From e98bb38a1d0358b96301653e916c4fc369a9242e Mon Sep 17 00:00:00 2001 From: silask Date: Wed, 4 Oct 2023 20:39:10 +0200 Subject: [PATCH] no full test --- .github/workflows/python-package-conda.yml | 84 +++++++++++----------- 1 file changed, 42 insertions(+), 42 deletions(-) diff --git a/.github/workflows/python-package-conda.yml b/.github/workflows/python-package-conda.yml index b0e2b7ce..226614d4 100644 --- a/.github/workflows/python-package-conda.yml +++ b/.github/workflows/python-package-conda.yml @@ -170,46 +170,46 @@ jobs: - full-test: - runs-on: ubuntu-latest - needs: build-and-dryrun - strategy: - max-parallel: 1 - env: - N_THREADS: 2 - MEM: 3 - - steps: - - name: Checkout - uses: actions/checkout@v3.5.2 - - - uses: mamba-org/setup-micromamba@v1 - with: - environment-file: atlasenv.yml - environment-name: atlasenv - cache-environment-key: atlasenv- - - - - name: Install atlas - run: | - python -m pip install . --no-deps -vv - atlas --help - - # - name: Clone Example Data Repository - # run: git clone https://github.com/metagenome-atlas/example_data.git + # full-test: + # runs-on: ubuntu-latest + # needs: build-and-dryrun + # strategy: + # max-parallel: 1 + # env: + # N_THREADS: 2 + # MEM: 3 + + # steps: + # - name: Checkout + # uses: actions/checkout@v3.5.2 + + # - uses: mamba-org/setup-micromamba@v1 + # with: + # environment-file: atlasenv.yml + # environment-name: atlasenv + # cache-environment-key: atlasenv- + + + # - name: Install atlas + # run: | + # python -m pip install . --no-deps -vv + # atlas --help + + # # - name: Clone Example Data Repository + # # run: git clone https://github.com/metagenome-atlas/example_data.git - - name: Run Test - run: | - test/test_ci.sh --resources mem=$MEM java_mem=$MEM --jobs=$N_THREADS --restart-times=2 - - - name: Store Logs - uses: actions/upload-artifact@v2 - with: - name: logs - path: test_ci/logs - - - name: Store Sample Logs - uses: actions/upload-artifact@v2 - with: - name: sample_logs - path: test_ci/Streptococcus/logs + # - name: Run Test + # run: | + # test/test_ci.sh --resources mem=$MEM java_mem=$MEM --jobs=$N_THREADS --restart-times=2 + + # - name: Store Logs + # uses: actions/upload-artifact@v2 + # with: + # name: logs + # path: test_ci/logs + + # - name: Store Sample Logs + # uses: actions/upload-artifact@v2 + # with: + # name: sample_logs + # path: test_ci/Streptococcus/logs