diff --git a/metadata/rules/README.md b/metadata/rules/README.md index 1a121d2a..217210c1 100644 --- a/metadata/rules/README.md +++ b/metadata/rules/README.md @@ -1094,7 +1094,7 @@ If an annotation has GO_REF:0000118 (GAF column 6, GPAD column 5) and the taxon ## Annotations to term that are candidates for obsoletion should be removed * id: [GORULE:0000065](https://github.com/geneontology/go-site/blob/master/metadata/rules/gorule-0000065.md) - * status: approved + * status: implemented Terms scheduled for obsoletion are identified by the subset gocheck_obsoletion_candidate. diff --git a/metadata/rules/gorule-0000065.md b/metadata/rules/gorule-0000065.md index 8eb8a1eb..f202a779 100644 --- a/metadata/rules/gorule-0000065.md +++ b/metadata/rules/gorule-0000065.md @@ -4,7 +4,7 @@ id: GORULE:0000065 title: "Annotations to term that are candidates for obsoletion should be removed" type: report fail_mode: soft -status: approved +status: implemented contact: "go-quality@lists.stanford.edu" implementations: - language: python diff --git a/pipeline/requirements.txt b/pipeline/requirements.txt index fd6f11f4..b717e52d 100644 --- a/pipeline/requirements.txt +++ b/pipeline/requirements.txt @@ -1,5 +1,5 @@ PyYAML -ontobio==2.9.11 +ontobio==2.9.12 click pyparsing==2.4.7 antlr4-python3-runtime==4.9.3