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SDL API v2 returned a file without indicating what region it's in #167

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cloudbroken opened this issue Mar 12, 2020 · 0 comments
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@cloudbroken
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Hi, getting this error with fusera 2.0 on AWS. In examining the verbose log files, the API is returning a location in the format "https://trace.ncbi.nlm.nih.gov/Traces/sdlr/sdlr.cgi?jwt=$LONGKEY". The json response is printed below.

    "version": "2",
    "result": [
        {
            "bundle": "ERR2208887",
            "status": 200,
            "msg": "ok",
            "files": [
                {
                    "object": "srapub_files|ERR2208887",
                    "type": "gzip",
                    "name": "ipiPD1_1_EDT_R1.fastq.gz",
                    "size": 12903872683,
                    "md5": "8f8aa66e71196d6f67229e21e12a8f57",
                    "modificationDate": "2019-09-06T19:48:44Z",
                    "locations": [
                        {

link": "http://ftp.sra.ebi.ac.uk/vol1/run/ERR220/ERR2208887/ipiPD1_1_EDT_R1.fastq.gz",
                            "service": "ncbi"
                        }
                    ]
                },
                {
                    "object": "srapub_files|ERR2208887",
                    "type": "gzip",
                    "name": "ipiPD1_1_EDT_R2.fastq.gz",
                    "size": 12906634692,
                    "md5": "f761f5537d1baaa7dcb8c135d89bf8dc",
                    "modificationDate": "2019-09-06T19:48:44Z",
                    "locations": [
                        {
                            "link": "http://ftp.sra.ebi.ac.uk/vol1/run/ERR220/ERR2208887/ipiPD1_1_EDT_R2.fastq.gz",
                            "service": "ncbi"
                        }
                    ]
                },
                {
                    "object": "srapub|ERR2208887",
"type": "sra",
                    "name": "ERR2208887",
                    "size": 17344898460,
                    "md5": "b00341d9a59366a57ce48ee66d196f26",
                    "modificationDate": "2019-03-02T21:35:09Z",
                    "locations": [
                        {
                            "link": "https://trace.ncbi.nlm.nih.gov/Traces/sdlr/sdlr.cgi?jwt=$LONGKEY",
                            "service": "s3",
                            "region": "us-east-1",
                            "expirationDate": "2020-03-16T17:14:03Z",
                            "ceRequired": true
                        }
                    ]
                }
            ]
        }
    ]
}
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