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Laurent Gatto edited this page Aug 3, 2014 · 16 revisions

Notes about R/Bioc for proteomics.

Ideas:

  • Label-free quantification
  • MS QC support (integration with QuaMeter from David Tabb). Related: qcmetrics for a general framework to define and bundle QC items and msQC.
  • Better fragmentation pattern prediction for spectra annotation - what is, if any, already available?
  • Add handling modifications
  • Add deisotoping capability - what is, if any, already available?
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