publish.yml

on:
  workflow_dispatch:
  push:
    branches: main

name: Quarto Publish

jobs:
  build-deploy:
    runs-on: ubuntu-latest
    permissions:
      contents: write
    steps:
      - name: Check out repository
        uses: actions/checkout@v4

      - name: Cache R packages
        uses: actions/cache@v3
        id: cache
        with:
          path: ${{ env.R_LIBS_USER }}
          key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }}
          restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-

      - name: Install libcurl
        run: |
          sudo apt-get install libcurl4-openssl-dev

      - name: Set up Quarto
        uses: quarto-dev/quarto-actions/setup@v2

      - name: Install R
        uses: r-lib/actions/setup-r@v2
        with:
          r-version: '4.4.0'

      - name: Install R Packages
        # if: steps.cache.outputs.cache-hit != 'true'
        run: |
          installed.packages()
          dependencies <- c("rmarkdown", "dplyr", "ggplot2", "plotly", "sessioninfo")
          needs_installation <- dependencies[!dependencies %in% installed.packages()]
          install.packages(needs_installation)
          library("rmarkdown")
        shell: Rscript {0}

      - name: Render and Publish
        uses: quarto-dev/quarto-actions/publish@v2
        with:
          target: gh-pages
        env:
          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}