From e244c5a2d412a49638e173b2c12850a72350bc70 Mon Sep 17 00:00:00 2001 From: tefirman Date: Wed, 3 Jul 2024 11:26:20 -0700 Subject: [PATCH] Switching from GHCR to DockerHub --- ww-fastq-to-cram.wdl | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/ww-fastq-to-cram.wdl b/ww-fastq-to-cram.wdl index 5d5d2f7..3439e60 100644 --- a/ww-fastq-to-cram.wdl +++ b/ww-fastq-to-cram.wdl @@ -25,8 +25,8 @@ workflow PairedFastqsToUnmappedCram { Array[InputData] batch_info } - String gatk_docker = "ghcr.io/getwilds/gatk:4.3.0.0" - String samtools_docker = "ghcr.io/getwilds/samtools:1.11" + String gatk_docker = "getwilds/gatk:4.3.0.0" + String samtools_docker = "getwilds/samtools:1.11" scatter (sample in batch_info) { # for every sample in your batch, String base_file_name = sample.sample_name + "_" + sample.dataset_id