From 19d079ff1c13b7d8c1cfeac9576f1e79914aa474 Mon Sep 17 00:00:00 2001
From: n-kall <33577035+n-kall@users.noreply.github.com>
Date: Tue, 17 Sep 2024 14:37:07 +0300
Subject: [PATCH 1/3] first attempt at language selection
---
_quarto.yml | 10 ++++++++++
gen_linear_regression/r2d2.qmd | 9 +++++++--
scripts/language_select.js | 31 +++++++++++++++++++++++++++++++
3 files changed, 48 insertions(+), 2 deletions(-)
create mode 100644 scripts/language_select.js
diff --git a/_quarto.yml b/_quarto.yml
index d568e5b..fd74829 100644
--- a/_quarto.yml
+++ b/_quarto.yml
@@ -6,6 +6,13 @@ website:
sidebar:
collapse-level: 1
contents:
+ - text: |
+
- section: "Regression"
contents:
- gen_linear_regression/gen_linear_regression_overview.qmd
@@ -58,6 +65,9 @@ website:
format:
html:
theme: cosmo
+ include-after-body:
+ - text: |
+
css: styles.css
toc: true
code-fold: true
diff --git a/gen_linear_regression/r2d2.qmd b/gen_linear_regression/r2d2.qmd
index 27c0874..26bbf2b 100644
--- a/gen_linear_regression/r2d2.qmd
+++ b/gen_linear_regression/r2d2.qmd
@@ -36,7 +36,12 @@ $$
Priors on $\alpha$ and $\sigma$. Hyperparameters $\xi$, $\mu_{R^2}$, $\phi_{R^2}$.
-# Stan code
-
+# Implementation
+::: {.example .stan}
```{.stan include="../stan/r2d2.stan"}
```
+:::
+
+::: {.example .pymc}
+
+:::
\ No newline at end of file
diff --git a/scripts/language_select.js b/scripts/language_select.js
new file mode 100644
index 0000000..e51d3df
--- /dev/null
+++ b/scripts/language_select.js
@@ -0,0 +1,31 @@
+document.addEventListener("DOMContentLoaded", function() {
+ const langSelector = document.getElementById("language-selector");
+
+ // Load the selected language from localStorage if available
+ const savedLang = localStorage.getItem("selectedLanguage");
+ if (savedLang) {
+ langSelector.value = savedLang;
+ }
+
+ // Function to show/hide code examples based on the selected language
+ function updateExamples() {
+ const selectedLang = langSelector.value;
+
+ // Save the selected language to localStorage
+ localStorage.setItem("selectedLanguage", selectedLang);
+
+ document.querySelectorAll(".example").forEach(function(example) {
+ if (example.classList.contains(selectedLang)) {
+ example.style.display = "block";
+ } else {
+ example.style.display = "none";
+ }
+ });
+ }
+
+ // Listen for changes in the dropdown menu
+ langSelector.addEventListener("change", updateExamples);
+
+ // Initialize by showing the appropriate examples when the page loads
+ updateExamples();
+});
From 1455115e9a3b69fe598ccbfb8bd0efcbb867f759 Mon Sep 17 00:00:00 2001
From: n-kall <33577035+n-kall@users.noreply.github.com>
Date: Tue, 17 Sep 2024 14:46:14 +0300
Subject: [PATCH 2/3] mark stan examples as such
---
gen_linear_regression/gr2.qmd | 4 +++-
gen_linear_regression/l1_ball.qmd | 4 +++-
hierarchical_regression/r2d2m2.qmd | 4 +++-
3 files changed, 9 insertions(+), 3 deletions(-)
diff --git a/gen_linear_regression/gr2.qmd b/gen_linear_regression/gr2.qmd
index 3e70cce..c852904 100644
--- a/gen_linear_regression/gr2.qmd
+++ b/gen_linear_regression/gr2.qmd
@@ -37,7 +37,9 @@ Priors on $\alpha$ and $\sigma$. Hyperparameters $\xi$, $\mu_{R^2}$, $\phi_{R^2}
Prior on simplex $\phi$.
-# Stan code
+# Implementation
+::: {.example .stan}
```{.stan include="../stan/r2d2.stan"}
```
+:::
\ No newline at end of file
diff --git a/gen_linear_regression/l1_ball.qmd b/gen_linear_regression/l1_ball.qmd
index 5eabca1..1c1fe41 100644
--- a/gen_linear_regression/l1_ball.qmd
+++ b/gen_linear_regression/l1_ball.qmd
@@ -21,7 +21,9 @@ $$
Prior on the radius of the ball $r$. Prior on the unprojected $\beta$
coefficients.
-# Stan code
+# Implementation
+::: {.example .stan}
```{.stan include="../stan/l1_ball.stan"}
```
+:::
\ No newline at end of file
diff --git a/hierarchical_regression/r2d2m2.qmd b/hierarchical_regression/r2d2m2.qmd
index 4475f8f..722a25d 100644
--- a/hierarchical_regression/r2d2m2.qmd
+++ b/hierarchical_regression/r2d2m2.qmd
@@ -8,7 +8,9 @@ An extension of the R2D2 prior for multi-level models [@aguilarIntuitiveJointPri
# Definition
-# Stan code
+# Implementation
+:::{.example .stan}
```{.stan include="../stan/r2d2m2.stan"}
```
+:::
\ No newline at end of file
From 383c7c6343d0acbe0f61e18a3ade3f1e2bd174c8 Mon Sep 17 00:00:00 2001
From: n-kall <33577035+n-kall@users.noreply.github.com>
Date: Tue, 17 Sep 2024 14:48:49 +0300
Subject: [PATCH 3/3] mark another stan example
---
gen_linear_regression/bernoulli_logit.qmd | 2 ++
1 file changed, 2 insertions(+)
diff --git a/gen_linear_regression/bernoulli_logit.qmd b/gen_linear_regression/bernoulli_logit.qmd
index 995d0d1..5dd1bd0 100644
--- a/gen_linear_regression/bernoulli_logit.qmd
+++ b/gen_linear_regression/bernoulli_logit.qmd
@@ -62,9 +62,11 @@ logis_sigma <- function(n, q) {
$p(\alpha) \propto \exp{(-\text{abs}({\alpha / \sqrt(2) \sigma})^\gamma)}$
+:::{.example .stan}
```stan
target += -abs((alpha) / (sqrt(2.0) * alpha_scale))^(alpha_power);
```
+:::
Similar to the method for the logistic prior, choosing $\sigma$ can be
done with the following function: