.gitignore

# History files
.Rhistory
.Rapp.history
# Session Data files
.RData
# User-specific files
.Ruserdata
.DS_Store
# Example code in package build process
*-Ex.R
# Output files from R CMD build
/*.tar.gz
# Output files from R CMD check
/*.Rcheck/
# RStudio files
.Rproj.user/
# produced vignettes or readme
README.html
vignettes/*.html
vignettes/*.pdf
# OAuth2 token, see https://github.com/hadley/httr/releases/tag/v0.3
.httr-oauth
# knitr and R markdown default cache directories
*_cache/
/cache/
# Temporary files created by R markdown
*.utf8.md
*.knit.md
# R Environment Variables
.Renviron
# Data folders with large datasets
data_raw
data_ignored
# bernhardt metabolism R package
BernhardtMetabolism_0.1.1
  # unzipped version
metabolism_synthesis 
# local project todo list
todo_autotrophy.txt
*.doc*
Carter_ecosystems_cover_letter.pdf
Autotrophy_in_rivers*
/*.pdf

# figures
figures