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Potential issue with very large chromosomes #282

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PSB-mibel opened this issue Sep 7, 2021 · 0 comments
Open

Potential issue with very large chromosomes #282

PSB-mibel opened this issue Sep 7, 2021 · 0 comments

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@PSB-mibel
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Hi,

it would appear that there might be an issue with large custom chromosomes:
for Arabidopsis thaliana (using custom chromosome lengths) everything works fine:
https://bioinformatics.psb.ugent.be/plaza/versions/plaza_v5_monocots/genome_mapping/wgmapping/go/GO%3A0009611/species/ath

However, for Triticum aestivum, the chromosomes are simply not displayed:
https://bioinformatics.psb.ugent.be/plaza/versions/plaza_v5_monocots/genome_mapping/wgmapping/go/GO%3A0009611/species/tae

I've been looking at the JSON data for quite a while now, and don't see any reason why the provided data wouldn't work.
So my only remaining idea is that there might be some internal issue with Ideogram.

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