-
Notifications
You must be signed in to change notification settings - Fork 0
/
Copy pathmark017.out
129 lines (88 loc) · 5.11 KB
/
mark017.out
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
Program MARK - Survival Rate Estimation with Capture-Recapture Data
gfortran(dble) Vers. 9.0 Mar 2018 25-Apr-2018 15:04:38 Page 001
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
This version was compiled by GCC version 7.2.1 20170829 (Red Hat 7.2.1-1) using the options:
-cpp -D_REENTRANT -D IEEE -D DBLEPRECISION -m64 -mtune=generic -march=x86-64
-O2 -fimplicit-none -fbounds-check -funroll-loops -ftree-vectorize
-ffpe-summary=invalid,zero,overflow,underflow -fno-unsafe-math-optimizations
-frounding-math -fsignaling-nans -fopenmp.
This problem will use 3 of 4 possible threads.
INPUT --- proc title ;
CPU Time in seconds for last procedure was 0.00
INPUT --- proc chmatrix occasions= 2 groups= 1 etype= Brownie ICMeans
INPUT --- NoHist hist= 5 ;
INPUT --- time interval 1 1 ;
INPUT --- glabel(1)=Group 1;
Number of unique encounter histories read was 5.
Number of individual covariates read was 0.
Time interval lengths are all equal to 1.
Data type number is 10
Data type is Dead Recoveries (Brownie et al.)
CPU Time in seconds for last procedure was 0.00
Program MARK - Survival Rate Estimation with Capture-Recapture Data
gfortran(dble) Vers. 9.0 Mar 2018 25-Apr-2018 15:04:38 Page 002
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
INPUT --- proc estimate link=Logit NOLOOP varest=2ndPart ;
INPUT --- model={ S(~1)f(~1) };
INPUT --- group=1 S rows=1 cols=1 Triang ;
INPUT --- 1 ;
INPUT --- group=1 f rows=2 cols=2 Triang ;
INPUT --- 2 2 ;
INPUT --- 2 ;
INPUT --- design matrix constraints=2 covariates=2 identity;
INPUT --- blabel(1)=S:(Intercept);
INPUT --- blabel(2)=f:(Intercept);
INPUT --- rlabel(1)=S g1 c1 a0 t1;
INPUT --- rlabel(2)=f g1 c1 a0 t1;
Link Function Used is LOGIT
Variance Estimation Procedure Used is 2ndPart
-2logL(saturated) = 19490.354
Effective Sample Size = 15459
* * WARNING * * Error number 0 from VA09AD optimization routine.
Number of function evaluations was 12 for 2 parameters.
Time for numerical optimization was 0.01 seconds.
-2logL { S(~1)f(~1) } = 19524.043
Penalty { S(~1)f(~1) } = -0.0000000
Gradient { S(~1)f(~1) }:
0.000000 0.000000
Maximum ABS(G) { S(~1)f(~1) } = 0.000000
S Vector { S(~1)f(~1) }:
3173.733 220.7533
Time to compute number of parameters was 0.01 seconds.
Gap Method for Num. of Estimated Parameters { S(~1)f(~1) } = 2
Threshold { S(~1)f(~1) } = 0.0000000
Numerical Threshold Method for Num. of Estimated Parameters { S(~1)f(~1) } = 2
Number of Estimated Parameters { S(~1)f(~1) } = 2
DEVIANCE { S(~1)f(~1) } = 33.689771
DEVIANCE Degrees of Freedom { S(~1)f(~1) } = 1
c-hat { S(~1)f(~1) } = 33.689771
AIC { S(~1)f(~1) } = 19528.043
AICc { S(~1)f(~1) } = 19528.044
BIC { S(~1)f(~1) } = 19543.335
Pearson Chisquare { S(~1)f(~1) } = 33.925128
Possible Encounter Histories { S(~1)f(~1) } = 5
Pearson Chisquare df { S(~1)f(~1) } = 1
Pearson chat { S(~1)f(~1) } = 33.925128
Sum(Observed/Expected) { S(~1)f(~1) } = 5.0442311
Fletcher chat { S(~1)f(~1) } = 33.627651
LOGIT Link Function Parameters of { S(~1)f(~1) }
95% Confidence Interval
Parameter Beta Standard Error Lower Upper
------------------------- -------------- -------------- -------------- --------------
1:S:(Intercept) -0.6214157 0.0665737 -0.7519002 -0.4909312
2:f:(Intercept) -1.4213513 0.0203217 -1.4611817 -1.3815208
Program MARK - Survival Rate Estimation with Capture-Recapture Data
gfortran(dble) Vers. 9.0 Mar 2018 25-Apr-2018 15:04:38 Page 003
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Real Function Parameters of { S(~1)f(~1) }
95% Confidence Interval
Parameter Estimate Standard Error Lower Upper
-------------------------- -------------- -------------- -------------- --------------
1:S g1 c1 a0 t1 0.3494595 0.0151347 0.3204074 0.3796742
2:f g1 c1 a0 t1 0.1944498 0.0031832 0.1882866 0.2007649
CPU Time in seconds for last procedure was 0.01
INPUT --- proc stop;
CPU Time in minutes for this job was 0.00
Time Start = 15:04:38.003 Time End = 15:04:38.012
Wall Clock Time in minutes for this job was 0.00
E X E C U T I O N S U C C E S S F U L