nanoaod_job.sub

# run miniAOD -> ntuple conversion (full ntuple)
# requires active proxy -> voms-proxy-init

executable              = run.sh
universe                = docker
log                     = logs/0003/job_$(cluster)_$(Process).log
output                  = logs/0003/out_$(cluster)_$(Process).txt
error                   = logs/0003/err_$(cluster)_$(Process).txt
should_transfer_files   = Yes

# /tmp/x509up_u7652 is ekauffma's proxy 
# filenames_*.txt (change to appropriate filename) contains the file names in the directory combined-data
# split-datasets contains text files with lists of ROOT files to convert to nanoAOD format (all ROOT files in one text file are combined)
transfer_input_files    = /tmp/x509up_u7652, filenames.txt, split-datasets, nanoaod15_cfg.py 
when_to_transfer_output = ON_EXIT
#transfer_output_files   = 
+WantDocker             = true
+DockerImage            = "unlhcc/osg-wn-el7"
docker_image            = "unlhcc/osg-wn-el7"
request_memory          = 4000

queue arguments from filenames.txt