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update iso_generate_summary_table and support outliers #14

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4 of 7 tasks
sebkopf opened this issue Feb 26, 2019 · 0 comments
Open
4 of 7 tasks

update iso_generate_summary_table and support outliers #14

sebkopf opened this issue Feb 26, 2019 · 0 comments
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@sebkopf
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sebkopf commented Feb 26, 2019

  • rename to more generic iso_summarize_data_table
  • groups needs to be namespaced
  • renamed special char columns don't work, example to reproduce: iso_generate_summary_table(rename(mpg, d 13C/12C = cty), raw=d 13C/12C)
  • allow simplified use that takes all columns by default (if no ...) specified expect grouping columns, to generate the data table
  • allow flexible functions
  • implement outlier identification function based on distance from mean + sd: e.g. outside a 1, 2, 3 sigma range (see nu_tests in isoreader), maybe iso_identify_outliers(n_sigma = 5)
  • implement exclude_outliers = TRUE flag (default FALSE) parameter in iso_summarize_data_table that if set checks if outliers column exists in the data table (if not, points to running iso_identifiy_outliers() first), and then calculates the stats only based on those that are not outliers. Will also have to include a col_x n for each column to indicate how many of the total n were used for the calcluation
@sebkopf sebkopf self-assigned this Feb 26, 2019
sebkopf added a commit that referenced this issue Mar 27, 2019
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