Codebase for the analysis in our paper An updated suite of viral vectors for in vivo calcium imaging using intracerebral and retro-orbital injections
sensor_analysis.ipynb
Contains the analysis for
- correlations between raw fluorescence and neuropil,
- signal-to-noise ratio, and
- signal intensity
for all the different calcium indicators.
soma_axon.ipynb
Contains the analysis of the soma-axon pair correlations.