NAMESPACE

# Generated by roxygen2: do not edit by hand

export(correlatePCs)
export(distro_expr)
export(geneprofiler)
export(genespca)
export(get_annotation)
export(get_annotation_orgdb)
export(hi_loadings)
export(limmaquickpca2go)
export(makeExampleDESeqDataSet_multifac)
export(pair_corr)
export(pca2go)
export(pcaExplorer)
export(pcaplot)
export(pcaplot3d)
export(pcascree)
export(plotPCcorrs)
export(topGOtable)
import(DESeq2)
import(GO.db)
import(SummarizedExperiment)
import(biomaRt)
import(ggplot2)
import(knitr)
import(methods)
import(plyr)
import(rmarkdown)
import(shiny)
import(shinydashboard)
import(threejs)
import(topGO)
importFrom(AnnotationDbi,Term)
importFrom(AnnotationDbi,mapIds)
importFrom(AnnotationDbi,select)
importFrom(DT,datatable)
importFrom(GenomicRanges,GRanges)
importFrom(IRanges,IRanges)
importFrom(NMF,aheatmap)
importFrom(S4Vectors,DataFrame)
importFrom(base64enc,dataURI)
importFrom(genefilter,rowVars)
importFrom(ggrepel,geom_label_repel)
importFrom(grDevices,colorRamp)
importFrom(grDevices,dev.off)
importFrom(grDevices,pdf)
importFrom(grDevices,rainbow)
importFrom(grDevices,rgb)
importFrom(heatmaply,heatmaply)
importFrom(limma,goana)
importFrom(limma,topGO)
importFrom(mosdef,gene_plot)
importFrom(mosdef,run_topGO)
importFrom(pheatmap,pheatmap)
importFrom(plotly,plotlyOutput)
importFrom(plotly,renderPlotly)
importFrom(scales,brewer_pal)
importFrom(scales,hue_pal)
importFrom(shiny,addResourcePath)
importFrom(shinyAce,aceAutocomplete)
importFrom(shinyAce,aceEditor)
importFrom(shinyAce,getAceModes)
importFrom(shinyAce,getAceThemes)
importFrom(shinyAce,updateAceEditor)
importFrom(shinyBS,bsCollapse)
importFrom(shinyBS,bsCollapsePanel)
importFrom(shinyBS,bsTooltip)
importFrom(tidyr,gather)
importMethodsFrom(GOstats,hyperGTest)
importMethodsFrom(GOstats,summary)