Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Parallelize HDF5 → Zarr conversion #10

Open
ryan-williams opened this issue Oct 17, 2018 · 0 comments
Open

Parallelize HDF5 → Zarr conversion #10

ryan-williams opened this issue Oct 17, 2018 · 0 comments

Comments

@ryan-williams
Copy link
Member

@tomwhite's old prototype for traversing HDF5 files (via NetCDF) using Spark is still in the singlecell module

It would be good to add parallelization options to the convert CLI; most likely a Spark-specific code-path will be necessary for that, though in general it would be great to plumb parallelization through cats.Traverse / using Cats' Parallel. Futures and cloud-functions might be workable there.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant