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Update ODK profile.txt & fix build freezes #605

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merged 1 commit into from
Jul 4, 2024
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@joeflack4 joeflack4 commented Jul 3, 2024

Resolves #602

Overview

Update ODK profile.txt to remove most checks that occur during prepare_release`, mainly because they are not relevant.
Also fixes #602, which occurs as a result of one or more of these checks taking a very long or indefinite amount of time as of #600.

Pre-merge checklist

Documentation

Was the documentation added/updated under docs/?

  • Yes
  • No, updates to the docs were not necessary after careful consideration

QC

Was the full pipeline run before submitting this PR using sh run.sh make build-mondo-ingest on this branch (after
docker pull obolibrary/odkfull:dev), and no errors occurred?

  • Yes
  • No, there are no functional (code-related) changes to the pipeline in the PR, so no re-run is necessary

This change was also applied to

New Packages

Were any new Python packages added?

Were any other non-Python packages added?

PR Review and Conversations Resolved

Has the PR been sufficiently reviewed by at least 1 team member of the Mondo Technical team and all threads resolved?

  • Yes

- Update: profile.txt: Removed most checks that occur during prepare_release, mainly because they are not relevant.
@joeflack4 joeflack4 changed the base branch from main to develop July 3, 2024 20:54
@joeflack4 joeflack4 added the bug Something isn't working label Jul 3, 2024
ERROR multiple_definitions
ERROR multiple_equivalent_classes
ERROR multiple_labels
INFO invalid_xref
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The changes

Nico did this in this commit, as part of #600. But I felt it might help to have this show up as its own PR.

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QC build

This change was also applied to

@joeflack4 joeflack4 mentioned this pull request Jul 3, 2024
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@joeflack4 joeflack4 merged commit f697229 into develop Jul 4, 2024
@joeflack4 joeflack4 deleted the profile-update branch July 4, 2024 20:54
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Successfully merging this pull request may close these issues.

Bug: Build freezes on prepare_release (mondo-ingest-edit.owl-obo-report.tsv)
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