You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
{{ message }}
This repository has been archived by the owner on Jan 31, 2020. It is now read-only.
When I ran install using the instrux here https://github.com/genome/gms/wiki/GMS-Installation-on-Docker,
I ran into an error where it was trying to install github.com/genome/gms-core, which I assume is deprecated.
Below are steps to replicate. This is a very cool tool. Thanks!
docker pull gatoravi/sgms_jdoe
docker run --privileged -i -t gatoravi/sgms_jdoe /bin/bash
sudo -i -u jdoe
sudo apt-get update
git clone https://github.com/genome/gms -b docker-test
cd ~/gms
make dockerinit
make
excerpted from stdout:
remote: Counting objects: 2444, done.
remote: Total 2444 (delta 0), reused 0 (delta 0), pack-reused 2444
Receiving objects: 100% (2444/2444), 370.56 KiB, done.
Resolving deltas: 100% (1207/1207), done.
Branch gms-pub set up to track remote branch gms-pub from origin.
Switched to a new branch 'gms-pub'
cd /opt/gms/CRZ1N122/sw/rails/ && git ls-remote --exit-code . gms-pub 1>/dev/null || (echo "failed to clone gms-webviews repo" && false)
[ -e /opt/gms/CRZ1N122/sw/genome/.git ] || sudo git clone http://github.com/genome/gms-core.git /opt/gms/CRZ1N122/sw/genome && cd /opt/gms/CRZ1N122/sw/genome && sudo git checkout gms-pub
Cloning into '/opt/gms/CRZ1N122/sw/genome'...
Username for 'http://github.com':
I tried a variety of usernames but then investigated and it seems like there is no gms-core.
The text was updated successfully, but these errors were encountered:
Sign up for freeto subscribe to this conversation on GitHub.
Already have an account?
Sign in.
When I ran install using the instrux here https://github.com/genome/gms/wiki/GMS-Installation-on-Docker,
I ran into an error where it was trying to install github.com/genome/gms-core, which I assume is deprecated.
Below are steps to replicate. This is a very cool tool. Thanks!
docker pull gatoravi/sgms_jdoe
docker run --privileged -i -t gatoravi/sgms_jdoe /bin/bash
sudo -i -u jdoe
sudo apt-get update
git clone https://github.com/genome/gms -b docker-test
cd ~/gms
make dockerinit
make
excerpted from stdout:
remote: Counting objects: 2444, done.
remote: Total 2444 (delta 0), reused 0 (delta 0), pack-reused 2444
Receiving objects: 100% (2444/2444), 370.56 KiB, done.
Resolving deltas: 100% (1207/1207), done.
Branch gms-pub set up to track remote branch gms-pub from origin.
Switched to a new branch 'gms-pub'
cd /opt/gms/CRZ1N122/sw/rails/ && git ls-remote --exit-code . gms-pub 1>/dev/null || (echo "failed to clone gms-webviews repo" && false)
[ -e /opt/gms/CRZ1N122/sw/genome/.git ] || sudo git clone http://github.com/genome/gms-core.git /opt/gms/CRZ1N122/sw/genome && cd /opt/gms/CRZ1N122/sw/genome && sudo git checkout gms-pub
Cloning into '/opt/gms/CRZ1N122/sw/genome'...
Username for 'http://github.com':
I tried a variety of usernames but then investigated and it seems like there is no gms-core.
The text was updated successfully, but these errors were encountered: