 'oiffile >=2020.1.18', 'openpyxl >=2.5.7', 'packaging >=20.0', 'pandas >=1.1.0', 'psygnal >=0.3.1', 'pydantic <3,>=1.9.1', 'pygments >=2.12.0', 'qtconsole >=4.7.7', 'requests >=2.25.0', 'scipy >=1.4.1', 'sentry-sdk >=2.4.0', 'six >=1.11.0', 'superqt >=0.3.0', 'sympy >=1.1.1', 'tifffile >=2020.9.30', 'traceback-with-variables >=2.0.4', 'vispy >=0.9.4', 'xlrd >=1.1.0', 'xlsxwriter >=2.0.0', 'numpy <2,>=1.18.5 ; python_version < ""3.10""', 'numpy >=1.18.5 ; python_version >= ""3.10""', ""PartSeg[accelerate,pyqt5] ; extra == 'all'"", ""autodoc-pydantic ; extra == 'docs'"", ""sphinx !=3.0.0,!=3.5.0 ; extra == 'docs'"", ""sphinx-autodoc-typehints ; extra == 'docs'"", ""sphinx-qt-documentation ; extra == 'docs'"", ""PartSeg[pyinstaller_base,pyqt5] ; extra == 'pyinstaller'"", ""PartSeg[accelerate] ; extra == 'pyinstaller_base'"", ""PyInstaller ; extra == 'pyinstaller_base'"", ""pydantic ; extra == 'pyinstaller_base'"", ""PartSeg[pyqt5] ; extra == 'pyqt'"", ""PyQt5 !=5.15.0,>=5.12.3 ; extra == 'pyqt5'"", ""napari[pyqt5] ; extra == 'pyqt5'"", ""PyQt6 ; extra == 'pyqt6'"", 'napari[pyqt6] >=0.5.0 ; (python_version >= ""3.9"") and extra == \'pyqt6\'', ""PartSeg[pyside2] ; extra == 'pyside'"", ""PySide2 !=5.15.0,>=5.12.3 ; extra == 'pyside2'"", ""napari[pyside] ; extra == 'pyside2'"", ""PySide6 ; extra == 'pyside6'"", 'napari[pyside6_experimental] >=0.5.0 ; (python_version >= ""3.9"") and extra == \'pyside6\'', ""coverage ; extra == 'test'"", ""lxml[html_clean] ; extra == 'test'"", ""pytest >=7.0.0 ; extra == 'test'"", ""pytest-qt ; extra == 'test'"", ""pytest-timeout ; extra == 'test'"", ""scikit-image ; extra == 'test'"", ""pytest ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""lxml ; extra == 'testing'""]","# PartSeg +438,PartSeg,0.15.4,2022-04-01,2024-12-24,PartSeg,Grzegorz Bokota,Grzegorz Bokota ,BSD-3-Clause,https://4dnucleome.cent.uw.edu.pl/PartSeg/,"PartSeg is python GUI and set of napari plugins for bio imaging analysis especially nucleus analysis,",>=3.8,"['IPython >=7.7.0', 'PartSegCore-compiled-backend <0.16.0,>=0.13.11', 'PartSegData ==0.10.0', 'QtAwesome !=1.2.0,>=1.0.3', 'QtPy >=1.10.0', 'SimpleITK >=2.0.0', 'appdirs >=1.4.4', 'czifile >=2019.5.22', 'defusedxml >=0.6.0', 'fonticon-fontawesome6 >=6.1.1', 'h5py >=3.3.0', 'imagecodecs >=2020.5.30', 'imageio >=2.5.0', 'ipykernel >=5.2.0', 'local-migrator >=0.1.7', 'magicgui !=0.5.0,>=0.4.0', 'mahotas >=1.4.10', 'napari >=0.4.14', 'nme >=0.1.7', 'oiffile >=2020.1.18', 'openpyxl >=2.5.7', 'packaging >=20.0', 'pandas >=1.1.0', 'psygnal >=0.3.1', 'pydantic <3,>=1.9.1', 'pygments >=2.12.0', 'qtconsole >=4.7.7', 'requests >=2.25.0', 'scipy >=1.4.1', 'sentry-sdk >=2.4.0', 'six >=1.11.0', 'superqt >=0.3.0', 'sympy >=1.1.1', 'tifffile >=2020.9.30', 'traceback-with-variables >=2.0.4', 'vispy >=0.9.4', 'xlrd >=1.1.0', 'xlsxwriter >=2.0.0', 'numpy <2,>=1.18.5 ; python_version < ""3.10""', 'numpy >=1.18.5 ; python_version >= ""3.10""', ""PartSeg[accelerate,pyqt5] ; extra == 'all'"", ""autodoc-pydantic ; extra == 'docs'"", ""sphinx !=3.0.0,!=3.5.0 ; extra == 'docs'"", ""sphinx-autodoc-typehints ; extra == 'docs'"", ""sphinx-qt-documentation ; extra == 'docs'"", ""PartSeg[pyinstaller_base,pyqt5] ; extra == 'pyinstaller'"", ""PartSeg[accelerate] ; extra == 'pyinstaller_base'"", ""PyInstaller ; extra == 'pyinstaller_base'"", ""pydantic ; extra == 'pyinstaller_base'"", ""PartSeg[pyqt5] ; extra == 'pyqt'"", ""PyQt5 !=5.15.0,>=5.12.3 ; extra == 'pyqt5'"", ""napari[pyqt5] ; extra == 'pyqt5'"", ""PyQt6 ; extra == 'pyqt6'"", 'napari[pyqt6] >=0.5.0 ; (python_version >= ""3.9"") and extra == \'pyqt6\'', ""PartSeg[pyside2] ; extra == 'pyside'"", ""PySide2 !=5.15.0,>=5.12.3 ; extra == 'pyside2'"", ""napari[pyside] ; extra == 'pyside2'"", ""PySide6 ; extra == 'pyside6'"", 'napari[pyside6_experimental] >=0.5.0 ; (python_version >= ""3.9"") and extra == \'pyside6\'', ""coverage ; extra == 'test'"", ""lxml[html_clean] ; extra == 'test'"", ""pytest >=7.0.0 ; extra == 'test'"", ""pytest-qt ; extra == 'test'"", ""pytest-timeout ; extra == 'test'"", ""scikit-image ; extra == 'test'"", ""pytest ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""lxml ; extra == 'testing'""]","# PartSeg ![Contributions](https://img.shields.io/badge/Contributions-Welcome-brightgreen.svg) ![Tests](https://github.com/4DNucleome/PartSeg/workflows/Tests/badge.svg?branch=develop) @@ -41501,7 +43219,7 @@ All notable changes to this project will be documented in this file. Begin of changelog ","['Development Status :: 3 - Alpha', 'Framework :: napari', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Programming Language :: Python :: Implementation :: CPython', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Visualization']","['Homepage, https://partseg.github.io/', 'Documentation, https://partseg.readthedocs.io/en/stable/', 'Source Code, https://github.com/4DNucleome/PartSeg', 'User Support, https://github.com/4DNucleome/PartSeg/issues', 'Bug Tracker, https://github.com/4DNucleome/PartSeg/issues']",PartSeg.load_roi_project,PartSeg.write_tiff_image,PartSeg.SearchLabel,,"['*.tgz', '*.tbz2', '*.gz', '*.bz2']","['.tif', '.tiff']","['.tif', '.tiff']",https://pypi.org/project/PartSeg,,https://4dnucleome.cent.uw.edu.pl/PartSeg/ -417,PartSeg-smfish,0.1.3,2022-10-24,2023-06-18,PartSeg-smfish,Grzegorz Bokota,g.bokota@cent.uw.edu.pl,BSD-3-Clause,https://github.com/4DNucleome/PartSeg-smfish,PartSeg and napari plugin for smfish data,>=3.8,"['PartSeg (>=0.13.0)', 'numpy', 'napari', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'""]","# PartSeg-smfish +439,PartSeg-smfish,0.1.3,2022-10-24,2023-06-18,PartSeg-smfish,Grzegorz Bokota,g.bokota@cent.uw.edu.pl,BSD-3-Clause,https://github.com/4DNucleome/PartSeg-smfish,PartSeg and napari plugin for smfish data,>=3.8,"['PartSeg (>=0.13.0)', 'numpy', 'napari', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'""]","# PartSeg-smfish [![License BSD-3](https://img.shields.io/pypi/l/PartSeg-smfish.svg?color=green)](https://github.com/4DNucleome/PartSeg-smfish/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/PartSeg-smfish.svg?color=green)](https://pypi.org/project/PartSeg-smfish) @@ -41569,7 +43287,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/4DNucleome/PartSeg-smfish/issues', 'Documentation, https://github.com/4DNucleome/PartSeg-smfish#README.md', 'Source Code, https://github.com/4DNucleome/PartSeg-smfish', 'User Support, https://github.com/4DNucleome/PartSeg-smfish/issues']",,,PartSeg-smfish.verify_points.verify_segmentation,,,,,https://pypi.org/project/PartSeg-smfish,https://github.com/4DNucleome/PartSeg-smfish, -418,platelet-unet-watershed,0.0.3,2022-02-05,2023-06-18,platelet-unet-watershed,Juan Nunez-Iglesias & Abigail McGovern,juan.nunez-iglesias@monash.edu,BSD-3,https://github.com/jni/platelet-unet-watershed,Segment platelets with pretrained unet and affinity watershed,>=3.7,"['magicgui >=0.2.11', 'napari >=0.4.11', 'napari-plugin-engine >=0.1.4', 'numba >=0.50', 'numpy', 'scikit-image', 'scipy', 'toolz', 'torch', 'torchvision', 'tqdm']","# platelet-unet-watershed +440,platelet-unet-watershed,0.0.3,2022-02-05,2025-01-02,platelet-unet-watershed,Juan Nunez-Iglesias & Abigail McGovern,juan.nunez-iglesias@monash.edu,BSD-3,https://github.com/jni/platelet-unet-watershed,Segment platelets with pretrained unet and affinity watershed,>=3.7,"['magicgui>=0.2.11', 'napari>=0.4.11', 'napari-plugin-engine>=0.1.4', 'numba>=0.50', 'numpy', 'scikit-image', 'scipy', 'toolz', 'torch', 'torchvision', 'tqdm']","# platelet-unet-watershed [![License](https://img.shields.io/pypi/l/platelet-unet-watershed.svg?color=green)](https://github.com/jni/platelet-unet-watershed/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/platelet-unet-watershed.svg?color=green)](https://pypi.org/project/platelet-unet-watershed) @@ -41627,7 +43345,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/jni/platelet-unet-watershed/issues', 'Documentation, https://github.com/jni/platelet-unet-watershed#README.md', 'Source Code, https://github.com/jni/platelet-unet-watershed', 'User Support, https://github.com/jni/platelet-unet-watershed/issues']",,,platelet-unet-watershed.UNetPredictWidget,,,,,https://pypi.org/project/platelet-unet-watershed,https://github.com/jni/platelet-unet-watershed, -419,platetrack,0.0.7,,,platetrack,Abigail S McGovern,abigail_mcgovern@hotmail.com,BSD-3-Clause,,napari plugin for tracking platelets with trackpy,>=3.7,"['napari', 'numpy', 'trackpy', 'pandas', 'plateletanalysis']","# platetrack +441,platetrack,0.0.7,,,platetrack,Abigail S McGovern,abigail_mcgovern@hotmail.com,BSD-3-Clause,,napari plugin for tracking platelets with trackpy,>=3.7,"['napari', 'numpy', 'trackpy', 'pandas', 'plateletanalysis']","# platetrack A small napari plugin for tracking platelets. Platetrack requires a segmentation and an image containing raw data. We recomend trying the napari plugin iterseg to generate these. Platetrack uses trackpy for tracking and outputs a dataframe with platelet coordinates, tracking information, and several other variables, which provide information about each platelet. @@ -41718,7 +43436,7 @@ A number of variables are computed about the platelets alongside the tracking. E **Contributing:** If you want to contribute to platetrack, please fork the repo and if you want to make changes make a pull request with as much detail about the change as possible. Please ensure any changes you want to make don't break the existing functions. ","['Framework :: napari', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License', 'Intended Audience :: Science/Research', 'Topic :: Scientific/Engineering', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/abigailmcgovern/platelet-tracking/issues', 'Documentation, https://github.com/abigailmcgovern/platelet-tracking#README.md', 'Source Code, https://github.com/abigailmcgovern/platelet-tracking', 'User Support, https://github.com/abigailmcgovern/platelet-tracking/issues']",platetrack.load_tracks,,platetrack.track_platelets,,"['*.csv', '*.parquet']",,,https://pypi.org/project/platetrack,, -420,PlatyMatch,0.0.3,2022-02-11,2023-06-18,PlatyMatch,Manan Lalit,lalit@mpi-cbg.de,BSD-3,https://github.com/juglab/PlatyMatch,PlatyMatch allows registration of volumetric images of embryos by establishing correspondences between cells,>=3.6,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'scikit-image', 'scikit-learn', 'tqdm', 'simpleitk', 'napari[all]', 'pandas', 'pytest']","[![DOI:10.1007/978-3-030-66415-2_30](https://zenodo.org/badge/DOI/10.1007/978-3-030-66415-2_30.svg)](https://link.springer.com/chapter/10.1007/978-3-030-66415-2_30) +442,PlatyMatch,0.0.3,2022-02-11,2023-06-18,PlatyMatch,Manan Lalit,lalit@mpi-cbg.de,BSD-3,https://github.com/juglab/PlatyMatch,PlatyMatch allows registration of volumetric images of embryos by establishing correspondences between cells,>=3.6,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'scikit-image', 'scikit-learn', 'tqdm', 'simpleitk', 'napari[all]', 'pandas', 'pytest']","[![DOI:10.1007/978-3-030-66415-2_30](https://zenodo.org/badge/DOI/10.1007/978-3-030-66415-2_30.svg)](https://link.springer.com/chapter/10.1007/978-3-030-66415-2_30) [![License: MIT](https://img.shields.io/badge/License-MIT-blue.svg)](https://opensource.org/licenses/MIT) [![PyPI](https://img.shields.io/pypi/v/PlatyMatch.svg?color=green)](https://pypi.org/project/PlatyMatch) [![Python Version](https://img.shields.io/pypi/pyversions/PlatyMatch.svg?color=green)](https://python.org) @@ -41878,7 +43596,7 @@ isbn=""978-3-030-66415-2"" ","['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']",,,,PlatyMatch.DetectNuclei,,,,,https://pypi.org/project/PlatyMatch,https://github.com/juglab/PlatyMatch, -421,POPIDD IO,0.0.1,,,popidd-io,Ferran Cardoso Rodriguez,ferran.cardoso@icr.ac.uk," +443,POPIDD IO,0.0.1,,,popidd-io,Ferran Cardoso Rodriguez,ferran.cardoso@icr.ac.uk," GNU GENERAL PUBLIC LICENSE Version 3, 29 June 2007 @@ -42640,7 +44358,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']",,popidd-io.get_image_reader,,popidd-io.wLoadImage,,"['*.tiff', '*.tif', '*.svs', '*.ndpi', '*.qptiff']",,,https://pypi.org/project/popidd-io,, -422,PoseR,0.0.1b3,,,PoseR-napari,Pierce Mullen,pnm1@st-andrews.ac.uk,BSD-3-Clause,,A deep learning toolbox for decoding animal behaviour,>=3.10,"['numpy', 'magicgui', 'qtpy', 'napari', 'napari-video', 'napari-plot', 'tables', 'imageio-ffmpeg (==0.4.8)', 'pytorch-lightning', 'test-tube', 'scikit-learn', 'matplotlib', 'numba', 'networkx', 'seaborn', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# PoseR +444,PoseR,0.0.1b4,,,PoseR-napari,Pierce Mullen,pnm1@st-andrews.ac.uk,BSD-3-Clause,,A deep learning toolbox for decoding animal behaviour,>=3.10,"['napari[all]==0.4.14', 'npe2==0.6.2', 'pydantic==1.10.4', 'numpy==1.23.5', 'magicgui', 'qtpy', 'napari-video', 'napari-plot==0.1.5', 'tables', 'imageio-ffmpeg==0.4.8', 'pytorch-lightning', 'test-tube', 'scikit-learn', 'matplotlib', 'numba', 'networkx', 'seaborn', 'ultralytics', 'torcheval==0.0.7', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# PoseR [![License BSD-3](https://img.shields.io/pypi/l/PoseR.svg?color=green)](https://github.com/pnm4sfix/PoseR/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/PoseR-napari.svg?color=green)](https://pypi.org/project/PoseR-napari) @@ -42686,10 +44404,11 @@ For GPU: For CPU only version: conda install pytorch torchvision torchaudio cpuonly -c pytorch - + Install napari: - pip install napari[""all""] + pip install napari[all]==0.4.14 npe2==0.6.2 pydantic==1.10.4 + You can install `PoseR` via [pip]: @@ -42702,6 +44421,10 @@ To install latest development version : pip install git+https://github.com/pnm4sfix/PoseR.git +## Quick start + +https://github.com/pnm4sfix/PoseR/blob/generalise-species/docs/QuickStart.md + ## Contributing Contributions are very welcome. Tests can be run with [tox], please ensure @@ -42734,7 +44457,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/pnm4sfix/PoseR/issues', 'Documentation, https://github.com/pnm4sfix/PoseR#README.md', 'Source Code, https://github.com/pnm4sfix/PoseR', 'User Support, https://github.com/pnm4sfix/PoseR/issues']",,,PoseR-napari.make_qwidget,,,,,https://pypi.org/project/PoseR-napari,, -423,psfmodels,0.3.3,2022-07-07,2023-10-07,psfmodels,Talley Lambert,talley.lambert@gmail.com,GPL-3.0,https://github.com/tlambert03/psfmodels,Scalar and vectorial models of the microscope point spread function (PSF).,>=3.7,"['numpy', 'scipy (>=0.14.0)', 'typing-extensions', ""black ; extra == 'dev'"", ""flake8 ; extra == 'dev'"", ""flake8-docstrings ; extra == 'dev'"", ""flake8-typing-imports ; extra == 'dev'"", ""ipython ; extra == 'dev'"", ""isort ; extra == 'dev'"", ""mypy ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""pydocstyle ; extra == 'dev'"", ""pytest ; extra == 'dev'"", ""pytest-cov ; extra == 'dev'"", ""tox ; extra == 'dev'"", ""tox-conda ; extra == 'dev'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""jax ; extra == 'testing'"", 'magicgui ; (platform_system != ""Linux"") and extra == \'testing\'', 'qtpy ; (platform_system != ""Linux"") and extra == \'testing\'', 'pyside2 ; (platform_system != ""Linux"" and python_version < ""3.11"") and extra == \'testing\'']","# psfmodels +445,psfmodels,0.3.3,2022-07-07,2024-11-21,psfmodels,Talley Lambert,talley.lambert@gmail.com,GPL-3.0,https://github.com/tlambert03/psfmodels,Scalar and vectorial models of the microscope point spread function (PSF).,>=3.7,"['numpy', 'scipy (>=0.14.0)', 'typing-extensions', ""black ; extra == 'dev'"", ""flake8 ; extra == 'dev'"", ""flake8-docstrings ; extra == 'dev'"", ""flake8-typing-imports ; extra == 'dev'"", ""ipython ; extra == 'dev'"", ""isort ; extra == 'dev'"", ""mypy ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""pydocstyle ; extra == 'dev'"", ""pytest ; extra == 'dev'"", ""pytest-cov ; extra == 'dev'"", ""tox ; extra == 'dev'"", ""tox-conda ; extra == 'dev'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""jax ; extra == 'testing'"", 'magicgui ; (platform_system != ""Linux"") and extra == \'testing\'', 'qtpy ; (platform_system != ""Linux"") and extra == \'testing\'', 'pyside2 ; (platform_system != ""Linux"" and python_version < ""3.11"") and extra == \'testing\'']","# psfmodels [![PyPI](https://img.shields.io/pypi/v/psfmodels.svg?color=green)](https://pypi.org/project/psfmodels) [![Python @@ -42876,7 +44599,7 @@ microscope (currently, only strictly orthogonal illumination and detection are supported). See the [lightsheet.ipynb](notebooks/lightsheet.ipynb) Jupyter notebook for examples. ","['Development Status :: 3 - Alpha', 'Framework :: napari', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)', 'Natural Language :: English', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10']","['Source Code, https://github.com/tlambert03/psfmodels']",,,psfmodels.make_psf,,,,,https://pypi.org/project/psfmodels,https://github.com/tlambert03/psfmodels, -424,PSSR2,2.1.0.post1,,,pssr,Hayden Stites,,MIT,,Point-Scanning Super-Resolution 2,">=3.9,<4.0","['czifile (>=2019.7.2,<2020.0.0)', 'napari (>=0.4.13,<0.5.0) ; extra == ""napari""', 'numpy (>=1.22.4,<2.0.0)', 'pillow (>=9.1.0)', 'psutil (>=5.0.0)', 'pytorch-msssim (>=1.0.0,<2.0.0)', 'scikit-image (>=0.18.0)', 'scikit-optimize (>=0.9.0)', 'tifffile (>=2019.7.26)', 'timm (>=0.8.0)', 'torch (>=1.11.0)', 'tqdm (>=4.0.0,<5.0.0)']","# Point-Scanning Super-Resolution 2 (**PSSR2**) +446,PSSR2,2.1.1,,,pssr,Hayden Stites,,MIT,,Point-Scanning Super-Resolution 2,">=3.9,<4.0","['czifile (>=2019.7.2,<2020.0.0)', 'napari (>=0.4.13,<0.5.0) ; extra == ""napari""', 'numpy (>=1.22.4,<2.0.0)', 'pillow (>=9.1.0)', 'psutil (>=5.0.0)', 'pytorch-msssim (>=1.0.0,<2.0.0)', 'scikit-image (>=0.18.0)', 'scikit-optimize (>=0.9.0)', 'tifffile (>=2019.7.26)', 'timm (>=0.8.0)', 'torch (>=1.11.0)', 'tqdm (>=4.0.0,<5.0.0)']","# Point-Scanning Super-Resolution 2 (**PSSR2**) **PSSR2** is a user-friendly [PyTorch](https://pytorch.org)-based workflow for super-resolution tasks using microscopy images. This is the official reimplementation and extention of the methods described in the original paper: [Deep learning-based point-scanning super-resolution imaging](https://www.nature.com/articles/s41592-021-01080-z). @@ -42894,7 +44617,7 @@ If you experience any bugs, unexpected behaviors, or have any suggestions, make Sample data and pretrained models can currently be found [here](https://drive.google.com/drive/folders/1q6a2Z6gRG3Vnx8BM3OW7Y35myw-0f0_H). ","['Development Status :: 5 - Production/Stable', 'Environment :: GPU :: NVIDIA CUDA', 'Framework :: napari', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Documentation :: Sphinx', 'Topic :: Scientific/Engineering :: Artificial Intelligence', 'Topic :: Scientific/Engineering :: Image Processing']","['Documentation, https://ucsdmanorlab.github.io/PSSR2', 'Repository, https://github.com/ucsdmanorlab/PSSR2']",,,pssr.napari.train,,,,,https://pypi.org/project/pssr,, -425,pyCUDAdecon,0.5.1,2021-05-31,2024-08-19,pycudadecon,Talley Lambert,Talley Lambert ,MIT,https://github.com/tlambert03/pycudadecon,Python wrapper for CUDA-accelerated 3D deconvolution,>=3.8,"['numpy', 'tifffile', 'typing-extensions', ""ipython; extra == 'dev'"", ""mypy; extra == 'dev'"", ""pdbpp; extra == 'dev'"", ""pre-commit; extra == 'dev'"", ""rich; extra == 'dev'"", ""ruff; extra == 'dev'"", ""furo==2022.9.29; extra == 'docs'"", ""ghp-import==2.1.0; extra == 'docs'"", ""jupyter-book==0.13.1; extra == 'docs'"", ""sphinx-autodoc-typehints==1.19.1; extra == 'docs'"", ""pytest-cov; extra == 'test'"", ""pytest>=6.0; extra == 'test'""]","# pyCUDAdecon +447,pyCUDAdecon,0.5.1,2021-05-31,2024-08-19,pycudadecon,Talley Lambert,Talley Lambert ,MIT,https://github.com/tlambert03/pycudadecon,Python wrapper for CUDA-accelerated 3D deconvolution,>=3.8,"['numpy', 'tifffile', 'typing-extensions', ""ipython; extra == 'dev'"", ""mypy; extra == 'dev'"", ""pdbpp; extra == 'dev'"", ""pre-commit; extra == 'dev'"", ""rich; extra == 'dev'"", ""ruff; extra == 'dev'"", ""furo==2022.9.29; extra == 'docs'"", ""ghp-import==2.1.0; extra == 'docs'"", ""jupyter-book==0.13.1; extra == 'docs'"", ""sphinx-autodoc-typehints==1.19.1; extra == 'docs'"", ""pytest-cov; extra == 'test'"", ""pytest>=6.0; extra == 'test'""]","# pyCUDAdecon This package provides a python wrapper and convenience functions for [cudaDecon](https://github.com/scopetools/cudaDecon), which is a CUDA/C++ @@ -43013,7 +44736,91 @@ ___ 1 D.S.C. Biggs and M. Andrews, Acceleration of iterative image restoration algorithms, Applied Optics, Vol. 36, No. 8, 1997. https://doi.org/10.1364/AO.36.001766 ","['Development Status :: 4 - Beta', 'Environment :: GPU :: NVIDIA CUDA', 'Framework :: napari', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: MIT License', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering']","['Documentation, https://tlambert03.github.io/pycudadecon/', 'Source, https://github.com/tlambert03/pycudadecon', 'Tracker, https://github.com/tlambert03/pycudadecon/issues']",,,pycudadecon.deconvolve,,,,,https://pypi.org/project/pycudadecon,https://github.com/tlambert03/pycudadecon, -426,recOrder-napari,0.4.1,2022-07-11,2023-11-07,recOrder-napari,"Computational Microscopy Platform, CZ Biohub",shalin.mehta@czbiohub.org,BSD 3-Clause,https://github.com/mehta-lab/recOrder,Computational microscopy toolkit for label-free imaging,>=3.9,"['waveorder ==2.0.0rc3', 'pycromanager ==0.27.2', 'click >=8.0.1', 'natsort >=7.1.1', 'colorspacious >=1.1.2', 'pyqtgraph >=0.12.3', 'napari-ome-zarr >=0.3.2', 'napari[pyqt6_experimental]', 'importlib-metadata', 'iohub ==0.1.0.dev5', 'wget >=3.2', ""pytest >=5.0.0 ; extra == 'dev'"", ""pytest-cov ; extra == 'dev'"", ""pytest-qt ; extra == 'dev'"", ""tox ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""black ; extra == 'dev'"", ""hypothesis ; extra == 'dev'""]","# recOrder +448,qhyccd-capture,0.0.3.6,,,qhyccd-capture,QHYCCD,lq@qhyccd.com," +Copyright (c) 2024, +All rights reserved. + +Redistribution and use in source and binary forms, with or without +modification, are permitted provided that the following conditions are met: + +* Redistributions of source code must retain the above copyright notice, this + list of conditions and the following disclaimer. + +* Redistributions in binary form must reproduce the above copyright notice, + this list of conditions and the following disclaimer in the documentation + and/or other materials provided with the distribution. + +* Neither the name of copyright holder nor the names of its + contributors may be used to endorse or promote products derived from + this software without specific prior written permission. + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ""AS IS"" +AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE +IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE +DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE +FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL +DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR +SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER +CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, +OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE +OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. +",,The basic operations for QHYCCD series cameras,>=3.9,"['numpy', 'magicgui', 'qtpy', 'scikit-image', 'opencv-python', 'PyQt5', 'matplotlib', 'astropy', 'psutil', 'qtrangeslider', 'photutils<1.14.0,>=1.11.0', 'pybind11', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""']","# qhyccd-capture + +## Project Introduction + +`qhyccd-capture` is a basic operation library for handling QHYCCD series cameras. This library provides functionalities to interact with QHYCCD cameras, including camera connection, parameter setting, image capture, and display. This project is a [napari] plugin, aimed at simplifying the use of the camera through a graphical user interface. + +## Features + +- **Camera Connection**: Supports loading the corresponding QHYCCD dynamic link libraries on different operating systems (such as Windows, Linux, macOS) and initializing camera resources. +- **Parameter Setting**: Provides the functionality to set camera parameters, such as exposure time, gain, offset, USB bandwidth, etc. +- **Image Capture**: Supports single-frame mode exposure and retrieves image data. +- **Image Display**: Displays captured images through napari, supports distributed display, single display, and sequence display modes. +- **Histogram and White Balance**: Provides histogram equalization and white balance adjustment functions. +- **ROI (Region of Interest)**: Supports creating and applying ROIs to operate on specific areas. +- **Video Recording**: Supports video recording and saves in various video formats. +- **Temperature Control**: Supports temperature control and displays temperature. +- **CFW Control**: Supports CFW control and displays CFW status. +- **Star Point Resolution**: Supports star point resolution and displays the results. + +![qhyccd-capture 插件界面显示](https://raw.githubusercontent.com/LiuQiang-AI/qhyccd-capture/main/src/qhyccd_capture/images/image.png) + +## Installation +You can install via pip: + + pip install qhyccd-capture + +To install the latest development version: + + pip install git+https://github.com/nightliar-L/qhyccd-capture.git + +## Dependency Installation +#### Astrometry.net +Currently, astrometry.net only supports the Ubuntu system. + + sudo apt-get install astrometry.net + sudo apt-get install astrometry-data-tycho2 + sudo vim ~/.bashrc + # Add the following content + export PATH=$PATH:/usr/local/astrometry/bin + +## Version Changes + +- 2024-10-23 Version 0.0.1 Initial version +- 2024-10-24 Version 0.0.2 Fixed some issues introduced by the release +- 2024-10-24 Version 0.0.3 Version changes include modified descriptions and initial configurations + +## Contributing + +Contributions are very welcome. Tests can be run with [tox], please ensure +the coverage at least stays the same before you submit a pull request. + +## License + +Distributed under the terms of the [BSD-3] license, +""qhyccd-capture"" is free and open source software +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']",,qhyccd-capture.read_raw_image,,qhyccd-capture.qhyccd_capture,,['*.raw'],,,https://pypi.org/project/qhyccd-capture,, +449,recOrder-napari,0.4.1,2022-07-11,2023-11-07,recOrder-napari,"Computational Microscopy Platform, CZ Biohub",shalin.mehta@czbiohub.org,BSD 3-Clause,https://github.com/mehta-lab/recOrder,Computational microscopy toolkit for label-free imaging,>=3.9,"['waveorder ==2.0.0rc3', 'pycromanager ==0.27.2', 'click >=8.0.1', 'natsort >=7.1.1', 'colorspacious >=1.1.2', 'pyqtgraph >=0.12.3', 'napari-ome-zarr >=0.3.2', 'napari[pyqt6_experimental]', 'importlib-metadata', 'iohub ==0.1.0.dev5', 'wget >=3.2', ""pytest >=5.0.0 ; extra == 'dev'"", ""pytest-cov ; extra == 'dev'"", ""pytest-qt ; extra == 'dev'"", ""tox ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""black ; extra == 'dev'"", ""hypothesis ; extra == 'dev'""]","# recOrder ![PyPI - Python Version](https://img.shields.io/pypi/pyversions/recOrder-napari) [![Python package index download statistics](https://img.shields.io/pypi/dm/recOrder-napari.svg)](https://pypistats.org/packages/recOrder-napari) [![Python package index](https://img.shields.io/pypi/v/recOrder-napari.svg)](https://pypi.org/project/recOrder-napari) @@ -43079,7 +44886,7 @@ on a microscope, see the [microscope installation guide](https://github.com/meht [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.5178487.svg)](https://doi.org/10.5281/zenodo.5178487) [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.5135889.svg)](https://doi.org/10.5281/zenodo.5135889) ","['License :: OSI Approved :: BSD License', 'Programming Language :: Python', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering', 'Topic :: Scientific/Engineering :: Visualization', 'Topic :: Scientific/Engineering :: Information Analysis', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Topic :: Utilities', 'Framework :: napari', 'Operating System :: Microsoft :: Windows', 'Operating System :: POSIX', 'Operating System :: Unix', 'Operating System :: MacOS']","['Bug Tracker, https://github.com/mehta-lab/recOrder/issues', 'Documentation, https://github.com/mehta-lab/recOrder/wiki', 'Source Code, https://github.com/mehta-lab/recOrder/tree/main/recOrder', 'User Support, https://github.com/mehta-lab/recOrder/issues']",recOrder-napari.get_reader,,recOrder-napari.MainWidget,recOrder-napari.polarization_target_data,"['*.zarr', '*.tif']",,,https://pypi.org/project/recOrder-napari,https://github.com/mehta-lab/recOrder, -427,RedLionfish,0.10,2021-11-24,2024-03-22,RedLionfish,Luis Perdigao,luis.perdigao@rfi.ac.uk,"Apache License, Version 2.0",https://github.com/rosalindfranklininstitute/RedLionfish,Fast Richardson-Lucy deconvolution of 3D volume data using GPU or CPU with napari plugin.,,"['numpy', 'scipy', 'pyopencl', 'reikna']","![RedLionfish Logo](./redlionfish_logo.svg) +450,RedLionfish,0.10,2021-11-24,2024-03-22,RedLionfish,Luis Perdigao,luis.perdigao@rfi.ac.uk,"Apache License, Version 2.0",https://github.com/rosalindfranklininstitute/RedLionfish,Fast Richardson-Lucy deconvolution of 3D volume data using GPU or CPU with napari plugin.,,"['numpy', 'scipy', 'pyopencl', 'reikna']","![RedLionfish Logo](./redlionfish_logo.svg) # RedLionfish (RL) deconvolution @@ -43305,7 +45112,69 @@ It will take a while to complete. Report issues and questions in project's github page, please. Please don't try to send emails as they may be igored or spam-filtered. ","['Development Status :: 4 - Beta ', 'License :: OSI Approved :: Apache Software License', 'Natural Language :: English', 'Programming Language :: Python :: 3.8', 'Operating System :: Microsoft :: Windows', 'Operating System :: MacOS', 'Operating System :: POSIX :: Linux', 'Topic :: Scientific/Engineering :: Image Processing', 'Framework :: napari']",,,,RedLionfish.RedLionfish_widget,,,,,https://pypi.org/project/RedLionfish,https://github.com/rosalindfranklininstitute/RedLionfish, -428,Calibration Tool,0.0.1,2023-11-18,2023-11-18,set-calibration,Clement H. Benedetti,clement.benedetti@mri.cnrs.fr,MIT,https://pypi.org/project/set-calibration,"""A tool allowing to modify the calibration (physical units) of images""",>=3.8,"['numpy', 'magicgui', 'qtpy', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# set-calibration +451,Embryo Segmentation,0.3,,,segment-embryo,Volker Baecker,volker.baecker@mri.cnrs.fr,MIT,,"3D Segment ascidian embryos using cellpose. The images are first rescaled to be isotropic and then downscaled, before cellpose is used. The resulting labels are upscaled to match the original data.",>=3.9,"['numpy', 'magicgui', 'qtpy', 'scikit-image', 'cellpose', 'czifile', 'napari-czifile2', 'set-calibration', 'big-fish', 'napari-bigfish', 'scikit-image', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""', 'numpy; extra == ""testing""']","# segment-embryo + +[![License MIT](https://img.shields.io/pypi/l/segment-embryo.svg?color=green)](https://github.com/MontpellierRessourcesImagerie/segment-embryo/raw/main/LICENSE) +[![PyPI](https://img.shields.io/pypi/v/segment-embryo.svg?color=green)](https://pypi.org/project/segment-embryo) +[![Python Version](https://img.shields.io/pypi/pyversions/segment-embryo.svg?color=green)](https://python.org) +[![tests](https://github.com/MontpellierRessourcesImagerie/segment-embryo/workflows/tests/badge.svg)](https://github.com/MontpellierRessourcesImagerie/segment-embryo/actions) +[![codecov](https://codecov.io/gh/MontpellierRessourcesImagerie/segment-embryo/branch/main/graph/badge.svg)](https://codecov.io/gh/MontpellierRessourcesImagerie/segment-embryo) +[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/segment-embryo)](https://napari-hub.org/plugins/segment-embryo) + +3D Segment ascidian embryos using cellpose. The images are first rescaled to be isotropic and then downscaled, before cellpose is used. The resulting labels are upscaled to match the original data. + +---------------------------------- + +This [napari] plugin was generated with [copier] using the [napari-plugin-template]. + + + +## Installation + +You can install `segment-embryo` via [pip]: + + pip install segment-embryo + + + + +## Contributing + +Contributions are very welcome. Tests can be run with [tox], please ensure +the coverage at least stays the same before you submit a pull request. + +## License + +Distributed under the terms of the [MIT] license, +""segment-embryo"" is free and open source software + +## Issues + +If you encounter any problems, please [file an issue] along with a detailed description. + +[napari]: https://github.com/napari/napari +[copier]: https://copier.readthedocs.io/en/stable/ +[@napari]: https://github.com/napari +[MIT]: http://opensource.org/licenses/MIT +[BSD-3]: http://opensource.org/licenses/BSD-3-Clause +[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt +[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt +[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0 +[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt +[napari-plugin-template]: https://github.com/napari/napari-plugin-template + +[napari]: https://github.com/napari/napari +[tox]: https://tox.readthedocs.io/en/latest/ +[pip]: https://pypi.org/project/pip/ +[PyPI]: https://pypi.org/ +","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Topic :: Scientific/Engineering :: Image Processing']","['Homepage, https://github.com/MontpellierRessourcesImagerie/segment-embryo', 'Documentation, https://github.com/MontpellierRessourcesImagerie/segment-embryo#segment-embryo', 'Repository, https://github.com/MontpellierRessourcesImagerie/segment-embryo.git', 'Issues, https://github.com/MontpellierRessourcesImagerie/segment-embryo/issues', 'Changelog, https://github.com/MontpellierRessourcesImagerie/segment-embryo/releases']",,,segment-embryo.make_qwidget,segment-embryo.make_sample_data,,,,https://pypi.org/project/segment-embryo,, +452,Calibration Tool,0.0.1,2023-11-18,2023-11-18,set-calibration,Clement H. Benedetti,clement.benedetti@mri.cnrs.fr,MIT,https://pypi.org/project/set-calibration,"""A tool allowing to modify the calibration (physical units) of images""",>=3.8,"['numpy', 'magicgui', 'qtpy', 'scikit-image', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# set-calibration [![License MIT](https://img.shields.io/pypi/l/set-calibration.svg?color=green)](https://github.com/MontpellierRessourcesImagerie/set-calibration/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/set-calibration.svg?color=green)](https://pypi.org/project/set-calibration) @@ -43373,15 +45242,15 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/MontpellierRessourcesImagerie/set-calibration/issues', 'Documentation, https://github.com/MontpellierRessourcesImagerie/set-calibration#README.md', 'Source Code, https://github.com/MontpellierRessourcesImagerie/set-calibration', 'User Support, https://github.com/MontpellierRessourcesImagerie/set-calibration/issues']",,,set-calibration.create_scale_panel,,,,,https://pypi.org/project/set-calibration,, -429,skan,0.11.1,2021-05-03,2023-06-23,skan,Juan Nunez-Iglesias,juan.nunez-iglesias@monash.edu,BSD 3-Clause,http://github.com/jni/skan,Skeleton analysis in Python,>=3.8,"['imageio (>=2.10.1)', 'matplotlib (>=3.4)', 'networkx (>=2.7)', 'numba (>=0.53)', 'numpy (>=1.21)', 'pandas (>=2.0.2)', 'openpyxl (>=2.6)', 'scikit-image (>=0.17.1)', 'scipy (>=1.7)', 'toolz (>=0.10.0)', 'tqdm (>=4.57.0)', ""scikit-image[data] ; extra == 'all'"", ""napari[all] (<0.4.18) ; extra == 'docs'"", ""sphinx ; extra == 'docs'"", ""jupyter ; extra == 'docs'"", ""notebook ; extra == 'docs'"", ""seaborn (<1.0) ; extra == 'docs'"", ""sphinx-toggleprompt ; extra == 'docs'"", ""sphinx-copybutton ; extra == 'docs'"", ""sphinxcontrib-bibtex ; extra == 'docs'"", ""myst-nb ; extra == 'docs'"", ""zarr ; extra == 'docs'"", ""pydata-sphinx-theme (==0.8.1) ; extra == 'docs'"", ""coverage ; extra == 'testing'"", ""hypothesis ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""seaborn (<1.0) ; extra == 'testing'"", ""tifffile ; extra == 'testing'""]","# skan: skeleton analysis in Python +453,skan,0.12.1,2021-05-03,2024-11-25,skan,Juan Nunez-Iglesias,Juan Nunez-Iglesias ,BSD 3-Clause,http://github.com/jni/skan,Skeleton analysis in Python,>=3.9,"['imageio>=2.10.1', 'magicgui>=0.7.3', 'matplotlib>=3.4', 'networkx>=2.7', 'numba>=0.53', 'numpy>=1.25', 'pandas>=2.0.2', 'openpyxl>=2.6', 'scikit-image>=0.17.1', 'scipy>=1.7', 'toolz>=0.10.0', 'tqdm>=4.57.0', 'scikit-image[data]; extra == ""all""', 'coverage; extra == ""testing""', 'hypothesis; extra == ""testing""', 'napari[pyqt5]>=0.4.19rc1; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'seaborn<1.0; extra == ""testing""', 'tifffile; extra == ""testing""', 'napari[all]>=0.4.19rc1; extra == ""docs""', 'sphinx; extra == ""docs""', 'jupyter; extra == ""docs""', 'notebook; extra == ""docs""', 'seaborn<1.0,>=0.13; extra == ""docs""', 'sphinx-toggleprompt; extra == ""docs""', 'sphinx-copybutton; extra == ""docs""', 'sphinxcontrib-bibtex; extra == ""docs""', 'myst-nb; extra == ""docs""', 'zarr; extra == ""docs""', 'pydata-sphinx-theme<1.0; extra == ""docs""']","# skan: skeleton analysis in Python Python module to analyse skeleton (thin object) images [![Binder](https://mybinder.org/badge.svg)](https://mybinder.org/v2/gh/jni/skan/main?filepath=doc%2Fgetting_started.ipynb) [![Coverage Status](https://coveralls.io/repos/github/jni/skan/badge.svg?branch=main)](https://coveralls.io/github/jni/skan?branch=master) See the documentation at [https://skeleton-analysis.org](https://skeleton-analysis.org). -","['Development Status :: 3 - Alpha', 'Environment :: Console', 'Intended Audience :: Developers', 'Intended Audience :: Education', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: BSD License', 'Programming Language :: Python', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering', 'Operating System :: Microsoft :: Windows', 'Operating System :: POSIX', 'Operating System :: Unix', 'Operating System :: MacOS', 'Framework :: napari']",,,,skan.skeletonize_labels,,,,,https://pypi.org/project/skan,http://github.com/jni/skan, -430,smo,2.0.2,2022-01-28,2023-06-18,smo,Mauro Silberberg,maurosilber@gmail.com,MIT,https://github.com/maurosilber/smo,Implementation of the Silver Mountain Operator (SMO) for the estimation of background distributions.,,"['numpy', 'scipy', 'typing-extensions ; python_version < ""3.9""', ""pre-commit ; extra == 'dev'"", ""pytest ; extra == 'dev'"", ""tox ; extra == 'dev'""]","![PyPi](https://img.shields.io/pypi/pyversions/smo.svg) +","['Development Status :: 3 - Alpha', 'Environment :: Console', 'Intended Audience :: Developers', 'Intended Audience :: Education', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: BSD License', 'Programming Language :: Python', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering', 'Operating System :: Microsoft :: Windows', 'Operating System :: POSIX', 'Operating System :: Unix', 'Operating System :: MacOS', 'Framework :: napari']","['Source, https://github.com/jni/skan', 'Bug_Tracker, https://github.com/jni//issues', 'Documentation, https://skeleton-analysis.org/stable/']",,,skan.skeletonize,,,,,https://pypi.org/project/skan,http://github.com/jni/skan, +454,smo,2.0.2,2022-01-28,2023-06-18,smo,Mauro Silberberg,maurosilber@gmail.com,MIT,https://github.com/maurosilber/smo,Implementation of the Silver Mountain Operator (SMO) for the estimation of background distributions.,,"['numpy', 'scipy', 'typing-extensions ; python_version < ""3.9""', ""pre-commit ; extra == 'dev'"", ""pytest ; extra == 'dev'"", ""tox ; extra == 'dev'""]","![PyPi](https://img.shields.io/pypi/pyversions/smo.svg) [![License](https://img.shields.io/github/license/maurosilber/smo)](https://opensource.org/licenses/MIT) [![PyPi](https://img.shields.io/pypi/v/smo.svg)](https://pypi.python.org/pypi/smo) [![Conda](https://img.shields.io/conda/pn/conda-forge/smo)](https://anaconda.org/conda-forge/smo) @@ -43488,7 +45357,7 @@ pip install -e .[dev] pre-commit install ``` ","['Intended Audience :: Science/Research', 'License :: OSI Approved :: MIT License', 'Operating System :: MacOS :: MacOS X', 'Operating System :: Microsoft :: Windows', 'Operating System :: POSIX', 'Programming Language :: Python', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Topic :: Scientific/Engineering', 'Framework :: napari']",,,,smo.napari_experimental_provide_function,,,,,https://pypi.org/project/smo,https://github.com/maurosilber/smo, -431,Snouty Viewer,0.2.5,2023-04-13,2023-06-18,snouty-viewer,Austin E. Y. T. Lefebvre,austin.e.lefebvre@gmail.com,MIT,https://github.com/aelefebv/snouty-viewer,"A plugin to visualize, deskew, and combine Snouty data.",>=3.8,"['magicgui', 'napari', 'numpy', 'ome-types', 'tifffile', ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]","# snouty-viewer +455,Snouty Viewer,0.2.5,2023-04-13,2023-06-18,snouty-viewer,Austin E. Y. T. Lefebvre,austin.e.lefebvre@gmail.com,MIT,https://github.com/aelefebv/snouty-viewer,"A plugin to visualize, deskew, and combine Snouty data.",>=3.8,"['magicgui', 'napari', 'numpy', 'ome-types', 'tifffile', ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]","# snouty-viewer [![License MIT](https://img.shields.io/pypi/l/snouty-viewer.svg?color=green)](https://github.com/aelefebv/snouty-viewer/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/snouty-viewer.svg?color=green)](https://pypi.org/project/snouty-viewer) @@ -43610,7 +45479,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/aelefebv/snouty-viewer/issues', 'Documentation, https://github.com/aelefebv/snouty-viewer#README.md', 'Source Code, https://github.com/aelefebv/snouty-viewer', 'User Support, https://github.com/aelefebv/snouty-viewer/issues']",snouty-viewer.get_reader,snouty-viewer.write_single_image,snouty-viewer.get_native_view,,,['.ome.tif'],,https://pypi.org/project/snouty-viewer,https://github.com/aelefebv/snouty-viewer, -432,spots in yeasts,1.2.0,2023-12-04,2023-12-04,spots-in-yeasts,Clément H. Benedetti,clement.benedetti@mri.cnrs.fr,MIT,https://pypi.org/project/spots-in-yeasts/,A Napari plugin segmenting yeast cells and fluo spots to extract statistics.,>=3.8,"['numpy', 'magicgui', 'magic-class', 'qtpy', 'opencv-python', 'matplotlib', 'termcolor', 'scikit-image', 'tifffile', 'cellpose', 'napari', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# spots-in-yeasts +456,spots in yeasts,1.2.0,2023-12-04,2023-12-04,spots-in-yeasts,Clément H. Benedetti,clement.benedetti@mri.cnrs.fr,MIT,https://pypi.org/project/spots-in-yeasts/,A Napari plugin segmenting yeast cells and fluo spots to extract statistics.,>=3.8,"['numpy', 'magicgui', 'magic-class', 'qtpy', 'opencv-python', 'matplotlib', 'termcolor', 'scikit-image', 'tifffile', 'cellpose', 'napari', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# spots-in-yeasts [![License: MIT](https://img.shields.io/badge/License-MIT-green.svg)](https://github.com/MontpellierRessourcesImagerie/spots-in-yeasts/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/spots-in-yeasts.svg?color=green)](https://pypi.org/project/spots-in-yeasts) @@ -43755,7 +45624,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/MontpellierRessourcesImagerie/spots-in-yeasts/issues', 'Documentation, https://github.com/MontpellierRessourcesImagerie/spots-in-yeasts#README.md', 'Source Code, https://github.com/MontpellierRessourcesImagerie/spots-in-yeasts', 'User Support, https://github.com/MontpellierRessourcesImagerie/spots-in-yeasts/issues']",spots-in-yeasts.get_reader,,spots-in-yeasts.spots_in_yeasts,,['*.ysc'],,,https://pypi.org/project/spots-in-yeasts/,, -433,stardist-napari,2024.8.6.1,2022-06-08,2024-08-23,stardist-napari,"Uwe Schmidt, Martin Weigert","research@uweschmidt.org, martin.weigert@epfl.ch",BSD 3-Clause,https://github.com/stardist/stardist-napari,Object Detection with Star-convex Shapes,>=3.8,"['stardist>=0.8.3', 'napari>=0.4.13', 'magicgui>=0.4.0', 'tensorflow; platform_system != ""Darwin"" or platform_machine != ""arm64""', 'tensorflow-macos; platform_system == ""Darwin"" and platform_machine == ""arm64""', 'tensorflow-metal; platform_system == ""Darwin"" and platform_machine == ""arm64""', 'pytest; extra == ""test""', 'pytest-qt; extra == ""test""', 'napari[pyqt]>=0.4.13; extra == ""test""']","# StarDist Napari Plugin +457,stardist-napari,2024.8.6.1,2022-06-08,2024-08-23,stardist-napari,"Uwe Schmidt, Martin Weigert","research@uweschmidt.org, martin.weigert@epfl.ch",BSD 3-Clause,https://github.com/stardist/stardist-napari,Object Detection with Star-convex Shapes,>=3.8,"['stardist>=0.8.3', 'napari>=0.4.13', 'magicgui>=0.4.0', 'tensorflow; platform_system != ""Darwin"" or platform_machine != ""arm64""', 'tensorflow-macos; platform_system == ""Darwin"" and platform_machine == ""arm64""', 'tensorflow-metal; platform_system == ""Darwin"" and platform_machine == ""arm64""', 'pytest; extra == ""test""', 'pytest-qt; extra == ""test""', 'napari[pyqt]>=0.4.13; extra == ""test""']","# StarDist Napari Plugin [![PyPI version](https://img.shields.io/pypi/v/stardist-napari.svg)](https://pypi.org/project/stardist-napari) [![Anaconda-Server Badge](https://anaconda.org/conda-forge/stardist-napari/badges/version.svg)](https://anaconda.org/conda-forge/stardist-napari) @@ -43871,7 +45740,7 @@ A demonstration of an earlier version of the plugin is shown in [this video](htt Many of the parameters are identical to those of our [StarDist ImageJ/Fiji plugin](https://github.com/stardist/stardist-imagej), which are documented [here](https://imagej.net/plugins/stardist#usage). ","['Development Status :: 4 - Beta', 'Intended Audience :: Science/Research', 'Topic :: Scientific/Engineering', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Framework :: napari']","['Source Code, https://github.com/stardist/stardist-napari', 'Documentation, https://github.com/stardist/stardist-napari', 'Bug Tracker, https://github.com/stardist/stardist-napari/issues', 'User Support, https://forum.image.sc/tag/stardist', 'Twitter, https://twitter.com/martweig']",,,stardist-napari.widget,stardist-napari.data.nuclei_2d,,,,https://pypi.org/project/stardist-napari,https://github.com/stardist/stardist-napari, -434,Surforama,0.0.9,,,surforama,Kyle Harrington,surforama@kyleharrington.com,MIT,,a tool for using surfaces to explore volumetric data in napari,>=3.8,"['magicgui', 'mrcfile', 'numpy', 'pooch', 'qtpy', 'pyacvd', 'pyvista', 'rich', 'scikit-image', 'starfile', 'trimesh', 'typer', ""napari ; extra == 'dev'"", ""pyqt5 ; extra == 'dev'"", ""pytest ; extra == 'dev'"", ""pytest-cov ; extra == 'dev'"", ""pytest-qt ; extra == 'dev'"", ""tox ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""napari[all] ; extra == 'napari'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]","# surforama +458,Surforama,0.0.9,,,surforama,Kyle Harrington,surforama@kyleharrington.com,MIT,,a tool for using surfaces to explore volumetric data in napari,>=3.8,"['magicgui', 'mrcfile', 'numpy', 'pooch', 'qtpy', 'pyacvd', 'pyvista', 'rich', 'scikit-image', 'starfile', 'trimesh', 'typer', ""napari ; extra == 'dev'"", ""pyqt5 ; extra == 'dev'"", ""pytest ; extra == 'dev'"", ""pytest-cov ; extra == 'dev'"", ""pytest-qt ; extra == 'dev'"", ""tox ; extra == 'dev'"", ""pre-commit ; extra == 'dev'"", ""napari[all] ; extra == 'napari'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]","# surforama a napari-based tool for using surfaces to explore volumetric data in napari inspired by [membranorama](https://github.com/dtegunov/membranorama) @@ -43929,7 +45798,7 @@ We use pre-commit to keep the code tidy. Install the pre-commit hooks to activat pre-commit install ``` ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/cellcanvas/surforama/issues', 'Documentation, https://github.com/cellcanvas/surforama#README.md', 'Source Code, https://github.com/cellcanvas/surforama', 'User Support, https://github.com/cellcanvas/surforama/issues']",surforama.mesh_reader,,surforama.make_widget,surforama.thylakoid,['*.obj'],,,https://pypi.org/project/surforama,, -435,napari Detect Spots,0.0.1,,,test-detect-spots,Kevin Lai,klai@chanzuckerberg.com,BSD-3-Clause,,A dummy plugin to learn how to create plugins,>=3.8,"['numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# test-detect-spots +459,napari Detect Spots,0.0.1,,,test-detect-spots,Kevin Lai,klai@chanzuckerberg.com,BSD-3-Clause,,A dummy plugin to learn how to create plugins,>=3.8,"['numpy', 'magicgui', 'qtpy', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# test-detect-spots [![License BSD-3](https://img.shields.io/pypi/l/test-detect-spots.svg?color=green)](https://github.com/klai95/test-detect-spots/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/test-detect-spots.svg?color=green)](https://pypi.org/project/test-detect-spots) @@ -43991,7 +45860,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']",,,,test-detect-spots.make_func_widget,,,,,https://pypi.org/project/test-detect-spots,, -436,the-segmentation-game,0.2.0,2022-06-16,2023-06-18,the-segmentation-game,"Robert Haase, Martin Schätz",robert.haase@tu-dresden.de,BSD-3-Clause,https://github.com/haesleinhuepf/the-segmentation-game,Gamified image segmentation quality estimation,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari-tools-menu', 'napari-skimage-regionprops', 'scikit-learn']","# The segmentation game - for napari +460,the-segmentation-game,0.2.0,2022-06-16,2023-06-18,the-segmentation-game,"Robert Haase, Martin Schätz",robert.haase@tu-dresden.de,BSD-3-Clause,https://github.com/haesleinhuepf/the-segmentation-game,Gamified image segmentation quality estimation,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'napari-tools-menu', 'napari-skimage-regionprops', 'scikit-learn']","# The segmentation game - for napari [![License](https://img.shields.io/pypi/l/the-segmentation-game.svg?color=green)](https://github.com/haesleinhuepf/the-segmentation-game/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/the-segmentation-game.svg?color=green)](https://pypi.org/project/the-segmentation-game) @@ -44124,7 +45993,7 @@ If you encounter any problems, please open a thread on [image.sc](https://image. [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/haesleinhuepf/the-segmentation-game/issues', 'Documentation, https://github.com/haesleinhuepf/the-segmentation-game#README.md', 'Source Code, https://github.com/haesleinhuepf/the-segmentation-game', 'User Support, https://github.com/haesleinhuepf/the-segmentation-game/issues']",,,the-segmentation-game.TheSegmentationGameWidget,,,,,https://pypi.org/project/the-segmentation-game,https://github.com/haesleinhuepf/the-segmentation-game, -437,Tootapari,0.0.1,2023-08-02,2023-08-02,tootapari,Kyle Harrington,czi@kyleharrington.com,BSD-3-Clause,https://github.com/kephale/tootapari,A plugin to send Mastodon toots from napari,>=3.8,"['numpy', 'python-dotenv', 'Mastodon.py', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# tootapari +461,Tootapari,0.0.1,2023-08-02,2023-08-02,tootapari,Kyle Harrington,czi@kyleharrington.com,BSD-3-Clause,https://github.com/kephale/tootapari,A plugin to send Mastodon toots from napari,>=3.8,"['numpy', 'python-dotenv', 'Mastodon.py', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'""]","# tootapari [![License BSD-3](https://img.shields.io/pypi/l/tootapari.svg?color=green)](https://github.com/kephale/tootapari/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/tootapari.svg?color=green)](https://pypi.org/project/tootapari) @@ -44199,7 +46068,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/kephale/tootapari/issues', 'Documentation, https://github.com/kephale/tootapari#README.md', 'Source Code, https://github.com/kephale/tootapari', 'User Support, https://github.com/kephale/tootapari/issues']",,,tootapari.make_qwidget,,,,,https://pypi.org/project/tootapari,https://github.com/kephale/tootapari, -438,Tracking Challenge Solver,0.0.8,,,tracking-challenge-demo,Draga Doncila,ddoncila@gmail.com,BSD-3-Clause,,"A demo plugin to load, segment and save tracking challenge data.",>=3.8,"['dask[array]', 'imagecodecs', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'scikit-image', 'tifffile', ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]","# tracking-challenge-demo +462,Tracking Challenge Solver,0.0.8,,,tracking-challenge-demo,Draga Doncila,ddoncila@gmail.com,BSD-3-Clause,,"A demo plugin to load, segment and save tracking challenge data.",>=3.8,"['dask[array]', 'imagecodecs', 'napari', 'napari-plugin-engine >=0.1.4', 'numpy', 'scikit-image', 'tifffile', ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""tox ; extra == 'testing'""]","# tracking-challenge-demo [![License](https://img.shields.io/pypi/l/tracking-challenge-demo.svg?color=green)](https://github.com/DragaDoncila/tracking-challenge-demo/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/tracking-challenge-demo.svg?color=green)](https://pypi.org/project/tracking-challenge-demo) @@ -44267,7 +46136,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['Bug Tracker, https://github.com/DragaDoncila/tracking-challenge-demo/issues', 'Documentation, https://github.com/DragaDoncila/tracking-challenge-demo#README.md', 'Source Code, https://github.com/DragaDoncila/tracking-challenge-demo', 'User Support, https://github.com/DragaDoncila/tracking-challenge-demo/issues']",tracking-challenge-demo.get_reader,tracking-challenge-demo.write_single_image,tracking-challenge-demo.make_qwidget,,,['.zip'],,https://pypi.org/project/tracking-challenge-demo,, -439,Tracktour,0.0.3rc1,,,tracktour,Draga Doncila Pop,Draga Doncila Pop ,BSD 3-Clause,,Network flow based tracker with guided error correction,>=3.8,"['gurobipy', 'imagecodecs', 'networkx', 'numpy', 'pandas', 'pydantic', 'scikit-image', 'scipy', 'tifffile', 'tqdm', 'typer', ""pre-commit; extra == 'dev'"", ""arboretum; extra == 'napari'"", ""napari; extra == 'napari'"", ""napari-graph; extra == 'napari'"", ""pytest>=6.0; extra == 'test'""]","# tracktour +463,Tracktour,0.0.3rc1,,,tracktour,Draga Doncila Pop,Draga Doncila Pop ,BSD 3-Clause,,Network flow based tracker with guided error correction,>=3.8,"['gurobipy', 'imagecodecs', 'networkx', 'numpy', 'pandas', 'pydantic', 'scikit-image', 'scipy', 'tifffile', 'tqdm', 'typer', ""pre-commit; extra == 'dev'"", ""arboretum; extra == 'napari'"", ""napari; extra == 'napari'"", ""napari-graph; extra == 'napari'"", ""pytest>=6.0; extra == 'test'""]","# tracktour [![License](https://img.shields.io/pypi/l/tracktour.svg?color=green)](https://github.com/DragaDoncila/tracktour/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/tracktour.svg?color=green)](https://pypi.org/project/tracktour) @@ -44349,7 +46218,7 @@ $ tracktour ctc /path/to/seg/ /path/to/save/ -k 8 Please feel free to open issues with feature requests, bug reports, questions on usage, etc. ","['Framework :: napari', 'Intended Audience :: Science/Research', 'License :: OSI Approved :: GNU General Public License v3 (GPLv3)', 'Operating System :: OS Independent', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Topic :: Scientific/Engineering :: Image Processing', 'Topic :: Scientific/Engineering :: Information Analysis', 'Topic :: Scientific/Engineering :: Visualization']","['homepage, https://github.com/DragaDoncila/tracktour', 'repository, https://github.com/DragaDoncila/tracktour']",,,tracktour.merge_explorer,,,,,https://pypi.org/project/tracktour,, -440,vessel-express-napari,0.0.9,2022-08-19,2023-07-26,vessel-express-napari,Lennart Kowitz,lennart.kowitz@isas.de,BSD-3-Clause,https://github.com/MMV-Lab/vessel-express-napari,A simple plugin for 3D vessel segmentation,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'itk', 'scikit-image', 'aicssegmentation']","# vessel-express-napari +464,vessel-express-napari,0.0.9,2022-08-19,2023-07-26,vessel-express-napari,Lennart Kowitz,lennart.kowitz@isas.de,BSD-3-Clause,https://github.com/MMV-Lab/vessel-express-napari,A simple plugin for 3D vessel segmentation,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'itk', 'scikit-image', 'aicssegmentation']","# vessel-express-napari [![License](https://img.shields.io/pypi/l/vessel-express-napari.svg?color=green)](https://github.com/MMV-Lab/vessel-express-napari/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/vessel-express-napari.svg?color=green)](https://pypi.org/project/vessel-express-napari/) @@ -44418,7 +46287,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [quick start guide]: https://github.com/MMV-Lab/vessel-express-napari/blob/main/quick_start.md ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']","['Bug Tracker, https://github.com/MMV-Lab/vessel-express-napari/issues', 'Documentation, https://github.com/MMV-Lab/vessel-express-napari#README.md', 'Source Code, https://github.com/MMV-Lab/vessel-express-napari', 'User Support, https://github.com/MMV-Lab/vessel-express-napari/issues']",vessel-express-napari.napari_get_reader,,vessel-express-napari.ParameterTuning,,['*'],,,https://pypi.org/project/vessel-express-napari,https://github.com/MMV-Lab/vessel-express-napari, -441,vollseg-napari,2.4.7,2022-08-18,2023-06-18,vollseg-napari,Varun Kapoor,varun.kapoor@kapoorlabs.org,BSD 3-Clause,https://github.com/kapoorlab/vollseg-napari,Irregular cell shape segmentation using VollSeg,>=3.7,"['vollseg', 'napari >=0.4.13', 'magicgui >=0.4.0', 'pyqt6', 'pynvml', 'tensorflow ; platform_system != ""Darwin"" or platform_machine != ""arm64""', 'tensorflow-macos ; platform_system == ""Darwin"" and platform_machine == ""arm64""', ""pytest ; extra == 'test'"", ""pytest-qt ; extra == 'test'"", ""napari[pyqt] >=0.4.13 ; extra == 'test'""]","# VollSeg Napari Plugin +465,vollseg-napari,2.4.7,2022-08-18,2023-06-18,vollseg-napari,Varun Kapoor,varun.kapoor@kapoorlabs.org,BSD 3-Clause,https://github.com/kapoorlab/vollseg-napari,Irregular cell shape segmentation using VollSeg,>=3.7,"['vollseg', 'napari >=0.4.13', 'magicgui >=0.4.0', 'pyqt6', 'pynvml', 'tensorflow ; platform_system != ""Darwin"" or platform_machine != ""arm64""', 'tensorflow-macos ; platform_system == ""Darwin"" and platform_machine == ""arm64""', ""pytest ; extra == 'test'"", ""pytest-qt ; extra == 'test'"", ""napari[pyqt] >=0.4.13 ; extra == 'test'""]","# VollSeg Napari Plugin @@ -44465,7 +46334,7 @@ VollSeg comes with different options to combine CARE based denoising with UNET, - If you have technical questions or found a bug, feel free to [open an issue](https://github.com/kapoorlab/vollseg-napari/issues). ","['Development Status :: 4 - Beta', 'Intended Audience :: Science/Research', 'Topic :: Scientific/Engineering', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Framework :: napari']","['Source Code, https://github.com/kapoorlab/vollseg-napari', 'Documentation, https://github.com/kapoorlab/vollseg-napari', 'Bug Tracker, https://github.com/kapoorlab/vollseg-napari/issues', 'User Support, https://forum.image.sc/tag/vollseg-napari', 'Twitter, https://twitter.com/entracod']",,,vollseg-napari.widget,vollseg-napari.test_image_ascadian_3d,,,,https://pypi.org/project/vollseg-napari,https://github.com/kapoorlab/vollseg-napari, -442,VollSeg Napari MTrack Plugin,1.4.7,2023-04-11,2023-06-18,vollseg-napari-mtrack,Varun Kapoor,randomaccessiblekapoor@gmail.com,BSD-3-Clause,https://github.com/Kapoorlabs-CAPED/vollseg-napari-mtrack,"Segment kymographs of microtubules, actin filaments and perform Ransac based fits to compute dynamic instability parameters for individual kymographs and also in batch",>=3.8,"['numpy', 'magicgui', 'qtpy', 'caped-ai', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# vollseg-napari-mtrack +466,VollSeg Napari MTrack Plugin,1.4.7,2023-04-11,2023-06-18,vollseg-napari-mtrack,Varun Kapoor,randomaccessiblekapoor@gmail.com,BSD-3-Clause,https://github.com/Kapoorlabs-CAPED/vollseg-napari-mtrack,"Segment kymographs of microtubules, actin filaments and perform Ransac based fits to compute dynamic instability parameters for individual kymographs and also in batch",>=3.8,"['numpy', 'magicgui', 'qtpy', 'caped-ai', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# vollseg-napari-mtrack [![License BSD-3](https://img.shields.io/pypi/l/vollseg-napari-mtrack.svg?color=green)](https://github.com/Kapoorlabs-CAPED/vollseg-napari-mtrack/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/vollseg-napari-mtrack.svg?color=green)](https://pypi.org/project/vollseg-napari-mtrack) @@ -44536,7 +46405,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/Kapoorlabs-CAPED/vollseg-napari-mtrack/issues', 'Documentation, https://github.com/Kapoorlabs-CAPED/vollseg-napari-mtrack#README.md', 'Source Code, https://github.com/Kapoorlabs-CAPED/vollseg-napari-mtrack', 'User Support, https://github.com/Kapoorlabs-CAPED/vollseg-napari-mtrack/issues']",vollseg-napari-mtrack.get_reader,,vollseg-napari-mtrack.widget,vollseg-napari-mtrack.get_microtubule_test_data,,,,https://pypi.org/project/vollseg-napari-mtrack,https://github.com/Kapoorlabs-CAPED/vollseg-napari-mtrack, -443,vollseg-napari-trackmate,2.6.0,,,vollseg-napari-trackmate,"Varun Kapoor, Mari Tolonen, Jakub Sedzinski",randomaccessiblekapoor@gmail.com,BSD-3-Clause,,Track analysis using TrackMate xml and csv generated tracks using NapaTrackMater as the base library,>=3.8,"['napari-plugin-engine >=0.1.4', 'caped-ai', ""tox ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari ; extra == 'testing'"", ""pyqt5 ; extra == 'testing'""]","# vollseg-napari-trackmate +467,vollseg-napari-trackmate,2.6.2,,,vollseg-napari-trackmate,"Varun Kapoor, Mari Tolonen, Jakub Sedzinski",randomaccessiblekapoor@gmail.com,BSD-3-Clause,,Track analysis using TrackMate xml and csv generated tracks using NapaTrackMater as the base library,>=3.8,"['napari-plugin-engine>=0.1.4', 'caped-ai', 'tox; extra == ""testing""', 'pytest; extra == ""testing""', 'pytest-cov; extra == ""testing""', 'pytest-qt; extra == ""testing""', 'napari; extra == ""testing""', 'pyqt5; extra == ""testing""']","# vollseg-napari-trackmate [![License BSD-3](https://img.shields.io/pypi/l/vollseg-napari-trackmate.svg?color=green)](https://github.com/Kapoorlabs-CAPED/vollseg-napari-trackmate/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/vollseg-napari-trackmate.svg?color=green)](https://pypi.org/project/vollseg-napari-trackmate) @@ -44610,7 +46479,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc [pip]: https://pypi.org/project/pip/ [PyPI]: https://pypi.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Scientific/Engineering :: Image Processing']","['Bug Tracker, https://github.com/Kapoorlabs-CAPED/vollseg-napari-trackmate/issues', 'Documentation, https://github.com/Kapoorlabs-CAPED/vollseg-napari-trackmate#README.md', 'Source Code, https://github.com/Kapoorlabs-CAPED/vollseg-napari-trackmate', 'User Support, https://github.com/Kapoorlabs-CAPED/vollseg-napari-trackmate/issues']",,,vollseg-napari-trackmate.widget,vollseg-napari-trackmate.get_test_tracks_xenopus,,,,https://pypi.org/project/vollseg-napari-trackmate,, -444,waver,0.0.4,2021-09-21,2023-06-16,waver,Nicholas Sofroniew,sofroniewn@gmail.com,BSD-3,https://github.com/sofroniewn/waver,Wave simulations,>=3.7,"['magicgui (>=0.2.10)', 'napari (>=0.4.10)', 'napari-plugin-engine (>=0.1.4)', 'numpy', 'zarr']","# waver +468,waver,0.0.4,2021-09-21,2023-06-16,waver,Nicholas Sofroniew,sofroniewn@gmail.com,BSD-3,https://github.com/sofroniewn/waver,Wave simulations,>=3.7,"['magicgui (>=0.2.10)', 'napari (>=0.4.10)', 'napari-plugin-engine (>=0.1.4)', 'numpy', 'zarr']","# waver [![License](https://img.shields.io/pypi/l/waver.svg?color=green)](https://github.com/sofroniewn/waver/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/waver.svg?color=green)](https://pypi.org/project/waver) @@ -44815,7 +46684,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 2 - Pre-Alpha', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']",,waver.napari_get_reader,,waver.simulation,,['*'],,,https://pypi.org/project/waver,https://github.com/sofroniewn/waver, -445,workshop demo,0.0.2,2022-01-28,2023-06-18,workshop-demo,Draga Doncila Pop,ddoncilapop@contractor.chanzuckerberg.com,BSD-3-Clause,https://github.com/DragaDoncila/workshop-demo,"A demo napari plugin incorporating reader, writer and dock widget contributions using the new npe2 plugin architecture.",>=3.7,"['dask[array]', 'imagecodecs', 'napari', 'napari-plugin-engine (>=0.1.4)', 'npe2', 'numpy', 'scikit-image', 'tifffile']","# workshop-demo +469,workshop demo,0.0.2,2022-01-28,2023-06-18,workshop-demo,Draga Doncila Pop,ddoncilapop@contractor.chanzuckerberg.com,BSD-3-Clause,https://github.com/DragaDoncila/workshop-demo,"A demo napari plugin incorporating reader, writer and dock widget contributions using the new npe2 plugin architecture.",>=3.7,"['dask[array]', 'imagecodecs', 'napari', 'napari-plugin-engine (>=0.1.4)', 'npe2', 'numpy', 'scikit-image', 'tifffile']","# workshop-demo [![License](https://img.shields.io/pypi/l/workshop-demo.svg?color=green)](https://github.com/DragaDoncila/workshop-demo/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/workshop-demo.svg?color=green)](https://pypi.org/project/workshop-demo) @@ -44955,7 +46824,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: MacOS :: MacOS X', 'Operating System :: POSIX :: Linux', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Programming Language :: Python :: 3.10', 'Topic :: Software Development :: Testing']","['Bug Tracker, https://github.com/DragaDoncila/workshop-demo/issues', 'Documentation, https://github.com/DragaDoncila/workshop-demo#README.md', 'Source Code, https://github.com/DragaDoncila/workshop-demo', 'User Support, https://github.com/DragaDoncila/workshop-demo/issues']",workshop-demo.get_reader,workshop-demo.write_labels,workshop-demo.get_segment_widget,,,['.zip'],,https://pypi.org/project/workshop-demo,https://github.com/DragaDoncila/workshop-demo, -446,World2Data,0.0.3,2022-02-13,2023-06-18,World2Data,"Marc Boucsein, Robin Koch",,BSD-3,https://github.com/MBPhys/World2Data,A napari plugin in order to convert the world information to the data of a 2D/3D layer,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'gryds', 'dask', 'scikit-image']","# World2Data +470,World2Data,0.0.3,2022-02-13,2023-06-18,World2Data,"Marc Boucsein, Robin Koch",,BSD-3,https://github.com/MBPhys/World2Data,A napari plugin in order to convert the world information to the data of a 2D/3D layer,>=3.7,"['napari-plugin-engine (>=0.1.4)', 'numpy', 'gryds', 'dask', 'scikit-image']","# World2Data [![License](https://img.shields.io/pypi/l/napari-medical-image-formats.svg?color=green)](https://github.com/MBPhys/World2Data/raw/master/LICENSE) [![PyPI](https://img.shields.io/pypi/v/World2Data.svg?color=green)](https://pypi.org/project/World2Data) @@ -45004,7 +46873,7 @@ If you encounter any problems, please [file an issue] along with a detailed desc ","['Development Status :: 4 - Beta', 'Intended Audience :: Developers', 'Framework :: napari', 'Topic :: Software Development :: Testing', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', 'Programming Language :: Python :: 3.9', 'Operating System :: OS Independent', 'License :: OSI Approved :: BSD License']",,,,World2Data.World2Data,,,,,https://pypi.org/project/World2Data,https://github.com/MBPhys/World2Data, -447,yt-napari,0.5.0,2022-06-16,2024-06-11,yt-napari,Chris Havlin,chris.havlin@gmail.com,BSD-3-Clause,https://github.com/data-exp-lab/yt-napari,A napari plugin for loading data from yt,>=3.8,"['magicgui >=0.6.1', 'napari >=0.4.19', 'numpy', 'packaging', 'pydantic >2.0', 'qtpy', 'unyt', 'yt >=4.0.1', ""pytest ; extra == 'dev'"", ""pytest-qt ; extra == 'dev'"", ""taskipy ; extra == 'dev'"", ""sphinx ; extra == 'docs'"", ""nbsphinx <0.8.8 ; extra == 'docs'"", ""sphinx-jsonschema <1.19.0 ; extra == 'docs'"", ""Jinja2 <3.1.0 ; extra == 'docs'"", ""dask[array,distributed] ; extra == 'full'""]","# yt-napari +471,yt-napari,0.5.0,2022-06-16,2024-06-11,yt-napari,Chris Havlin,chris.havlin@gmail.com,BSD-3-Clause,https://github.com/data-exp-lab/yt-napari,A napari plugin for loading data from yt,>=3.8,"['magicgui >=0.6.1', 'napari >=0.4.19', 'numpy', 'packaging', 'pydantic >2.0', 'qtpy', 'unyt', 'yt >=4.0.1', ""pytest ; extra == 'dev'"", ""pytest-qt ; extra == 'dev'"", ""taskipy ; extra == 'dev'"", ""sphinx ; extra == 'docs'"", ""nbsphinx <0.8.8 ; extra == 'docs'"", ""sphinx-jsonschema <1.19.0 ; extra == 'docs'"", ""Jinja2 <3.1.0 ; extra == 'docs'"", ""dask[array,distributed] ; extra == 'full'""]","# yt-napari [![License](https://img.shields.io/pypi/l/yt-napari.svg?color=green)](https://github.com/data-exp-lab/yt-napari/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/yt-napari.svg?color=green)](https://pypi.org/project/yt-napari) @@ -45288,7 +47157,7 @@ https://napari.org/plugins/stable/index.html [PyPI]: https://pypi.org/ [yt]: https://yt-project.org/ ","['Development Status :: 2 - Pre-Alpha', 'Framework :: napari', 'Intended Audience :: Developers', 'License :: OSI Approved :: BSD License', 'Operating System :: OS Independent', 'Programming Language :: Python', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3 :: Only', 'Topic :: Software Development :: Testing']","['Bug Tracker, https://github.com/data-exp-lab/yt-napari/issues', 'Documentation, https://github.com/data-exp-lab/yt-napari#README.md', 'Source Code, https://github.com/data-exp-lab/yt-napari', 'User Support, https://github.com/data-exp-lab/yt-napari/issues']",yt-napari.get_reader,,yt-napari.reader_widget,,['*.json'],,,https://pypi.org/project/yt-napari,https://github.com/data-exp-lab/yt-napari, -448,zarpaint,0.4.0,2023-11-18,2024-06-28,zarpaint,Abigail S McGovern and Juan Nunez-Iglesias,juan.nunez-iglesias@monash.edu,BSD-3,https://pypi.org/project/zarpaint,Paint segmentations directly to on-disk/remote zarr arrays,>=3.7,"['magicgui', 'napari >=0.4.19', 'numpy', 'pyyaml', 'qtpy', 'scipy', 'scikit-image >=0.21', 'toolz', 'zarr <3,>=2.11', ""tensorstore ; extra == 'all'"", ""coverage ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari[pyqt5] ; extra == 'testing'""]","# zarpaint +472,zarpaint,0.4.0,2023-11-18,2024-12-04,zarpaint,Abigail S McGovern and Juan Nunez-Iglesias,juan.nunez-iglesias@monash.edu,BSD-3,https://pypi.org/project/zarpaint,Paint segmentations directly to on-disk/remote zarr arrays,>=3.7,"['magicgui', 'napari >=0.4.19', 'numpy', 'pyyaml', 'qtpy', 'scipy', 'scikit-image >=0.21', 'toolz', 'zarr <3,>=2.11', ""tensorstore ; extra == 'all'"", ""coverage ; extra == 'testing'"", ""pytest ; extra == 'testing'"", ""pytest-cov ; extra == 'testing'"", ""pytest-qt ; extra == 'testing'"", ""napari[pyqt5] ; extra == 'testing'""]","# zarpaint [![License](https://img.shields.io/pypi/l/zarpaint.svg?color=green)](https://github.com/jni/zarpaint/raw/main/LICENSE) [![PyPI](https://img.shields.io/pypi/v/zarpaint.svg?color=green)](https://pypi.org/project/zarpaint) diff --git a/plugins/Napari-VASCilia.html b/plugins/Napari-VASCilia.html index c81d975..17480aa 100644 --- a/plugins/Napari-VASCilia.html +++ b/plugins/Napari-VASCilia.html @@ -90,7 +90,7 @@

Version:

    -
  • 1.0.0
    • +
  • 1.3.0
@@ -200,7 +200,7 @@

Requirements:

-
  • numpy
  • tox ; extra == 'testing'
  • pytest ; extra == 'testing'
  • pytest-cov ; extra == 'testing'
+
  • numpy
  • tox; extra == "testing"
  • pytest; extra == "testing"
  • pytest-cov; extra == "testing"
@@ -295,7 +295,7 @@

VASCilia (Vision Analysis StereoCilia): A Napari Plugin for

Furthermore, we are committed to supporting research growth with a comprehensive training section for those looking to explore different staining techniques or develop new segmentation models through annotation and refinement.

VASCilia is here to support researchers in their quest for deeper understanding and innovation in the study of cochlear structures.
click the image to see a highlights reel of the plugin

-

Watch the video

+

Watch the video

Click me to see a video demo of the entire workflow

How to install :

STEP1[Install WSL]:
@@ -303,7 +303,7 @@

How to install :

wsl --install -d Ubuntu-20.04 2. After the setup successfully completes, reboot your computer. Open Ubuntu by typing "Ubuntu" in the search bar. A pop-up window for Ubuntu will appear. To check if CUDA and the GPU are correctly installed and available, type nvidia-smi in the terminal

STEP2[Download the deep learning trained models]: -1. Download the VASCilia_trained_models from https://www.dropbox.com/scl/fo/xh40g5htgw6lnzxfaqf8f/h?rlkey=9di5nl7f1uq2v623cfc9gki7j&dl=0
+1. Download the VASCilia_trained_models from https://www.dropbox.com/scl/fo/jsvldda8yvma3omfijxxn/ALeDfYUbiOuj69Flbc728rs?rlkey=mtilfz33qiizpul7uyisud5st&st=41kjlbw0&dl=0 now you should have a folder called 'models'

  • 📁 models [Trained models]
      @@ -312,6 +312,8 @@

      How to install :

    • 📁 region_prediction [has weights for region prediction]
    • 📁 seg_model [has the weights for the 3D instance segmentation model]
    • 📁 Train_predict_stereocilia_exe [executible needed by the plugin to segment and retrain the model using WSL]
      • +
    • 📁 ZFT_trim_model [deep learning model weights for z focus tracker algorithm]
      • +
    • 📁 rotation_correction_model [deep learning model weights for correcting the orientation of the stack]
@@ -320,7 +322,7 @@

How to install :

create a folder, called raw_data folder and put the downloaded dataset inside the raw_data folder

  • 📁 raw_data [raw data (stacks) is placed here]
      -
    • 📄 Litter 12 Mouse 1 MIDDLE - delBUNdelCAP_Airyscan Processing.czi
      • +
    • 📄 Litter 12 Mouse 4 MIDDLE - delBUNdelCAP_Airyscan Processing.czi
@@ -339,12 +341,14 @@

Option A: Cloning the Repository:

pip install -e . napari

Option B: Installing via PyPI:

-

sh -conda create -y -n napari-VASCilia -c conda-forge python=3.10 -conda activate napari-VASCilia -pip install -r requirements.txt -pip install napari-vascilia -napari +

```sh +conda create -y -n napari-VASCilia -c conda-forge python=3.10
+conda activate napari-VASCilia

+

Download the requirements.txt file from this repository and ensure you have it in your working directory.

+

pip install -r requirements.txt +pip install Napari-VASCilia +napari
+``` Post-installation:
1. Activate the plugin through Plugins -> VASCilia UI (Napari-VASCilia). 2. This will generate the config.json file at C:/Users/Username/.napari-vascilia/config.json. Update the paths in config.json as needed. @@ -359,20 +363,26 @@

Option B: Installing via PyPI:

Please update the /.../ portion according to your paths:

sh { -"rootfolder": "C:/Users/.../processed_data/", -"wsl_executable": "C:/Users/.../models/Train_predict_stereocilia_exe/Train_Predict_stereocilia_exe_v2", -"model": "C:/Users/.../models/seg_model/stereocilia_v7/", -"model_output_path": "C:/Users/.../models/new_seg_model/stereocilia_v8/", -"model_region_prediction": "C:/Users/.../models/region_prediction/resnet50_best_checkpoint_resnet50_balancedclass.pth", -"model_celltype_identification": "C:/Users/.../models/cell_type_identification_model/", -"flag_to_resize": false, -"flag_to_pad": false, -"resize_dimension": 1200, -"pad_dimension": 1500, -"button_width": 60, -"button_height": 22 + "rootfolder": "C:/Users/.../processed_data/", + "wsl_executable": "C:/Users/.../models/Train_predict_stereocilia_exe/Train_Predict_stereocilia_exe_v2", + "model": "C:/Users/.../models/seg_model/stereocilia_v7/", + "model_output_path": "C:/Users/.../models/new_seg_model/stereocilia_v8/", + "model_region_prediction": "C:/Users/.../models/region_prediction/resnet50_best_checkpoint_resnet50_balancedclass.pth", + "model_celltype_identification": "C:/Users/.../models/cell_type_identification_model/", + "ZFT_trim_model": "C:/Users/.../models/ZFT_trim_model/", + "rotation_correction_model": "C:/Users/.../models/rotation_correction_model/", + "green_channel": 0, + "red_channel": 1, + "blue_channel": -1, + "signal_intensity_channel": 0, + "flag_to_resize": false, + "flag_to_pad": false, + "resize_dimension": 1200, + "pad_dimension": 1500, + "button_width": 100, + "button_height": 35 }

-

Congratulations :) 🎉, now you are ready to run: Run Napari_VASCilia_v1_0_0.py

+

Congratulations :) 🎉, now you can enjoy working with the plugin.

Unique about VASCilia :

VASCilia saves all the intermediate results and the variables inside a pickle file while the user is using it in a very effiecint way. That allows a super fast uploading for the analysis if the user or their supervisor wants to keep working or review the analysis steps.
Click me to learn how to upload a z-stack

@@ -382,8 +392,8 @@

How to use VASCilia :

  1. 'Open CZI Cochlea Files and Preprocess' button: read the CZI file.
  2. 'Upload Processed CZI Stack' button: Incase you already have processed the stack, then just uplead your Analysis_state.pkl that usually has all the variables needed to upload your analysis
    3. -
  3. 'Trim Full Stack' button: this button allows you to choose only the slices of interest (will be automated in the near future)
    4. -
  4. "Rotate' buttom: this button allows to rotate the stack to have proper analysis (will be automated in the near future)
    5. +
  5. 'Trim Full Stack' button: this button allows you to choose only the slices of interest (has been automated in v_1_1_0)
    6. +
  6. "Rotate' buttom: this button allows to rotate the stack to have proper analysis (has been automated in v_1_1_0)
  7. Segment with 3DBundleSeg: it is a two steps algorithm (2D detection + multi-object assignment algorithm across all slices) to produce robust 3D detection. 3DBundleSeg is the first instance segmentation model for stereocilia bundles in the literature. It is trained on P5 and P21 3D stacks (thousands of 2D instances) and it produces highly acccurate boundary delineation even in the most challenging datasets. Here are some examples:

@@ -438,6 +448,26 @@

How to use VASCilia :

7. Train New Model for 3DBundleSeg 'button': this button will start the training.

VASCilia also equipped with two more buttons for resetting (to facilitate transitions between analyzing several stacks) and also exit VASCilia.
We are still working on the documentation, so this gihub will be continiuosly updated.

+

Multi-Batch Processing Feature: Required File

+

The Multi-Batch Processing feature in this package requires an additional file: track_me_SORT_v3_exe.exe. This file is not included in the repository or the pip installation due to size constraints.

+

Download the File

+

You can download the file from the following link:
+[Download track_me_SORT_v3_exe.exe]*[https://www.dropbox.com/your-file-link]

+

If You Clone the Repository

+
    +
  1. Download the file from the link above.
    2. +
  2. Place the file in the following directory within the cloned repository: src/napari_vascilia/core/
    3. +
+

If You Installed the Package via pip

+
    +
  1. Download the file from the link above.
    2. +
  2. Locate the installation directory for the package. You can find the installation path by running the following Python code: +python +import napari_vascilia +print(napari_vascilia.__file__)
    3. +
  3. Place the downloaded file in the following directory: /src/napari_vascilia/core/
    +Note: All other features of the package will function as expected without this file. This file is exclusively for batch processing of multiple files.
    4. +

Testing Other Lab Data

Liberman Data Click me to see a video demo of the entire workflow
Artur Indzhykulian Data Click me to see a video demo of the entire workflow

@@ -478,7 +508,7 @@

Project Authors and Contacts

    -
  • 1.0.0
    • +
  • 1.3.0
@@ -613,7 +643,7 @@

Project Authors and Contacts

Requirements:

-
  • numpy
  • tox ; extra == 'testing'
  • pytest ; extra == 'testing'
  • pytest-cov ; extra == 'testing'
+
  • numpy
  • tox; extra == "testing"
  • pytest; extra == "testing"
  • pytest-cov; extra == "testing"
diff --git a/plugins/PartSeg.html b/plugins/PartSeg.html index 0b65aea..d37b04f 100644 --- a/plugins/PartSeg.html +++ b/plugins/PartSeg.html @@ -98,7 +98,7 @@

Last updated:

    -
  • 2024-10-02
    • +
  • 2024-12-24
@@ -1352,7 +1352,7 @@

0.9

updated:

    -
  • 2024-10-02
    • +
  • 2024-12-24
diff --git a/plugins/PoseR-napari.html b/plugins/PoseR-napari.html index 50c720f..566f333 100644 --- a/plugins/PoseR-napari.html +++ b/plugins/PoseR-napari.html @@ -90,7 +90,7 @@

Version:

    -
  • 0.0.1b3
    • +
  • 0.0.1b4
@@ -172,7 +172,7 @@

Requirements:

-
  • numpy
  • magicgui
  • qtpy
  • napari
  • napari-video
  • napari-plot
  • tables
  • imageio-ffmpeg (==0.4.8)
  • pytorch-lightning
  • test-tube
  • scikit-learn
  • matplotlib
  • numba
  • networkx
  • seaborn
  • tox ; extra == 'testing'
  • pytest ; extra == 'testing'
  • pytest-cov ; extra == 'testing'
  • pytest-qt ; extra == 'testing'
  • napari ; extra == 'testing'
  • pyqt5 ; extra == 'testing'
+
  • napari[all]==0.4.14
  • npe2==0.6.2
  • pydantic==1.10.4
  • numpy==1.23.5
  • magicgui
  • qtpy
  • napari-video
  • napari-plot==0.1.5
  • tables
  • imageio-ffmpeg==0.4.8
  • pytorch-lightning
  • test-tube
  • scikit-learn
  • matplotlib
  • numba
  • networkx
  • seaborn
  • ultralytics
  • torcheval==0.0.7
  • tox; extra == "testing"
  • pytest; extra == "testing"
  • pytest-cov; extra == "testing"
  • pytest-qt; extra == "testing"
  • napari; extra == "testing"
  • pyqt5; extra == "testing"
@@ -283,7 +283,7 @@

Installation

conda install pytorch torchvision torchaudio cpuonly -c pytorch

Install napari:

-
pip install napari["all"]
+
pip install napari[all]==0.4.14 npe2==0.6.2 pydantic==1.10.4
 

 
You can install PoseR via pip:

 
pip install PoseR-napari
@@ -291,6 +291,8 @@ 
Installation

 
To install latest development version :

 
pip install git+https://github.com/pnm4sfix/PoseR.git
 

+
Quick start

+
https://github.com/pnm4sfix/PoseR/blob/generalise-species/docs/QuickStart.md

 
Contributing

 
Contributions are very welcome. Tests can be run with tox, please ensure
 the coverage at least stays the same before you submit a pull request.

@@ -314,7 +316,7 @@ 
Issues

                                                 

                                                 
    
-                                                    
  • 0.0.1b3
    • 
+                                                    
  • 0.0.1b4
    • 
                                                 

                                             
                                         
@@ -421,7 +423,7 @@ 
Issues

                                             

                                                 

                                                     Requirements:

-                                                    
  • numpy
  • magicgui
  • qtpy
  • napari
  • napari-video
  • napari-plot
  • tables
  • imageio-ffmpeg (==0.4.8)
  • pytorch-lightning
  • test-tube
  • scikit-learn
  • matplotlib
  • numba
  • networkx
  • seaborn
  • tox ; extra == 'testing'
  • pytest ; extra == 'testing'
  • pytest-cov ; extra == 'testing'
  • pytest-qt ; extra == 'testing'
  • napari ; extra == 'testing'
  • pyqt5 ; extra == 'testing'

+                                                    
  • napari[all]==0.4.14
  • npe2==0.6.2
  • pydantic==1.10.4
  • numpy==1.23.5
  • magicgui
  • qtpy
  • napari-video
  • napari-plot==0.1.5
  • tables
  • imageio-ffmpeg==0.4.8
  • pytorch-lightning
  • test-tube
  • scikit-learn
  • matplotlib
  • numba
  • networkx
  • seaborn
  • ultralytics
  • torcheval==0.0.7
  • tox; extra == "testing"
  • pytest; extra == "testing"
  • pytest-cov; extra == "testing"
  • pytest-qt; extra == "testing"
  • napari; extra == "testing"
  • pyqt5; extra == "testing"

                                             

                                         
                                     
diff --git a/plugins/allencell-segmenter-ml.html b/plugins/allencell-segmenter-ml.html
index 1cd8e55..e7cb439 100644
--- a/plugins/allencell-segmenter-ml.html
+++ b/plugins/allencell-segmenter-ml.html
@@ -7,17 +7,17 @@
     
     
     
     
     
     
-    
-    
+    
+    
     
     
     
-    allencell-segmenter-ml - napari Plugin - Brian Kim, Chris Hughes, Daniel Saelid
+    allencell-segmenter-ml - napari Plugin - Not available
 
     
     
@@ -90,7 +90,7 @@
                                     

                                         
Version:

                                         
    
-                                            
  • 0.1.16rc1
    • 
+                                            
  • 0.1.17
    • 
                                         

                                     

                                 
@@ -227,7 +227,7 @@ 
A plugin to leverage ML segmentation in napari

                                 
                                 
    
                                     
  • 
-                                        Brian Kim, Chris Hughes, Daniel Saelid
+                                        Not available
                                     
    •                               
                             

                             
A plugin to leverage ML segmentation in napari
 }
         
         
Test and lint

+
This version is a release candidate currently undergoing testing and development.

+
Our team is actively working on this plugin and will have an official release with additional features very soon. 

+
Please keep an eye on this page for updates. 

+
In the meantime, please report any bugs here.

 
What is Allen Cell Segmenter ML

 
A deep learning-based segmentation Napari plugin to curate datasets, train your own model (UNET), and run inference on 2D and 3D cell data. 

 
📰 News

 
    
-
  • [2024.09.24] :tada: Initial release of the plugin and Megaseg models!
    • 
+
  • [2024.09.24] 🎉 Initial dev release of the plugin and Megaseg models!
    • 
 

-
:hammer_and_wrench: Installation

+
🛠️ Installation

 
System Requirements

 
We currently support Windows, MacOS, and Linux operating systems. The minimum system requirements are:

 
    
@@ -340,7 +344,7 @@ 
    Install the Plugin
    
 
    To install the latest version of the plugin:
 bash
 pip install allencell-segmenter-ml
    
-
    :rotating_light: Post-Installation :rotating_light:
    
+
    🚨 Post-Installation 🚨
    
 
    
 
    :memo: NOTE: This section is specifically for users with at least one NVIDIA GPU installed on their machine. Not sure if you have an NVIDIA GPU? You can check by running nvidia-smi as shown below. If you do not have an NVIDIA GPU system, you can skip this section.
    
 
    
@@ -449,7 +453,7 @@ 
    Issues
    
                                                 
    
                                                 
      
-                                                    
    • 0.1.16rc1
      • 
+                                                    
    • 0.1.17
      • 
                                                 
    
                                             

                                         
diff --git a/plugins/brainglobe-napari-io.html b/plugins/brainglobe-napari-io.html
index cee662f..721dc17 100644
--- a/plugins/brainglobe-napari-io.html
+++ b/plugins/brainglobe-napari-io.html
@@ -98,7 +98,7 @@
                                     

                                         
Last updated:

                                         
    
-                                            
  • 2024-04-23
    • 
+                                            
  • 2025-01-02
    • 
                                         

                                     

                                 
@@ -347,7 +347,7 @@ 
Issues

                                                     updated:

                                                 
    
-                                                    
  • 2024-04-23
    • 
+                                                    
  • 2025-01-02
    • 
                                                 

                                             
                                         
diff --git a/plugins/brainglobe-segmentation.html b/plugins/brainglobe-segmentation.html
index a78822b..56d8525 100644
--- a/plugins/brainglobe-segmentation.html
+++ b/plugins/brainglobe-segmentation.html
@@ -98,7 +98,7 @@
                                     

                                         
Last updated:

                                         
    
-                                            
  • 2024-09-17
    • 
+                                            
  • 2024-12-30
    • 
                                         

                                     

                                 
@@ -298,7 +298,7 @@ 
Citing brainglobe-segmentation

                                                     updated:

                                                 
    
-                                                    
  • 2024-09-17
    • 
+                                                    
  • 2024-12-30
    • 
                                                 

                                             
                                         
diff --git a/plugins/brainglobe-stitch.html b/plugins/brainglobe-stitch.html
new file mode 100644
index 0000000..a8a8b7e
--- /dev/null
+++ b/plugins/brainglobe-stitch.html
@@ -0,0 +1,529 @@
+
+
+
+
+
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    BrainGlobe Stitch - napari Plugin - Brainglobe Developers
+
+    
+    
+    
+    
+    
+    
+        
+        
+        
+    
+
+
+
+
+    

+        

+            

+            

+            

+            

+                
+                

+                    
+                

+            

+            

+                

+                    

+                        
+                        
+                        

+                                

+                                    
BrainGlobe Stitch

+                                

+
+                                
+   

+        
+        PyPI 
+    
+    

+                                                                
+                                

+                                    
A tool to stich large tiled datasets generated by the mesoSPIM.

+                                

+                                
    
+                                    
  • 
+                                        Brainglobe Developers
+                                    
    •                               
+                            

+                            
View
+                                    project data

+                            

+                                

+                                    

+                                        

+                                            

+                                            

+                                        

+                                    

+                                

+                                

+                                

+                                

+                                    

+
+                                        
+        
+        
Stitching tiled 3D light-sheet data in napari

+

+  Stitching a mouse brain acquired at a resolution of 4.06 µm/px, 4.06 µm/px, 5 µm/px using 4 tiles
+

+
+

+
A napari plugin for stitching tiled 3D acquisitions from a mesoSPIM light-sheet microscope.
+The plugin utilises BigStitcher to align the tiles and napari to visualise the stitched data.

+
Installation

+
We strongly recommend to use a virtual environment manager (like conda). The installation instructions below
+will not specify the Qt backend for napari, and you will therefore need to install that separately. Please see the
+napari installation instructions for further advice on this.

+
To install latest development version:

+
pip install git+https://github.com/brainglobe/brainglobe-stitch.git
+

+
This plugin requires Fiji to be installed on your system. You can download Fiji here.

+
The BigStitcher plugin must be installed in Fiji. Please follow the instructions here.

+
Seeking help or contributing

+
We are always happy to help users of our tools, and welcome any contributions. If you would like to get in contact with us for any reason, please see the contact page of our website.

+
Citation

+
If you find this package useful, please make sure to cite the original BigStitcher publication:

+

+
Hörl, D., Rojas Rusak, F., Preusser, F. et al. BigStitcher: reconstructing high-resolution image datasets of cleared and expanded samples. Nat Methods 16, 870–874 (2019). https://doi.org/10.1038/s41592-019-0501-0

+

+
License

+
Distributed under the terms of the BSD-3 license,
+"brainglobe-stitch" is free and open source software

+
Acknowledgements

+
This napari plugin was generated with Cookiecutter using napari's cookiecutter-napari-plugin template and the Neuroinformatics Unit's template.

+        
+
+                                    

+                                

+                                
+

+                                

+                                    

+                                        

+                                            

+                                                
Version:
+                                                

+                                                
    
+                                                    
  • 0.0.1
    • 
+                                                

+                                            

+                                        

+                                        

+                                            

+                                                
Last
+                                                    updated:

+                                                
    
+                                                    
  • Not available
    • 
+                                                

+                                            

+                                        

+                                        

+                                            

+                                                
First
+                                                    released:

+                                                
    
+                                                    
  • Not available
    • 
+                                                

+                                            

+                                        

+                                        

+                                            

+                                                
License:
+                                                

+                                                
+                                            

+                                        

+                                    

+                                    

+                                    

+                                    

+                                        

+                                            

+                                                
Supported
+                                                    data:

+                                                
    
+                                                    
  • Information
+                                                            not submitted
    • 
+                                                

+                                            

+                                        

+                                        

+                                            

+                                                
Plugin
+                                                    type:

+                                                    
+                                            

+                                        

+                                        

+                                            

+                                                
Open
+                                                    extension:

+                                                    
+                                            

+                                        

+                                        

+                                            

+                                                
Save
+                                                    extension:

+                                                    
+                                            

+                                        

+                                    

+                                    

+                                    

+                                    

+                                        
+                                        

+                                            

+                                                
Python versions
+                                                    supported:

+                                                    
+                                            

+                                        

+                                        

+                                            

+                                                
Operating
+                                                    system:

+                                                
    
+                                                    
  • Information
+                                                            not submitted
    • 
+                                                

+                                            

+                                        

+                                        

+                                            

+                                                

+                                                    Requirements:

+                                                    
  • napari>=0.4.18
  • brainglobe-utils>=0.3.4
  • h5py
  • napari-ome-zarr
  • ome-zarr
  • zarr
  • numpy
  • qtpy
  • tifffile
  • pytest; extra == "dev"
  • pytest-cov; extra == "dev"
  • pytest-mock; extra == "dev"
  • pytest-qt; extra == "dev"
  • pyqt5; extra == "dev"
  • coverage; extra == "dev"
  • tox; extra == "dev"
  • pooch; extra == "dev"
  • black; extra == "dev"
  • mypy; extra == "dev"
  • pre-commit; extra == "dev"
  • ruff; extra == "dev"
  • setuptools-scm; extra == "dev"

+                                            

+                                        

+                                    

+                                

+                                    
+

+                            

+                        

+                    

+                

+            

+            

+            

+                

+                    
+                            
+                        GitHub repo
+                        About napari hubFAQ link to napari hub
+
+                    

+                        

+                            Disclaimer: This experiment aims to replicate key functionalities of napari-hub 
+                            using minimal dynamic elements, including real-time search and daily content updates.
+                        

+                    

+                

+                The
+                    napari hub is a service of the Chan Zuckerberg
+                        Initiative in collaboration with napari.
+                        
+                 
+                

+                    
+                            Go to napari main website.
+                            
+                            
+                            
+                            
+                            
+                            
+                                
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                
+                                
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                
+                            
+                        
+                    

+                            
+                                
+                                
+                                
+                                
+                                
+                            
+                            
+                                
+                                    
+                                
+                            
+                        
+                

+            

+        

+    
+
diff --git a/plugins/brainglobe-utils.html b/plugins/brainglobe-utils.html
index f26c751..2dc76d5 100644
--- a/plugins/brainglobe-utils.html
+++ b/plugins/brainglobe-utils.html
@@ -90,7 +90,7 @@
                                     

                                         
Version:

                                         
    
-                                            
  • 0.6.2
    • 
+                                            
  • 0.6.3
    • 
                                         

                                     

                                 
@@ -98,7 +98,7 @@
                                     

                                         
Last updated:

                                         
    
-                                            
  • 2024-08-16
    • 
+                                            
  • 2025-01-02
    • 
                                         

                                     

                                 
@@ -172,7 +172,7 @@
                                 

                                     

                                         
Requirements:

-                                        
  • brainglobe-atlasapi>=2.0.1
  • brainglobe-space
  • configobj
  • natsort
  • nibabel>=2.1.0
  • numba
  • numpy
  • dask
  • pandas
  • psutil
  • pyarrow
  • PyYAML
  • scikit-image
  • scipy
  • slurmio
  • tifffile
  • tqdm
  • black; extra == "dev"
  • coverage; extra == "dev"
  • mypy; extra == "dev"
  • pre-commit; extra == "dev"
  • pyqt5; extra == "dev"
  • pytest-cov; extra == "dev"
  • pytest-qt; extra == "dev"
  • pytest-mock; extra == "dev"
  • pytest; extra == "dev"
  • ruff; extra == "dev"
  • scikit-image; extra == "dev"
  • setuptools-scm; extra == "dev"
  • tox; extra == "dev"
  • pooch; extra == "dev"
  • brainglobe-utils[napari]; extra == "dev"
  • brainglobe-utils[qt]; extra == "napari"
  • napari[all]; extra == "napari"
  • qtpy; extra == "qt"
  • superqt; extra == "qt"

+                                        
  • brainglobe-atlasapi>=2.0.1
  • brainglobe-space
  • configobj
  • natsort
  • nibabel>=2.1.0
  • numba
  • numpy
  • dask
  • pandas
  • psutil
  • pyarrow
  • PyYAML
  • scikit-image
  • scipy
  • slurmio
  • tifffile
  • tqdm
  • qtpy; extra == "qt"
  • superqt; extra == "qt"
  • brainglobe-utils[qt]; extra == "napari"
  • napari[all]; extra == "napari"
  • black; extra == "dev"
  • coverage; extra == "dev"
  • mypy; extra == "dev"
  • pre-commit; extra == "dev"
  • pyqt5; extra == "dev"
  • pytest-cov; extra == "dev"
  • pytest-qt; extra == "dev"
  • pytest-mock; extra == "dev"
  • pytest; extra == "dev"
  • ruff; extra == "dev"
  • scikit-image; extra == "dev"
  • setuptools_scm; extra == "dev"
  • tox; extra == "dev"
  • pooch; extra == "dev"
  • brainglobe-utils[napari]; extra == "dev"

                                     

                                 

                             
@@ -282,7 +282,7 @@ 
Citations for BrainGlobe tools

                                                 

                                                 
    
-                                                    
  • 0.6.2
    • 
+                                                    
  • 0.6.3
    • 
                                                 

                                             
                                         
@@ -292,7 +292,7 @@ 
Citations for BrainGlobe tools

                                                     updated:

                                                 
    
-                                                    
  • 2024-08-16
    • 
+                                                    
  • 2025-01-02
    • 
                                                 

                                             
                                         
@@ -389,7 +389,7 @@ 
Citations for BrainGlobe tools

                                             

                                                 

                                                     Requirements:

-                                                    
  • brainglobe-atlasapi>=2.0.1
  • brainglobe-space
  • configobj
  • natsort
  • nibabel>=2.1.0
  • numba
  • numpy
  • dask
  • pandas
  • psutil
  • pyarrow
  • PyYAML
  • scikit-image
  • scipy
  • slurmio
  • tifffile
  • tqdm
  • black; extra == "dev"
  • coverage; extra == "dev"
  • mypy; extra == "dev"
  • pre-commit; extra == "dev"
  • pyqt5; extra == "dev"
  • pytest-cov; extra == "dev"
  • pytest-qt; extra == "dev"
  • pytest-mock; extra == "dev"
  • pytest; extra == "dev"
  • ruff; extra == "dev"
  • scikit-image; extra == "dev"
  • setuptools-scm; extra == "dev"
  • tox; extra == "dev"
  • pooch; extra == "dev"
  • brainglobe-utils[napari]; extra == "dev"
  • brainglobe-utils[qt]; extra == "napari"
  • napari[all]; extra == "napari"
  • qtpy; extra == "qt"
  • superqt; extra == "qt"

+                                                    
  • brainglobe-atlasapi>=2.0.1
  • brainglobe-space
  • configobj
  • natsort
  • nibabel>=2.1.0
  • numba
  • numpy
  • dask
  • pandas
  • psutil
  • pyarrow
  • PyYAML
  • scikit-image
  • scipy
  • slurmio
  • tifffile
  • tqdm
  • qtpy; extra == "qt"
  • superqt; extra == "qt"
  • brainglobe-utils[qt]; extra == "napari"
  • napari[all]; extra == "napari"
  • black; extra == "dev"
  • coverage; extra == "dev"
  • mypy; extra == "dev"
  • pre-commit; extra == "dev"
  • pyqt5; extra == "dev"
  • pytest-cov; extra == "dev"
  • pytest-qt; extra == "dev"
  • pytest-mock; extra == "dev"
  • pytest; extra == "dev"
  • ruff; extra == "dev"
  • scikit-image; extra == "dev"
  • setuptools_scm; extra == "dev"
  • tox; extra == "dev"
  • pooch; extra == "dev"
  • brainglobe-utils[napari]; extra == "dev"

                                             

                                         
                                     
diff --git a/plugins/brainreg.html b/plugins/brainreg.html
index 6b2e128..acedbb3 100644
--- a/plugins/brainreg.html
+++ b/plugins/brainreg.html
@@ -98,7 +98,7 @@
                                     

                                         
Last updated:

                                         
    
-                                            
  • 2024-06-27
    • 
+                                            
  • 2025-01-02
    • 
                                         

                                     

                                 
@@ -392,7 +392,7 @@ 
Citing brainreg

                                                     updated:

                                                 
    
-                                                    
  • 2024-06-27
    • 
+                                                    
  • 2025-01-02
    • 
                                                 

                                             
                                         
diff --git a/plugins/brainrender-napari.html b/plugins/brainrender-napari.html
index 33ccd42..1c89ec3 100644
--- a/plugins/brainrender-napari.html
+++ b/plugins/brainrender-napari.html
@@ -98,7 +98,7 @@
                                     

                                         
Last updated:

                                         
    
-                                            
  • 2024-08-02
    • 
+                                            
  • 2024-12-12
    • 
                                         

                                     

                                 
@@ -300,7 +300,7 @@ 
Acknowledgements

                                                     updated:

                                                 
    
-                                                    
  • 2024-08-02
    • 
+                                                    
  • 2024-12-12
    • 
                                                 

                                             
                                         
diff --git a/plugins/brainways.html b/plugins/brainways.html
new file mode 100644
index 0000000..7b7c401
--- /dev/null
+++ b/plugins/brainways.html
@@ -0,0 +1,565 @@
+
+
+
+
+
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    Brainways - napari Plugin - Ben Kantor
+
+    
+    
+    
+    
+    
+    
+        
+        
+        
+    
+
+
+
+
+    

+        

+            

+            

+            

+            

+                
+                

+                    
+                

+            

+            

+                

+                    

+                        
+                        
+                        

+                                

+                                    
Brainways

+                                

+
+                                
+   

+        
+        PyPI 
+    
+    

+                                                                
+                                

+                                    
Brainways

+                                

+                                
    
+                                    
  • 
+                                        Ben Kantor
+                                    
    •                               
+                            

+                            
View
+                                    project data

+                            

+                                

+                                    

+                                        

+                                            

+                                            

+                                        

+                                    

+                                

+                                

+                                

+                                

+                                    

+
+                                        
+        
+        
DOI
+License GNU GPL v3.0
+PyPI
+Python Version
+tests
+codecov
+Documentation Status
+napari hub

+
+
What Is Brainways?

+
+
+
Brainways is an AI-based tool for automated registration, quantification and generation of brain-wide activity networks based on fluorescence in coronal slices.

+
Brainways UI

+
+
Why Brainways?

+
+
+
Coronal slice registration, cell quantification and whole-brain contrast analysis between experimental conditions should be made easily accessible from a single software, without requiring programming experience.
+Customization should be made easy by having a highly flexible pythonic backend.

+
Getting Started

+
To install and run brainways, run the following in your python environment:

+
bash
+pip install brainways
+brainways ui

+
Follow our getting started guide for more details.

+
How it works

+
Brainways allows users to register, quantify and provide statistical contrast analysis by following several simple steps:

+
    
+
  1. Rigid registration of coronal slices to a 3D atlas.
    2. 
+
  2. Non-rigid registration of coronal slices to a 3D atlas, to account for individual difference and imperfections in acquisition procedure.
    3. 
+
  3. Cell detection (using StarDist).
    4. 
+
  4. Quantification of cell counts per brain region.
    5. 
+
  5. Statistical analysis:
      
+
    • ANOVA contrast analysis.
      • 
+
    • PLS (Partial Least Square) analysis.
      • 
+
    • Network graph creation.
      • 
+
    
+
    6. 
+

+
+
+
Architecture

+
Brainways is implemented as three modules. brainways.ui contains the GUI implementation as a napari plugin. brainways.ui is using brainways as its backend. All of the functionality is implemented in the brainways package. This separation was done to guarantee that brainways is a GUI-agnostic software, and can be fully accessed and manipulated through python code to allow custom complex usage scenarios. The code that was used to train, evaluate and run the automatic registration model resides in brainways-reg-model.

+
Development Status

+
Brainways is being actively developed by Ben Kantor of Bartal lab, Tel Aviv University, Israel. Our releases can be found here.

+
Citation

+
If you use brainways, please cite Kantor and Bartal (2023):

+
@article{kantor2023brainways,
+  title={Brainways: An Open-Source AI-based Software For Registration and Analysis of Fluorescent   Markers on Coronal Brain Slices},
+  author={Kantor, Ben and Ben-Ami Bartal, Inbal},
+  journal={bioRxiv},
+  pages={2023--05},
+  year={2023},
+  publisher={Cold Spring Harbor Laboratory}
+}
+

+
License

+
Distributed under the terms of the GNU GPL v3.0 license,
+"brainways" is free and open source software

+
Issues

+
If you encounter any problems, please file an issue along with a detailed description.

+        
+
+                                    

+                                

+                                
+

+                                

+                                    

+                                        

+                                            

+                                                
Version:
+                                                

+                                                
    
+                                                    
  • 0.1.15
    • 
+                                                

+                                            

+                                        

+                                        

+                                            

+                                                
Last
+                                                    updated:

+                                                
    
+                                                    
  • Not available
    • 
+                                                

+                                            

+                                        

+                                        

+                                            

+                                                
First
+                                                    released:

+                                                
    
+                                                    
  • Not available
    • 
+                                                

+                                            

+                                        

+                                        

+                                            

+                                                
License:
+                                                

+                                                
+                                            

+                                        

+                                    

+                                    

+                                    

+                                    

+                                        

+                                            

+                                                
Supported
+                                                    data:

+                                                
    
+                                                    
  • Information
+                                                            not submitted
    • 
+                                                

+                                            

+                                        

+                                        

+                                            

+                                                
Plugin
+                                                    type:

+                                                    
+                                            

+                                        

+                                        

+                                            

+                                                
Open
+                                                    extension:

+                                                    
+                                            

+                                        

+                                        

+                                            

+                                                
Save
+                                                    extension:

+                                                    
+                                            

+                                        

+                                    

+                                    

+                                    

+                                    

+                                        
+                                        

+                                            

+                                                
Python versions
+                                                    supported:

+                                                    
+                                            

+                                        

+                                        

+                                            

+                                                
Operating
+                                                    system:

+                                                
    
+                                                    
  • Information
+                                                            not submitted
    • 
+                                                

+                                            

+                                        

+                                        

+                                            

+                                                

+                                                    Requirements:

+                                                    
  • aicsimageio[base-imageio]==4.14.0
  • aicspylibczi
  • brainglobe-atlasapi
  • click
  • dacite
  • datasets
  • fsspec
  • huggingface-hub
  • importlib-resources
  • itk-elastix
  • kornia
  • napari[all]>=0.5.0
  • natsort
  • networkx
  • numpy<2.0.0
  • opencv-contrib-python-headless
  • opencv-python-headless
  • openpyxl
  • pandas
  • paquo
  • pingouin
  • qtpy
  • scikit-image
  • scikit-learn
  • scikit-posthocs
  • stardist
  • statsmodels
  • tensorflow
  • toml
  • torch
  • torchvision
  • lightning
  • tqdm
  • scyjava
  • pre-commit; extra == "dev"
  • py; extra == "testing"
  • pyqt5; extra == "testing"
  • pytest; extra == "testing"
  • pytest-cov; extra == "testing"
  • pytest-mock; extra == "testing"
  • pytest-qt<4.1.0; extra == "testing"
  • tox; extra == "testing"

+                                            

+                                        

+                                    

+                                

+                                    
+

+                            

+                        

+                    

+                

+            

+            

+            

+                

+                    
+                            
+                        GitHub repo
+                        About napari hubFAQ link to napari hub
+
+                    

+                        

+                            Disclaimer: This experiment aims to replicate key functionalities of napari-hub 
+                            using minimal dynamic elements, including real-time search and daily content updates.
+                        

+                    

+                

+                The
+                    napari hub is a service of the Chan Zuckerberg
+                        Initiative in collaboration with napari.
+                        
+                 
+                

+                    
+                            Go to napari main website.
+                            
+                            
+                            
+                            
+                            
+                            
+                                
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                
+                                
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                
+                            
+                        
+                    

+                            
+                                
+                                
+                                
+                                
+                                
+                            
+                            
+                                
+                                    
+                                
+                            
+                        
+                

+            

+        

+    
+
diff --git a/plugins/cell-AAP.html b/plugins/cell-AAP.html
index 8c77b92..abb6322 100644
--- a/plugins/cell-AAP.html
+++ b/plugins/cell-AAP.html
@@ -90,7 +90,7 @@
                                     

                                         
Version:

                                         
    
-                                            
  • 0.0.7
    • 
+                                            
  • 0.0.8
    • 
                                         

                                     

                                 
@@ -160,7 +160,7 @@
                                 

                                     

                                         
Python versions supported:

-                                        
+                                        
    
                                     
    
                                 
    
                                 
    
@@ -172,7 +172,7 @@
                                 
    
                                     
    
                                         
    Requirements:
    
-                                        
    • napari[all] >=0.4.19
    • numpy >=1.26.4
    • opencv-python >=4.9.0
    • tifffile >=2024.2.12
    • torch >=2.3.0
    • torchvision >=0.18.0
    • scikit-image >=0.22.0
    • qtpy >=2.4.1
    • pillow >=10.3.0
    • scipy >=1.3.0
    • timm >=1.0.7
    
+                                        
    • napari[all]>=0.4.19
    • numpy==1.26.4
    • opencv-python>=4.9.0
    • tifffile>=2024.2.12
    • torch>=2.3.1
    • torchvision>=0.18.1
    • scikit-image>=0.22.0
    • qtpy>=2.4.1
    • pillow>=10.3.0
    • scipy>=1.3.0
    • timm>=1.0.7
    • pandas>=2.2.2
    • superqt>=0.6.3
    • btrack>=0.6.5
    • seaborn>=0.13.2
    • openpyxl>=3.1.4
    • joblib>=1.0
    • scikit-learn>=0.22
    • cython<3,>=0.27
    
                                     
    
                                 
    
                             
    
@@ -327,7 +327,7 @@ 
    Intepreting Results
    
                                                 
    
                                                 
      
-                                                    
    • 0.0.7
      • 
+                                                    
    • 0.0.8
      • 
                                                 
    
                                             
                                         
@@ -415,7 +415,7 @@ 
    Intepreting Results
    
                                             
    
                                                 
    Python versions
                                                     supported:
    
-                                                    
+                                                    
      
                                             
      
                                         
                                         
      
@@ -434,7 +434,7 @@ 
      Intepreting Results
      
                                             
      
                                                 
      
                                                     Requirements:
      
-                                                    
      • napari[all] >=0.4.19
      • numpy >=1.26.4
      • opencv-python >=4.9.0
      • tifffile >=2024.2.12
      • torch >=2.3.0
      • torchvision >=0.18.0
      • scikit-image >=0.22.0
      • qtpy >=2.4.1
      • pillow >=10.3.0
      • scipy >=1.3.0
      • timm >=1.0.7
      
+                                                    
      • napari[all]>=0.4.19
      • numpy==1.26.4
      • opencv-python>=4.9.0
      • tifffile>=2024.2.12
      • torch>=2.3.1
      • torchvision>=0.18.1
      • scikit-image>=0.22.0
      • qtpy>=2.4.1
      • pillow>=10.3.0
      • scipy>=1.3.0
      • timm>=1.0.7
      • pandas>=2.2.2
      • superqt>=0.6.3
      • btrack>=0.6.5
      • seaborn>=0.13.2
      • openpyxl>=3.1.4
      • joblib>=1.0
      • scikit-learn>=0.22
      • cython<3,>=0.27
      
                                             
      
                                         
      
                                     
diff --git a/plugins/cellfinder.html b/plugins/cellfinder.html
index 09997a1..25065b4 100644
--- a/plugins/cellfinder.html
+++ b/plugins/cellfinder.html
@@ -90,7 +90,7 @@
                                     
      
                                         
      Version:
      
                                         
        
-                                            
      • 1.3.2
        • 
+                                            
      • 1.3.3
        • 
                                         
      
                                     
      
                                 
@@ -172,7 +172,7 @@
                                 
      
                                     
      
                                         
      Requirements:
      
-                                        
      • brainglobe-utils>=0.5.0
      • brainglobe-napari-io>=0.3.4
      • dask[array]
      • fancylog>=0.0.7
      • natsort
      • numba
      • numpy<2
      • scikit-image
      • scikit-learn
      • keras>=3.0.0
      • torch>=2.1.0
      • tifffile
      • tqdm
      • black; extra == "dev"
      • pre-commit; extra == "dev"
      • pyinstrument; extra == "dev"
      • pytest-cov; extra == "dev"
      • pytest-mock; extra == "dev"
      • pytest-qt; extra == "dev"
      • pytest-timeout; extra == "dev"
      • pytest; extra == "dev"
      • tox; extra == "dev"
      • brainglobe-napari-io; extra == "napari"
      • magicgui; extra == "napari"
      • napari-ndtiffs; extra == "napari"
      • napari-plugin-engine>=0.1.4; extra == "napari"
      • napari[pyqt5]; extra == "napari"
      • pooch>=1; extra == "napari"
      • qtpy; extra == "napari"
      
+                                        
      • brainglobe-utils>=0.5.0
      • brainglobe-napari-io>=0.3.4
      • dask[array]
      • fancylog>=0.0.7
      • natsort
      • numba
      • numpy
      • scikit-image
      • scikit-learn
      • keras==3.5.0
      • torch>=2.1.0
      • tifffile
      • tqdm
      • black; extra == "dev"
      • pre-commit; extra == "dev"
      • pyinstrument; extra == "dev"
      • pytest-cov; extra == "dev"
      • pytest-mock; extra == "dev"
      • pytest-qt; extra == "dev"
      • pytest-timeout; extra == "dev"
      • pytest; extra == "dev"
      • tox; extra == "dev"
      • brainglobe-napari-io; extra == "napari"
      • magicgui; extra == "napari"
      • napari-ndtiffs; extra == "napari"
      • napari-plugin-engine>=0.1.4; extra == "napari"
      • napari[pyqt5]; extra == "napari"
      • pooch>=1; extra == "napari"
      • qtpy; extra == "napari"
      
                                     
      
                                 
      
                             
@@ -310,7 +310,7 @@ 
      Citation
      
                                                 
      
                                                 
        
-                                                    
      • 1.3.2
        • 
+                                                    
      • 1.3.3
        • 
                                                 
      
                                             
                                         
@@ -417,7 +417,7 @@ 
      Citation
      
                                             
      
                                                 
      
                                                     Requirements:
      
-                                                    
      • brainglobe-utils>=0.5.0
      • brainglobe-napari-io>=0.3.4
      • dask[array]
      • fancylog>=0.0.7
      • natsort
      • numba
      • numpy<2
      • scikit-image
      • scikit-learn
      • keras>=3.0.0
      • torch>=2.1.0
      • tifffile
      • tqdm
      • black; extra == "dev"
      • pre-commit; extra == "dev"
      • pyinstrument; extra == "dev"
      • pytest-cov; extra == "dev"
      • pytest-mock; extra == "dev"
      • pytest-qt; extra == "dev"
      • pytest-timeout; extra == "dev"
      • pytest; extra == "dev"
      • tox; extra == "dev"
      • brainglobe-napari-io; extra == "napari"
      • magicgui; extra == "napari"
      • napari-ndtiffs; extra == "napari"
      • napari-plugin-engine>=0.1.4; extra == "napari"
      • napari[pyqt5]; extra == "napari"
      • pooch>=1; extra == "napari"
      • qtpy; extra == "napari"
      
+                                                    
      • brainglobe-utils>=0.5.0
      • brainglobe-napari-io>=0.3.4
      • dask[array]
      • fancylog>=0.0.7
      • natsort
      • numba
      • numpy
      • scikit-image
      • scikit-learn
      • keras==3.5.0
      • torch>=2.1.0
      • tifffile
      • tqdm
      • black; extra == "dev"
      • pre-commit; extra == "dev"
      • pyinstrument; extra == "dev"
      • pytest-cov; extra == "dev"
      • pytest-mock; extra == "dev"
      • pytest-qt; extra == "dev"
      • pytest-timeout; extra == "dev"
      • pytest; extra == "dev"
      • tox; extra == "dev"
      • brainglobe-napari-io; extra == "napari"
      • magicgui; extra == "napari"
      • napari-ndtiffs; extra == "napari"
      • napari-plugin-engine>=0.1.4; extra == "napari"
      • napari[pyqt5]; extra == "napari"
      • pooch>=1; extra == "napari"
      • qtpy; extra == "napari"
      
                                             
      
                                         
                                     
diff --git a/plugins/cellpose-counter.html b/plugins/cellpose-counter.html
new file mode 100644
index 0000000..05226e3
--- /dev/null
+++ b/plugins/cellpose-counter.html
@@ -0,0 +1,646 @@
+
+
+
+
+
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    CellPose Counter - napari Plugin - Nicolas Buitrago
+
+    
+    
+    
+    
+    
+    
+        
+        
+        
+    
+
+
+
+
+    
      
+        
      
+            
      
+            
      
+            
      
+            
      
+                
+                
      
+                    
+                
      
+            
      
+            
      
+                
      
+                    
      
+                        
+                        
+                        
      
+                                
      
+                                    
      CellPose Counter
      
+                                
      
+
+                                
+   
      
+        
+        PyPI 
+    
+    
      
+                                                                
+                                
      
+                                    
      Cell/nuclei counter using cellpose models
      
+                                
      
+                                
        
+                                    
      • 
+                                        Nicolas Buitrago
+                                    
        •                               
+                            
      
+                            
      View
+                                    project data
      
+                            
      
+                                
      
+                                    
      
+                                        
      
+                                            
      
+                                            
      
+                                        
      
+                                    
      
+                                
      
+                                
      
+                                
      
+                                
      
+                                    
      
+
+                                        
+        
+        
      License BSD-3
+PyPI
+Python Version
+tests
+codecov
+napari hub
      
+
      A Napari plugin for cell/nuclei counting from a region or interest using
+cellpose models.
      
+
      
+
      Installation
      
+
      Option 1: Install in Napari directly under the plugins tab and select
+cellpose-counter.
      
+
      Option 2: via pip (or pip alternatives like
+uv):
      
+
      Below is a minimally working example of setting up a new virtual environment and
+installing the counter module with uv on Unix based systems.
      
+
      ```bash
+uv venv # create virtual environment in .venv
+source .venv/bin/activate
      
+
      uv pip install "napari[all]" cellpose-counter
+```
      
+
      GPU Acceleration
      
+
      To enable GPU acceleration, you will need a CUDA capable GPU along with the
+CUDA toolkit and cudNN library.
      
+
      For instructions on installing cuda toolkit and cudNN, see:
      
+
        
+
      1. cuda toolkit installation for Linux
        2. 
+
      2. cudNN installation for Linux
        3. 
+
      
+
      Once these are installed, update the pytorch package by first uninstalling torch
+(if already instsalled).
      
+
      bash
+uv pip uninstall torch
      
+
      Then install a torch version that is compatible with your CUDA version. For example,
      
+
      bash
+uv pip install torch --index-url https://download.pytorch.org/whl/cu118
      
+
      After installation, you can verify in an interactive python console with:
      
+
      python3
+import torch
+torch.cuda.is_available()
      
+
      Usage
      
+
      To open Napari with the cellpose counter loaded, run napari -w cellpose-counter.
      
+
      A dock widget will be open on the right side of the Napari interface. There
+you can view options for restoring images (using the cellpose denoise module),
+and counting cells/nuclei in a region of interest (ROI).
      
+
      A few important notes:
      
+
        
+
      1. Images in TIFF or CZI file formats may be used.
        2. 
+
      2. Images must be grayscale or single channel. RGB images may be loaded, but
+should be split. You can do this by right clicking on the image and select
+split rgb or split stack.
        3. 
+
      3. ROIs can be drawn using the shape layer tools. Only a single ROI can be drawn
+per shape layer (otherwise only the first draw ROI will be used).
        4. 
+
      4. ROIs should be square or rectangular. You can draw ROIs as polygons or other
+shapes, but a bounding box will be made from these shapes anyway.
        5. 
+
      5. For long running processes such as image restoration or counting, it may seem
+like Napari is not doing anything. Notifications are shown in the viewer to
+display import information and a small activity indicator can be seen in the
+bottom right hand corner. If this indicator is spinning, then work is being done
+even if it doesn't look like it.
        6. 
+
      
+
      Updating
      
+
        
+
      1. 
+
        via Napari plugin manager. Select cellpose-counter plugin and update button.
        
+
        2. 
+
      2. 
+
        via pip (or uv, ..., etc.)
        
+
        3. 
+
      
+
      bash
+uv pip install cellpose-counter --upgrade
      
+
      Contributing
      
+
      All contributions are welcome. Please submit an issue for feedback or bugs.
      
+
      Citations
      
+
      This plugin is built on top of the Cellpose segmentation and denoising models.
+If you use this plugin, please cite the following paper:
      
+
      bitex
+@article{stringer2021cellpose,
+title={Cellpose: a generalist algorithm for cellular segmentation},
+author={Stringer, Carsen and Wang, Tim and Michaelos, Michalis and Pachitariu, Marius},
+journal={Nature Methods},
+volume={18},
+number={1},
+pages={100--106},
+year={2021},
+publisher={Nature Publishing Group}
+}
      
+
      License
      
+
      BSD-3
      
+        
+
+                                    
      
+                                
      
+                                
+
      
+                                
      
+                                    
      
+                                        
      
+                                            
      
+                                                
      Version:
+                                                
      
+                                                
        
+                                                    
      • 0.1.3
        • 
+                                                
      
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      Last
+                                                    updated:
      
+                                                
        
+                                                    
      • Not available
        • 
+                                                
      
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      First
+                                                    released:
      
+                                                
        
+                                                    
      • Not available
        • 
+                                                
      
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      License:
+                                                
      
+                                                
+                                            
      
+                                        
      
+                                    
      
+                                    
      
+                                    
      
+                                    
      
+                                        
      
+                                            
      
+                                                
      Supported
+                                                    data:
      
+                                                
        
+                                                    
      • Information
+                                                            not submitted
        • 
+                                                
      
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      Plugin
+                                                    type:
      
+                                                    
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      Open
+                                                    extension:
      
+                                                    
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      Save
+                                                    extension:
      
+                                                    
+                                            
      
+                                        
      
+                                    
      
+                                    
      
+                                    
      
+                                    
      
+                                        
+                                        
      
+                                            
      
+                                                
      Python versions
+                                                    supported:
      
+                                                    
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      Operating
+                                                    system:
      
+                                                
        
+                                                    
      • Information
+                                                            not submitted
        • 
+                                                
      
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      
+                                                    Requirements:
      
+                                                    
      • numpy
      • magicgui
      • qtpy
      • scikit-image
      • napari[all]>=0.5.4
      • cellpose>=3.1.0
      • accelerate>=1.1.1
      • napari-czifile2>=0.2.7
      • tox; extra == "testing"
      • pytest; extra == "testing"
      • pytest-cov; extra == "testing"
      • pytest-qt; extra == "testing"
      • napari; extra == "testing"
      • pyqt5; extra == "testing"
      
+                                            
      
+                                        
      
+                                    
      
+                                
      
+                                    
+
      
+                            
      
+                        
      
+                    
      
+                
      
+            
      
+            
      
+            
      
+                
      
+                    
+                            
+                        GitHub repo
+                        About napari hubFAQ link to napari hub
+
+                    
      
+                        
      
+                            Disclaimer: This experiment aims to replicate key functionalities of napari-hub 
+                            using minimal dynamic elements, including real-time search and daily content updates.
+                        
      
+                    
      
+                
      
+                The
+                    napari hub is a service of the Chan Zuckerberg
+                        Initiative in collaboration with napari.
+                        
+                 
+                
      
+                    
+                            Go to napari main website.
+                            
+                            
+                            
+                            
+                            
+                            
+                                
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                
+                                
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                
+                            
+                        
+                    
      
+                            
+                                
+                                
+                                
+                                
+                                
+                            
+                            
+                                
+                                    
+                                
+                            
+                        
+                
      
+            
      
+        
      
+    
+
diff --git a/plugins/cochlea-synapseg.html b/plugins/cochlea-synapseg.html
new file mode 100644
index 0000000..b98e4f0
--- /dev/null
+++ b/plugins/cochlea-synapseg.html
@@ -0,0 +1,623 @@
+
+
+
+
+
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    Cochlea SynapSeg - napari Plugin - Cayla Miller
+
+    
+    
+    
+    
+    
+    
+        
+        
+        
+    
+
+
+
+
+    
      
+        
      
+            
      
+            
      
+            
      
+            
      
+                
+                
      
+                    
+                
      
+            
      
+            
      
+                
      
+                    
      
+                        
+                        
+                        
      
+                                
      
+                                    
      Cochlea SynapSeg
      
+                                
      
+
+                                
+   
      
+        
+        PyPI 
+    
+    
      
+                                                                
+                                
      
+                                    
      A plugin to segment cochlear ribbon synapses automatically, as well as edit and adjust
      
+                                
      
+                                
        
+                                    
      • 
+                                        Cayla Miller
+                                    
        •                               
+                            
      
+                            
      View
+                                    project data
      
+                            
      
+                                
      
+                                    
      
+                                        
      
+                                            
      
+                                            
      
+                                        
      
+                                    
      
+                                
      
+                                
      
+                                
      
+                                
      
+                                    
      
+
+                                        
+        
+        
      License BSD-3
+PyPI
+Python Version
+tests
+codecov
+napari hub
      
+
      A plugin to segment cochlear ribbon synapses. 
      
+
      More is in the works, but for now it includes tools to more quickly generate ground truth ribbon segmentation (Plugins > SynapSeg - Ground Truth Widget).
      
+
      
+
      This napari plugin was generated with Cookiecutter using @napari's cookiecutter-napari-plugin template.
      
+
+
+
      Installation
      
+
      You can install cochlea-synapseg (receommended: in a new conda environment with up-to-date napari) via pip:
      
+
      python -m pip install cochlea-synapseg
+
      
+
      Usage
      
+
      After successfull installation, you can find the plugin next time you launch napari (Plugins > SynapSeg - Ground Truth Widget).
      
+
      The ground truth widget is divided into multiple sections, for "quick use", be sure to check the settings denoted with asterisks:
      
+
      Image Tools
      
+
      image_tools
      
+
      *1. Image Layer Selection - use the dropdown to select the name of your image layer (here, the layer that contains the ribbon stain)
      
+
      (First load a 3D image using one of napari's native readers, or using the Cochlea-Synapseg .zarr reader (reads a .zarr with '3d/raw' and '3d/labeled').)
      
+
      *2. Refresh Image Layer Selection - update the list of available image layers in #1
      
+
      3. Pixel size information - (in microns), used for some point readers to successfully convert real units to pixel coordinates. Can be left as 1 if this functionality is not needed.
      
+
      4. Split channels - splits multiple channels into separate image layers (useful for FIJI-saved .tif images)
      
+
      Points Tools & Points to Labels
      
+
      points_tools
      
+
      5. Points Layer Selection and Refresh - use the dropdown to select an existing points layer, use the refresh button to update the list (or skip to #8 if not loading in existing points)
      
+
      6. Real -> Pixel Units - if you've loaded some points were saved in real units, make sure the pixel size information above in #3 is correct, then click "real -> pixel units"
      
+
      7. Channel Adjustment - some points (like ImageJ/FIJI rois or CellCounter points), show up in the wrong z plane because their "slice" coordinates are a combination of both slice and channel info. If this happens, set the number of channels (in the original image, where the ROIs were created!), and then click "chan -> z convert". Z coordinates of the points layer will be divided by the number of channels specified. 
      
+
      *8. New Points Layer - if starting annotation from scratch, click to create a new points layer. #5 should automatically select this new layer. 
      
+
      *9. Rotate to XY and *10. Auto-adjust Z - these convenient functions allow you to quickly annotate points in Napari's 3D view. Simply click "Rotate to XY before adding new points. These points will now have the correct XY position but will have missing Z information. (Rotate out of XY to confirm.) Click "Auto-adjust z" and the z will automatically adjust to the brightest point. 
      
+
      11. Manually Edit Z - useful for overlapping points, can be used to manually edit the z position of ONLY selected points. Use the +/- arrow keys for single z steps type in a number to move a larger amount. 
      
+
      12. Snap too Max - will automatically adjust all points to their local max (search radius defined in pixels in Advanced Settings -> snap to max rad). Useful for adjusting quickly dropped points, but proceed with caution if you have close-together points. 
      
+
      *13. Points to Labels - the key functionality of the module, creates a label layer by performing a local segmentation on all points.
      
+
      14. Advanced Settings - adjust settings for the points to labels function to optimize local segmentation and watershed separation of points. 
      
+
      Labels Tools
      
+
      labels_tools
      
+
      15. Lables Layer Selection and Refresh - use the dropdown to select an existing labels layer, use the refresh button to update the list
      
+
      16. Make Labels Editable - zarrs and other file formats tend to load in as dask arrays, which don't allow editing. Checking this box will make the labels layer editable by converting to a numpy array (will load the layer into memory, so be careful if dealing with large images!). This will allow you to edit the labels layer with tools like the paintbrush and eraser. Automatically enables if merging or removing labels is requested (see #17 and #19)
      
+
      *17. Remove a Label - use the labels layer eyedropper tool to identify the ID of an unwanted label, then type in the box and click "Remove label"
      
+
      18. Max Label Display - shows the current maximum label ID. If you're painting labels by hand and need a new label ID, increment above this number. Use the refresh button to the right to get an up-to-date number if you've made changes to your label layer.
      
+
      *19. Merge labels - if you have an existing labels layer, and then create new labels (e.g. from the points to labels function), select the layer you'd like to merge into your existing labels layer (i.e. box 15 and 19a should be different from one another!), and then click "merge labels". This function will automatically ensure overlapping label IDs are not used. 
      
+
      20. Labels to Points - if wanted, you can take all your existing labels and convert them to a points layer based on their centroids. This may be helpful for quickly generating better labels using the points tools above. 
      
+
      Save to Zarr
      
+
      save_zarr
      
+
      Functionality to save to .zarr format. Saves image as '3d/raw' and labels as '3d/labeled'. Used for later auto-segmentation of ribbons (not live in this plugin yet, but coming soon!). 
      
+
      *21. File Path - the directory in which to save the zarr; use the folder icon to search for an existing directory
      
+
      *22. File Name - the zarr name to save to; use the magnifying glass icon to select an existing .zarr
      
+
      23. From Source - set the file path and name to where the image layer was loaded from. (Caution: if you loaded a zarr, this will result in the zarr being overwritten!)
      
+
      *24. Save 3D Only (recommended) - saves the image and labels layers (selected in #1 and #15) in the specified .zarr, as 3d/raw and 3d/labeled, respectively. A reader is included with this plugin for this format as well. 
      
+
      25. Save 2D and 3D - (not recommended) to be used in the future if 2D models are to be run on the data, saves both the 3D stacks as in 24, and then individual 2D slices for each z in 2d/raw/[z] and 2d/labeled/[z]
      
+
      Contributing
      
+
      Contributions are very welcome. Tests can be run with tox, please ensure
+the coverage at least stays the same before you submit a pull request.
      
+
      License
      
+
      Distributed under the terms of the BSD-3 license,
+"cochlea-synapseg" is free and open source software
      
+
      Issues
      
+
      If you encounter any problems, please [file an issue] along with a detailed description.
      
+        
+
+                                    
      
+                                
      
+                                
+
      
+                                
      
+                                    
      
+                                        
      
+                                            
      
+                                                
      Version:
+                                                
      
+                                                
        
+                                                    
      • 0.0.1
        • 
+                                                
      
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      Last
+                                                    updated:
      
+                                                
        
+                                                    
      • Not available
        • 
+                                                
      
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      First
+                                                    released:
      
+                                                
        
+                                                    
      • Not available
        • 
+                                                
      
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      License:
+                                                
      
+                                                
+                                            
      
+                                        
      
+                                    
      
+                                    
      
+                                    
      
+                                    
      
+                                        
      
+                                            
      
+                                                
      Supported
+                                                    data:
      
+                                                
        
+                                                    
      • Information
+                                                            not submitted
        • 
+                                                
      
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      Plugin
+                                                    type:
      
+                                                    
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      Open
+                                                    extension:
      
+                                                    
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      Save
+                                                    extension:
      
+                                                    
+                                            
      
+                                        
      
+                                    
      
+                                    
      
+                                    
      
+                                    
      
+                                        
+                                        
      
+                                            
      
+                                                
      Python versions
+                                                    supported:
      
+                                                    
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      Operating
+                                                    system:
      
+                                                
        
+                                                    
      • Information
+                                                            not submitted
        • 
+                                                
      
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      
+                                                    Requirements:
      
+                                                    
      • numpy
      • qtpy
      • scikit-image
      • scipy
      • zarr
      • tox; extra == "testing"
      • pytest; extra == "testing"
      • pytest-cov; extra == "testing"
      • pytest-qt; extra == "testing"
      • napari; extra == "testing"
      • pyqt5; extra == "testing"
      
+                                            
      
+                                        
      
+                                    
      
+                                
      
+                                    
+
      
+                            
      
+                        
      
+                    
      
+                
      
+            
      
+            
      
+            
      
+                
      
+                    
+                            
+                        GitHub repo
+                        About napari hubFAQ link to napari hub
+
+                    
      
+                        
      
+                            Disclaimer: This experiment aims to replicate key functionalities of napari-hub 
+                            using minimal dynamic elements, including real-time search and daily content updates.
+                        
      
+                    
      
+                
      
+                The
+                    napari hub is a service of the Chan Zuckerberg
+                        Initiative in collaboration with napari.
+                        
+                 
+                
      
+                    
+                            Go to napari main website.
+                            
+                            
+                            
+                            
+                            
+                            
+                                
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                
+                                
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                
+                            
+                        
+                    
      
+                            
+                                
+                                
+                                
+                                
+                                
+                            
+                            
+                                
+                                    
+                                
+                            
+                        
+                
      
+            
      
+        
      
+    
+
diff --git a/plugins/cut-detector.html b/plugins/cut-detector.html
index dd5aa0f..0d3ac0f 100644
--- a/plugins/cut-detector.html
+++ b/plugins/cut-detector.html
@@ -90,7 +90,7 @@
                                     
      
                                         
      Version:
      
                                         
        
-                                            
      • 1.2.1
        • 
+                                            
      • 1.4.0
        • 
                                         
      
                                     
      
                                 
@@ -255,7 +255,7 @@ 
      Automatic Cut Detector
      
 codecov
 napari hub
      
 
      Automatic micro-tubule cut detector.
      
-
      https://github.com/user-attachments/assets/89d63336-729c-43c1-8fa3-43a4ec4cfc87
      
+
      https://github.com/user-attachments/assets/356efbf6-d78a-44a0-ad94-de3de83f01ed
      
 
      
 
      This napari plugin was generated with Cookiecutter using @napari's cookiecutter-napari-plugin template.
      
 :
      
                                         
        
-                                            
      • 0.10.1
        • 
+                                            
      • 0.11.0
        • 
                                         
      
                                     
                                 
@@ -98,7 +98,7 @@
                                     
      
                                         
      Last updated:
      
                                         
        
-                                            
      • 2023-06-11
        • 
+                                            
      • 2024-10-29
        • 
                                         
      
                                     
      
                                 
@@ -160,7 +160,7 @@
                                 
      
                                     
      
                                         
      Python versions supported:
      
-                                        
+                                        
                                     
      
                                 
      
                                 
      
@@ -172,7 +172,7 @@
                                 
      
                                     
      
                                         
      Requirements:
      
-                                        
      • napari-plugin-engine (>=0.1.4)
      • npe2 (<0.7.0)
      • numpy (>=1.21.4)
      • napari-pyclesperanto-assistant
      • napari-skimage-regionprops
      • napari-animation
      • PlatyMatch
      • napari-plot-profile
      • napari-accelerated-pixel-and-object-classification
      • napari-brightness-contrast
      • napari-plugin-search
      • napari-segment-blobs-and-things-with-membranes
      • napari-simpleitk-image-processing
      • napari-folder-browser
      • napari-crop
      • napari-clusters-plotter (>=0.7.1)
      • napari-tabu
      • napari-workflow-optimizer
      • napari-workflow-inspector
      • napari-curtain
      • napari-layer-details-display
      • napari
      • vispy
      • napari-mouse-controls
      • the-segmentation-game
      • napari-blob-detection
      • jupyterlab
      • napari-czifile2
      • napari-roi
      • pydantic (!=1.10.0)
      • napari-pystackreg
      • imageio (!=2.22.1)
      • redlionfish
      • jupyter-server (<2.0.0)
      • seaborn
      
+                                        
      • napari-plugin-engine>=0.1.4
      • npe2
      • numpy>=1.21.4
      • napari-assistant>=0.4.9
      • napari-pyclesperanto-assistant>=0.23.0
      • napari-skimage-regionprops
      • napari-animation
      • PlatyMatch
      • napari-plot-profile
      • napari-accelerated-pixel-and-object-classification
      • napari-brightness-contrast
      • napari-plugin-search
      • napari-segment-blobs-and-things-with-membranes
      • napari-simpleitk-image-processing
      • napari-stl-exporter
      • napari-folder-browser
      • napari-crop
      • napari-clusters-plotter>=0.7.1
      • napari-tabu
      • napari-workflow-optimizer
      • napari-workflow-inspector
      • napari-curtain
      • napari-layer-details-display
      • napari
      • vispy
      • napari-mouse-controls
      • the-segmentation-game
      • napari-blob-detection
      • jupyterlab
      • napari-czifile2
      • napari-roi
      • pydantic!=1.10.0
      • napari-pystackreg
      • imageio!=2.22.1
      • redlionfish
      • jupyter-server
      • seaborn
      
                                     
      
                                 
      
                             
      
@@ -321,6 +321,8 @@ 
      A bundle of napari plugins useful for 3D+t image processing
 
    • Quantification
      • 
 
    • skimage-regionprops
      • 
 
    • Quantification
      • 
+
    • stl-exporter
      • 
+
    • File input/output
      • 
 
    • tabu
      • 
 
    • Interaction
      • 
 
    • the-segmentation-game
      • 
@@ -335,10 +337,8 @@ 
      A bundle of napari plugins useful for 3D+t image processing
 
      
 
      Installation
      
 
      You can install devbio-napari via conda/mamba. If you have never used conda before, please read this guide first.
      
-Start by installing mamba in your base environment:
      
-
      conda install mamba -c conda-forge
      
-
      Afterwards, create an environment using mamba.
      
-
      mamba create --name devbio-napari-env python=3.9 devbio-napari -c conda-forge -c pytorch
      
+Start by creating an environment using mamba.
      
+
      mamba create --name devbio-napari-env napari=0.4.19 python=3.9 devbio-napari pyqt -c conda-forge -c pytorch
      
 
      Afterwards, activate the environment like this:
      
 
      mamba activate devbio-napari-env
      
 
      Afterwards, run this command from the command line
      
@@ -395,7 +395,7 @@ 
      Issues
      
                                                 
      
                                                 
        
-                                                    
      • 0.10.1
        • 
+                                                    
      • 0.11.0
        • 
                                                 
      
                                             
                                         
@@ -405,7 +405,7 @@ 
      Issues
      
                                                     updated:
      
                                                 
        
-                                                    
      • 2023-06-11
        • 
+                                                    
      • 2024-10-29
        • 
                                                 
      
                                             
                                         
@@ -483,7 +483,7 @@ 
      Issues
      
                                             
      
                                                 
      Python versions
                                                     supported:
      
-                                                    
+                                                    
                                             
      
                                         
                                         
      
@@ -502,7 +502,7 @@ 
      Issues
      
                                             
      
                                                 
      
                                                     Requirements:
      
-                                                    
      • napari-plugin-engine (>=0.1.4)
      • npe2 (<0.7.0)
      • numpy (>=1.21.4)
      • napari-pyclesperanto-assistant
      • napari-skimage-regionprops
      • napari-animation
      • PlatyMatch
      • napari-plot-profile
      • napari-accelerated-pixel-and-object-classification
      • napari-brightness-contrast
      • napari-plugin-search
      • napari-segment-blobs-and-things-with-membranes
      • napari-simpleitk-image-processing
      • napari-folder-browser
      • napari-crop
      • napari-clusters-plotter (>=0.7.1)
      • napari-tabu
      • napari-workflow-optimizer
      • napari-workflow-inspector
      • napari-curtain
      • napari-layer-details-display
      • napari
      • vispy
      • napari-mouse-controls
      • the-segmentation-game
      • napari-blob-detection
      • jupyterlab
      • napari-czifile2
      • napari-roi
      • pydantic (!=1.10.0)
      • napari-pystackreg
      • imageio (!=2.22.1)
      • redlionfish
      • jupyter-server (<2.0.0)
      • seaborn
      
+                                                    
      • napari-plugin-engine>=0.1.4
      • npe2
      • numpy>=1.21.4
      • napari-assistant>=0.4.9
      • napari-pyclesperanto-assistant>=0.23.0
      • napari-skimage-regionprops
      • napari-animation
      • PlatyMatch
      • napari-plot-profile
      • napari-accelerated-pixel-and-object-classification
      • napari-brightness-contrast
      • napari-plugin-search
      • napari-segment-blobs-and-things-with-membranes
      • napari-simpleitk-image-processing
      • napari-stl-exporter
      • napari-folder-browser
      • napari-crop
      • napari-clusters-plotter>=0.7.1
      • napari-tabu
      • napari-workflow-optimizer
      • napari-workflow-inspector
      • napari-curtain
      • napari-layer-details-display
      • napari
      • vispy
      • napari-mouse-controls
      • the-segmentation-game
      • napari-blob-detection
      • jupyterlab
      • napari-czifile2
      • napari-roi
      • pydantic!=1.10.0
      • napari-pystackreg
      • imageio!=2.22.1
      • redlionfish
      • jupyter-server
      • seaborn
      
                                             
      
                                         
      
                                     
diff --git a/plugins/epicure.html b/plugins/epicure.html
new file mode 100644
index 0000000..7221327
--- /dev/null
+++ b/plugins/epicure.html
@@ -0,0 +1,519 @@
+
+
+
+
+
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    EpiCure - napari Plugin - Gaëlle Letort
+
+    
+    
+    
+    
+    
+    
+        
+        
+        
+    
+
+
+
+
+    
      
+        
      
+            
      
+            
      
+            
      
+            
      
+                
+                
      
+                    
+                
      
+            
      
+            
      
+                
      
+                    
      
+                        
+                        
+                        
      
+                                
      
+                                    
      EpiCure
      
+                                
      
+
+                                
+   
      
+        
+        PyPI 
+    
+    
      
+                                                                
+                                
      
+                                    
      Napari plugin to manually correct epithelia segmentation in movies
      
+                                
      
+                                
        
+                                    
      • 
+                                        Gaëlle Letort
+                                    
        •                               
+                            
      
+                            
      View
+                                    project data
      
+                            
      
+                                
      
+                                    
      
+                                        
      
+                                            
      
+                                            
      
+                                        
      
+                                    
      
+                                
      
+                                
      
+                                
      
+                                
      
+                                    
      
+
+                                        
+        
+        
      License BSD-3
+PyPI
+Python Version
+napari hub
      
+
      Napari plugin to manually correct epithelia segmentation in movies
      
+
      
+
      Documentation in the wiki
      
+
      
+
      Installation
      
+
      Install plugin
      
+
      To install EpiCure on a fresh python virtual environment, type inside the environement:
+pip install epicure 
      
+
      Then launch Napari, and the plugin should be visible in the Plugins list.
      
+
      If you already have an environment with Napari installed, you can also install it directly in Napari>Plugins>Install/Uninstall plugins
      
+
      Install code
      
+
      To have the code to be able to modify it, clone this repository. You can use pip install -e . so that everytime you update the code, the plugin will be updated. 
      
+
      Usage
      
+
      Refer to the wiki for documentation of the different steps possible in the pipeline.
      
+
      This napari plugin was initialized with Cookiecutter using [@napari]'s [cookiecutter-napari-plugin] template.
      
+        
+
+                                    
      
+                                
      
+                                
+
      
+                                
      
+                                    
      
+                                        
      
+                                            
      
+                                                
      Version:
+                                                
      
+                                                
        
+                                                    
      • 0.1.3
        • 
+                                                
      
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      Last
+                                                    updated:
      
+                                                
        
+                                                    
      • Not available
        • 
+                                                
      
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      First
+                                                    released:
      
+                                                
        
+                                                    
      • Not available
        • 
+                                                
      
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      License:
+                                                
      
+                                                
+                                            
      
+                                        
      
+                                    
      
+                                    
      
+                                    
      
+                                    
      
+                                        
      
+                                            
      
+                                                
      Supported
+                                                    data:
      
+                                                
        
+                                                    
      • Information
+                                                            not submitted
        • 
+                                                
      
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      Plugin
+                                                    type:
      
+                                                    
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      Open
+                                                    extension:
      
+                                                    
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      Save
+                                                    extension:
      
+                                                    
+                                            
      
+                                        
      
+                                    
      
+                                    
      
+                                    
      
+                                    
      
+                                        
+                                        
      
+                                            
      
+                                                
      Python versions
+                                                    supported:
      
+                                                    
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      Operating
+                                                    system:
      
+                                                
        
+                                                    
      • Information
+                                                            not submitted
        • 
+                                                
      
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      
+                                                    Requirements:
      
+                                                    
      • napari<=0.4.19
      • numpy
      • magicgui
      • qtpy
      • scikit-image
      • opencv-python-headless
      • roifile
      • xlsxwriter
      • laptrack
      • matplotlib
      • imagecodecs
      • edt
      • tox; extra == "testing"
      • pytest; extra == "testing"
      • pytest-cov; extra == "testing"
      • pytest-qt; extra == "testing"
      • napari; extra == "testing"
      • pyqt5; extra == "testing"
      
+                                            
      
+                                        
      
+                                    
      
+                                
      
+                                    
+
      
+                            
      
+                        
      
+                    
      
+                
      
+            
      
+            
      
+            
      
+                
      
+                    
+                            
+                        GitHub repo
+                        About napari hubFAQ link to napari hub
+
+                    
      
+                        
      
+                            Disclaimer: This experiment aims to replicate key functionalities of napari-hub 
+                            using minimal dynamic elements, including real-time search and daily content updates.
+                        
      
+                    
      
+                
      
+                The
+                    napari hub is a service of the Chan Zuckerberg
+                        Initiative in collaboration with napari.
+                        
+                 
+                
      
+                    
+                            Go to napari main website.
+                            
+                            
+                            
+                            
+                            
+                            
+                                
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                
+                                
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                
+                            
+                        
+                    
      
+                            
+                                
+                                
+                                
+                                
+                                
+                            
+                            
+                                
+                                    
+                                
+                            
+                        
+                
      
+            
      
+        
      
+    
+
diff --git a/plugins/featureforest.html b/plugins/featureforest.html
new file mode 100644
index 0000000..cd6462a
--- /dev/null
+++ b/plugins/featureforest.html
@@ -0,0 +1,557 @@
+
+
+
+
+
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    Feature Forest - napari Plugin - Mehdi Seifi, Vera Galinova
+
+    
+    
+    
+    
+    
+    
+        
+        
+        
+    
+
+
+
+
+    
      
+        
      
+            
      
+            
      
+            
      
+            
      
+                
+                
      
+                    
+                
      
+            
      
+            
      
+                
      
+                    
      
+                        
+                        
+                        
      
+                                
      
+                                    
      Feature Forest
      
+                                
      
+
+                                
+   
      
+        
+        PyPI 
+    
+    
      
+                                                                
+                                
      
+                                    
      A napari plugin for segmentation using vision transformer features
      
+                                
      
+                                
        
+                                    
      • 
+                                        Mehdi Seifi, Vera Galinova
+                                    
        •                               
+                            
      
+                            
      View
+                                    project data
      
+                            
      
+                                
      
+                                    
      
+                                        
      
+                                            
      
+                                            
      
+                                        
      
+                                    
      
+                                
      
+                                
      
+                                
      
+                                
      
+                                    
      
+
+                                        
+        
+        
      License BSD-3
+PyPI
+Python Version
+tests
+codecov
+napari hub
      
+
      A napari plugin for making image annotation using feature space of vision transformers and random forest classifier.
      
+We developed a napari plugin to train a Random Forest model using extracted features of vision foundation models and just a few scribble labels provided by the user as input. This approach can do the segmentation of desired objects almost as well as manual segmentations but in a much shorter time with less manual effort.
      
+
      
+
      Documentation
      
+
      The plugin documentation is here.
      
+
      Installation
      
+
      To install this plugin you need to use conda or mamba to create a environment and install the requirements. Use the commands below to create the environment and install the plugin:
+```bash
      
+
      for GPU
      
+
      conda env create -f ./env_gpu.yml
+bash
      
+
      if you don't have a GPU
      
+
      conda env create -f ./env_cpu.yml
+```
      
+
      Note: You need to install sam-2 which can be install easily using conda. To install sam-2 using pip please refer to the official sam-2 repository.
      
+
      Requirements
      
+
        
+
      • python >= 3.10
        • 
+
      • numpy==1.24.4
        • 
+
      • opencv-python
        • 
+
      • scikit-learn
        • 
+
      • scikit-image
        • 
+
      • matplotlib
        • 
+
      • pyqt
        • 
+
      • magicgui
        • 
+
      • qtpy
        • 
+
      • napari
        • 
+
      • h5py
        • 
+
      • pytorch=2.3.1
        • 
+
      • torchvision=0.18.1
        • 
+
      • timm=1.0.9
        • 
+
      • pynrrd
        • 
+
      • segment-anything
        • 
+
      • sam-2
        • 
+
      
+
      If you want to install the plugin manually using GPU, please follow the pytorch installation instruction here.
      
+For detailed napari installation see here.  
      
+
      Installing The Plugin
      
+
      If you use the provided conda environment yaml files, the plugin will be installed automatically. But in case you already have the environment setup, 
+you can just install the plugin. First clone the repository:
+bash
+git clone https://github.com/juglab/featureforest
+Then run the following commands:
+bash
+cd ./featureforest
+pip install .
      
+
      License
      
+
      Distributed under the terms of the BSD-3 license,
+"featureforest" is free and open source software
      
+
      Issues
      
+
      If you encounter any problems, please [file an issue] along with a detailed description.
      
+        
+
+                                    
      
+                                
      
+                                
+
      
+                                
      
+                                    
      
+                                        
      
+                                            
      
+                                                
      Version:
+                                                
      
+                                                
        
+                                                    
      • 0.0.6
        • 
+                                                
      
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      Last
+                                                    updated:
      
+                                                
        
+                                                    
      • Not available
        • 
+                                                
      
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      First
+                                                    released:
      
+                                                
        
+                                                    
      • Not available
        • 
+                                                
      
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      License:
+                                                
      
+                                                
+                                            
      
+                                        
      
+                                    
      
+                                    
      
+                                    
      
+                                    
      
+                                        
      
+                                            
      
+                                                
      Supported
+                                                    data:
      
+                                                
        
+                                                    
      • Information
+                                                            not submitted
        • 
+                                                
      
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      Plugin
+                                                    type:
      
+                                                    
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      Open
+                                                    extension:
      
+                                                    
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      Save
+                                                    extension:
      
+                                                    
+                                            
      
+                                        
      
+                                    
      
+                                    
      
+                                    
      
+                                    
      
+                                        
+                                        
      
+                                            
      
+                                                
      Python versions
+                                                    supported:
      
+                                                    
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      Operating
+                                                    system:
      
+                                                
        
+                                                    
      • Information
+                                                            not submitted
        • 
+                                                
      
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      
+                                                    Requirements:
      
+                                                    
      • h5py
      • iopath>=0.1.10
      • magicgui
      • matplotlib
      • napari
      • numpy==1.24.4
      • opencv-python
      • pooch
      • pynrrd
      • pyqt5
      • qtpy
      • scikit-image
      • scikit-learn
      • segment-anything-py
      • timm==1.0.9
      • torch==2.3.1
      • torchvision==0.18.1
      • pre-commit; extra == 'dev'
      • pytest; extra == 'dev'
      • pytest-cov; extra == 'dev'
      • sybil; extra == 'dev'
      • tox; extra == 'dev'
      • tox-gh-actions; extra == 'dev'
      
+                                            
      
+                                        
      
+                                    
      
+                                
      
+                                    
+
      
+                            
      
+                        
      
+                    
      
+                
      
+            
      
+            
      
+            
      
+                
      
+                    
+                            
+                        GitHub repo
+                        About napari hubFAQ link to napari hub
+
+                    
      
+                        
      
+                            Disclaimer: This experiment aims to replicate key functionalities of napari-hub 
+                            using minimal dynamic elements, including real-time search and daily content updates.
+                        
      
+                    
      
+                
      
+                The
+                    napari hub is a service of the Chan Zuckerberg
+                        Initiative in collaboration with napari.
+                        
+                 
+                
      
+                    
+                            Go to napari main website.
+                            
+                            
+                            
+                            
+                            
+                            
+                                
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                
+                                
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                
+                            
+                        
+                    
      
+                            
+                                
+                                
+                                
+                                
+                                
+                            
+                            
+                                
+                                    
+                                
+                            
+                        
+                
      
+            
      
+        
      
+    
+
diff --git a/plugins/fish-scan.html b/plugins/fish-scan.html
index 99166a8..0d44e1d 100644
--- a/plugins/fish-scan.html
+++ b/plugins/fish-scan.html
@@ -90,7 +90,7 @@
                                     
      
                                         
      Version:
      
                                         
        
-                                            
      • 1.0.9
        • 
+                                            
      • 1.1.0
        • 
                                         
      
                                     
      
                                 
@@ -372,7 +372,7 @@ 
      Issues
      
                                                 
      
                                                 
        
-                                                    
      • 1.0.9
        • 
+                                                    
      • 1.1.0
        • 
                                                 
      
                                             
                                         
diff --git a/plugins/microscope-napari.html b/plugins/microscope-napari.html
index c7bfd80..12debb0 100644
--- a/plugins/microscope-napari.html
+++ b/plugins/microscope-napari.html
@@ -90,7 +90,7 @@
                                     
      
                                         
      Version:
      
                                         
        
-                                            
      • 0.0.4
        • 
+                                            
      • 0.0.5
        • 
                                         
      
                                     
      
                                 
@@ -172,7 +172,7 @@
                                 
      
                                     
      
                                         
      Requirements:
      
-                                        
      • napari
      • napari-plugin-engine >=0.1.4
      • cellpose >0.6.3
      • imagecodecs
      • sphinx >=3.0 ; extra == 'docs'
      • sphinxcontrib-apidoc ; extra == 'docs'
      • sphinx-rtd-theme ; extra == 'docs'
      • sphinx-prompt ; extra == 'docs'
      • sphinx-autodoc-typehints ; extra == 'docs'
      • tox ; extra == 'testing'
      • pytest ; extra == 'testing'
      • pytest-cov ; extra == 'testing'
      • pytest-qt ; extra == 'testing'
      • napari ; extra == 'testing'
      • pyqt5 ; extra == 'testing'
      
+                                        
      • napari
      • napari-plugin-engine>=0.1.4
      • cellpose>0.6.3
      • imagecodecs
      • sphinx>=3.0; extra == "docs"
      • sphinxcontrib-apidoc; extra == "docs"
      • sphinx-rtd-theme; extra == "docs"
      • sphinx-prompt; extra == "docs"
      • sphinx-autodoc-typehints; extra == "docs"
      • tox; extra == "testing"
      • pytest; extra == "testing"
      • pytest-cov; extra == "testing"
      • pytest-qt; extra == "testing"
      • napari; extra == "testing"
      • pyqt5; extra == "testing"
      
                                     
      
                                 
      
                             
@@ -264,22 +264,22 @@ 
      Usage
      
 
      Cellpose
      
 
      Images can be segmented with custom and built-in cellpose models.
      
 
      kép
      
-
      For further information make sure to check out cellpose and cellpose-napari plugin.
      
+
      For further information make sure to check out cellpose and cellpose-napari plugin.
      
 
      Cell counting
      
 
      Cell counts in pictures can be obtained with cellpose models and average intensity regression models.
 Any number of napari image layers can be selected to be evaluated.
      
 
      Cellpose model
      
 
      Without enabling regression model counting the default used method is cellpose segmenting.
 The lower settings are for cellpose only.
      
-
      Cell outlines can be output to verify the accuracy of results.
      
+
      Cell masks can be output to verify the accuracy of results.
      
 
      Our custom cellpose models can be accessed there.
      
-
      kép
      
+
      kép
      
 
      Average intensity regression model
      
 
      For these models we should enable the regression model counting feature.
-The lower settings are irrelevant now, cell outlines will not be output.
+The lower settings are irrelevant now, cell masks will not be output.
 It is only used for counting cells in images.
      
 
      Our regression models can be accessed there.
      
-
      kép
      
+
      kép
      
         
 
                                     
@@ -295,7 +295,7 @@ 
      Average intensity regression model
      
                                                 
      
                                                 
        
-                                                    
      • 0.0.4
        • 
+                                                    
      • 0.0.5
        • 
                                                 
      
                                             
                                         
@@ -402,7 +402,7 @@ 
      Average intensity regression model
      
                                             
      
                                                 
      
                                                     Requirements:
      
-                                                    
      • napari
      • napari-plugin-engine >=0.1.4
      • cellpose >0.6.3
      • imagecodecs
      • sphinx >=3.0 ; extra == 'docs'
      • sphinxcontrib-apidoc ; extra == 'docs'
      • sphinx-rtd-theme ; extra == 'docs'
      • sphinx-prompt ; extra == 'docs'
      • sphinx-autodoc-typehints ; extra == 'docs'
      • tox ; extra == 'testing'
      • pytest ; extra == 'testing'
      • pytest-cov ; extra == 'testing'
      • pytest-qt ; extra == 'testing'
      • napari ; extra == 'testing'
      • pyqt5 ; extra == 'testing'
      
+                                                    
      • napari
      • napari-plugin-engine>=0.1.4
      • cellpose>0.6.3
      • imagecodecs
      • sphinx>=3.0; extra == "docs"
      • sphinxcontrib-apidoc; extra == "docs"
      • sphinx-rtd-theme; extra == "docs"
      • sphinx-prompt; extra == "docs"
      • sphinx-autodoc-typehints; extra == "docs"
      • tox; extra == "testing"
      • pytest; extra == "testing"
      • pytest-cov; extra == "testing"
      • pytest-qt; extra == "testing"
      • napari; extra == "testing"
      • pyqt5; extra == "testing"
      
                                             
      
                                         
                                     
diff --git a/plugins/midi-app-controller.html b/plugins/midi-app-controller.html
index 70911a8..35fab43 100644
--- a/plugins/midi-app-controller.html
+++ b/plugins/midi-app-controller.html
@@ -90,7 +90,7 @@
                                     
      
                                         
      Version:
      
                                         
        
-                                            
      • 0.0.12
        • 
+                                            
      • 0.1.1
        • 
                                         
      
                                     
      
                                 
@@ -172,7 +172,7 @@
                                 
      
                                     
      
                                         
      Requirements:
      
-                                        
      • napari[all] >=0.4.19
      • python-rtmidi >=1.5.8
      • pyyaml >=6.0.1
      • pydantic >=2.7.1
      • appdirs >=1.4.4
      • qtpy >=2.4.1
      • superqt >=0.6.5
      • midi-app-controller[testing] ; extra == 'dev'
      • pre-commit >=3.7.0 ; extra == 'dev'
      • pytest >=8.2.0 ; extra == 'testing'
      • pytest-cov >=5.0.0 ; extra == 'testing'
      • pytest-qt >=4.0.2 ; extra == 'testing'
      
+                                        
      • napari>=0.4.19
      • python-rtmidi>=1.5.8
      • pyyaml>=6.0.1
      • pydantic>=2.7.1
      • appdirs>=1.4.4
      • qtpy>=2.4.1
      • superqt>=0.6.5
      • midi-app-controller[testing]; extra == "dev"
      • pre-commit>=3.7.0; extra == "dev"
      • pytest>=8.2.0; extra == "testing"
      • pytest-cov>=5.0.0; extra == "testing"
      • pytest-qt>=4.0.2; extra == "testing"
      • napari[all]; extra == "testing"
      • flexparser!=0.4.0; extra == "testing"
      
                                     
      
                                 
      
                             
@@ -315,7 +315,7 @@ 
      Using pre-commit
      
                                                 
      
                                                 
        
-                                                    
      • 0.0.12
        • 
+                                                    
      • 0.1.1
        • 
                                                 
      
                                             
                                         
@@ -422,7 +422,7 @@ 
      Using pre-commit
      
                                             
      
                                                 
      
                                                     Requirements:
      
-                                                    
      • napari[all] >=0.4.19
      • python-rtmidi >=1.5.8
      • pyyaml >=6.0.1
      • pydantic >=2.7.1
      • appdirs >=1.4.4
      • qtpy >=2.4.1
      • superqt >=0.6.5
      • midi-app-controller[testing] ; extra == 'dev'
      • pre-commit >=3.7.0 ; extra == 'dev'
      • pytest >=8.2.0 ; extra == 'testing'
      • pytest-cov >=5.0.0 ; extra == 'testing'
      • pytest-qt >=4.0.2 ; extra == 'testing'
      
+                                                    
      • napari>=0.4.19
      • python-rtmidi>=1.5.8
      • pyyaml>=6.0.1
      • pydantic>=2.7.1
      • appdirs>=1.4.4
      • qtpy>=2.4.1
      • superqt>=0.6.5
      • midi-app-controller[testing]; extra == "dev"
      • pre-commit>=3.7.0; extra == "dev"
      • pytest>=8.2.0; extra == "testing"
      • pytest-cov>=5.0.0; extra == "testing"
      • pytest-qt>=4.0.2; extra == "testing"
      • napari[all]; extra == "testing"
      • flexparser!=0.4.0; extra == "testing"
      
                                             
      
                                         
                                     
diff --git a/plugins/mmv_h4cells.html b/plugins/mmv_h4cells.html
new file mode 100644
index 0000000..7213f16
--- /dev/null
+++ b/plugins/mmv_h4cells.html
@@ -0,0 +1,473 @@
+
+
+
+
+
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    Cell Analyzer - napari Plugin - Lennart Kowitz
+
+    
+    
+    
+    
+    
+    
+        
+        
+        
+    
+
+
+
+
+    
      
+        
      
+            
      
+            
      
+            
      
+            
      
+                
+                
      
+                    
+                
      
+            
      
+            
      
+                
      
+                    
      
+                        
+                        
+                        
      
+                                
      
+                                    
      Cell Analyzer
      
+                                
      
+
+                                
+   
      
+        
+        PyPI 
+    
+    
      
+                                                                
+                                
      
+                                    
      A simple plugin to help with analyzing cells in napari
      
+                                
      
+                                
        
+                                    
      • 
+                                        Lennart Kowitz
+                                    
        •                               
+                            
      
+                            
      View
+                                    project data
      
+                            
      
+                                
      
+                                    
      
+                                        
      
+                                            
      
+                                            
      
+                                        
      
+                                    
      
+                                
      
+                                
      
+                                
      
+                                
      
+                                    
      
+
+                                        Not available
+
+                                    
      
+                                
      
+                                
+
      
+                                
      
+                                    
      
+                                        
      
+                                            
      
+                                                
      Version:
+                                                
      
+                                                
        
+                                                    
      • 1.1.0
        • 
+                                                
      
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      Last
+                                                    updated:
      
+                                                
        
+                                                    
      • Not available
        • 
+                                                
      
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      First
+                                                    released:
      
+                                                
        
+                                                    
      • Not available
        • 
+                                                
      
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      License:
+                                                
      
+                                                
+                                            
      
+                                        
      
+                                    
      
+                                    
      
+                                    
      
+                                    
      
+                                        
      
+                                            
      
+                                                
      Supported
+                                                    data:
      
+                                                
        
+                                                    
      • Information
+                                                            not submitted
        • 
+                                                
      
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      Plugin
+                                                    type:
      
+                                                    
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      Open
+                                                    extension:
      
+                                                    
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      Save
+                                                    extension:
      
+                                                    
+                                            
      
+                                        
      
+                                    
      
+                                    
      
+                                    
      
+                                    
      
+                                        
+                                        
      
+                                            
      
+                                                
      Python versions
+                                                    supported:
      
+                                                    
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      Operating
+                                                    system:
      
+                                                
        
+                                                    
      • Information
+                                                            not submitted
        • 
+                                                
      
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      
+                                                    Requirements:
      
+                                                    
+                                            
      
+                                        
      
+                                    
      
+                                
      
+                                    
+
      
+                            
      
+                        
      
+                    
      
+                
      
+            
      
+            
      
+            
      
+                
      
+                    
+                            
+                        GitHub repo
+                        About napari hubFAQ link to napari hub
+
+                    
      
+                        
      
+                            Disclaimer: This experiment aims to replicate key functionalities of napari-hub 
+                            using minimal dynamic elements, including real-time search and daily content updates.
+                        
      
+                    
      
+                
      
+                The
+                    napari hub is a service of the Chan Zuckerberg
+                        Initiative in collaboration with napari.
+                        
+                 
+                
      
+                    
+                            Go to napari main website.
+                            
+                            
+                            
+                            
+                            
+                            
+                                
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                
+                                
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                
+                            
+                        
+                    
      
+                            
+                                
+                                
+                                
+                                
+                                
+                            
+                            
+                                
+                                    
+                                
+                            
+                        
+                
      
+            
      
+        
      
+    
+
diff --git a/plugins/motile-plugin.html b/plugins/motile-plugin.html
index 22c9263..9b42fb2 100644
--- a/plugins/motile-plugin.html
+++ b/plugins/motile-plugin.html
@@ -90,7 +90,7 @@
                                     
      
                                         
      Version:
      
                                         
        
-                                            
      • 1.1.0
        • 
+                                            
      • 2.0.1
        • 
                                         
      
                                     
      
                                 
@@ -172,7 +172,7 @@
                                 
      
                                     
      
                                         
      Requirements:
      
-                                        
      • napari[all]
      • numpy
      • magicgui
      • qtpy
      • scikit-image
      • motile >=0.3
      • motile-toolbox >=0.3.4
      • pydantic
      • tifffile[all]
      • fonticon-fontawesome6
      • pyqtgraph
      • lxml-html-clean
      • myst-parser ; extra == 'docs'
      • sphinx ; extra == 'docs'
      • sphinx-autoapi ; extra == 'docs'
      • sphinx-rtd-theme ; extra == 'docs'
      • sphinxcontrib-video ; extra == 'docs'
      • napari ; extra == 'testing'
      • pyqt5 ; extra == 'testing'
      • pytest ; extra == 'testing'
      • pytest-cov ; extra == 'testing'
      • pytest-qt ; extra == 'testing'
      
+                                        
      • napari[all]
      • numpy
      • magicgui
      • qtpy
      • scikit-image
      • motile >=0.3
      • motile-toolbox >=0.3.5
      • pydantic
      • tifffile[all]
      • fonticon-fontawesome6
      • pyqtgraph
      • lxml-html-clean
      • myst-parser ; extra == 'docs'
      • sphinx ; extra == 'docs'
      • sphinx-autoapi ; extra == 'docs'
      • sphinx-rtd-theme ; extra == 'docs'
      • sphinxcontrib-video ; extra == 'docs'
      • napari ; extra == 'testing'
      • pyqt5 ; extra == 'testing'
      • pytest ; extra == 'testing'
      • pytest-cov ; extra == 'testing'
      • pytest-qt ; extra == 'testing'
      
                                     
      
                                 
      
                             
@@ -286,7 +286,7 @@ 
      Issues
      
                                                 
      
                                                 
        
-                                                    
      • 1.1.0
        • 
+                                                    
      • 2.0.1
        • 
                                                 
      
                                             
                                         
@@ -393,7 +393,7 @@ 
      Issues
      
                                             
      
                                                 
      
                                                     Requirements:
      
-                                                    
      • napari[all]
      • numpy
      • magicgui
      • qtpy
      • scikit-image
      • motile >=0.3
      • motile-toolbox >=0.3.4
      • pydantic
      • tifffile[all]
      • fonticon-fontawesome6
      • pyqtgraph
      • lxml-html-clean
      • myst-parser ; extra == 'docs'
      • sphinx ; extra == 'docs'
      • sphinx-autoapi ; extra == 'docs'
      • sphinx-rtd-theme ; extra == 'docs'
      • sphinxcontrib-video ; extra == 'docs'
      • napari ; extra == 'testing'
      • pyqt5 ; extra == 'testing'
      • pytest ; extra == 'testing'
      • pytest-cov ; extra == 'testing'
      • pytest-qt ; extra == 'testing'
      
+                                                    
      • napari[all]
      • numpy
      • magicgui
      • qtpy
      • scikit-image
      • motile >=0.3
      • motile-toolbox >=0.3.5
      • pydantic
      • tifffile[all]
      • fonticon-fontawesome6
      • pyqtgraph
      • lxml-html-clean
      • myst-parser ; extra == 'docs'
      • sphinx ; extra == 'docs'
      • sphinx-autoapi ; extra == 'docs'
      • sphinx-rtd-theme ; extra == 'docs'
      • sphinxcontrib-video ; extra == 'docs'
      • napari ; extra == 'testing'
      • pyqt5 ; extra == 'testing'
      • pytest ; extra == 'testing'
      • pytest-cov ; extra == 'testing'
      • pytest-qt ; extra == 'testing'
      
                                             
      
                                         
                                     
diff --git a/plugins/napam.html b/plugins/napam.html
index d09ad88..a086496 100644
--- a/plugins/napam.html
+++ b/plugins/napam.html
@@ -90,7 +90,7 @@
                                     
      
                                         
      Version:
      
                                         
        
-                                            
      • 0.1.2
        • 
+                                            
      • 0.1.3
        • 
                                         
      
                                     
      
                                 
@@ -128,19 +128,19 @@
                                 
      
                                     
                                 
      
                                 
      
                                     
      
                                         
      Open extension:
      
-                                        
+                                        
                                     
      
                                 
      
                                 
      
                                     
      
                                         
      Save extension:
      
-                                        
+                                        
                                     
      
                                 
      
                             
@@ -248,11 +248,11 @@ 
      A plugin that allows you to run macros (i.e. python scripts)
     padding-bottom: 0;
 }
         
-        
      License BSD-3
+        
      License BSD-3
 PyPI
 Python Version
-tests
-codecov
+tests
+codecov
 napari hub
      
 
      A plugin that allows you to run macros on the images for any kind of image processing.
      
 
      
@@ -292,7 +292,7 @@ 
      Issues
      
                                                 
      
                                                 
        
-                                                    
      • 0.1.2
        • 
+                                                    
      • 0.1.3
        • 
                                                 
      
                                             
                                         
@@ -349,21 +349,21 @@ 
      Issues
      
                                             
      
                                                 
      Plugin
                                                     type:
      
-                                                    
+                                                    
                                             
      
                                         
                                         
      
                                             
      
                                                 
      Open
                                                     extension:
      
-                                                    
+                                                    
                                             
      
                                         
      
                                         
      
                                             
      
                                                 
      Save
                                                     extension:
      
-                                                    
+                                                    
                                             
      
                                         
      
                                     
diff --git a/plugins/napari-3d-counter.html b/plugins/napari-3d-counter.html
index 0c954bc..c264a9f 100644
--- a/plugins/napari-3d-counter.html
+++ b/plugins/napari-3d-counter.html
@@ -90,7 +90,7 @@
                                     
      
                                         
      Version:
      
                                         
        
-                                            
      • 0.3.5
        • 
+                                            
      • 0.3.6
        • 
                                         
      
                                     
      
                                 
@@ -98,7 +98,7 @@
                                     
      
                                         
      Last updated:
      
                                         
        
-                                            
      • 2024-09-01
        • 
+                                            
      • 2024-10-16
        • 
                                         
      
                                     
      
                                 
@@ -172,7 +172,7 @@
                                 
      
                                     
      
                                         
      Requirements:
      
-                                        
      • numpy
      • qtpy
      • pandas
      • scikit-image
      • matplotlib
      • napari==0.5.3
      • tox; extra == "testing"
      • pytest; extra == "testing"
      • pytest-cov; extra == "testing"
      • pytest-qt; extra == "testing"
      • napari; extra == "testing"
      • pyqt5; extra == "testing"
      
+                                        
      • numpy
      • qtpy
      • pandas
      • scikit-image
      • matplotlib
      • napari==0.5.4
      • tox; extra == "testing"
      • pytest; extra == "testing"
      • pytest-cov; extra == "testing"
      • pytest-qt; extra == "testing"
      • napari; extra == "testing"
      • pyqt5; extra == "testing"
      
                                     
      
                                 
      
                             
@@ -367,7 +367,7 @@ 
      Issues
      
                                                 
      
                                                 
        
-                                                    
      • 0.3.5
        • 
+                                                    
      • 0.3.6
        • 
                                                 
      
                                             
                                         
@@ -377,7 +377,7 @@ 
      Issues
      
                                                     updated:
      
                                                 
        
-                                                    
      • 2024-09-01
        • 
+                                                    
      • 2024-10-16
        • 
                                                 
      
                                             
                                         
@@ -474,7 +474,7 @@ 
      Issues
      
                                             
      
                                                 
      
                                                     Requirements:
      
-                                                    
      • numpy
      • qtpy
      • pandas
      • scikit-image
      • matplotlib
      • napari==0.5.3
      • tox; extra == "testing"
      • pytest; extra == "testing"
      • pytest-cov; extra == "testing"
      • pytest-qt; extra == "testing"
      • napari; extra == "testing"
      • pyqt5; extra == "testing"
      
+                                                    
      • numpy
      • qtpy
      • pandas
      • scikit-image
      • matplotlib
      • napari==0.5.4
      • tox; extra == "testing"
      • pytest; extra == "testing"
      • pytest-cov; extra == "testing"
      • pytest-qt; extra == "testing"
      • napari; extra == "testing"
      • pyqt5; extra == "testing"
      
                                             
      
                                         
                                     
diff --git a/plugins/napari-LF.html b/plugins/napari-LF.html
index 327724a..d07ec3a 100644
--- a/plugins/napari-LF.html
+++ b/plugins/napari-LF.html
@@ -90,7 +90,7 @@
                                     
      
                                         
      Version:
      
                                         
        
-                                            
      • 0.1.6
        • 
+                                            
      • 0.1.7
        • 
                                         
      
                                     
      
                                 
@@ -338,7 +338,7 @@ 
      Installation
      
 
      From the napari menu, select Plugins > Main Menu (napari-LF). Note that you may need to close and reopen napari for the napari-LF to appear.
      
 
      Installation for developers
      
 
      Create a virtual environment from the command line for napari with the python libraries necessary for the light field plugin:
      
-
      conda create --name napari-lf python==3.9
+
      conda create -y -n napari-lf -c conda-forge python==3.9
 conda activate napari-lf
 
      
 
      Clone the github repository:
      
@@ -347,6 +347,9 @@ 
      Installation for developers
      
 cd napari-LF
 pip install -e .
 
      
+
      The necessary dependencies should be installed automatically with napari-LF. If for some reason pyopencl does not get installed properly, try installing with conda:
      
+
      conda install -c conda-forge pyopencl
+
      
 
      Contributing
      
 
      Contributions are very welcome. Tests can be run with tox, please ensure
 the coverage at least stays the same before you submit a pull request.
      
@@ -370,7 +373,7 @@ 
      Issues
      
                                                 
      
                                                 
        
-                                                    
      • 0.1.6
        • 
+                                                    
      • 0.1.7
        • 
                                                 
      
                                             
                                         
diff --git a/plugins/napari-SAMV2.html b/plugins/napari-SAMV2.html
new file mode 100644
index 0000000..1d8905f
--- /dev/null
+++ b/plugins/napari-SAMV2.html
@@ -0,0 +1,603 @@
+
+
+
+
+
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    Segment Anything V2 - napari Plugin - Krishnan Venkataraman
+
+    
+    
+    
+    
+    
+    
+        
+        
+        
+    
+
+
+
+
+    
      
+        
      
+            
      
+            
      
+            
      
+            
      
+                
+                
      
+                    
+                
      
+            
      
+            
      
+                
      
+                    
      
+                        
+                        
+                        
      
+                                
      
+                                    
      Segment Anything V2
      
+                                
      
+
+                                
+   
      
+        
+        PyPI 
+    
+    
      
+                                                                
+                                
      
+                                    
      Napari plugin for segment anything version 2 model from meta. Plugin primarily useful for segmenting 3d volumetric data or 3d time series data. 
      
+                                
      
+                                
        
+                                    
      • 
+                                        Krishnan Venkataraman
+                                    
        •                               
+                            
      
+                            
      View
+                                    project data
      
+                            
      
+                                
      
+                                    
      
+                                        
      
+                                            
      
+                                            
      
+                                        
      
+                                    
      
+                                
      
+                                
      
+                                
      
+                                
      
+                                    
      
+
+                                        
+        
+        
      Napari plugin to use segment anything version 2 models from Meta.
      
+
      Plugin primarily made for segmenting 3d volumetric data or 3d time series data.
      
+
      
+
      Installation
      
+
      Pre-requisite of samv2 installation needed: --- Our current plugin supports only sam v 2.0  not 2.1.   So, we need to pull the SAM repo around september 15 ,2024 (last update of SAM2.0)
      
+
      git clone https://github.com/facebookresearch/segment-anything-2.git
+cd segment-anything-2
+git rev-list -n 1 --before="2024-09-15" HEAD
+git checkout <commit_hash>
+pip install -e .
+
      
+
      You can install napari-SAMV2 via pip:
      
+
      pip install napari-SAMV2
+
      
+
      
+
      The plugin and installation tested with python 3.10 in conda environment with pytorch-cuda=12.1
      
+
      conda environment with example :
      
+
      conda create -n samv2_env python=3.10
+conda activate samv2_env
+conda install pytorch torchvision torchaudio pytorch-cuda=12.1 -c pytorch -c nvidia
+python -m pip install "napari[all]"
+
+git clone https://github.com/facebookresearch/segment-anything-2.git
+cd segment-anything-2
+git rev-list -n 1 --before="2024-09-15" HEAD
+
+git checkout <commit_hash>
+pip install -e .
+pip install napari-SAMV2
+
      
+
      
+
      Usage
      
+
      Middle mouse click - positive point
      
+
      Ctrl + Middle mouse click - negative point
      
+
      Time Series Segmentation :
      
+
      samv2_time_series_demo
      
+
      Volume Segmentation :
      
+
      samv2_volume_segmentation
      
+
      Reference :
      
+
      Example Data from in demo videos from,
+Cell tracking challenge - https://celltrackingchallenge.net/ 
+FlyEM project - https://www.janelia.org/project-team/flyem/hemibrain
      
+
      License
      
+
      Distributed under the terms of the BSD-3 license,
+"napari-SAMV2" is free and open source software
      
+
      Issues
      
+
      If you encounter any problems, please file an issue along with a detailed description.
      
+        
+
+                                    
      
+                                
      
+                                
+
      
+                                
      
+                                    
      
+                                        
      
+                                            
      
+                                                
      Version:
+                                                
      
+                                                
        
+                                                    
      • 0.0.5
        • 
+                                                
      
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      Last
+                                                    updated:
      
+                                                
        
+                                                    
      • Not available
        • 
+                                                
      
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      First
+                                                    released:
      
+                                                
        
+                                                    
      • Not available
        • 
+                                                
      
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      License:
+                                                
      
+                                                
+                                            
      
+                                        
      
+                                    
      
+                                    
      
+                                    
      
+                                    
      
+                                        
      
+                                            
      
+                                                
      Supported
+                                                    data:
      
+                                                
        
+                                                    
      • Information
+                                                            not submitted
        • 
+                                                
      
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      Plugin
+                                                    type:
      
+                                                    
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      Open
+                                                    extension:
      
+                                                    
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      Save
+                                                    extension:
      
+                                                    
+                                            
      
+                                        
      
+                                    
      
+                                    
      
+                                    
      
+                                    
      
+                                        
+                                        
      
+                                            
      
+                                                
      Python versions
+                                                    supported:
      
+                                                    
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      Operating
+                                                    system:
      
+                                                
        
+                                                    
      • Information
+                                                            not submitted
        • 
+                                                
      
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      
+                                                    Requirements:
      
+                                                    
      • numpy
      • magicgui
      • qtpy
      • scikit-image
      • tox; extra == "testing"
      • pytest; extra == "testing"
      • pytest-cov; extra == "testing"
      • pytest-qt; extra == "testing"
      • napari; extra == "testing"
      • pyqt5; extra == "testing"
      • numpy; extra == "testing"
      
+                                            
      
+                                        
      
+                                    
      
+                                
      
+                                    
+
      
+                            
      
+                        
      
+                    
      
+                
      
+            
      
+            
      
+            
      
+                
      
+                    
+                            
+                        GitHub repo
+                        About napari hubFAQ link to napari hub
+
+                    
      
+                        
      
+                            Disclaimer: This experiment aims to replicate key functionalities of napari-hub 
+                            using minimal dynamic elements, including real-time search and daily content updates.
+                        
      
+                    
      
+                
      
+                The
+                    napari hub is a service of the Chan Zuckerberg
+                        Initiative in collaboration with napari.
+                        
+                 
+                
      
+                    
+                            Go to napari main website.
+                            
+                            
+                            
+                            
+                            
+                            
+                                
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                
+                                
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                
+                            
+                        
+                    
      
+                            
+                                
+                                
+                                
+                                
+                                
+                            
+                            
+                                
+                                    
+                                
+                            
+                        
+                
      
+            
      
+        
      
+    
+
diff --git a/plugins/napari-SMLMLAB.html b/plugins/napari-SMLMLAB.html
index f493999..0df4479 100644
--- a/plugins/napari-SMLMLAB.html
+++ b/plugins/napari-SMLMLAB.html
@@ -90,7 +90,7 @@
                                     
      
                                         
      Version:
      
                                         
        
-                                            
      • 0.1.3
        • 
+                                            
      • 0.1.4
        • 
                                         
      
                                     
      
                                 
@@ -200,7 +200,7 @@
                                 
      
                                     
      
                                         
      Requirements:
      
-                                        
      • napari[all] ==0.5.0
      • numpy
      • magicgui
      • qtpy
      • scipy
      • pyqtgraph
      • picassosr
      • matplotlib
      • tqdm
      • pyqt5-tools
      • trackpy
      • tox ; extra == 'testing'
      • pytest ; extra == 'testing'
      • pytest-cov ; extra == 'testing'
      • pytest-qt ; extra == 'testing'
      • napari ; extra == 'testing'
      • pyqt5 ; extra == 'testing'
      
+                                        
      • napari[all]==0.5.0
      • numpy
      • magicgui
      • qtpy
      • scipy
      • pyqtgraph
      • picassosr==0.7.3
      • matplotlib
      • tqdm
      • pyqt5-tools
      • trackpy
      • tox; extra == "testing"
      • pytest; extra == "testing"
      • pytest-cov; extra == "testing"
      • pytest-qt; extra == "testing"
      • napari; extra == "testing"
      • pyqt5; extra == "testing"
      
                                     
      
                                 
      
                             
@@ -331,7 +331,7 @@ 
      Issues
      
                                                 
      
                                                 
        
-                                                    
      • 0.1.3
        • 
+                                                    
      • 0.1.4
        • 
                                                 
      
                                             
                                         
@@ -466,7 +466,7 @@ 
      Issues
      
                                             
      
                                                 
      
                                                     Requirements:
      
-                                                    
      • napari[all] ==0.5.0
      • numpy
      • magicgui
      • qtpy
      • scipy
      • pyqtgraph
      • picassosr
      • matplotlib
      • tqdm
      • pyqt5-tools
      • trackpy
      • tox ; extra == 'testing'
      • pytest ; extra == 'testing'
      • pytest-cov ; extra == 'testing'
      • pytest-qt ; extra == 'testing'
      • napari ; extra == 'testing'
      • pyqt5 ; extra == 'testing'
      
+                                                    
      • napari[all]==0.5.0
      • numpy
      • magicgui
      • qtpy
      • scipy
      • pyqtgraph
      • picassosr==0.7.3
      • matplotlib
      • tqdm
      • pyqt5-tools
      • trackpy
      • tox; extra == "testing"
      • pytest; extra == "testing"
      • pytest-cov; extra == "testing"
      • pytest-qt; extra == "testing"
      • napari; extra == "testing"
      • pyqt5; extra == "testing"
      
                                             
      
                                         
                                     
diff --git a/plugins/napari-activelearning.html b/plugins/napari-activelearning.html
index e65aa9c..8eab94e 100644
--- a/plugins/napari-activelearning.html
+++ b/plugins/napari-activelearning.html
@@ -90,7 +90,7 @@
                                     
      
                                         
      Version:
      
                                         
        
-                                            
      • 0.0.5
        • 
+                                            
      • 0.0.11
        • 
                                         
      
                                     
      
                                 
@@ -172,7 +172,7 @@
                                 
      
                                     
      
                                         
      Requirements:
      
-                                        
      • napari
      • numpy
      • dask[array]
      • magicgui
      • qtpy
      • scikit-image
      • tensorstore ==0.1.59
      • ome-zarr ==0.9.0
      • zarr
      • zarrdataset >=0.2.0
      • cellpose <=3.0.10,>=3.0.0 ; extra == 'cellpose'
      • tox ; extra == 'testing'
      • pytest ; extra == 'testing'
      • pytest-cov ; extra == 'testing'
      • pytest-qt ; extra == 'testing'
      • napari ; extra == 'testing'
      • pyqt5 ; extra == 'testing'
      
+                                        
      • napari
      • numpy
      • dask[array]
      • magicgui
      • qtpy
      • scikit-image
      • tensorstore==0.1.59
      • ome-zarr==0.9.0
      • zarr
      • zarrdataset>=0.2.0
      • cellpose>=3.0.0; extra == "cellpose"
      • tox; extra == "testing"
      • pytest; extra == "testing"
      • pytest-cov; extra == "testing"
      • pytest-qt; extra == "testing"
      • napari; extra == "testing"
      • pyqt5; extra == "testing"
      
                                     
      
                                 
      
                             
@@ -293,7 +293,7 @@ 
      Issues
      
                                                 
      
                                                 
        
-                                                    
      • 0.0.5
        • 
+                                                    
      • 0.0.11
        • 
                                                 
      
                                             
                                         
@@ -400,7 +400,7 @@ 
      Issues
      
                                             
      
                                                 
      
                                                     Requirements:
      
-                                                    
      • napari
      • numpy
      • dask[array]
      • magicgui
      • qtpy
      • scikit-image
      • tensorstore ==0.1.59
      • ome-zarr ==0.9.0
      • zarr
      • zarrdataset >=0.2.0
      • cellpose <=3.0.10,>=3.0.0 ; extra == 'cellpose'
      • tox ; extra == 'testing'
      • pytest ; extra == 'testing'
      • pytest-cov ; extra == 'testing'
      • pytest-qt ; extra == 'testing'
      • napari ; extra == 'testing'
      • pyqt5 ; extra == 'testing'
      
+                                                    
      • napari
      • numpy
      • dask[array]
      • magicgui
      • qtpy
      • scikit-image
      • tensorstore==0.1.59
      • ome-zarr==0.9.0
      • zarr
      • zarrdataset>=0.2.0
      • cellpose>=3.0.0; extra == "cellpose"
      • tox; extra == "testing"
      • pytest; extra == "testing"
      • pytest-cov; extra == "testing"
      • pytest-qt; extra == "testing"
      • napari; extra == "testing"
      • pyqt5; extra == "testing"
      
                                             
      
                                         
                                     
diff --git a/plugins/napari-assistant.html b/plugins/napari-assistant.html
index 8a2b6d0..da9e334 100644
--- a/plugins/napari-assistant.html
+++ b/plugins/napari-assistant.html
@@ -90,7 +90,7 @@
                                     
      
                                         
      Version:
      
                                         
        
-                                            
      • 0.4.8
        • 
+                                            
      • 0.4.10
        • 
                                         
      
                                     
      
                                 
@@ -98,7 +98,7 @@
                                     
      
                                         
      Last updated:
      
                                         
        
-                                            
      • 2024-09-30
        • 
+                                            
      • 2024-12-21
        • 
                                         
      
                                     
      
                                 
@@ -351,7 +351,7 @@ 
      Acknowledgements
      
                                                 
      
                                                 
        
-                                                    
      • 0.4.8
        • 
+                                                    
      • 0.4.10
        • 
                                                 
      
                                             
                                         
@@ -361,7 +361,7 @@ 
      Acknowledgements
      
                                                     updated:
      
                                                 
        
-                                                    
      • 2024-09-30
        • 
+                                                    
      • 2024-12-21
        • 
                                                 
      
                                             
                                         
diff --git a/plugins/napari-bacseg.html b/plugins/napari-bacseg.html
index 85ac85e..28f5117 100644
--- a/plugins/napari-bacseg.html
+++ b/plugins/napari-bacseg.html
@@ -90,7 +90,7 @@
                                     
      
                                         
      Version:
      
                                         
        
-                                            
      • 1.1.1
        • 
+                                            
      • 1.1.2
        • 
                                         
      
                                     
      
                                 
@@ -172,7 +172,7 @@
                                 
      
                                     
      
                                         
      Requirements:
      
-                                        
      • napari[all] ==0.5.0
      • torch
      • cellpose >=3.0.1
      • opencv-python
      • picassosr ==0.6.5
      • bactfit >=0.1.6
      • numpy
      • pyqt5
      • pyqt6
      • qtpy
      • scipy
      • natsort
      • tqdm
      • imagecodecs
      • tifffile
      • pandas
      • mat4py
      • glob2
      • matplotlib
      • scikit-image
      • roifile
      • openpyxl
      • shapely
      • colicoords
      • psutil
      • xmltodict
      • astropy
      • tiler
      • imageio-ffmpeg
      • aicspylibczi
      • czifile
      • omnipose
      • h5py
      • pyqtgraph
      • tox ; extra == 'testing'
      • pytest ; extra == 'testing'
      • pytest-cov ; extra == 'testing'
      • pytest-qt ; extra == 'testing'
      • napari ; extra == 'testing'
      • pyqt5 ; extra == 'testing'
      
+                                        
      • napari[all]==0.5.0
      • torch
      • torchvision
      • cellpose==3.0.1
      • opencv-python
      • picassosr==0.7.3
      • bactfit>=0.1.6
      • numpy
      • pyqt5
      • pyqt6
      • qtpy
      • scipy
      • natsort
      • tqdm
      • imagecodecs
      • tifffile
      • pandas
      • mat4py
      • glob2
      • matplotlib
      • scikit-image
      • roifile
      • openpyxl
      • shapely
      • colicoords
      • psutil
      • xmltodict
      • astropy
      • tiler
      • imageio-ffmpeg
      • aicspylibczi
      • czifile
      • omnipose
      • h5py
      • pyqtgraph
      • tox; extra == "testing"
      • pytest; extra == "testing"
      • pytest-cov; extra == "testing"
      • pytest-qt; extra == "testing"
      • napari; extra == "testing"
      • pyqt5; extra == "testing"
      
                                     
      
                                 
      
                             
@@ -318,7 +318,7 @@ 
      Issues
      
                                                 
      
                                                 
        
-                                                    
      • 1.1.1
        • 
+                                                    
      • 1.1.2
        • 
                                                 
      
                                             
                                         
@@ -425,7 +425,7 @@ 
      Issues
      
                                             
      
                                                 
      
                                                     Requirements:
      
-                                                    
      • napari[all] ==0.5.0
      • torch
      • cellpose >=3.0.1
      • opencv-python
      • picassosr ==0.6.5
      • bactfit >=0.1.6
      • numpy
      • pyqt5
      • pyqt6
      • qtpy
      • scipy
      • natsort
      • tqdm
      • imagecodecs
      • tifffile
      • pandas
      • mat4py
      • glob2
      • matplotlib
      • scikit-image
      • roifile
      • openpyxl
      • shapely
      • colicoords
      • psutil
      • xmltodict
      • astropy
      • tiler
      • imageio-ffmpeg
      • aicspylibczi
      • czifile
      • omnipose
      • h5py
      • pyqtgraph
      • tox ; extra == 'testing'
      • pytest ; extra == 'testing'
      • pytest-cov ; extra == 'testing'
      • pytest-qt ; extra == 'testing'
      • napari ; extra == 'testing'
      • pyqt5 ; extra == 'testing'
      
+                                                    
      • napari[all]==0.5.0
      • torch
      • torchvision
      • cellpose==3.0.1
      • opencv-python
      • picassosr==0.7.3
      • bactfit>=0.1.6
      • numpy
      • pyqt5
      • pyqt6
      • qtpy
      • scipy
      • natsort
      • tqdm
      • imagecodecs
      • tifffile
      • pandas
      • mat4py
      • glob2
      • matplotlib
      • scikit-image
      • roifile
      • openpyxl
      • shapely
      • colicoords
      • psutil
      • xmltodict
      • astropy
      • tiler
      • imageio-ffmpeg
      • aicspylibczi
      • czifile
      • omnipose
      • h5py
      • pyqtgraph
      • tox; extra == "testing"
      • pytest; extra == "testing"
      • pytest-cov; extra == "testing"
      • pytest-qt; extra == "testing"
      • napari; extra == "testing"
      • pyqt5; extra == "testing"
      
                                             
      
                                         
                                     
diff --git a/plugins/napari-bluesky.html b/plugins/napari-bluesky.html
new file mode 100644
index 0000000..74e7693
--- /dev/null
+++ b/plugins/napari-bluesky.html
@@ -0,0 +1,532 @@
+
+
+
+
+
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    
+    Bluesky - napari Plugin - Kyle Harrington
+
+    
+    
+    
+    
+    
+    
+        
+        
+        
+    
+
+
+
+
+    
      
+        
      
+            
      
+            
      
+            
      
+            
      
+                
+                
      
+                    
+                
      
+            
      
+            
      
+                
      
+                    
      
+                        
+                        
+                        
      
+                                
      
+                                    
      Bluesky
      
+                                
      
+
+                                
+   
      
+        
+        PyPI 
+    
+    
      
+                                                                
+                                
      
+                                    
      A plugin for posting to Bluesky from napari
      
+                                
      
+                                
        
+                                    
      • 
+                                        Kyle Harrington
+                                    
        •                               
+                            
      
+                            
      View
+                                    project data
      
+                            
      
+                                
      
+                                    
      
+                                        
      
+                                            
      
+                                            
      
+                                        
      
+                                    
      
+                                
      
+                                
      
+                                
      
+                                
      
+                                    
      
+
+                                        
+        
+        
      License MIT
+PyPI
+Python Version
+tests
+codecov
+napari hub
      
+
      A plugin for posting to Bluesky from napari
      
+
      
+
      This napari plugin was generated with copier using the napari-plugin-template.
      
+
+
+
      Installation
      
+
      You can install napari-bluesky via pip:
      
+
      pip install napari-bluesky
+
      
+
      To install latest development version :
      
+
      pip install git+https://github.com/kephale/napari-bluesky.git
+
      
+
      Contributing
      
+
      Contributions are very welcome. Tests can be run with tox, please ensure
+the coverage at least stays the same before you submit a pull request.
      
+
      License
      
+
      Distributed under the terms of the MIT license,
+"napari-bluesky" is free and open source software
      
+
      Issues
      
+
      If you encounter any problems, please file an issue along with a detailed description.
      
+        
+
+                                    
      
+                                
      
+                                
+
      
+                                
      
+                                    
      
+                                        
      
+                                            
      
+                                                
      Version:
+                                                
      
+                                                
        
+                                                    
      • 0.0.2
        • 
+                                                
      
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      Last
+                                                    updated:
      
+                                                
        
+                                                    
      • Not available
        • 
+                                                
      
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      First
+                                                    released:
      
+                                                
        
+                                                    
      • Not available
        • 
+                                                
      
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      License:
+                                                
      
+                                                
+                                            
      
+                                        
      
+                                    
      
+                                    
      
+                                    
      
+                                    
      
+                                        
      
+                                            
      
+                                                
      Supported
+                                                    data:
      
+                                                
        
+                                                    
      • Information
+                                                            not submitted
        • 
+                                                
      
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      Plugin
+                                                    type:
      
+                                                    
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      Open
+                                                    extension:
      
+                                                    
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      Save
+                                                    extension:
      
+                                                    
+                                            
      
+                                        
      
+                                    
      
+                                    
      
+                                    
      
+                                    
      
+                                        
+                                        
      
+                                            
      
+                                                
      Python versions
+                                                    supported:
      
+                                                    
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      Operating
+                                                    system:
      
+                                                
        
+                                                    
      • Information
+                                                            not submitted
        • 
+                                                
      
+                                            
      
+                                        
      
+                                        
      
+                                            
      
+                                                
      
+                                                    Requirements:
      
+                                                    
      • numpy
      • magicgui
      • qtpy
      • scikit-image
      • atproto
      • appdirs
      • python-dotenv
      • pillow
      • tox; extra == "testing"
      • pytest; extra == "testing"
      • pytest-cov; extra == "testing"
      • pytest-qt; extra == "testing"
      • napari; extra == "testing"
      • pyqt5; extra == "testing"
      
+                                            
      
+                                        
      
+                                    
      
+                                
      
+                                    
+
      
+                            
      
+                        
      
+                    
      
+                
      
+            
      
+            
      
+            
      
+                
      
+                    
+                            
+                        GitHub repo
+                        About napari hubFAQ link to napari hub
+
+                    
      
+                        
      
+                            Disclaimer: This experiment aims to replicate key functionalities of napari-hub 
+                            using minimal dynamic elements, including real-time search and daily content updates.
+                        
      
+                    
      
+                
      
+                The
+                    napari hub is a service of the Chan Zuckerberg
+                        Initiative in collaboration with napari.
+                        
+                 
+                
      
+                    
+                            Go to napari main website.
+                            
+                            
+                            
+                            
+                            
+                            
+                                
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                
+                                
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                    
+                                
+                            
+                        
+                    
      
+                            
+                                
+                                
+                                
+                                
+                                
+                            
+                            
+                                
+                                    
+                                
+                            
+                        
+                
      
+            
      
+        
      
+    
+
diff --git a/plugins/napari-boxmanager.html b/plugins/napari-boxmanager.html
index c9a939d..e63d8a8 100644
--- a/plugins/napari-boxmanager.html
+++ b/plugins/napari-boxmanager.html
@@ -90,7 +90,7 @@
                                     
      
                                         
      Version:
      
                                         
        
-                                            
      • 0.4.12
        • 
+                                            
      • 0.4.14
        • 
                                         
      
                                     
      
                                 
@@ -172,7 +172,7 @@
                                 
      
                                     
      
                                         
      Requirements:
      
-                                        
      • matplotlib
      • mrcfile
      • numpy <=1.23.5
      • pystardb >=0.4.2
      • napari >=0.4.17
      • pandas
      • scipy
      • tifffile
      • tqdm
      • mrcfile ; extra == 'testing'
      • napari ; extra == 'testing'
      • pyqt5 ; extra == 'testing'
      • pytest ; extra == 'testing'
      • pytest-cov ; extra == 'testing'
      • pytest-qt ; extra == 'testing'
      • tox ; extra == 'testing'
      
+                                        
      • matplotlib
      • mrcfile
      • numpy<=1.23.5
      • pystardb>=0.4.2
      • napari>=0.4.17
      • pandas
      • scipy
      • tifffile
      • tqdm
      • mrcfile; extra == "testing"
      • napari; extra == "testing"
      • pyqt5; extra == "testing"
      • pytest; extra == "testing"
      • pytest-cov; extra == "testing"
      • pytest-qt; extra == "testing"
      • tox; extra == "testing"
      
                                     
      
                                 
      
                             
@@ -297,7 +297,7 @@ 
      Issues
      
                                                 
      
                                                 
        
-                                                    
      • 0.4.12
        • 
+                                                    
      • 0.4.14
        • 
                                                 
      
                                             
                                         
@@ -404,7 +404,7 @@ 
      Issues
      
                                             
      
                                                 
      
                                                     Requirements:
      
-                                                    
      • matplotlib
      • mrcfile
      • numpy <=1.23.5
      • pystardb >=0.4.2
      • napari >=0.4.17
      • pandas
      • scipy
      • tifffile
      • tqdm
      • mrcfile ; extra == 'testing'
      • napari ; extra == 'testing'
      • pyqt5 ; extra == 'testing'
      • pytest ; extra == 'testing'
      • pytest-cov ; extra == 'testing'
      • pytest-qt ; extra == 'testing'
      • tox ; extra == 'testing'
      
+                                                    
      • matplotlib
      • mrcfile
      • numpy<=1.23.5
      • pystardb>=0.4.2
      • napari>=0.4.17
      • pandas
      • scipy
      • tifffile
      • tqdm
      • mrcfile; extra == "testing"
      • napari; extra == "testing"
      • pyqt5; extra == "testing"
      • pytest; extra == "testing"
      • pytest-cov; extra == "testing"
      • pytest-qt; extra == "testing"
      • tox; extra == "testing"
      
                                             
      
                                         
                                     
diff --git a/plugins/napari-chatgpt.html b/plugins/napari-chatgpt.html
index cc76d87..fdcabc3 100644
--- a/plugins/napari-chatgpt.html
+++ b/plugins/napari-chatgpt.html
@@ -90,7 +90,7 @@
                                     
      
                                         
      Version:
      
                                         
        
-                                            
      • 2024.8.31
        • 
+                                            
      • 2024.10.18.1
        • 
                                         
      
                                     
      
                                 
@@ -172,7 +172,7 @@
                                 
      
                                     
      
                                         
      Requirements:
      
-                                        
      • numpy
      • magicgui
      • scikit-image
      • qtpy
      • QtAwesome
      • langchain==0.2.15
      • langchain-community==0.2.14
      • langchain-openai==0.1.23
      • langchain-anthropic==0.1.23
      • openai==1.42.0
      • anthropic==0.34.1
      • fastapi
      • uvicorn
      • websockets
      • tiktoken
      • wikipedia
      • lxml
      • gTTS
      • playsound
      • matplotlib
      • xarray
      • arbol
      • playwright
      • duckduckgo-search==6.2.11
      • ome-zarr
      • transformers
      • cryptography
      • tabulate
      • numba
      • imageio[ffmpeg,pyav]
      • notebook
      • nbformat
      • jedi
      • black
      • lxml-html-clean
      • tox; extra == "testing"
      • pytest; extra == "testing"
      • pytest-cov; extra == "testing"
      • pytest-qt; extra == "testing"
      • napari; extra == "testing"
      • pyqt5; extra == "testing"
      
+                                        
      • numpy
      • magicgui
      • scikit-image
      • qtpy
      • QtAwesome
      • langchain==0.2.15
      • langchain-community==0.2.14
      • langchain-openai==0.1.23
      • langchain-anthropic==0.1.23
      • openai==1.42.0
      • anthropic==0.34.1
      • fastapi
      • uvicorn
      • websockets
      • tiktoken
      • wikipedia
      • lxml
      • gTTS
      • playsound
      • matplotlib
      • xarray
      • arbol
      • playwright
      • duckduckgo-search==6.3.2
      • ome-zarr
      • transformers
      • cryptography
      • tabulate
      • numba
      • imageio[ffmpeg,pyav]
      • notebook
      • nbformat
      • jedi
      • black
      • lxml-html-clean
      • tox; extra == "testing"
      • pytest; extra == "testing"
      • pytest-cov; extra == "testing"
      • pytest-qt; extra == "testing"
      • napari; extra == "testing"
      • pyqt5; extra == "testing"
      
                                     
      
                                 
      
                             
@@ -397,7 +397,7 @@ 
      Issues
      
                                                 
      
                                                 
        
-                                                    
      • 2024.8.31
        • 
+                                                    
      • 2024.10.18.1
        • 
                                                 
      
                                             
                                         
@@ -504,7 +504,7 @@ 
      Issues
      
                                             
      
                                                 
      
                                                     Requirements:
      
-                                                    
      • numpy
      • magicgui
      • scikit-image
      • qtpy
      • QtAwesome
      • langchain==0.2.15
      • langchain-community==0.2.14
      • langchain-openai==0.1.23
      • langchain-anthropic==0.1.23
      • openai==1.42.0
      • anthropic==0.34.1
      • fastapi
      • uvicorn
      • websockets
      • tiktoken
      • wikipedia
      • lxml
      • gTTS
      • playsound
      • matplotlib
      • xarray
      • arbol
      • playwright
      • duckduckgo-search==6.2.11
      • ome-zarr
      • transformers
      • cryptography
      • tabulate
      • numba
      • imageio[ffmpeg,pyav]
      • notebook
      • nbformat
      • jedi
      • black
      • lxml-html-clean
      • tox; extra == "testing"
      • pytest; extra == "testing"
      • pytest-cov; extra == "testing"
      • pytest-qt; extra == "testing"
      • napari; extra == "testing"
      • pyqt5; extra == "testing"
      
+                                                    
      • numpy
      • magicgui
      • scikit-image
      • qtpy
      • QtAwesome
      • langchain==0.2.15
      • langchain-community==0.2.14
      • langchain-openai==0.1.23
      • langchain-anthropic==0.1.23
      • openai==1.42.0
      • anthropic==0.34.1
      • fastapi
      • uvicorn
      • websockets
      • tiktoken
      • wikipedia
      • lxml
      • gTTS
      • playsound
      • matplotlib
      • xarray
      • arbol
      • playwright
      • duckduckgo-search==6.3.2
      • ome-zarr
      • transformers
      • cryptography
      • tabulate
      • numba
      • imageio[ffmpeg,pyav]
      • notebook
      • nbformat
      • jedi
      • black
      • lxml-html-clean
      • tox; extra == "testing"
      • pytest; extra == "testing"
      • pytest-cov; extra == "testing"
      • pytest-qt; extra == "testing"
      • napari; extra == "testing"
      • pyqt5; extra == "testing"
      
                                             
      
                                         
                                     
diff --git a/plugins/napari-clemreg.html b/plugins/napari-clemreg.html
index 92b0caa..17f469d 100644
--- a/plugins/napari-clemreg.html
+++ b/plugins/napari-clemreg.html
@@ -172,7 +172,7 @@
                                 
      
                                     
      
                                         
      Requirements:
      
-                                        
      • typing-extensions
      • setuptools
      • packaging
      • numpy ==1.22.0
      • magicgui ==0.7.3
      • scipy ==1.10.1
      • napari
      • scikit-image ==0.21.0
      • h5py ==3.9.0
      • matplotlib ==3.7.3
      • imageio ==2.31.5
      • tifffile ==2023.7.10
      • probreg ==0.3.6
      • open3d ==0.17.0
      • transforms3d ==0.4.1
      • tqdm ==4.66.1
      • empanada-dl ==0.1.7
      • torch ==2.0.1
      • connected-components-3d ==3.12.3
      
+                                        
      • typing_extensions
      • setuptools
      • packaging
      • numpy==1.22.0
      • magicgui==0.7.3
      • scipy==1.10.1
      • napari
      • scikit-image==0.21.0
      • h5py==3.9.0
      • matplotlib==3.7.3
      • imageio==2.31.5
      • tifffile==2023.7.10
      • probreg==0.3.6
      • open3d==0.17.0
      • transforms3d==0.4.1
      • tqdm==4.66.1
      • empanada-dl==0.1.7
      • torch==2.0.1
      • magicgui==0.7.3
      • connected-components-3d==3.12.3
      
                                     
      
                                 
      
                             
@@ -472,7 +472,7 @@ 
      Issues
      
                                             
      
                                                 
      
                                                     Requirements:
      
-                                                    
      • typing-extensions
      • setuptools
      • packaging
      • numpy ==1.22.0
      • magicgui ==0.7.3
      • scipy ==1.10.1
      • napari
      • scikit-image ==0.21.0
      • h5py ==3.9.0
      • matplotlib ==3.7.3
      • imageio ==2.31.5
      • tifffile ==2023.7.10
      • probreg ==0.3.6
      • open3d ==0.17.0
      • transforms3d ==0.4.1
      • tqdm ==4.66.1
      • empanada-dl ==0.1.7
      • torch ==2.0.1
      • connected-components-3d ==3.12.3
      
+                                                    
      • typing_extensions
      • setuptools
      • packaging
      • numpy==1.22.0
      • magicgui==0.7.3
      • scipy==1.10.1
      • napari
      • scikit-image==0.21.0
      • h5py==3.9.0
      • matplotlib==3.7.3
      • imageio==2.31.5
      • tifffile==2023.7.10
      • probreg==0.3.6
      • open3d==0.17.0
      • transforms3d==0.4.1
      • tqdm==4.66.1
      • empanada-dl==0.1.7
      • torch==2.0.1
      • magicgui==0.7.3
      • connected-components-3d==3.12.3
      
                                             
      
                                         
                                     
diff --git a/plugins/napari-console.html b/plugins/napari-console.html
index 9693815..999085b 100644
--- a/plugins/napari-console.html
+++ b/plugins/napari-console.html
@@ -90,7 +90,7 @@
                                     
      
                                         
      Version:
      
                                         
        
-                                            
      • 0.1.0
        • 
+                                            
      • 0.1.1
        • 
                                         
      
                                     
      
                                 
@@ -98,7 +98,7 @@
                                     
      
                                         
      Last updated:
      
                                         
        
-                                            
      • 2024-10-02
        • 
+                                            
      • 2024-12-21
        • 
                                         
      
                                     
      
                                 
@@ -320,7 +320,7 @@ 
      Issues
      
                                                 
      
                                                 
        
-                                                    
      • 0.1.0
        • 
+                                                    
      • 0.1.1
        • 
                                                 
      
                                             
                                         
@@ -330,7 +330,7 @@ 
      Issues
      
                                                     updated:
      
                                                 
        
-                                                    
      • 2024-10-02
        • 
+                                                    
      • 2024-12-21
        • 
                                                 
      
                                             
                                         
diff --git a/plugins/napari-convpaint.html b/plugins/napari-convpaint.html
index 5f20ed0..2a591e0 100644
--- a/plugins/napari-convpaint.html
+++ b/plugins/napari-convpaint.html
@@ -90,7 +90,7 @@
                                     
      
                                         
      Version:
      
                                         
        
-                                            
      • 0.5.1
        • 
+                                            
      • 0.5.2
        • 
                                         
      
                                     
      
                                 
@@ -98,7 +98,7 @@
                                     
      
                                         
      Last updated:
      
                                         
        
-                                            
      • 2024-09-20
        • 
+                                            
      • 2024-10-16
        • 
                                         
      
                                     
      
                                 
@@ -311,7 +311,7 @@ 
      Cite Convpaint
      
                                                 
      
                                                 
        
-                                                    
      • 0.5.1
        • 
+                                                    
      • 0.5.2
        • 
                                                 
      
                                             
                                         
@@ -321,7 +321,7 @@ 
      Cite Convpaint
      
                                                     updated:
      
                                                 
        
-                                                    
      • 2024-09-20
        • 
+                                                    
      • 2024-10-16
        • 
                                                 
      
                                             
                                         
diff --git a/plugins/napari-cosmos-ts.html b/plugins/napari-cosmos-ts.html
index f6ce0c7..33257c1 100644
--- a/plugins/napari-cosmos-ts.html
+++ b/plugins/napari-cosmos-ts.html
@@ -90,7 +90,7 @@
                                     
      
                                         
      Version:
      
                                         
        
-                                            
      • 0.3.2
        • 
+                                            
      • 0.3.6
        • 
                                         
      
                                     
      
                                 
@@ -172,7 +172,7 @@
                                 
      
                                     
      
                                         
      Requirements:
      
-                                        
      • qtpy>=2.4.1
      • pyqtgraph>=0.13.4
      • pystackreg>=0.2.7
      • pycpd>=2.0.0
      • qtawesome>=1.3.1
      • h5py>=3.11.0
      
+                                        
      • numpy<2.1,>=2.0
      • qtpy>=2.4.1
      • pyqtgraph>=0.13.4
      • pystackreg>=0.2.7
      • pycpd>=2.0.0
      • qtawesome>=1.3.1
      • h5py>=3.11.0
      
                                     
      
                                 
      
                             
@@ -312,7 +312,7 @@ 
      Install for Beginners
      
                                                 
      
                                                 
        
-                                                    
      • 0.3.2
        • 
+                                                    
      • 0.3.6
        • 
                                                 
      
                                             
                                         
@@ -419,7 +419,7 @@ 
      Install for Beginners
      
                                             
      
                                                 
      
                                                     Requirements:
      
-                                                    
      • qtpy>=2.4.1
      • pyqtgraph>=0.13.4
      • pystackreg>=0.2.7
      • pycpd>=2.0.0
      • qtawesome>=1.3.1
      • h5py>=3.11.0
      
+                                                    
      • numpy<2.1,>=2.0
      • qtpy>=2.4.1
      • pyqtgraph>=0.13.4
      • pystackreg>=0.2.7
      • pycpd>=2.0.0
      • qtawesome>=1.3.1
      • h5py>=3.11.0
      
                                             
      
                                         
                                     
diff --git a/plugins/napari-cryoet-data-portal.html b/plugins/napari-cryoet-data-portal.html
index 6cdb659..74f8491 100644
--- a/plugins/napari-cryoet-data-portal.html
+++ b/plugins/napari-cryoet-data-portal.html
@@ -90,7 +90,7 @@
                                     
      
                                         
      Version:
      
                                         
        
-                                            
      • 0.4.1
        • 
+                                            
      • 0.5.0
        • 
                                         
      
                                     
      
                                 
@@ -172,7 +172,7 @@
                                 
      
                                     
      
                                         
      Requirements:
      
-                                        
      • cmap
      • cryoet-data-portal~=3.0
      • fsspec[http,s3]
      • npe2
      • numpy
      • napari>=0.4.19
      • napari-ome-zarr
      • ndjson
      • qtpy
      • superqt
      • tox; extra == "testing"
      • pytest; extra == "testing"
      • pytest-cov; extra == "testing"
      • pytest-mock; extra == "testing"
      • pytest-qt; extra == "testing"
      • napari; extra == "testing"
      • pyqt5; extra == "testing"
      
+                                        
      • cmap
      • cryoet_data_portal~=4.0
      • fsspec[http,s3]
      • npe2
      • numpy
      • napari>=0.4.19
      • napari_ome_zarr
      • ndjson
      • qtpy
      • superqt
      • tox; extra == "testing"
      • pytest; extra == "testing"
      • pytest-cov; extra == "testing"
      • pytest-mock; extra == "testing"
      • pytest-qt; extra == "testing"
      • napari; extra == "testing"
      • pyqt5; extra == "testing"
      
                                     
      
                                 
      
                             
@@ -323,7 +323,7 @@ 
      Acknowledgements
      
                                                 
      
                                                 
        
-                                                    
      • 0.4.1
        • 
+                                                    
      • 0.5.0
        • 
                                                 
      
                                             
                                         
@@ -430,7 +430,7 @@ 
      Acknowledgements
      
                                             
      
                                                 
      
                                                     Requirements:
      
-                                                    
      • cmap
      • cryoet-data-portal~=3.0
      • fsspec[http,s3]
      • npe2
      • numpy
      • napari>=0.4.19
      • napari-ome-zarr
      • ndjson
      • qtpy
      • superqt
      • tox; extra == "testing"
      • pytest; extra == "testing"
      • pytest-cov; extra == "testing"
      • pytest-mock; extra == "testing"
      • pytest-qt; extra == "testing"
      • napari; extra == "testing"
      • pyqt5; extra == "testing"
      
+                                                    
      • cmap
      • cryoet_data_portal~=4.0
      • fsspec[http,s3]
      • npe2
      • numpy
      • napari>=0.4.19
      • napari_ome_zarr
      • ndjson
      • qtpy
      • superqt
      • tox; extra == "testing"
      • pytest; extra == "testing"
      • pytest-cov; extra == "testing"
      • pytest-mock; extra == "testing"
      • pytest-qt; extra == "testing"
      • napari; extra == "testing"
      • pyqt5; extra == "testing"
      
                                             
      
                                         
                                     
diff --git a/plugins/napari-cryofibsem-imgproc.html b/plugins/napari-cryofibsem-imgproc.html
index c6d90b9..04ddaae 100644
--- a/plugins/napari-cryofibsem-imgproc.html
+++ b/plugins/napari-cryofibsem-imgproc.html
@@ -90,7 +90,7 @@
                                     
      
                                         
      Version:
      
                                         
        
-                                            
      • 0.0.1
        • 
+                                            
      • 0.0.3
        • 
                                         
      
                                     
      
                                 
@@ -469,7 +469,7 @@ 
      A napari plugin for artifact removal, noise reduction, contr
 
 
      Installation
      
 
      It is recommended to create a fresh [conda] environment with Python 3.12 and napari:
      
-
      conda create -n imgpro_env -c conda-forge python=3.12.0 napari pyqt
+
      conda create -n imgproc-env -c conda-forge python=3.12.0 napari pyqt
 
      
 
      You can install napari-cryofibsem-imgproc via pip:
      
 
      pip install napari-cryofibsem-imgproc
@@ -503,7 +503,7 @@ 
      Issues
      
                                                 
      
                                                 
        
-                                                    
      • 0.0.1
        • 
+                                                    
      • 0.0.3
        • 
                                                 
      
                                             
                                         
diff --git a/plugins/napari-ctc-io.html b/plugins/napari-ctc-io.html
index eb460ad..d4139a1 100644
--- a/plugins/napari-ctc-io.html
+++ b/plugins/napari-ctc-io.html
@@ -9,15 +9,15 @@
     
-    
-    
-    
-    
-    
+    
+    
+    
+    
+    
     
     
     
-    Open/write CTC data format - napari Plugin - Benjamin Gallusser
+    Read CTC format - napari Plugin - Benjamin Gallusser
 
     
     
@@ -90,7 +90,7 @@
                                     
      
                                         
      Version:
      
                                         
        
-                                            
      • 0.2.0
        • 
+                                            
      • 0.2.1
        • 
                                         
      
                                     
      
                                 
@@ -172,7 +172,7 @@
                                 
      
                                     
      
                                         
      Requirements:
      
-                                        
      • napari
      • numpy
      • scikit-image
      • tifffile
      • pandas
      • imagecodecs
      • tox ; extra == 'testing'
      • pytest ; extra == 'testing'
      • pytest-cov ; extra == 'testing'
      
+                                        
      • napari
      • numpy
      • scikit-image
      • tifffile
      • pandas
      • imagecodecs
      • tox; extra == "testing"
      • pytest; extra == "testing"
      • pytest-cov; extra == "testing"
      
                                     
      
                                 
      
                             
@@ -184,7 +184,7 @@
                         
      
                                 
      
-                                    
      Open/write CTC data format
      
+                                    
      Read CTC format
      
                                 
      
 
                                 
@@ -195,7 +195,7 @@ 
      Open/write CTC data
     
                                                                 
                                 
      
-                                    
      Drag and drop annotations/results in the Cell Tracking Challenge (CTC) format into napari.
      
+                                    
      Drag and drop/write tracks from/to the Cell Tracking Challenge (CTC) format.