Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Normalize plate names in Cellvoyager converter #843

Open
jluethi opened this issue Sep 30, 2024 · 1 comment
Open

Normalize plate names in Cellvoyager converter #843

jluethi opened this issue Sep 30, 2024 · 1 comment

Comments

@jluethi
Copy link
Collaborator

jluethi commented Sep 30, 2024

Let's improve our strategy for plate name of the OME-Zarrs. We want to avoid some special characters like # (see fractal-analytics-platform/fractal-vizarr-viewer#33). We should also drop other potentially weird characters from plate names.

We still want to support _ and - though.
And we need to harmonize this with our plate name uniqueness check

@tcompa
Copy link
Collaborator

tcompa commented Sep 30, 2024

In case it's useful, we have a couple of sanitize/validate auxiliary functions in fractal-server which may be similar to what could be used here - see https://github.com/fractal-analytics-platform/fractal-server/blob/032367f69e292065f451c45e4c11614727e63b6f/fractal_server/string_tools.py.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
Development

No branches or pull requests

2 participants