From 665aaceed6293e032973fddd590e87c2ff9b11d0 Mon Sep 17 00:00:00 2001
From: Heru Handika <herubiolog@gmail.com>
Date: Wed, 4 Sep 2024 13:05:38 -0500
Subject: [PATCH] Fix issue with missing references did not capture the entire
 found sequences.

---
 src/core/maf/convert.rs | 4 +++-
 1 file changed, 3 insertions(+), 1 deletion(-)

diff --git a/src/core/maf/convert.rs b/src/core/maf/convert.rs
index 5183438..d7b14e9 100644
--- a/src/core/maf/convert.rs
+++ b/src/core/maf/convert.rs
@@ -93,7 +93,9 @@ impl<'a> MafConverter<'a> {
                             }
                         },
                         None => {
-                            missing_refs.insert(target.source.to_string(), aln);
+                            let name =
+                                format!("{}-{}-{}", target.source, target.start, target.size,);
+                            missing_refs.insert(name.replace(".", "_"), aln);
                         }
                     }
                 }