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Handle outdated Entrez gene entries #1065
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Some more technical details:
Once gene deprecation is enabled via the above there are a few additional things to do:
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Entrez sometimes moves genes to a different/new entrez ID: E.g. SMIM44 (entrez ID 122152363) has been replaced with entrez ID 122405565. We currently have both in the database but they should probably be handled in a way that the replaced gene can no longer be used.
We should have CIViCbot handle these - deprecate the gene feature entry and remove deprecated gene features from the typeahead.
Add comment to the gene feature to explain why it was deprecated. If possible, try to note which gene feature it has been replaced by.We should also flag variants (or evidence) under the gene feature that was deprecated.
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