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[Version: Any] Duplicate proteins crash MS Annika #21

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michabirklbauer opened this issue Jun 19, 2024 · 0 comments
Open

[Version: Any] Duplicate proteins crash MS Annika #21

michabirklbauer opened this issue Jun 19, 2024 · 0 comments
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bug Something isn't working info Information that might be important workaround A potential workaround for the problem is available

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@michabirklbauer
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If multiple fasta files are selected for search in MS Annika, users have to make sure that they don't overlap - so do not contain the same protein twice (or more often). Duplicate proteins may lead to a crash in MS Annika as Proteome Discoverer enforces that proteins must be unique. A good practice is to merge fasta files beforehand (so pasting all sequences into one fasta file) and only use one fasta file for search in MS Annika, as Proteome Discoverer makes sure that each fasta file only contains unique proteins.

@michabirklbauer michabirklbauer self-assigned this Jun 19, 2024
@michabirklbauer michabirklbauer added bug Something isn't working info Information that might be important workaround A potential workaround for the problem is available labels Jun 19, 2024
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Labels
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