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Hanging on setup #55

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vanosg opened this issue Sep 2, 2018 · 14 comments · May be fixed by #103
Closed

Hanging on setup #55

vanosg opened this issue Sep 2, 2018 · 14 comments · May be fixed by #103

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@vanosg
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vanosg commented Sep 2, 2018

Hi, on two different machines, docker-compose -f setup.yml up has hung at this point:

Creating elasticsearch ... done
Creating setup_logstash ... done
Creating setup_kibana   ... done
Attaching to setup_logstash, setup_kibana
setup_1  | setup_kibana           | -rw-rw-r-- 1 root root 1200 Sep  2 22:05 /usr/share/kibana/config/ca/ca.crt
setup_1  | setup_logstash         | -rw-rw-r-- 1 root root 1200 Sep  2 22:05 /usr/share/logstash/config/ca/ca.crt

Is the process done here, and I have to manually tear down the containers? Or have they truly hung? Host box is ubuntu 18.01. Please let me know if I can provide anything else, thanks!
@fxdgear
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fxdgear commented Sep 2, 2018

can you share the output of the elasticsearch container?

@vanosg
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vanosg commented Sep 3, 2018 

<snip>
setup_1  | setup_elasticsearch    |    creating: /config/ssl/docker-cluster/elasticsearch/
setup_1  | setup_elasticsearch    |   inflating: /config/ssl/docker-cluster/elasticsearch/elasticsearch.crt  
setup_1  | setup_elasticsearch    |   inflating: /config/ssl/docker-cluster/elasticsearch/elasticsearch.key  
setup_1  | setup_elasticsearch    |    creating: /config/ssl/docker-cluster/kibana/
setup_1  | setup_elasticsearch    |   inflating: /config/ssl/docker-cluster/kibana/kibana.crt  
setup_1  | setup_elasticsearch    |   inflating: /config/ssl/docker-cluster/kibana/kibana.key  
setup_1  | setup_elasticsearch    |    creating: /config/ssl/docker-cluster/logstash/
setup_1  | setup_elasticsearch    |   inflating: /config/ssl/docker-cluster/logstash/logstash.crt  
setup_1  | setup_elasticsearch    |   inflating: /config/ssl/docker-cluster/logstash/logstash.key  
setup_1  | setup_elasticsearch    | Move logstash certs to logstash config dir...
setup_1  | setup_elasticsearch    | Move kibana certs to kibana config dir...
setup_1  | setup_elasticsearch    | Move elasticsearch certs to elasticsearch config dir...
setup_1  | setup_elasticsearch exited with code 0

Then it goes into what I pasted before...

setup_1  | setup_elasticsearch exited with code 0
setup_1  | Found orphan containers (stack-docker_setup_1) for this project. If you removed or renamed this service in your compose file, you can run this command with the --remove-orphans flag to clean it up.
Starting elasticsearch ... done
Creating setup_kibana   ... done
Creating setup_logstash ... done
Attaching to setup_kibana, setup_logstash
setup_1  | setup_kibana           | -rw-rw-r-- 1 root root 1200 Sep  2 22:44 /usr/share/kibana/config/ca/ca.crt
setup_1  | setup_logstash         | -rw-rw-r-- 1 root root 1200 Sep  2 22:44 /usr/share/logstash/config/ca/ca.crt

@vanosg
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vanosg commented Sep 3, 2018

If it helps,

Client:
 Version:           18.06.1-ce
 API version:       1.38
 Go version:        go1.10.3
 Git commit:        e68fc7a
 Built:             Tue Aug 21 17:24:56 2018
 OS/Arch:           linux/amd64
 Experimental:      false

Server:
 Engine:
  Version:          18.06.1-ce
  API version:      1.38 (minimum version 1.12)
  Go version:       go1.10.3
  Git commit:       e68fc7a
  Built:            Tue Aug 21 17:23:21 2018
  OS/Arch:          linux/amd64
  Experimental:     false

docker-compose version 1.22.0, build f46880fe

@vanosg
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vanosg commented Sep 3, 2018

I just tried this a fifth time, and it appears to have worked... I don't think I did anything different (but I did re-clone the dir, just to start fresh). Sorry to false-alarm on this

@vanosg vanosg closed this as completed Sep 3, 2018
@fxdgear
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fxdgear commented Sep 3, 2018 via email

@Crysalist
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I am getting the same issue.

  • Downloaded the ZIP from the repo
  • Extracted it.
  • Installed newest docker-compose (v1.22.0)
  • Did the -setup command
  • hanging at :
    530ed487ab9_stack-docker-master_setup_1 | setup_kibana | -rw-rw-r-- 1 root root 1200 Sep 14 05:50 /usr/share/kibana/config/ca/ca.crt d530ed487ab9_stack-docker-master_setup_1 | setup_logstash | -rw-rw-r-- 1 root root 1200 Sep 14 05:50 /usr/share/logstash/config/ca/ca.crt

Then also

  • deleted all docker images
  • deleted all files
  • rinse and repeat of the above but still no luck

@Crysalist
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Seems the command :
sysctl -w vm.max_map_count=262144
did not take the first time around. Redid it also and now it works.

@rajiff
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rajiff commented Oct 7, 2018

I run it on mac, i did below to move past, hope it helps others

docker-machine ssh
sudo sysctl -w vm.max_map_count=262144

@ohing504
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ohing504 commented Nov 26, 2018 •
edited
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In my case, sysctl -w vm.max_map_count=262144 command not help.
I tried docker-compose -f setup.yml up multiple times, and it works rarely.

And I found out the codes on hanging in following codes:

stack-docker/scripts/setup-kibana.sh

Lines 18 to 20 in f9d13bd

while [[ "$(curl -u "elastic:${ELASTIC_PASSWORD}" --cacert $cacert -s -o /dev/null -w '%{http_code}' $es_url)" != "200" ]]; do
sleep 5
done

stack-docker/scripts/setup-logstash.sh

Lines 14 to 18 in f9d13bd

es_url=https://elasticsearch:9200
# Wait for Elasticsearch to start up before doing anything.
while [[ "$(curl -u "elastic:${ELASTIC_PASSWORD}" --cacert $cacert -s -o /dev/null -w '%{http_code}' $es_url)" != "200" ]]; do
sleep 5
done

My logs show Starting elasticsearch ... done but the response of above code is 000.
So, the setup scripts fall asleep...

$ ~/stack-docker$ docker-compose -f setup.yml up
Recreating stack-docker_setup_1_1f2213838db8 ... done
Attaching to stack-docker_setup_1_1f2213838db8
setup_1_1f2213838db8 | Found orphan containers (stack-docker_setup_1_1f2213838db8) for this project. If you removed or renamed this service in your compose file, you can run this command with the --remove-orphans flag to clean it up.
Creating setup_elasticsearch ... done
Attaching to setup_elasticsearch
setup_1_1f2213838db8 | setup_elasticsearch    | Determining if x-pack is installed...
setup_1_1f2213838db8 | setup_elasticsearch    | === CREATE Keystore ===
setup_1_1f2213838db8 | setup_elasticsearch    | Elastic password is: EhS5NuYLmy3yre9ief4HRg==
setup_1_1f2213838db8 | setup_elasticsearch    | Created elasticsearch keystore in /usr/share/elasticsearch/config
setup_1_1f2213838db8 | setup_elasticsearch    | Setting bootstrap.password...
setup_1_1f2213838db8 | setup_elasticsearch    | === CREATE SSL CERTS ===
setup_1_1f2213838db8 | setup_elasticsearch    | Remove old ca zip...
setup_1_1f2213838db8 | setup_elasticsearch    | Creating docker-cluster-ca.zip...
setup_1_1f2213838db8 | setup_elasticsearch    | CA directory exists, removing...
setup_1_1f2213838db8 | setup_elasticsearch    | Unzip ca files...
setup_1_1f2213838db8 | setup_elasticsearch    | Archive:  /config/ssl/docker-cluster-ca.zip
setup_1_1f2213838db8 | setup_elasticsearch    |    creating: /config/ssl/ca/
setup_1_1f2213838db8 | setup_elasticsearch    |   inflating: /config/ssl/ca/ca.crt
setup_1_1f2213838db8 | setup_elasticsearch    |   inflating: /config/ssl/ca/ca.key
setup_1_1f2213838db8 | setup_elasticsearch    | Remove old docker-cluster.zip zip...
setup_1_1f2213838db8 | setup_elasticsearch    | Create cluster certs zipfile...
setup_1_1f2213838db8 | setup_elasticsearch    | Unzipping cluster certs zipfile...
setup_1_1f2213838db8 | setup_elasticsearch    | Archive:  /config/ssl/docker-cluster.zip
setup_1_1f2213838db8 | setup_elasticsearch    |    creating: /config/ssl/docker-cluster/elasticsearch/
setup_1_1f2213838db8 | setup_elasticsearch    |   inflating: /config/ssl/docker-cluster/elasticsearch/elasticsearch.crt
setup_1_1f2213838db8 | setup_elasticsearch    |   inflating: /config/ssl/docker-cluster/elasticsearch/elasticsearch.key
setup_1_1f2213838db8 | setup_elasticsearch    |    creating: /config/ssl/docker-cluster/kibana/
setup_1_1f2213838db8 | setup_elasticsearch    |   inflating: /config/ssl/docker-cluster/kibana/kibana.crt
setup_1_1f2213838db8 | setup_elasticsearch    |   inflating: /config/ssl/docker-cluster/kibana/kibana.key
setup_1_1f2213838db8 | setup_elasticsearch    |    creating: /config/ssl/docker-cluster/logstash/
setup_1_1f2213838db8 | setup_elasticsearch    |   inflating: /config/ssl/docker-cluster/logstash/logstash.crt
setup_1_1f2213838db8 | setup_elasticsearch    |   inflating: /config/ssl/docker-cluster/logstash/logstash.key
setup_1_1f2213838db8 | setup_elasticsearch    | Move logstash certs to logstash config dir...
setup_1_1f2213838db8 | setup_elasticsearch    | Move kibana certs to kibana config dir...
setup_1_1f2213838db8 | setup_elasticsearch    | Move elasticsearch certs to elasticsearch config dir...
setup_1_1f2213838db8 | setup_elasticsearch exited with code 0
setup_1_1f2213838db8 | Found orphan containers (stack-docker_setup_1_1f2213838db8) for this project. If you removed or renamed this service in your compose file, you can run this command with the --remove-orphans flag to clean it up.
Starting elasticsearch ... done
Creating setup_logstash ... done
Creating setup_kibana   ... done
Attaching to setup_kibana, setup_logstash
setup_1_1f2213838db8 | setup_kibana           | -rw-rw-r-- 1 root root 1200 Nov 26 09:03 /usr/share/kibana/config/ca/ca.crt
setup_1_1f2213838db8 | setup_logstash         | -rw-rw-r-- 1 root root 1200 Nov 26 09:03 /usr/share/logstash/config/ca/ca.crt

My docker list:

$ docker ps
CONTAINER ID        IMAGE                                       COMMAND                  CREATED             STATUS              PORTS                NAMES
ef0bee2964c4        docker.elastic.co/logstash/logstash:6.3.0   "/usr/local/bin/dock…"   5 minutes ago       Up 4 minutes        5044/tcp, 9600/tcp   setup_logstash
0f579245ad17        docker.elastic.co/kibana/kibana:6.3.0       "/bin/bash -c 'cat /…"   5 minutes ago       Up 5 minutes        5601/tcp             setup_kibana
7622d92acdc3        docker/compose:1.21.2                       "/bin/ash -c 'cat ./…"   5 minutes ago       Up 5 minutes                             stack-docker_setup_1_1f2213838db8

@fxdgear
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fxdgear commented Nov 26, 2018

@ohing504

Can you please check the output of the elasticsearch container.

It looks like elasticsearch is failing to start for some reason.

@minhtd1981
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@ohing504

Can you please check the output of the elasticsearch container.

It looks like elasticsearch is failing to start for some reason.

I think I got the same issue. Here is the log:

[WARN ][o.e.h.n.Netty4HttpServerTransport] [STIiuSf] caught exception while handling client http traffic, closing connection [id: 0x80a4e5db, L:0.0.0.0/0.0.0.0:9200 ! R:/172.19.0.3:60480]
io.netty.handler.codec.DecoderException: javax.net.ssl.SSLHandshakeException: Received fatal alert: unknown_ca
        at io.netty.handler.codec.ByteToMessageDecoder.callDecode(ByteToMessageDecoder.java:472) ~[netty-codec-4.1.32.Final.jar:4.1.32.Final]
        at io.netty.handler.codec.ByteToMessageDecoder.channelRead(ByteToMessageDecoder.java:278) ~[netty-codec-4.1.32.Final.jar:4.1.32.Final]
        at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:362) [netty-transport-4.1.32.Final.jar:4.1.32.Final]
        at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:348) [netty-transport-4.1.32.Final.jar:4.1.32.Final]
        at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:340) [netty-transport-4.1.32.Final.jar:4.1.32.Final]
        at io.netty.channel.DefaultChannelPipeline$HeadContext.channelRead(DefaultChannelPipeline.java:1434) [netty-transport-4.1.32.Final.jar:4.1.32.Final]
        at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:362) [netty-transport-4.1.32.Final.jar:4.1.32.Final]
        at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:348) [netty-transport-4.1.32.Final.jar:4.1.32.Final]
        at io.netty.channel.DefaultChannelPipeline.fireChannelRead(DefaultChannelPipeline.java:965) [netty-transport-4.1.32.Final.jar:4.1.32.Final]
        at io.netty.channel.nio.AbstractNioByteChannel$NioByteUnsafe.read(AbstractNioByteChannel.java:163) [netty-transport-4.1.32.Final.jar:4.1.32.Final]
        at io.netty.channel.nio.NioEventLoop.processSelectedKey(NioEventLoop.java:656) [netty-transport-4.1.32.Final.jar:4.1.32.Final]
        at io.netty.channel.nio.NioEventLoop.processSelectedKeysPlain(NioEventLoop.java:556) [netty-transport-4.1.32.Final.jar:4.1.32.Final]
        at io.netty.channel.nio.NioEventLoop.processSelectedKeys(NioEventLoop.java:510) [netty-transport-4.1.32.Final.jar:4.1.32.Final]
        at io.netty.channel.nio.NioEventLoop.run(NioEventLoop.java:470) [netty-transport-4.1.32.Final.jar:4.1.32.Final]
        at io.netty.util.concurrent.SingleThreadEventExecutor$5.run(SingleThreadEventExecutor.java:909) [netty-common-4.1.32.Final.jar:4.1.32.Final]
        at java.lang.Thread.run(Thread.java:834) [?:?]
Caused by: javax.net.ssl.SSLHandshakeException: Received fatal alert: unknown_ca
        at sun.security.ssl.Alert.createSSLException(Alert.java:128) ~[?:?]
        at sun.security.ssl.Alert.createSSLException(Alert.java:117) ~[?:?]
        at sun.security.ssl.TransportContext.fatal(TransportContext.java:308) ~[?:?]
        at sun.security.ssl.Alert$AlertConsumer.consume(Alert.java:279) ~[?:?]
        at sun.security.ssl.TransportContext.dispatch(TransportContext.java:181) ~[?:?]
        at sun.security.ssl.SSLTransport.decode(SSLTransport.java:164) ~[?:?]
        at sun.security.ssl.SSLEngineImpl.decode(SSLEngineImpl.java:672) ~[?:?]
        at sun.security.ssl.SSLEngineImpl.readRecord(SSLEngineImpl.java:627) ~[?:?]
        at sun.security.ssl.SSLEngineImpl.unwrap(SSLEngineImpl.java:443) ~[?:?]
        at sun.security.ssl.SSLEngineImpl.unwrap(SSLEngineImpl.java:422) ~[?:?]
        at javax.net.ssl.SSLEngine.unwrap(SSLEngine.java:634) ~[?:?]
        at io.netty.handler.ssl.SslHandler$SslEngineType$3.unwrap(SslHandler.java:295) ~[netty-handler-4.1.32.Final.jar:4.1.32.Final]
        at io.netty.handler.ssl.SslHandler.unwrap(SslHandler.java:1301) ~[netty-handler-4.1.32.Final.jar:4.1.32.Final]
        at io.netty.handler.ssl.SslHandler.decodeJdkCompatible(SslHandler.java:1203) ~[netty-handler-4.1.32.Final.jar:4.1.32.Final]
        at io.netty.handler.ssl.SslHandler.decode(SslHandler.java:1247) ~[netty-handler-4.1.32.Final.jar:4.1.32.Final]
        at io.netty.handler.codec.ByteToMessageDecoder.decodeRemovalReentryProtection(ByteToMessageDecoder.java:502) ~[netty-codec-4.1.32.Final.jar:4.1.32.Final]
        at io.netty.handler.codec.ByteToMessageDecoder.callDecode(ByteToMessageDecoder.java:441) ~[netty-codec-4.1.32.Final.jar:4.1.32.Final]
        ... 15 more

@jabaa
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jabaa commented Jun 28, 2019

Why is this issue closed? I have the same problem. Is there some solution for this? Can't finish the setup.

@BeunHaas34
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same issue here

@gnunesmoura
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I'm having the same issue.

@zentale zentale mentioned this issue Nov 26, 2019
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Fixing hanging issue - adding ulimits to elasticsearch zentale/stack-docker
9 participants
@fxdgear @rajiff @vanosg @Crysalist @BeunHaas34 @jabaa @ohing504 @gnunesmoura @minhtd1981