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We can either replace stitle instead of ssciname for all next runs or I can add a parameter to specify that one would like to use stitle instead of ssciname for the current run.
Because viruses with a segmented genome share the same
ssciname
inorgs_list.tsv
it's only possible to make a coverage plot of one of the segments.If one could (alternatively) use
stitle
for the--organism
argument, it would be possible to distinguish between the different segments.VirMet/src/virmet/covplot.py
Line 53 in 97351c2
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