Bioinformatics in Python
| note: | BioKit is tested under Python 2.7 Note yet fully compatible with python 3.3 but should be easy to fix (import issue) |
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| contributions: | Please join https://github.com/biokit/biokit and share your notebooks https://github.com/biokit/biobooks/ |
| issues: | Please use https://github.com/biokit/biokit/issues |
From travis, coverage is about 50% at the moment, which is low because some tests are ignored. Tests ignored are those that are slow or required R dependencies. To be ignored, we filled the setup.cfg with an option called attr. IF you comment that attribute in the setup.cfg and run
python setup.py nosetests
You should reach a higher coverage (about 70%)