diff --git a/flask-app/application/modules/routes.py b/flask-app/application/modules/routes.py
index 4ae9a9d..c9debe9 100644
--- a/flask-app/application/modules/routes.py
+++ b/flask-app/application/modules/routes.py
@@ -1072,12 +1072,18 @@ def search(dui, action):
if scr in ['yes', 'no']:
session['scr'] = scr
+ if request.args.get('qtp'):
+ qtp = request.args.get('qtp').strip()
+ if qtp in ['def', 'all', 'notes']:
+ session['qtp'] = qtp
+
if action == 'clear':
session.pop('q', None)
session.pop('sshow', None)
session.pop('sstatus', None)
session.pop('slang', None)
session.pop('scr', None)
+ session.pop('qtp', None)
session.pop('dui', None)
session.pop('adui', None)
@@ -1150,7 +1156,7 @@ def search(dui, action):
if text_query:
data = sparql.getSparqlData('search',
query=text_query, show=session.get('sshow'), status=session.get('sstatus'),
- slang=session.get('slang'), scr=session.get('scr'))
+ slang=session.get('slang'), scr=session.get('scr'), qtp=session.get('qtp'))
# pp.pprint(data)
if data:
@@ -1180,7 +1186,8 @@ def search(dui, action):
return render_template('search.html',
hits_cnt=hits_cnt, hits=hits, dui=dui, tree=tree, descriptor=descriptor, concepts=concepts, tab=tab,
- show=session.get('sshow'), status=session.get('sstatus'), slang=session.get('slang'), scr=session.get('scr'),
+ show=session.get('sshow'), status=session.get('sstatus'),
+ slang=session.get('slang'), scr=session.get('scr'), qtp=session.get('qtp'),
audit=audit, dview=dview)
diff --git a/flask-app/application/modules/sparql.py b/flask-app/application/modules/sparql.py
index 31bd2ab..8a46f72 100644
--- a/flask-app/application/modules/sparql.py
+++ b/flask-app/application/modules/sparql.py
@@ -36,7 +36,7 @@ def show_elapsed(begin, tag=''):
def getSparqlData(template, query='', show='', status='', top='', tn='', concept='', otype='Descriptor',
- output='json', slang=None, lang=None, scr=None, key=None, cache=None):
+ output='json', slang=None, lang=None, scr=None, qtp=None, key=None, cache=None):
t0 = timer()
@@ -60,7 +60,7 @@ def getSparqlData(template, query='', show='', status='', top='', tn='', concept
sparql = render_template('sparql/' + template + '.sparql', query=cleanQuery(query), otype=otype,
show=show, status=status, top=top, tn=tn, toptn=toptn, concept=concept,
- lang=lang, lang_umls=lang_umls, slang=slang, scr=scr)
+ lang=lang, lang_umls=lang_umls, slang=slang, scr=scr, qtp=qtp)
if app.debug:
print(sparql, '\n')
diff --git a/flask-app/application/templates/snips/filters-lang.html b/flask-app/application/templates/snips/filters-lang.html
index 178a32d..3af5d02 100644
--- a/flask-app/application/templates/snips/filters-lang.html
+++ b/flask-app/application/templates/snips/filters-lang.html
@@ -1,40 +1,59 @@
- {% if slang == 'target' %}
- {% set TRG_CHECKED = 'checked' %}
- {% elif slang == 'source' %}
- {% set SRC_CHECKED = 'checked' %}
+{% if slang == 'target' %}
+ {% set TRG_CHECKED = 'checked' %}
+{% elif slang == 'source' %}
+ {% set SRC_CHECKED = 'checked' %}
+{% else %}
+ {% set ALL_LANGS = 'checked' %}
+{% endif %}
+
+{% if scr == 'yes' %}
+ {% set SCR_YES = 'checked' %}
+{% else %}
+ {% set SCR_NO = 'checked' %}
+{% endif %}
+
+{% if config.USE_PROP_LISTS %}
+ {% if qtp == 'all' %}
+ {% set QTYPE_ALL = 'checked' %}
+ {% elif qtp == 'notes' %}
+ {% set QTYPE_NOTES = 'checked' %}
{% else %}
- {% set ALL_LANGS = 'checked' %}
+ {% set QTYPE_DEF = 'checked' %}
{% endif %}
-
-
-
- {% if scr == 'yes' %}
- {% set SCR_YES = 'checked' %}
- {% else %}
- {% set SCR_NO = 'checked' %}
- {% endif %}
-
-
-
+
+{% endif %}
diff --git a/flask-app/application/templates/sparql/search.sparql b/flask-app/application/templates/sparql/search.sparql
index 4e8a4f1..036b103 100644
--- a/flask-app/application/templates/sparql/search.sparql
+++ b/flask-app/application/templates/sparql/search.sparql
@@ -5,10 +5,12 @@
{% include 'sparql/_namespaces.sparql' %}
{% if config.USE_PROP_LISTS %}
- {% if queryAll == 'yes' %}
+ {% if qtp == 'all' %}
{% set prop_list = 'mesht:queryAll' %}
- {% elif onlyNotes == 'yes' %}
+ {% elif qtp == 'notes' %}
{% set prop_list = 'mesht:queryNotes' %}
+ {% elif qtp == 'def' %}
+ {% set prop_list = 'mesht:queryDef' %}
{% else %}
{% set prop_list = 'mesht:queryDef' %}
{% endif %}
diff --git a/flask-app/application/templates/sparql/tree-browse.sparql b/flask-app/application/templates/sparql/tree-browse.sparql
index 9c3a565..1c6914b 100644
--- a/flask-app/application/templates/sparql/tree-browse.sparql
+++ b/flask-app/application/templates/sparql/tree-browse.sparql
@@ -4,6 +4,12 @@
{% include 'sparql/_namespaces.sparql' ignore missing %}
+{% if config.USE_PROP_LISTS %}
+ {% set treeno_field = '' %}
+{% else %}
+ {% set treeno_field = 'meshv:identifier' %}
+{% endif %}
+
SELECT distinct ?tn ?label ?d ?type ?val ?active ?scn ?scnt ?ntx ?lockedBy {
{% if show == 'ntx' %} ## notTranslatable
@@ -37,10 +43,10 @@ SELECT distinct ?tn ?label ?d ?type ?val ?active ?scn ?scnt ?ntx ?lockedBy {
## status:{{ status }} show:{{ show }} ##
{% if toptn %}
## TOPTN ##
- (?tn ?score) text:query (meshv:identifier "{{ tn }} OR {{ toptn }} OR {{ toptn }}.*") .
+ (?tn ?score) text:query ({{ treeno_field }} "{{ tn }} OR {{ toptn }} OR {{ toptn }}.*") .
{% else %}
## TOP ##
- (?tn ?score) text:query (meshv:identifier "{{ top }}??.*") .
+ (?tn ?score) text:query ({{ treeno_field }} "{{ top }}??.*") .
{% endif %}
}
}
@@ -54,10 +60,10 @@ SELECT distinct ?tn ?label ?d ?type ?val ?active ?scn ?scnt ?ntx ?lockedBy {
## status:{{ status }} show:{{ show }} ##
{% if toptn %}
## TOPTN ##
- (?tn ?score) text:query (meshv:identifier "{{ tn }} OR {{ tn }}.??? OR {{ toptn }} OR {{ toptn }}.???" 1000) .
+ (?tn ?score) text:query ({{ treeno_field }} "{{ tn }} OR {{ tn }}.??? OR {{ toptn }} OR {{ toptn }}.???" 1000) .
{% else %}
## TOP ##
- (?tn ?score) text:query (meshv:identifier "{{ query }}" 1000) .
+ (?tn ?score) text:query ({{ treeno_field }} "{{ query }}" 1000) .
{% endif %}
}
}
@@ -132,4 +138,3 @@ SELECT distinct ?tn ?label ?d ?type ?val ?active ?scn ?scnt ?ntx ?lockedBy {
}
ORDER BY ?tn
-
diff --git a/flask-app/application/templates/sparql/tree.sparql b/flask-app/application/templates/sparql/tree.sparql
index 5db5936..249f8e6 100644
--- a/flask-app/application/templates/sparql/tree.sparql
+++ b/flask-app/application/templates/sparql/tree.sparql
@@ -9,7 +9,7 @@ WHERE {
mesh:{{ query }} meshv:treeNumber ?treeNum .
?treeNum meshv:parentTreeNumber ?parent .
BIND(CONCAT(str(?parent),'.???') as ?q) .
- (?tn ?score ?literal) text:query (?q) .
+ (?tn ?score) text:query (?q) .
?d meshv:treeNumber ?tn .
?d meshv:preferredConcept ?c .
}} UNION {
@@ -24,7 +24,7 @@ SELECT ?tn ?d ?c
WHERE {
mesh:{{ query }} meshv:treeNumber ?treeNum .
BIND(CONCAT(str(?treeNum),'.???') as ?q) .
- (?tn ?score ?literal) text:query (?q) .
+ (?tn ?score) text:query (?q) .
?d meshv:treeNumber ?tn .
?d meshv:preferredConcept ?c .
}} UNION {