From 87bd06d22bc853a2137af27aeeb09fb778b93252 Mon Sep 17 00:00:00 2001 From: Gianluca Baio Date: Tue, 21 Nov 2023 23:37:51 +0000 Subject: [PATCH 1/3] Remove .save files --- .../rmarkdown/report/section_ceplane.Rmd.save | 21 ------------------- 1 file changed, 21 deletions(-) delete mode 100644 inst/rmarkdown/report/section_ceplane.Rmd.save diff --git a/inst/rmarkdown/report/section_ceplane.Rmd.save b/inst/rmarkdown/report/section_ceplane.Rmd.save deleted file mode 100644 index 6ac04b8a..00000000 --- a/inst/rmarkdown/report/section_ceplane.Rmd.save +++ /dev/null @@ -1,21 +0,0 @@ - -## Cost-effectiveness plane - -The following graph shows the _cost-effectiveness plane_. This presents the joint distribution of the population average benefit and cost differential, $(\Delta_e,\Delta_c)$ and can be used to assess the uncertainty underlying the decision-making problem. - -Each point in the graph represents a 'potential future' in terms of expected incremental economic outcomes. The shaded portion of the plane is the _'sustainability area'_. The more points lay in the sustainability area, the more likely that the reference intervention will turn out to be cost-effective, at a given willingness to pay threshold, $k$ (in this case selected at $k=$ `r rmd_ -params$wtp`). - - -```{r, echo=echo, fig.width=4.6, fig.height=4.6, fig.align=align, warning=FALSE, message=FALSE, comment=NA} -n.ints <- m$n_comparators - -if (n.ints == 2) { - graph <- "base" - pos <- c(1, 1) -} else { - graph <- "ggplot2" - pos <- TRUE -} -ceplane.plot(m, graph = graph, pos = pos, wtp = rmd_params$wtp) -``` From e22158ff1949f9a69d7958216849e770858c4733 Mon Sep 17 00:00:00 2001 From: Gianluca Baio Date: Tue, 21 Nov 2023 23:55:14 +0000 Subject: [PATCH 2/3] Update NEWS.md --- NEWS.md | 8 ++++++++ 1 file changed, 8 insertions(+) diff --git a/NEWS.md b/NEWS.md index 8ecf9da3..8f8f69fb 100644 --- a/NEWS.md +++ b/NEWS.md @@ -1,6 +1,14 @@ # BCEA 2.4.5 +_November 2023_ + +Some cosmetic changes to clean up + +* Removed the (by now, unnecessary) appveyor webhook +* Added correct 'Remotes' in the 'DESCRIPTION' file to point to the correct GitHub repos for 'voi' and 'plotrix' +* Changed the class of the object 'smoking_output' to be used in the 'evppi' example avoiding the need for 'rjags' + _October 2023_ Moved internal EVPPI calculation out of `BCEA` and now uses `voi` package instead. From d4fb1b6b18ff1600a375e6a5c49e08cc1d400a64 Mon Sep 17 00:00:00 2001 From: Gianluca Baio Date: Wed, 22 Nov 2023 15:59:18 +0000 Subject: [PATCH 3/3] Add citation file --- CITATION.cff | 20 ++++++++++++++++++++ 1 file changed, 20 insertions(+) create mode 100644 CITATION.cff diff --git a/CITATION.cff b/CITATION.cff new file mode 100644 index 00000000..ac7f665b --- /dev/null +++ b/CITATION.cff @@ -0,0 +1,20 @@ +cff-version: 1.2.0 +message: "If you use this software, please cite it as below." +authors: +- family-names: "Baio" + given-names: "Gianluca" + orcid: "https://orcid.org/0000-0003-4314-2570" +- family-names: "Berardi" + given-names: "Andrea" + orcid: https://orcid.org/0000-0002-2906-496X +- family-names: "Heath" + given-names: "Anna" + orcid: https://orcid.org/0000-0002-7263-4251 +- family-names: "Green" + given-names: "Nathan" + orcid: https://orcid.org/0000-0003-2745-1736 +title: "BCEA: Bayesian Cost-Effectiveness Analysis" +version: 2.4-5 +doi: 10.1007/978-3-319-55718-2 +date-released: 2023-11-20 +url: "https://gianluca.statistica.it/software/bcea/"