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When I want to save the heatmap with infercnv.pl.chromosome_heatmap, I noticed about I can't not specify the position to save the heatmap. May be the save parameter can be modified to better specify the position to save?
The text was updated successfully, but these errors were encountered:
File "infercnv.py", line 66, in <module>
cnv.pl.chromosome_heatmap(df, groupby="Cluster", dendrogram=True, ax=ax)
File "singlecell/lib/python3.8/site-packages/infercnvpy/pl/_chromosome_heatmap.py", line 75, in chromosome_heatmap
return_ax_dic = sc.pl.heatmap(
File "singlecell/lib/python3.8/site-packages/scanpy/plotting/_anndata.py", line 1177, in heatmap
im = heatmap_ax.imshow(obs_tidy.values, aspect='auto', norm=norm, **kwds)
TypeError: inner() got multiple values for argument 'ax'
Description of feature
When I want to save the heatmap with
infercnv.pl.chromosome_heatmap
, I noticed about I can't not specify the position to save the heatmap. May be thesave
parameter can be modified to better specify the position to save?The text was updated successfully, but these errors were encountered: